| Clone Name | bags12f23 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ534445.1|HVU534445 Hordeum vulgare mRNA for hexose transporter (stp1 gene) Length = 2614 Score = 1166 bits (588), Expect = 0.0 Identities = 595/596 (99%), Gaps = 1/596 (0%) Strand = Plus / Plus Query: 1 gtcgggtggtaggattcggcggccatgtcgtcgggcgccgtgctggtcgccatagcggcg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 59 gtcgggtggtaggattcggcggccatgtcgtcgggcgccgtgctggtcgccatagcggcg 118 Query: 61 tccatcgggaacctgctgcaggggtgggataatgcgaccattgcaggtgccgtcctgtac 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119 tccatcgggaacctgctgcaggggtgggataatgcgaccattgcaggtgccgtcctgtac 178 Query: 121 ataaagaaggagttcagcctggagacccagcccttgatcgagggcctcatcgtggccatg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 179 ataaagaaggagttcagcctggagacccagcccttgatcgagggcctcatcgtggccatg 238 Query: 181 tcgctcatcggagcgacggttatcacgacgttctccggggcggtggctgacgctgttggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 239 tcgctcatcggagcgacggttatcacgacgttctccggggcggtggctgacgctgttggt 298 Query: 241 aggcggcccctgctgatcgcctcgtctgtcctctactttgtcagtggcctggtgatgctc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 299 aggcggcccctgctgatcgcctcgtctgtcctctactttgtcagtggcctggtgatgctc 358 Query: 301 tgggcgcccaacgtctatgtgttgctcttggccaggctcatcgacgggttcggtatcggt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 359 tgggcgcccaacgtctatgtgttgctcttggccaggctcatcgacgggttcggtatcggt 418 Query: 361 ttggcagtcacccttgtccctctgtacatttcggagaccgccccgactgacattagaggg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 419 ttggcagtcacccttgtccctctgtacatttcggagaccgccccgactgacattagaggg 478 Query: 421 ctgctgaacacgctgccgcagttcagtgggtcaggagggatgttcctttcttactgcatg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 479 ctgctgaacacgctgccgcagttcagtgggtcaggagggatgttcctttcttactgcatg 538 Query: 481 gtgtttaccatgtccctcatgccgcagcctgactggagaatcatgcttggggttttgtcg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 539 gtgtttaccatgtccctcatgccgcagcctgactggagaatcatgcttggggttttgtcg 598 Query: 541 atcccgtcgcttatgtattttgcattgactgtcttttatttgccccgagtcgccca 596 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 599 atcccgtcgcttatgtattttgcattgactgtcttttatttg-cccgagtcgccca 653
>emb|AJ534446.1|HVU534446 Hordeum vulgare mRNA for sugar transporter (stp2 gene) Length = 2516 Score = 575 bits (290), Expect = e-161 Identities = 293/294 (99%) Strand = Plus / Plus Query: 292 gtgatgctctgggcgcccaacgtctatgtgttgctcttggccaggctcatcgacgggttc 351 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 290 gtgatgctctgggcgcccaacgtctatgtgttgctcttggccaggctcatcgacgggttc 349 Query: 352 ggtatcggtttggcagtcacccttgtccctctgtacatttcggagaccgccccgactgac 411 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 350 ggtatcggtttggcagtcacccttgtccctctgtacatttcggagaccgccccgactgac 409 Query: 412 attagagggctgctgaacacgctgccgcagttcagtgggtcaggagggatgttcctttct 471 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 410 attagagggctgctgaacacgctgccgcagttcagtgggtcaggagggatgttcctttct 469 Query: 472 tactgcatggtgtttaccatgtccctcatgccgcagcctgactggagaatcatgcttggg 531 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 470 tactgcatggtgtttaccatgtccctcatgccgcagcctgactggagaatcatgctgggg 529 Query: 532 gttttgtcgatcccgtcgcttatgtattttgcattgactgtcttttatttgccc 585 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 530 gttttgtcgatcccgtcgcttatgtattttgcattgactgtcttttatttgccc 583
>ref|NM_197573.1| Oryza sativa (japonica cultivar-group) putative sugar transporter (OSJNBb0064P21.3), mRNA Length = 2438 Score = 500 bits (252), Expect = e-138 Identities = 494/574 (86%), Gaps = 3/574 (0%) Strand = Plus / Plus Query: 5 ggtggtaggattcggcggccatgtcgtcgggcgccgtgctggtcgccatagcggcgtcca 64 ||||||| |||||| |||||||| || |||||||||||||||||||| ||||| |||| Sbjct: 154 ggtggtaagattcgccggccatggcg---ggcgccgtgctggtcgccatcgcggcctcca 210 Query: 65 tcgggaacctgctgcaggggtgggataatgcgaccattgcaggtgccgtcctgtacataa 124 |||| ||| |||||||||| ||||||||||| |||||||||||||| || |||||||| | Sbjct: 211 tcggcaacttgctgcagggctgggataatgcaaccattgcaggtgcggtactgtacatca 270 Query: 125 agaaggagttcagcctggagacccagcccttgatcgagggcctcatcgtggccatgtcgc 184 ||||||| |||| | || ||| | ||||| | ||||| ||||| |||||||||||||||| Sbjct: 271 agaaggaattcaacttgcagagcgagccccttatcgaaggcctgatcgtggccatgtcgc 330 Query: 185 tcatcggagcgacggttatcacgacgttctccggggcggtggctgacgctgttggtaggc 244 |||| || |||||| | |||||||||||||| || || |||||||| || ||||||||| Sbjct: 331 tcattggggcgacgatcatcacgacgttctctggagcagtggctgattcttttggtaggc 390 Query: 245 ggcccctgctgatcgcctcgtctgtcctctactttgtcagtggcctggtgatgctctggg 304 ||||| |||||||||| ||| |||||||||||||||| ||||| || |||||||| |||| Sbjct: 391 ggcccatgctgatcgcgtcggctgtcctctactttgttagtgggctagtgatgctttggg 450 Query: 305 cgcccaacgtctatgtgttgctcttggccaggctcatcgacgggttcggtatcggtttgg 364 |||| || || ||||||||||||||||| |||||||| ||||||||||| |||||||||| Sbjct: 451 cgccaaatgtgtatgtgttgctcttggcgaggctcattgacgggttcgggatcggtttgg 510 Query: 365 cagtcacccttgtccctctgtacatttcggagaccgccccgactgacattagagggctgc 424 | ||||| ||||| || ||||||| || ||||| |||||||| ||||| ||||| |||| Sbjct: 511 ctgtcacgcttgtaccattgtacatctctgagactgccccgacggacatcagaggactgc 570 Query: 425 tgaacacgctgccgcagttcagtgggtcaggagggatgttcctttcttactgcatggtgt 484 | |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| | Sbjct: 571 taaacacgctgccgcagttcagtgggtctggagggatgttcctttcatactgcatggtat 630 Query: 485 ttaccatgtccctcatgccgcagcctgactggagaatcatgcttggggttttgtcgatcc 544 || ||||||||||||||| ||||| || ||||| ||||||||||| ||| | || || | Sbjct: 631 ttggcatgtccctcatgccacagccagattggaggatcatgcttggcgttctatcaatac 690 Query: 545 cgtcgcttatgtattttgcattgactgtctttta 578 | || ||||| || ||||||||||| ||||||| Sbjct: 691 catcacttatatactttgcattgaccatctttta 724
>dbj|AK102640.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033100A10, full insert sequence Length = 2800 Score = 500 bits (252), Expect = e-138 Identities = 494/574 (86%), Gaps = 3/574 (0%) Strand = Plus / Plus Query: 5 ggtggtaggattcggcggccatgtcgtcgggcgccgtgctggtcgccatagcggcgtcca 64 ||||||| |||||| |||||||| || |||||||||||||||||||| ||||| |||| Sbjct: 185 ggtggtaagattcgccggccatggcg---ggcgccgtgctggtcgccatcgcggcctcca 241 Query: 65 tcgggaacctgctgcaggggtgggataatgcgaccattgcaggtgccgtcctgtacataa 124 |||| ||| |||||||||| ||||||||||| |||||||||||||| || |||||||| | Sbjct: 242 tcggcaacttgctgcagggctgggataatgcaaccattgcaggtgcggtactgtacatca 301 Query: 125 agaaggagttcagcctggagacccagcccttgatcgagggcctcatcgtggccatgtcgc 184 ||||||| |||| | || ||| | ||||| | ||||| ||||| |||||||||||||||| Sbjct: 302 agaaggaattcaacttgcagagcgagccccttatcgaaggcctgatcgtggccatgtcgc 361 Query: 185 tcatcggagcgacggttatcacgacgttctccggggcggtggctgacgctgttggtaggc 244 |||| || |||||| | |||||||||||||| || || |||||||| || ||||||||| Sbjct: 362 tcattggggcgacgatcatcacgacgttctctggagcagtggctgattcttttggtaggc 421 Query: 245 ggcccctgctgatcgcctcgtctgtcctctactttgtcagtggcctggtgatgctctggg 304 ||||| |||||||||| ||| |||||||||||||||| ||||| || |||||||| |||| Sbjct: 422 ggcccatgctgatcgcgtcggctgtcctctactttgttagtgggctagtgatgctttggg 481 Query: 305 cgcccaacgtctatgtgttgctcttggccaggctcatcgacgggttcggtatcggtttgg 364 |||| || || ||||||||||||||||| |||||||| ||||||||||| |||||||||| Sbjct: 482 cgccaaatgtgtatgtgttgctcttggcgaggctcattgacgggttcgggatcggtttgg 541 Query: 365 cagtcacccttgtccctctgtacatttcggagaccgccccgactgacattagagggctgc 424 | ||||| ||||| || ||||||| || ||||| |||||||| ||||| ||||| |||| Sbjct: 542 ctgtcacgcttgtaccattgtacatctctgagactgccccgacggacatcagaggactgc 601 Query: 425 tgaacacgctgccgcagttcagtgggtcaggagggatgttcctttcttactgcatggtgt 484 | |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| | Sbjct: 602 taaacacgctgccgcagttcagtgggtctggagggatgttcctttcatactgcatggtat 661 Query: 485 ttaccatgtccctcatgccgcagcctgactggagaatcatgcttggggttttgtcgatcc 544 || ||||||||||||||| ||||| || ||||| ||||||||||| ||| | || || | Sbjct: 662 ttggcatgtccctcatgccacagccagattggaggatcatgcttggcgttctatcaatac 721 Query: 545 cgtcgcttatgtattttgcattgactgtctttta 578 | || ||||| || ||||||||||| ||||||| Sbjct: 722 catcacttatatactttgcattgaccatctttta 755
>gb|AC073166.7| Oryza sativa chromosome 10 BAC OSJNBb0064P21 genomic sequence, complete sequence Length = 142114 Score = 402 bits (203), Expect = e-109 Identities = 407/475 (85%) Strand = Plus / Plus Query: 104 caggtgccgtcctgtacataaagaaggagttcagcctggagacccagcccttgatcgagg 163 ||||||| || |||||||| |||||||| |||| | || ||| | ||||| | ||||| | Sbjct: 35283 caggtgcggtactgtacatcaagaaggaattcaacttgcagagcgagccccttatcgaag 35342 Query: 164 gcctcatcgtggccatgtcgctcatcggagcgacggttatcacgacgttctccggggcgg 223 |||| |||||||||||||||||||| || |||||| | |||||||||||||| || || | Sbjct: 35343 gcctgatcgtggccatgtcgctcattggggcgacgatcatcacgacgttctctggagcag 35402 Query: 224 tggctgacgctgttggtaggcggcccctgctgatcgcctcgtctgtcctctactttgtca 283 ||||||| || |||||||||||||| |||||||||| ||| |||||||||||||||| | Sbjct: 35403 tggctgattcttttggtaggcggcccatgctgatcgcgtcggctgtcctctactttgtta 35462 Query: 284 gtggcctggtgatgctctgggcgcccaacgtctatgtgttgctcttggccaggctcatcg 343 |||| || |||||||| |||||||| || || ||||||||||||||||| |||||||| | Sbjct: 35463 gtgggctagtgatgctttgggcgccaaatgtgtatgtgttgctcttggcgaggctcattg 35522 Query: 344 acgggttcggtatcggtttggcagtcacccttgtccctctgtacatttcggagaccgccc 403 |||||||||| ||||||||||| ||||| ||||| || ||||||| || ||||| |||| Sbjct: 35523 acgggttcgggatcggtttggctgtcacgcttgtaccattgtacatctctgagactgccc 35582 Query: 404 cgactgacattagagggctgctgaacacgctgccgcagttcagtgggtcaggagggatgt 463 |||| ||||| ||||| ||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 35583 cgacggacatcagaggactgctaaacacgctgccgcagttcagtgggtctggagggatgt 35642 Query: 464 tcctttcttactgcatggtgtttaccatgtccctcatgccgcagcctgactggagaatca 523 ||||||| ||||||||||| ||| ||||||||||||||| ||||| || ||||| |||| Sbjct: 35643 tcctttcatactgcatggtatttggcatgtccctcatgccacagccagattggaggatca 35702 Query: 524 tgcttggggttttgtcgatcccgtcgcttatgtattttgcattgactgtctttta 578 ||||||| ||| | || || || || ||||| || ||||||||||| ||||||| Sbjct: 35703 tgcttggcgttctatcaataccatcacttatatactttgcattgaccatctttta 35757 Score = 105 bits (53), Expect = 2e-19 Identities = 71/77 (92%) Strand = Plus / Plus Query: 32 cgggcgccgtgctggtcgccatagcggcgtccatcgggaacctgctgcaggggtgggata 91 |||||||||||||||||||||| ||||| |||||||| ||| |||||||||| ||||||| Sbjct: 34820 cgggcgccgtgctggtcgccatcgcggcctccatcggcaacttgctgcagggctgggata 34879 Query: 92 atgcgaccattgcaggt 108 |||| |||||||||||| Sbjct: 34880 atgcaaccattgcaggt 34896
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 402 bits (203), Expect = e-109 Identities = 407/475 (85%) Strand = Plus / Plus Query: 104 caggtgccgtcctgtacataaagaaggagttcagcctggagacccagcccttgatcgagg 163 ||||||| || |||||||| |||||||| |||| | || ||| | ||||| | ||||| | Sbjct: 20529993 caggtgcggtactgtacatcaagaaggaattcaacttgcagagcgagccccttatcgaag 20530052 Query: 164 gcctcatcgtggccatgtcgctcatcggagcgacggttatcacgacgttctccggggcgg 223 |||| |||||||||||||||||||| || |||||| | |||||||||||||| || || | Sbjct: 20530053 gcctgatcgtggccatgtcgctcattggggcgacgatcatcacgacgttctctggagcag 20530112 Query: 224 tggctgacgctgttggtaggcggcccctgctgatcgcctcgtctgtcctctactttgtca 283 ||||||| || |||||||||||||| |||||||||| ||| |||||||||||||||| | Sbjct: 20530113 tggctgattcttttggtaggcggcccatgctgatcgcgtcggctgtcctctactttgtta 20530172 Query: 284 gtggcctggtgatgctctgggcgcccaacgtctatgtgttgctcttggccaggctcatcg 343 |||| || |||||||| |||||||| || || ||||||||||||||||| |||||||| | Sbjct: 20530173 gtgggctagtgatgctttgggcgccaaatgtgtatgtgttgctcttggcgaggctcattg 20530232 Query: 344 acgggttcggtatcggtttggcagtcacccttgtccctctgtacatttcggagaccgccc 403 |||||||||| ||||||||||| ||||| ||||| || ||||||| || ||||| |||| Sbjct: 20530233 acgggttcgggatcggtttggctgtcacgcttgtaccattgtacatctctgagactgccc 20530292 Query: 404 cgactgacattagagggctgctgaacacgctgccgcagttcagtgggtcaggagggatgt 463 |||| ||||| ||||| ||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 20530293 cgacggacatcagaggactgctaaacacgctgccgcagttcagtgggtctggagggatgt 20530352 Query: 464 tcctttcttactgcatggtgtttaccatgtccctcatgccgcagcctgactggagaatca 523 ||||||| ||||||||||| ||| ||||||||||||||| ||||| || ||||| |||| Sbjct: 20530353 tcctttcatactgcatggtatttggcatgtccctcatgccacagccagattggaggatca 20530412 Query: 524 tgcttggggttttgtcgatcccgtcgcttatgtattttgcattgactgtctttta 578 ||||||| ||| | || || || || ||||| || ||||||||||| ||||||| Sbjct: 20530413 tgcttggcgttctatcaataccatcacttatatactttgcattgaccatctttta 20530467 Score = 105 bits (53), Expect = 2e-19 Identities = 71/77 (92%) Strand = Plus / Plus Query: 32 cgggcgccgtgctggtcgccatagcggcgtccatcgggaacctgctgcaggggtgggata 91 |||||||||||||||||||||| ||||| |||||||| ||| |||||||||| ||||||| Sbjct: 20529530 cgggcgccgtgctggtcgccatcgcggcctccatcggcaacttgctgcagggctgggata 20529589 Query: 92 atgcgaccattgcaggt 108 |||| |||||||||||| Sbjct: 20529590 atgcaaccattgcaggt 20529606
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 402 bits (203), Expect = e-109 Identities = 407/475 (85%) Strand = Plus / Plus Query: 104 caggtgccgtcctgtacataaagaaggagttcagcctggagacccagcccttgatcgagg 163 ||||||| || |||||||| |||||||| |||| | || ||| | ||||| | ||||| | Sbjct: 20541265 caggtgcggtactgtacatcaagaaggaattcaacttgcagagcgagccccttatcgaag 20541324 Query: 164 gcctcatcgtggccatgtcgctcatcggagcgacggttatcacgacgttctccggggcgg 223 |||| |||||||||||||||||||| || |||||| | |||||||||||||| || || | Sbjct: 20541325 gcctgatcgtggccatgtcgctcattggggcgacgatcatcacgacgttctctggagcag 20541384 Query: 224 tggctgacgctgttggtaggcggcccctgctgatcgcctcgtctgtcctctactttgtca 283 ||||||| || |||||||||||||| |||||||||| ||| |||||||||||||||| | Sbjct: 20541385 tggctgattcttttggtaggcggcccatgctgatcgcgtcggctgtcctctactttgtta 20541444 Query: 284 gtggcctggtgatgctctgggcgcccaacgtctatgtgttgctcttggccaggctcatcg 343 |||| || |||||||| |||||||| || || ||||||||||||||||| |||||||| | Sbjct: 20541445 gtgggctagtgatgctttgggcgccaaatgtgtatgtgttgctcttggcgaggctcattg 20541504 Query: 344 acgggttcggtatcggtttggcagtcacccttgtccctctgtacatttcggagaccgccc 403 |||||||||| ||||||||||| ||||| ||||| || ||||||| || ||||| |||| Sbjct: 20541505 acgggttcgggatcggtttggctgtcacgcttgtaccattgtacatctctgagactgccc 20541564 Query: 404 cgactgacattagagggctgctgaacacgctgccgcagttcagtgggtcaggagggatgt 463 |||| ||||| ||||| ||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 20541565 cgacggacatcagaggactgctaaacacgctgccgcagttcagtgggtctggagggatgt 20541624 Query: 464 tcctttcttactgcatggtgtttaccatgtccctcatgccgcagcctgactggagaatca 523 ||||||| ||||||||||| ||| ||||||||||||||| ||||| || ||||| |||| Sbjct: 20541625 tcctttcatactgcatggtatttggcatgtccctcatgccacagccagattggaggatca 20541684 Query: 524 tgcttggggttttgtcgatcccgtcgcttatgtattttgcattgactgtctttta 578 ||||||| ||| | || || || || ||||| || ||||||||||| ||||||| Sbjct: 20541685 tgcttggcgttctatcaataccatcacttatatactttgcattgaccatctttta 20541739 Score = 105 bits (53), Expect = 2e-19 Identities = 71/77 (92%) Strand = Plus / Plus Query: 32 cgggcgccgtgctggtcgccatagcggcgtccatcgggaacctgctgcaggggtgggata 91 |||||||||||||||||||||| ||||| |||||||| ||| |||||||||| ||||||| Sbjct: 20540802 cgggcgccgtgctggtcgccatcgcggcctccatcggcaacttgctgcagggctgggata 20540861 Query: 92 atgcgaccattgcaggt 108 |||| |||||||||||| Sbjct: 20540862 atgcaaccattgcaggt 20540878
>dbj|AK065191.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002E10, full insert sequence Length = 2368 Score = 345 bits (174), Expect = 1e-91 Identities = 333/386 (86%) Strand = Plus / Plus Query: 193 gcgacggttatcacgacgttctccggggcggtggctgacgctgttggtaggcggcccctg 252 |||||| | |||||||||||||| || || |||||||| || |||||||||||||| || Sbjct: 8 gcgacgatcatcacgacgttctctggagcagtggctgattcttttggtaggcggcccatg 67 Query: 253 ctgatcgcctcgtctgtcctctactttgtcagtggcctggtgatgctctgggcgcccaac 312 |||||||| ||| |||||||||||||||| ||||| || |||||||| |||||||| || Sbjct: 68 ctgatcgcgtcggctgtcctctactttgttagtgggctagtgatgctttgggcgccaaat 127 Query: 313 gtctatgtgttgctcttggccaggctcatcgacgggttcggtatcggtttggcagtcacc 372 || ||||||||||||||||| |||||||| ||||||||||| ||||||||||| ||||| Sbjct: 128 gtgtatgtgttgctcttggcgaggctcattgacgggttcgggatcggtttggctgtcacg 187 Query: 373 cttgtccctctgtacatttcggagaccgccccgactgacattagagggctgctgaacacg 432 ||||| || ||||||| || ||||| |||||||| ||||| ||||| ||||| |||||| Sbjct: 188 cttgtaccattgtacatctctgagactgccccgacggacatcagaggactgctaaacacg 247 Query: 433 ctgccgcagttcagtgggtcaggagggatgttcctttcttactgcatggtgtttaccatg 492 |||||||||||||||||||| ||||||||||||||||| ||||||||||| ||| |||| Sbjct: 248 ctgccgcagttcagtgggtctggagggatgttcctttcatactgcatggtatttggcatg 307 Query: 493 tccctcatgccgcagcctgactggagaatcatgcttggggttttgtcgatcccgtcgctt 552 ||||||||||| ||||| || ||||| ||||||||||| ||| | || || || || ||| Sbjct: 308 tccctcatgccacagccagattggaggatcatgcttggcgttctatcaataccatcactt 367 Query: 553 atgtattttgcattgactgtctttta 578 || || ||||||||||| ||||||| Sbjct: 368 atatactttgcattgaccatctttta 393
>ref|XM_464773.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2934 Score = 93.7 bits (47), Expect = 6e-16 Identities = 80/91 (87%) Strand = Plus / Plus Query: 46 gtcgccatagcggcgtccatcgggaacctgctgcaggggtgggataatgcgaccattgca 105 ||||| || ||||| |||||||| |||||||||||||| ||||| ||||| ||||||||| Sbjct: 308 gtcgcaatcgcggcctccatcggcaacctgctgcagggatgggacaatgccaccattgca 367 Query: 106 ggtgccgtcctgtacataaagaaggagttca 136 ||||| || || |||||||||||||| |||| Sbjct: 368 ggtgctgtactatacataaagaaggaattca 398 Score = 91.7 bits (46), Expect = 2e-15 Identities = 148/182 (81%) Strand = Plus / Plus Query: 349 ttcggtatcggtttggcagtcacccttgtccctctgtacatttcggagaccgccccgact 408 ||||| ||||| ||||| ||||| ||||| ||| ||||||| || ||||| || || | Sbjct: 611 ttcggcatcggcttggctgtcacacttgtacctttgtacatctcagagacagctccttca 670 Query: 409 gacattagagggctgctgaacacgctgccgcagttcagtgggtcaggagggatgttcctt 468 || || || || ||||||| || ||||| ||||||||||||||||||||||||||| | Sbjct: 671 gagatcaggggtttgctgaatacactgccacagttcagtgggtcaggagggatgttcttg 730 Query: 469 tcttactgcatggtgtttaccatgtccctcatgccgcagcctgactggagaatcatgctt 528 || ||||||||||||||| ||||| || ||||| |||||||||||||| |||||| Sbjct: 731 tcctactgcatggtgtttgggatgtcactgttgccgtcacctgactggagaattatgctt 790 Query: 529 gg 530 || Sbjct: 791 gg 792
>dbj|AK120560.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013132C18, full insert sequence Length = 2934 Score = 93.7 bits (47), Expect = 6e-16 Identities = 80/91 (87%) Strand = Plus / Plus Query: 46 gtcgccatagcggcgtccatcgggaacctgctgcaggggtgggataatgcgaccattgca 105 ||||| || ||||| |||||||| |||||||||||||| ||||| ||||| ||||||||| Sbjct: 307 gtcgcaatcgcggcctccatcggcaacctgctgcagggatgggacaatgccaccattgca 366 Query: 106 ggtgccgtcctgtacataaagaaggagttca 136 ||||| || || |||||||||||||| |||| Sbjct: 367 ggtgctgtactatacataaagaaggaattca 397 Score = 91.7 bits (46), Expect = 2e-15 Identities = 148/182 (81%) Strand = Plus / Plus Query: 349 ttcggtatcggtttggcagtcacccttgtccctctgtacatttcggagaccgccccgact 408 ||||| ||||| ||||| ||||| ||||| ||| ||||||| || ||||| || || | Sbjct: 610 ttcggcatcggcttggctgtcacacttgtacctttgtacatctcagagacagctccttca 669 Query: 409 gacattagagggctgctgaacacgctgccgcagttcagtgggtcaggagggatgttcctt 468 || || || || ||||||| || ||||| ||||||||||||||||||||||||||| | Sbjct: 670 gagatcaggggtttgctgaatacactgccacagttcagtgggtcaggagggatgttcttg 729 Query: 469 tcttactgcatggtgtttaccatgtccctcatgccgcagcctgactggagaatcatgctt 528 || ||||||||||||||| ||||| || ||||| |||||||||||||| |||||| Sbjct: 730 tcctactgcatggtgtttgggatgtcactgttgccgtcacctgactggagaattatgctt 789 Query: 529 gg 530 || Sbjct: 790 gg 791
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 91.7 bits (46), Expect = 2e-15 Identities = 148/182 (81%) Strand = Plus / Plus Query: 349 ttcggtatcggtttggcagtcacccttgtccctctgtacatttcggagaccgccccgact 408 ||||| ||||| ||||| ||||| ||||| ||| ||||||| || ||||| || || | Sbjct: 7273733 ttcggcatcggcttggctgtcacacttgtacctttgtacatctcagagacagctccttca 7273792 Query: 409 gacattagagggctgctgaacacgctgccgcagttcagtgggtcaggagggatgttcctt 468 || || || || ||||||| || ||||| ||||||||||||||||||||||||||| | Sbjct: 7273793 gagatcaggggtttgctgaatacactgccacagttcagtgggtcaggagggatgttcttg 7273852 Query: 469 tcttactgcatggtgtttaccatgtccctcatgccgcagcctgactggagaatcatgctt 528 || ||||||||||||||| ||||| || ||||| |||||||||||||| |||||| Sbjct: 7273853 tcctactgcatggtgtttgggatgtcactgttgccgtcacctgactggagaattatgctt 7273912 Query: 529 gg 530 || Sbjct: 7273913 gg 7273914 Score = 69.9 bits (35), Expect = 9e-09 Identities = 56/63 (88%) Strand = Plus / Plus Query: 46 gtcgccatagcggcgtccatcgggaacctgctgcaggggtgggataatgcgaccattgca 105 ||||| || ||||| |||||||| |||||||||||||| ||||| ||||| ||||||||| Sbjct: 7272971 gtcgcaatcgcggcctccatcggcaacctgctgcagggatgggacaatgccaccattgca 7273030 Query: 106 ggt 108 ||| Sbjct: 7273031 ggt 7273033
>dbj|AP005756.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0035N08 Length = 136267 Score = 91.7 bits (46), Expect = 2e-15 Identities = 148/182 (81%) Strand = Plus / Plus Query: 349 ttcggtatcggtttggcagtcacccttgtccctctgtacatttcggagaccgccccgact 408 ||||| ||||| ||||| ||||| ||||| ||| ||||||| || ||||| || || | Sbjct: 49541 ttcggcatcggcttggctgtcacacttgtacctttgtacatctcagagacagctccttca 49600 Query: 409 gacattagagggctgctgaacacgctgccgcagttcagtgggtcaggagggatgttcctt 468 || || || || ||||||| || ||||| ||||||||||||||||||||||||||| | Sbjct: 49601 gagatcaggggtttgctgaatacactgccacagttcagtgggtcaggagggatgttcttg 49660 Query: 469 tcttactgcatggtgtttaccatgtccctcatgccgcagcctgactggagaatcatgctt 528 || ||||||||||||||| ||||| || ||||| |||||||||||||| |||||| Sbjct: 49661 tcctactgcatggtgtttgggatgtcactgttgccgtcacctgactggagaattatgctt 49720 Query: 529 gg 530 || Sbjct: 49721 gg 49722 Score = 69.9 bits (35), Expect = 9e-09 Identities = 56/63 (88%) Strand = Plus / Plus Query: 46 gtcgccatagcggcgtccatcgggaacctgctgcaggggtgggataatgcgaccattgca 105 ||||| || ||||| |||||||| |||||||||||||| ||||| ||||| ||||||||| Sbjct: 48779 gtcgcaatcgcggcctccatcggcaacctgctgcagggatgggacaatgccaccattgca 48838 Query: 106 ggt 108 ||| Sbjct: 48839 ggt 48841
>dbj|AK099716.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013086B19, full insert sequence Length = 2378 Score = 91.7 bits (46), Expect = 2e-15 Identities = 148/182 (81%) Strand = Plus / Plus Query: 349 ttcggtatcggtttggcagtcacccttgtccctctgtacatttcggagaccgccccgact 408 ||||| ||||| ||||| ||||| ||||| ||| ||||||| || ||||| || || | Sbjct: 121 ttcggcatcggcttggctgtcacacttgtacctttgtacatctcagagacagctccttca 180 Query: 409 gacattagagggctgctgaacacgctgccgcagttcagtgggtcaggagggatgttcctt 468 || || || || ||||||| || ||||| ||||||||||||||||||||||||||| | Sbjct: 181 gagatcaggggtttgctgaatacactgccacagttcagtgggtcaggagggatgttcttg 240 Query: 469 tcttactgcatggtgtttaccatgtccctcatgccgcagcctgactggagaatcatgctt 528 || ||||||||||||||| ||||| || ||||| |||||||||||||| |||||| Sbjct: 241 tcctactgcatggtgtttgggatgtcactgttgccgtcacctgactggagaattatgctt 300 Query: 529 gg 530 || Sbjct: 301 gg 302
>gb|AY165599.1| Saccharum hybrid cultivar putative sugar transporter type 2a mRNA, complete cds Length = 2665 Score = 81.8 bits (41), Expect = 2e-12 Identities = 113/137 (82%) Strand = Plus / Plus Query: 349 ttcggtatcggtttggcagtcacccttgtccctctgtacatttcggagaccgccccgact 408 |||||| |||| ||||| ||||| ||||| |||||||||||||| || || || || | Sbjct: 418 ttcggtgtcggcttggctgtcactcttgttcctctgtacatttcagaaacagctcctcca 477 Query: 409 gacattagagggctgctgaacacgctgccgcagttcagtgggtcaggagggatgttcctt 468 || || ||||| ||||||| || ||||| ||||||||||||||||| |||||||| | Sbjct: 478 gagataagaggtttgctgaatacactgccacagttcagtgggtcaggggggatgtttttg 537 Query: 469 tcttactgcatggtgtt 485 || |||||||||||||| Sbjct: 538 tcgtactgcatggtgtt 554
>gb|AC136843.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0094M06, complete sequence Length = 135583 Score = 60.0 bits (30), Expect = 9e-06 Identities = 126/158 (79%) Strand = Plus / Plus Query: 34 ggcgccgtgctggtcgccatagcggcgtccatcgggaacctgctgcaggggtgggataat 93 ||||||||| |||| ||| | ||||| ||||||| ||| |||||||| ||||| || Sbjct: 99165 ggcgccgtgttggtggccgtggcggccgccatcggcaactacctgcagggatgggacaac 99224 Query: 94 gcgaccattgcaggtgccgtcctgtacataaagaaggagttcagcctggagacccagccc 153 || ||||| || || ||||| |||||||| ||| ||||||| ||| |||||||||||| Sbjct: 99225 gccaccatcgccggcgccgtgctgtacatcaagcgggagttcgccctcgagacccagccc 99284 Query: 154 ttgatcgagggcctcatcgtggccatgtcgctcatcgg 191 | ||||||||| |||| |||||||| |||||||| Sbjct: 99285 gccgtggagggcctcgtcgtcgccatgtccctcatcgg 99322
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 60.0 bits (30), Expect = 9e-06 Identities = 126/158 (79%) Strand = Plus / Plus Query: 34 ggcgccgtgctggtcgccatagcggcgtccatcgggaacctgctgcaggggtgggataat 93 ||||||||| |||| ||| | ||||| ||||||| ||| |||||||| ||||| || Sbjct: 15926567 ggcgccgtgttggtggccgtggcggccgccatcggcaactacctgcagggatgggacaac 15926626 Query: 94 gcgaccattgcaggtgccgtcctgtacataaagaaggagttcagcctggagacccagccc 153 || ||||| || || ||||| |||||||| ||| ||||||| ||| |||||||||||| Sbjct: 15926627 gccaccatcgccggcgccgtgctgtacatcaagcgggagttcgccctcgagacccagccc 15926686 Query: 154 ttgatcgagggcctcatcgtggccatgtcgctcatcgg 191 | ||||||||| |||| |||||||| |||||||| Sbjct: 15926687 gccgtggagggcctcgtcgtcgccatgtccctcatcgg 15926724
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 60.0 bits (30), Expect = 9e-06 Identities = 126/158 (79%) Strand = Plus / Plus Query: 34 ggcgccgtgctggtcgccatagcggcgtccatcgggaacctgctgcaggggtgggataat 93 ||||||||| |||| ||| | ||||| ||||||| ||| |||||||| ||||| || Sbjct: 16013943 ggcgccgtgttggtggccgtggcggccgccatcggcaactacctgcagggatgggacaac 16014002 Query: 94 gcgaccattgcaggtgccgtcctgtacataaagaaggagttcagcctggagacccagccc 153 || ||||| || || ||||| |||||||| ||| ||||||| ||| |||||||||||| Sbjct: 16014003 gccaccatcgccggcgccgtgctgtacatcaagcgggagttcgccctcgagacccagccc 16014062 Query: 154 ttgatcgagggcctcatcgtggccatgtcgctcatcgg 191 | ||||||||| |||| |||||||| |||||||| Sbjct: 16014063 gccgtggagggcctcgtcgtcgccatgtccctcatcgg 16014100 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 cggcggccatgtcgtcgggc 36 |||||||||||||||||||| Sbjct: 20535910 cggcggccatgtcgtcgggc 20535929
>ref|NM_179234.1| Arabidopsis thaliana carbohydrate transporter/ nucleoside transporter/ sugar porter AT4G35300 transcript variant AT4G35300.1 mRNA, complete cds Length = 2590 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Plus Query: 407 ctgacattagagggctgctgaacacgctgccgcagttcagtgggtcaggagggatgttcc 466 |||| ||||| || ||| |||| ||||| |||||||||| ||| || |||||||||||| Sbjct: 574 ctgagattaggggactgttgaatacgctaccgcagttcactggctctggagggatgttct 633 Query: 467 tttcttactgcatggt 482 | |||||||| ||||| Sbjct: 634 tatcttactgtatggt 649
>ref|NM_119696.4| Arabidopsis thaliana carbohydrate transporter/ sugar porter AT4G35300 transcript variant AT4G35300.2 mRNA, complete cds Length = 2591 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Plus Query: 407 ctgacattagagggctgctgaacacgctgccgcagttcagtgggtcaggagggatgttcc 466 |||| ||||| || ||| |||| ||||| |||||||||| ||| || |||||||||||| Sbjct: 605 ctgagattaggggactgttgaatacgctaccgcagttcactggctctggagggatgttct 664 Query: 467 tttcttactgcatggt 482 | |||||||| ||||| Sbjct: 665 tatcttactgtatggt 680
>emb|AL161587.2|ATCHRIV83 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 83 Length = 197859 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Minus Query: 407 ctgacattagagggctgctgaacacgctgccgcagttcagtgggtcaggagggatgttcc 466 |||| ||||| || ||| |||| ||||| |||||||||| ||| || |||||||||||| Sbjct: 63160 ctgagattaggggactgttgaatacgctaccgcagttcactggctctggagggatgttct 63101 Query: 467 tttcttactgcatggt 482 | |||||||| ||||| Sbjct: 63100 tatcttactgtatggt 63085
>emb|AL022604.1|ATF23E12 Arabidopsis thaliana DNA chromosome 4, BAC clone F23E12 (ESSA project) Length = 86710 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Plus Query: 407 ctgacattagagggctgctgaacacgctgccgcagttcagtgggtcaggagggatgttcc 466 |||| ||||| || ||| |||| ||||| |||||||||| ||| || |||||||||||| Sbjct: 40191 ctgagattaggggactgttgaatacgctaccgcagttcactggctctggagggatgttct 40250 Query: 467 tttcttactgcatggt 482 | |||||||| ||||| Sbjct: 40251 tatcttactgtatggt 40266
>gb|AY094465.1| Arabidopsis thaliana AT4g35300/F23E12_140 mRNA, complete cds Length = 2570 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Plus Query: 407 ctgacattagagggctgctgaacacgctgccgcagttcagtgggtcaggagggatgttcc 466 |||| ||||| || ||| |||| ||||| |||||||||| ||| || |||||||||||| Sbjct: 588 ctgagattaggggactgttgaatacgctaccgcagttcactggctctggagggatgttct 647 Query: 467 tttcttactgcatggt 482 | |||||||| ||||| Sbjct: 648 tatcttactgtatggt 663
>emb|AJ532570.1|ATH532570 Arabidopsis thaliana mRNA for monosaccharide sensing protein 2 (mssp2 gene) Length = 2190 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Plus Query: 407 ctgacattagagggctgctgaacacgctgccgcagttcagtgggtcaggagggatgttcc 466 |||| ||||| || ||| |||| ||||| |||||||||| ||| || |||||||||||| Sbjct: 380 ctgagattaggggactgttgaatacgctaccgcagttcactggctctggagggatgttct 439 Query: 467 tttcttactgcatggt 482 | |||||||| ||||| Sbjct: 440 tatcttactgtatggt 455
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 250 ctgctgatcgcctcgtctgtc 270 ||||||||||||||||||||| Sbjct: 2575149 ctgctgatcgcctcgtctgtc 2575169
>emb|BX052001.1|CNS09CAD Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC29DD07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 325 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 470 cttactgcatggtgtttaccatgtc 494 ||||||||||||||||||| ||||| Sbjct: 6 cttactgcatggtgtttacgatgtc 30
>emb|BX031022.1|CNS08W3M Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA46BB11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 900 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 470 cttactgcatggtgtttaccatgtc 494 ||||||||||||||||||| ||||| Sbjct: 302 cttactgcatggtgtttacgatgtc 326
>emb|BX031021.1|CNS08W3L Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA46BB11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1019 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 470 cttactgcatggtgtttaccatgtc 494 ||||||||||||||||||| ||||| Sbjct: 835 cttactgcatggtgtttacgatgtc 811
>emb|BX030896.1|CNS08W04 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA46AE06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 686 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 470 cttactgcatggtgtttaccatgtc 494 ||||||||||||||||||| ||||| Sbjct: 100 cttactgcatggtgtttacgatgtc 124
>emb|BX030895.1|CNS08W03 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA46AE06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1004 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 470 cttactgcatggtgtttaccatgtc 494 ||||||||||||||||||| ||||| Sbjct: 841 cttactgcatggtgtttacgatgtc 817
>emb|BX029431.1|CNS08UVF Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA43DH06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 952 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 470 cttactgcatggtgtttaccatgtc 494 ||||||||||||||||||| ||||| Sbjct: 820 cttactgcatggtgtttacgatgtc 796
>emb|BX027025.1|CNS08T0L Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA40CB07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 912 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 470 cttactgcatggtgtttaccatgtc 494 ||||||||||||||||||| ||||| Sbjct: 284 cttactgcatggtgtttacgatgtc 308
>emb|BX026002.1|CNS08S86 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA4AD06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 684 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 470 cttactgcatggtgtttaccatgtc 494 ||||||||||||||||||| ||||| Sbjct: 286 cttactgcatggtgtttacgatgtc 310
>gb|AE005947.1| Caulobacter crescentus CB15 section 273 of 359 of the complete genome Length = 10826 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 421 ctgctgaacacgctgccgcag 441 ||||||||||||||||||||| Sbjct: 10269 ctgctgaacacgctgccgcag 10249
>ref|XM_575993.1| PREDICTED: Rattus norvegicus similar to XPA binding protein 1 (LOC500619), mRNA Length = 1470 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 407 ctgacattagagggctgctga 427 ||||||||||||||||||||| Sbjct: 650 ctgacattagagggctgctga 670
>gb|BC106038.1| Homo sapiens SRY (sex determining region Y)-box 13, mRNA (cDNA clone MGC:117216 IMAGE:6502746), complete cds Length = 4028 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 tcagcctggagacccagccc 153 |||||||||||||||||||| Sbjct: 752 tcagcctggagacccagccc 771
>ref|NM_005686.2| Homo sapiens SRY (sex determining region Y)-box 13 (SOX13), mRNA Length = 4088 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 tcagcctggagacccagccc 153 |||||||||||||||||||| Sbjct: 733 tcagcctggagacccagccc 752
>ref|XM_514121.1| PREDICTED: Pan troglodytes similar to type 1 diabetes autoantigen ICA12 (LOC457652), mRNA Length = 2502 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 tcagcctggagacccagccc 153 |||||||||||||||||||| Sbjct: 405 tcagcctggagacccagccc 424
>gb|AC133291.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone P0542B04, complete sequence Length = 182823 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 cggcggccatgtcgtcgggc 36 |||||||||||||||||||| Sbjct: 70183 cggcggccatgtcgtcgggc 70202
>gb|AF510763.1| Xenotoca melanosoma specimen-voucher MNCN3661MEX cytochrome b (Cytb) gene, partial cds; mitochondrial gene for mitochondrial product Length = 1141 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 502 ccgcagcctgactggagaat 521 |||||||||||||||||||| Sbjct: 1103 ccgcagcctgactggagaat 1122
>gb|AF510762.1| Xenotoca melanosoma specimen-voucher MNCN3650MEX cytochrome b (Cytb) gene, partial cds; mitochondrial gene for mitochondrial product Length = 1141 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 502 ccgcagcctgactggagaat 521 |||||||||||||||||||| Sbjct: 1103 ccgcagcctgactggagaat 1122
>gb|AF510761.1| Xenotoca melanosoma specimen-voucher MNCN3678MEX cytochrome b (Cytb) gene, partial cds; mitochondrial gene for mitochondrial product Length = 1141 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 502 ccgcagcctgactggagaat 521 |||||||||||||||||||| Sbjct: 1103 ccgcagcctgactggagaat 1122
>gb|AF510760.1| Xenotoca melanosoma specimen-voucher MNCN3660MEX cytochrome b (Cytb) gene, partial cds; mitochondrial gene for mitochondrial product Length = 1141 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 502 ccgcagcctgactggagaat 521 |||||||||||||||||||| Sbjct: 1103 ccgcagcctgactggagaat 1122
>gb|AC132411.3| Mus musculus BAC clone RP23-352O24 from chromosome 1, complete sequence Length = 181902 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 tcagtggcctggtgatgctc 300 |||||||||||||||||||| Sbjct: 97072 tcagtggcctggtgatgctc 97091
>emb|AL592146.8| Human DNA sequence from clone RP11-74C13 on chromosome 1 Contains the SOX13 gene for SOX13 SRY (sex determining region Y)-box 13, two novel genes, a novel gene (FLJ10761), the 3' end of the REN gene for renin and two CpG islands, complete sequence Length = 101862 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 tcagcctggagacccagccc 153 |||||||||||||||||||| Sbjct: 51896 tcagcctggagacccagccc 51915
>emb|AL117372.35|HS1016A21 Human DNA sequence from clone RP5-1016A21 on chromosome 20 Contains ESTs, STSs and GSSs, complete sequence Length = 132859 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 446 gtgggtcaggagggatgttccttt 469 ||||||||||||||| |||||||| Sbjct: 117326 gtgggtcaggagggaggttccttt 117303
>gb|BC040649.1| Homo sapiens SRY (sex determining region Y)-box 13, mRNA (cDNA clone IMAGE:4794944), complete cds Length = 3531 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 tcagcctggagacccagccc 153 |||||||||||||||||||| Sbjct: 741 tcagcctggagacccagccc 760
>emb|AL133452.1|ATF26O13 Arabidopsis thaliana DNA chromosome 3, BAC clone F26O13 Length = 94349 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 77 tgcaggggtgggataatgcgaccattgcaggt 108 ||||||| ||||| ||||| |||||||||||| Sbjct: 53234 tgcagggctgggacaatgccaccattgcaggt 53203
>gb|AC091941.3| Homo sapiens chromosome 5 clone RP11-334G8, complete sequence Length = 197701 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 ctttcttactgcatggtgtt 485 |||||||||||||||||||| Sbjct: 125916 ctttcttactgcatggtgtt 125897
>gb|AC015980.4| Homo sapiens BAC clone RP11-541A15 from 2, complete sequence Length = 97846 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 517 agaatcatgcttggggtttt 536 |||||||||||||||||||| Sbjct: 81239 agaatcatgcttggggtttt 81220
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 419 ggctgctgaacacgctgccg 438 |||||||||||||||||||| Sbjct: 2738092 ggctgctgaacacgctgccg 2738073
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 169 atcgtggccatgtcgctcatcggagcga 196 ||||||| |||||||||||||| ||||| Sbjct: 2604028 atcgtggtcatgtcgctcatcgaagcga 2604055
>gb|AF149301.1|AF149301 Homo sapiens SOX13 gene, complete cds Length = 12522 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 tcagcctggagacccagccc 153 |||||||||||||||||||| Sbjct: 873 tcagcctggagacccagccc 892
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 16 tcggcggccatgtcgtcgggcgcc 39 |||||||||||| ||||||||||| Sbjct: 3395351 tcggcggccatgccgtcgggcgcc 3395328
>emb|AL929449.14| Mouse DNA sequence from clone RP23-279D23 on chromosome 2, complete sequence Length = 146396 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 tcagtggcctggtgatgctc 300 |||||||||||||||||||| Sbjct: 139892 tcagtggcctggtgatgctc 139911
>ref|XM_310191.2| Anopheles gambiae str. PEST ENSANGP00000011053 (ENSANGG00000008564), partial mRNA Length = 1741 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 471 ttactgcatggtgtttaccatgtc 494 |||||||||||||||||| ||||| Sbjct: 1741 ttactgcatggtgtttacgatgtc 1718
>gb|AF116571.1|AF116571 Homo sapiens SRY-like DNA binding protein (SOX13) mRNA, complete cds Length = 3577 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 tcagcctggagacccagccc 153 |||||||||||||||||||| Sbjct: 246 tcagcctggagacccagccc 265
>gb|AF098915.1|AF098915 Homo sapiens type 1 diabetes autoantigen ICA12 mRNA, complete cds Length = 3493 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 tcagcctggagacccagccc 153 |||||||||||||||||||| Sbjct: 138 tcagcctggagacccagccc 157
>gb|AF083105.1|AF083105 Homo sapiens HMG box factor SOX-13 mRNA, complete cds Length = 3583 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 tcagcctggagacccagccc 153 |||||||||||||||||||| Sbjct: 195 tcagcctggagacccagccc 214
>emb|AL627229.10| Mouse DNA sequence from clone RP23-354L19 on chromosome 4, complete sequence Length = 149730 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 cagtggcctggtgatgctct 301 |||||||||||||||||||| Sbjct: 110620 cagtggcctggtgatgctct 110601 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,234,619 Number of Sequences: 3902068 Number of extensions: 4234619 Number of successful extensions: 76991 Number of sequences better than 10.0: 59 Number of HSP's better than 10.0 without gapping: 60 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 76603 Number of HSP's gapped (non-prelim): 382 length of query: 596 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 573 effective length of database: 17,143,297,704 effective search space: 9823109584392 effective search space used: 9823109584392 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)