Clone Information

BLAST Search Result

Clone Name	bags12f11
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	HNRPF_MACFA (Q60HC3) Heterogeneous nuclear ribonucleoprotein F (...	93	6e-19
2	HNRPF_HUMAN (P52597) Heterogeneous nuclear ribonucleoprotein F (...	93	6e-19
3	HNRH1_MOUSE (O35737) Heterogeneous nuclear ribonucleoprotein H (...	88	2e-17
4	HNRH1_HUMAN (P31943) Heterogeneous nuclear ribonucleoprotein H (...	88	2e-17
5	HNRH2_HUMAN (P55795) Heterogeneous nuclear ribonucleoprotein H' ...	87	3e-17
6	HNRH2_MOUSE (P70333) Heterogeneous nuclear ribonucleoprotein H' ...	87	4e-17
7	RBM12_MACMU (Q8SQ27) RNA-binding protein 12 (RNA-binding motif p...	84	4e-16
8	RBM12_HUMAN (Q9NTZ6) RNA-binding protein 12 (RNA-binding motif p...	83	6e-16
9	RBM12_MOUSE (Q8R4X3) RNA-binding protein 12 (RNA-binding motif p...	82	2e-15
10	GRSF1_HUMAN (Q12849) G-rich sequence factor 1 (GRSF-1)	79	8e-15
11	GRSF1_MOUSE (Q8C5Q4) G-rich sequence factor 1 (GRSF-1)	79	1e-14
12	HNRH3_HUMAN (P31942) Heterogeneous nuclear ribonucleoprotein H3 ...	69	1e-11
13	RBM19_HUMAN (Q9Y4C8) Probable RNA-binding protein 19 (RNA-bindin...	47	6e-05
14	RBM19_MOUSE (Q8R3C6) Probable RNA-binding protein 19 (RNA-bindin...	46	1e-04
15	NUCL_CHICK (P15771) Nucleolin (Protein C23)	40	0.004
16	PROP_MOUSE (P11680) Properdin precursor (Factor P)	37	0.048
17	NUCL_MESAU (P08199) Nucleolin (Protein C23)	36	0.11
18	NUCL_XENLA (P20397) Nucleolin (Protein C23)	35	0.14
19	MRD1_CANAL (Q5AJS6) Multiple RNA-binding domain-containing prote...	35	0.14
20	NUCL_RAT (P13383) Nucleolin (Protein C23)	35	0.18
21	NUCL_PONPY (Q5RF26) Nucleolin	34	0.41
22	NUCL_MACFA (Q4R4J7) Nucleolin	34	0.41
23	RNPC1_HUMAN (Q9H0Z9) RNA-binding region-containing protein 1 (HS...	34	0.41
24	NUCL_HUMAN (P19338) Nucleolin (Protein C23)	34	0.41
25	EST_ACILW (P18773) Esterase (EC 3.1.1.-)	33	0.53
26	BLVR_BOVIN (Q03368) Bovine leukemia virus cell receptor precurso...	33	0.53
27	RNPC1_MOUSE (Q62176) RNA-binding region-containing protein 1 (ss...	33	0.70
28	ROC5_NICSY (P19684) 33 kDa ribonucleoprotein, chloroplast precursor	33	0.70
29	ZN575_MOUSE (Q3TXZ1) Zinc finger protein 575	33	0.91
30	PK3C3_XENLA (Q6AZN6) Phosphatidylinositol 3-kinase catalytic sub...	32	1.6
31	Y371_MYCPN (P75410) Hypothetical protein MPN371 (A19_orf211)	32	1.6
32	K1H8_HUMAN (O76015) Keratin, type I cuticular Ha8 (Hair keratin,...	32	1.6
33	EPDR1_MACFA (Q9N0C7) Mammalian ependymin-related protein 1 precu...	32	1.6
34	PK3C3_RAT (O88763) Phosphatidylinositol 3-kinase catalytic subun...	32	1.6
35	PK3C3_PIG (Q5D891) Phosphatidylinositol 3-kinase catalytic subun...	32	1.6
36	PK3C3_MOUSE (Q6PF93) Phosphatidylinositol 3-kinase catalytic sub...	32	1.6
37	PK3C3_HUMAN (Q8NEB9) Phosphatidylinositol 3-kinase catalytic sub...	32	1.6
38	RNP1_YEAST (P32385) Ribonucleoprotein 1	32	2.0
39	DNAJ_METCA (Q607A6) Chaperone protein dnaJ	32	2.0
40	WC11_BOVIN (P30205) Antigen WC1.1 precursor	31	2.6
41	TRI47_MOUSE (Q8C0E3) Tripartite motif protein 47	31	2.6
42	YRA1_YEAST (Q12159) RNA annealing protein YRA1	31	3.5
43	RIPK5_FUGRU (Q4VSN2) Receptor-interacting serine/threonine-prote...	31	3.5
44	EPDR1_HUMAN (Q9UM22) Mammalian ependymin-related protein 1 precu...	31	3.5
45	DPS1_MOUSE (Q33DR2) Decaprenyl-diphosphate synthase subunit 1 (E...	30	4.5
46	ENG1_YEAST (P53753) Endo-1,3(4)-beta-glucanase 1 precursor (EC 3...	30	5.9
47	TNR4_RAT (P15725) Tumor necrosis factor receptor superfamily mem...	30	7.7
48	YI31_AGRT7 (P05680) Insertion element IS136 hypothetical 16.9 kD...	30	7.7
49	NOP4_YEAST (P37838) Nucleolar protein NOP4 (Nucleolar protein NO...	30	7.7
50	MILK2_HUMAN (Q8IY33) MICAL-like protein 2	30	7.7

>HNRPF_MACFA (Q60HC3) Heterogeneous nuclear ribonucleoprotein F (hnRNP F)|
          Length = 414

 Score = 93.2 bits (230), Expect = 6e-19
 Identities = 55/167 (32%), Positives = 85/167 (50%)
 Frame = +3

Query: 42  TXNGRFSGEAFVVFPSSMQAEFALHRNRQNMGRRYVEVFRCKKQEYYSAIAAEVNQGGAL 221
           T  GR SGEAFV   S    + AL ++R++MG RY+EVF+  + E    +          
Sbjct: 47  TREGRQSGEAFVELGSEDDVKMALKKDRESMGHRYIEVFKSHRTEMDWVLK--------- 97

Query: 222 LEXXXXXXXXXXXXXXXXXDKSSMEYTEVLKLRGLPYSATIEDIIKFFVEYELTEDNVHI 401
                              + +       ++LRGLP+  T E+I++FF   E+  + + +
Sbjct: 98  ---------------HSGPNSADSANDGFVRLRGLPFGCTKEEIVQFFSGLEIVPNGITL 142

Query: 402 AYRSDGKATGEAFVEFPTAEVAKTAMCKDKMTIGTRYVELFPSTPEE 542
               +GK TGEAFV+F + E+A+ A+ K K  IG RY+E+F S+ EE
Sbjct: 143 PVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQEE 189



 Score = 64.7 bits (156), Expect = 2e-10
 Identities = 38/78 (48%), Positives = 45/78 (57%)
 Frame = +3

Query: 315 LRGLPYSATIEDIIKFFVEYELTEDNVHIAYRSDGKATGEAFVEFPTAEVAKTAMCKDKM 494
           +RGLPY AT  DI  FF    L    VHI    DG+ TGEA VEF T E A  AM KD+ 
Sbjct: 292 MRGLPYKATENDIYNFFSP--LNPVRVHIEIGPDGRVTGEADVEFATHEEAVAAMSKDRA 349

Query: 495 TIGTRYVELFPSTPEEAS 548
            +  RY+ELF ++   AS
Sbjct: 350 NMQHRYIELFLNSTTGAS 367



 Score = 64.3 bits (155), Expect = 3e-10
 Identities = 31/77 (40%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
 Frame = +3

Query: 306 VLKLRGLPYSATIEDIIKFFVEYELTED--NVHIAYRSDGKATGEAFVEFPTAEVAKTAM 479
           V+KLRGLP+S ++ED+  F  +  + +    VH  Y  +G+ +GEAFVE  + +  K A+
Sbjct: 11  VVKLRGLPWSCSVEDVQNFLSDCTIHDGAAGVHFIYTREGRQSGEAFVELGSEDDVKMAL 70

Query: 480 CKDKMTIGTRYVELFPS 530
            KD+ ++G RY+E+F S
Sbjct: 71  KKDRESMGHRYIEVFKS 87



 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 20/45 (44%), Positives = 31/45 (68%)
 Frame = +3

Query: 51  GRFSGEAFVVFPSSMQAEFALHRNRQNMGRRYVEVFRCKKQEYYS 185
           G+ +GEAFV F S   AE AL ++++ +G RY+EVF+  ++E  S
Sbjct: 148 GKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQEEVRS 192



 Score = 35.0 bits (79), Expect = 0.18
 Identities = 16/37 (43%), Positives = 25/37 (67%)
 Frame = +3

Query: 48  NGRFSGEAFVVFPSSMQAEFALHRNRQNMGRRYVEVF 158
           +GR +GEA V F +  +A  A+ ++R NM  RY+E+F
Sbjct: 323 DGRVTGEADVEFATHEEAVAAMSKDRANMQHRYIELF 359

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>HNRPF_HUMAN (P52597) Heterogeneous nuclear ribonucleoprotein F (hnRNP F)|
           (Nucleolin-like protein mcs94-1)
          Length = 414

 Score = 93.2 bits (230), Expect = 6e-19
 Identities = 55/167 (32%), Positives = 85/167 (50%)
 Frame = +3

Query: 42  TXNGRFSGEAFVVFPSSMQAEFALHRNRQNMGRRYVEVFRCKKQEYYSAIAAEVNQGGAL 221
           T  GR SGEAFV   S    + AL ++R++MG RY+EVF+  + E    +          
Sbjct: 47  TREGRQSGEAFVELGSEDDVKMALKKDRESMGHRYIEVFKSHRTEMDWVLK--------- 97

Query: 222 LEXXXXXXXXXXXXXXXXXDKSSMEYTEVLKLRGLPYSATIEDIIKFFVEYELTEDNVHI 401
                              + +       ++LRGLP+  T E+I++FF   E+  + + +
Sbjct: 98  ---------------HSGPNSADSANDGFVRLRGLPFGCTKEEIVQFFSGLEIVPNGITL 142

Query: 402 AYRSDGKATGEAFVEFPTAEVAKTAMCKDKMTIGTRYVELFPSTPEE 542
               +GK TGEAFV+F + E+A+ A+ K K  IG RY+E+F S+ EE
Sbjct: 143 PVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQEE 189



 Score = 64.7 bits (156), Expect = 2e-10
 Identities = 38/78 (48%), Positives = 45/78 (57%)
 Frame = +3

Query: 315 LRGLPYSATIEDIIKFFVEYELTEDNVHIAYRSDGKATGEAFVEFPTAEVAKTAMCKDKM 494
           +RGLPY AT  DI  FF    L    VHI    DG+ TGEA VEF T E A  AM KD+ 
Sbjct: 292 MRGLPYKATENDIYNFFSP--LNPVRVHIEIGPDGRVTGEADVEFATHEEAVAAMSKDRA 349

Query: 495 TIGTRYVELFPSTPEEAS 548
            +  RY+ELF ++   AS
Sbjct: 350 NMQHRYIELFLNSTTGAS 367



 Score = 64.3 bits (155), Expect = 3e-10
 Identities = 31/77 (40%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
 Frame = +3

Query: 306 VLKLRGLPYSATIEDIIKFFVEYELTED--NVHIAYRSDGKATGEAFVEFPTAEVAKTAM 479
           V+KLRGLP+S ++ED+  F  +  + +    VH  Y  +G+ +GEAFVE  + +  K A+
Sbjct: 11  VVKLRGLPWSCSVEDVQNFLSDCTIHDGAAGVHFIYTREGRQSGEAFVELGSEDDVKMAL 70

Query: 480 CKDKMTIGTRYVELFPS 530
            KD+ ++G RY+E+F S
Sbjct: 71  KKDRESMGHRYIEVFKS 87



 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 20/45 (44%), Positives = 31/45 (68%)
 Frame = +3

Query: 51  GRFSGEAFVVFPSSMQAEFALHRNRQNMGRRYVEVFRCKKQEYYS 185
           G+ +GEAFV F S   AE AL ++++ +G RY+EVF+  ++E  S
Sbjct: 148 GKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQEEVRS 192



 Score = 35.0 bits (79), Expect = 0.18
 Identities = 16/37 (43%), Positives = 25/37 (67%)
 Frame = +3

Query: 48  NGRFSGEAFVVFPSSMQAEFALHRNRQNMGRRYVEVF 158
           +GR +GEA V F +  +A  A+ ++R NM  RY+E+F
Sbjct: 323 DGRVTGEADVEFATHEEAVAAMSKDRANMQHRYIELF 359

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>HNRH1_MOUSE (O35737) Heterogeneous nuclear ribonucleoprotein H (hnRNP H)|
          Length = 448

 Score = 87.8 bits (216), Expect = 2e-17
 Identities = 53/167 (31%), Positives = 82/167 (49%)
 Frame = +3

Query: 42  TXNGRFSGEAFVVFPSSMQAEFALHRNRQNMGRRYVEVFRCKKQEYYSAIAAEVNQGGAL 221
           T  GR SGEAFV   S  + + AL ++R+ MG RYVEVF+    E    +          
Sbjct: 47  TREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLK--------- 97

Query: 222 LEXXXXXXXXXXXXXXXXXDKSSMEYTEVLKLRGLPYSATIEDIIKFFVEYELTEDNVHI 401
                              +         ++LRGLP+  + E+I++FF   E+  + + +
Sbjct: 98  ---------------HTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGITL 142

Query: 402 AYRSDGKATGEAFVEFPTAEVAKTAMCKDKMTIGTRYVELFPSTPEE 542
                G++TGEAFV+F + E+A+ A+ K K  IG RY+E+F S+  E
Sbjct: 143 PVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAE 189



 Score = 65.5 bits (158), Expect = 1e-10
 Identities = 40/78 (51%), Positives = 45/78 (57%)
 Frame = +3

Query: 315 LRGLPYSATIEDIIKFFVEYELTEDNVHIAYRSDGKATGEAFVEFPTAEVAKTAMCKDKM 494
           +RGLPY AT  DI  FF    L    VHI    DG+ TGEA VEF T E A  AM KDK 
Sbjct: 292 MRGLPYRATENDIYNFFSP--LNPVRVHIEIGPDGRVTGEADVEFATHEDAVAAMSKDKA 349

Query: 495 TIGTRYVELFPSTPEEAS 548
            +  RYVELF ++   AS
Sbjct: 350 NMQHRYVELFLNSTAGAS 367



 Score = 62.4 bits (150), Expect = 1e-09
 Identities = 30/81 (37%), Positives = 51/81 (62%), Gaps = 2/81 (2%)
 Frame = +3

Query: 306 VLKLRGLPYSATIEDIIKFFVEYELTE--DNVHIAYRSDGKATGEAFVEFPTAEVAKTAM 479
           V+K+RGLP+S + +++ +FF + ++      +   Y  +G+ +GEAFVE  + +  K A+
Sbjct: 11  VVKVRGLPWSCSADEVQRFFSDCKIQNGAQGIRFIYTREGRPSGEAFVELESEDEVKLAL 70

Query: 480 CKDKMTIGTRYVELFPSTPEE 542
            KD+ T+G RYVE+F S   E
Sbjct: 71  KKDRETMGHRYVEVFKSNNVE 91



 Score = 33.5 bits (75), Expect = 0.53
 Identities = 16/37 (43%), Positives = 24/37 (64%)
 Frame = +3

Query: 48  NGRFSGEAFVVFPSSMQAEFALHRNRQNMGRRYVEVF 158
           +GR +GEA V F +   A  A+ +++ NM  RYVE+F
Sbjct: 323 DGRVTGEADVEFATHEDAVAAMSKDKANMQHRYVELF 359

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>HNRH1_HUMAN (P31943) Heterogeneous nuclear ribonucleoprotein H (hnRNP H)|
          Length = 448

 Score = 87.8 bits (216), Expect = 2e-17
 Identities = 53/167 (31%), Positives = 82/167 (49%)
 Frame = +3

Query: 42  TXNGRFSGEAFVVFPSSMQAEFALHRNRQNMGRRYVEVFRCKKQEYYSAIAAEVNQGGAL 221
           T  GR SGEAFV   S  + + AL ++R+ MG RYVEVF+    E    +          
Sbjct: 47  TREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLK--------- 97

Query: 222 LEXXXXXXXXXXXXXXXXXDKSSMEYTEVLKLRGLPYSATIEDIIKFFVEYELTEDNVHI 401
                              +         ++LRGLP+  + E+I++FF   E+  + + +
Sbjct: 98  ---------------HTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGITL 142

Query: 402 AYRSDGKATGEAFVEFPTAEVAKTAMCKDKMTIGTRYVELFPSTPEE 542
                G++TGEAFV+F + E+A+ A+ K K  IG RY+E+F S+  E
Sbjct: 143 PVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAE 189



 Score = 65.5 bits (158), Expect = 1e-10
 Identities = 40/78 (51%), Positives = 45/78 (57%)
 Frame = +3

Query: 315 LRGLPYSATIEDIIKFFVEYELTEDNVHIAYRSDGKATGEAFVEFPTAEVAKTAMCKDKM 494
           +RGLPY AT  DI  FF    L    VHI    DG+ TGEA VEF T E A  AM KDK 
Sbjct: 292 MRGLPYRATENDIYNFFSP--LNPVRVHIEIGPDGRVTGEADVEFATHEDAVAAMSKDKA 349

Query: 495 TIGTRYVELFPSTPEEAS 548
            +  RYVELF ++   AS
Sbjct: 350 NMQHRYVELFLNSTAGAS 367



 Score = 62.4 bits (150), Expect = 1e-09
 Identities = 30/81 (37%), Positives = 51/81 (62%), Gaps = 2/81 (2%)
 Frame = +3

Query: 306 VLKLRGLPYSATIEDIIKFFVEYELTE--DNVHIAYRSDGKATGEAFVEFPTAEVAKTAM 479
           V+K+RGLP+S + +++ +FF + ++      +   Y  +G+ +GEAFVE  + +  K A+
Sbjct: 11  VVKVRGLPWSCSADEVQRFFSDCKIQNGAQGIRFIYTREGRPSGEAFVELESEDEVKLAL 70

Query: 480 CKDKMTIGTRYVELFPSTPEE 542
            KD+ T+G RYVE+F S   E
Sbjct: 71  KKDRETMGHRYVEVFKSNNVE 91



 Score = 33.5 bits (75), Expect = 0.53
 Identities = 16/37 (43%), Positives = 24/37 (64%)
 Frame = +3

Query: 48  NGRFSGEAFVVFPSSMQAEFALHRNRQNMGRRYVEVF 158
           +GR +GEA V F +   A  A+ +++ NM  RYVE+F
Sbjct: 323 DGRVTGEADVEFATHEDAVAAMSKDKANMQHRYVELF 359

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>HNRH2_HUMAN (P55795) Heterogeneous nuclear ribonucleoprotein H' (hnRNP H')|
           (FTP-3)
          Length = 449

 Score = 87.4 bits (215), Expect = 3e-17
 Identities = 53/167 (31%), Positives = 82/167 (49%)
 Frame = +3

Query: 42  TXNGRFSGEAFVVFPSSMQAEFALHRNRQNMGRRYVEVFRCKKQEYYSAIAAEVNQGGAL 221
           T  GR SGEAFV   S  + + AL ++R+ MG RYVEVF+    E    +          
Sbjct: 48  TREGRPSGEAFVELESEEEVKLALKKDRETMGHRYVEVFKSNSVEMDWVLK--------- 98

Query: 222 LEXXXXXXXXXXXXXXXXXDKSSMEYTEVLKLRGLPYSATIEDIIKFFVEYELTEDNVHI 401
                              +         ++LRGLP+  + E+I++FF   E+  + + +
Sbjct: 99  ---------------HTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGMTL 143

Query: 402 AYRSDGKATGEAFVEFPTAEVAKTAMCKDKMTIGTRYVELFPSTPEE 542
                G++TGEAFV+F + E+A+ A+ K K  IG RY+E+F S+  E
Sbjct: 144 PVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAE 190



 Score = 65.5 bits (158), Expect = 1e-10
 Identities = 31/81 (38%), Positives = 52/81 (64%), Gaps = 2/81 (2%)
 Frame = +3

Query: 306 VLKLRGLPYSATIEDIIKFFVEYELTE--DNVHIAYRSDGKATGEAFVEFPTAEVAKTAM 479
           V+K+RGLP+S + +++++FF + ++      +   Y  +G+ +GEAFVE  + E  K A+
Sbjct: 12  VVKVRGLPWSCSADEVMRFFSDCKIQNGTSGIRFIYTREGRPSGEAFVELESEEEVKLAL 71

Query: 480 CKDKMTIGTRYVELFPSTPEE 542
            KD+ T+G RYVE+F S   E
Sbjct: 72  KKDRETMGHRYVEVFKSNSVE 92



 Score = 64.7 bits (156), Expect = 2e-10
 Identities = 38/70 (54%), Positives = 41/70 (58%)
 Frame = +3

Query: 315 LRGLPYSATIEDIIKFFVEYELTEDNVHIAYRSDGKATGEAFVEFPTAEVAKTAMCKDKM 494
           +RGLPY AT  DI  FF    L    VHI    DG+ TGEA VEF T E A  AM KDK 
Sbjct: 293 MRGLPYRATENDIYNFFSP--LNPMRVHIEIGPDGRVTGEADVEFATHEDAVAAMAKDKA 350

Query: 495 TIGTRYVELF 524
            +  RYVELF
Sbjct: 351 NMQHRYVELF 360



 Score = 33.1 bits (74), Expect = 0.70
 Identities = 16/37 (43%), Positives = 24/37 (64%)
 Frame = +3

Query: 48  NGRFSGEAFVVFPSSMQAEFALHRNRQNMGRRYVEVF 158
           +GR +GEA V F +   A  A+ +++ NM  RYVE+F
Sbjct: 324 DGRVTGEADVEFATHEDAVAAMAKDKANMQHRYVELF 360

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>HNRH2_MOUSE (P70333) Heterogeneous nuclear ribonucleoprotein H' (hnRNP H')|
          Length = 449

 Score = 87.0 bits (214), Expect = 4e-17
 Identities = 53/167 (31%), Positives = 82/167 (49%)
 Frame = +3

Query: 42  TXNGRFSGEAFVVFPSSMQAEFALHRNRQNMGRRYVEVFRCKKQEYYSAIAAEVNQGGAL 221
           T  GR SGEAFV   S  + + AL ++R+ MG RYVEVF+    E    +          
Sbjct: 48  TREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNSVEMDWVLK--------- 98

Query: 222 LEXXXXXXXXXXXXXXXXXDKSSMEYTEVLKLRGLPYSATIEDIIKFFVEYELTEDNVHI 401
                              +         ++LRGLP+  + E+I++FF   E+  + + +
Sbjct: 99  ---------------HTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGMTL 143

Query: 402 AYRSDGKATGEAFVEFPTAEVAKTAMCKDKMTIGTRYVELFPSTPEE 542
                G++TGEAFV+F + E+A+ A+ K K  IG RY+E+F S+  E
Sbjct: 144 PVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAE 190



 Score = 65.9 bits (159), Expect = 1e-10
 Identities = 32/81 (39%), Positives = 52/81 (64%), Gaps = 2/81 (2%)
 Frame = +3

Query: 306 VLKLRGLPYSATIEDIIKFFVEYELTE--DNVHIAYRSDGKATGEAFVEFPTAEVAKTAM 479
           V+K+RGLP+S + E++++FF + ++      V   Y  +G+ +GEAFVE  + +  K A+
Sbjct: 12  VVKVRGLPWSCSAEEVMRFFSDCKIQNGTSGVRFIYTREGRPSGEAFVELESEDEVKLAL 71

Query: 480 CKDKMTIGTRYVELFPSTPEE 542
            KD+ T+G RYVE+F S   E
Sbjct: 72  KKDRETMGHRYVEVFKSNSVE 92



 Score = 64.7 bits (156), Expect = 2e-10
 Identities = 38/70 (54%), Positives = 41/70 (58%)
 Frame = +3

Query: 315 LRGLPYSATIEDIIKFFVEYELTEDNVHIAYRSDGKATGEAFVEFPTAEVAKTAMCKDKM 494
           +RGLPY AT  DI  FF    L    VHI    DG+ TGEA VEF T E A  AM KDK 
Sbjct: 293 MRGLPYRATENDIYNFFSP--LNPMRVHIEIGPDGRVTGEADVEFATHEDAVAAMAKDKA 350

Query: 495 TIGTRYVELF 524
            +  RYVELF
Sbjct: 351 NMQHRYVELF 360



 Score = 33.1 bits (74), Expect = 0.70
 Identities = 16/37 (43%), Positives = 24/37 (64%)
 Frame = +3

Query: 48  NGRFSGEAFVVFPSSMQAEFALHRNRQNMGRRYVEVF 158
           +GR +GEA V F +   A  A+ +++ NM  RYVE+F
Sbjct: 324 DGRVTGEADVEFATHEDAVAAMAKDKANMQHRYVELF 360

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>RBM12_MACMU (Q8SQ27) RNA-binding protein 12 (RNA-binding motif protein 12)|
           (SH3/WW domain anchor protein in the nucleus) (SWAN)
          Length = 932

 Score = 83.6 bits (205), Expect = 4e-16
 Identities = 54/167 (32%), Positives = 83/167 (49%), Gaps = 6/167 (3%)
 Frame = +3

Query: 51  GRFSGEAFVVFPSSMQAEFALHRNRQNMGRRYVEVFRCKKQEYYSA---IAAEVNQGGAL 221
           GR +G   V F S      AL RNR  M +RYVEV    ++++ +A   I  + N G + 
Sbjct: 340 GRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEVSPATERQWVAAGGHITFKQNMGPSG 399

Query: 222 LEX---XXXXXXXXXXXXXXXXDKSSMEYTEVLKLRGLPYSATIEDIIKFFVEYELTEDN 392
                                  +S  E    + L+GLP+ A  + +I FF + ++ ED+
Sbjct: 400 QSHPPPQTLPRSKSPSGQKRSRSRSPHEAGFCVYLKGLPFEAENKHVIDFFKKLDIVEDS 459

Query: 393 VHIAYRSDGKATGEAFVEFPTAEVAKTAMCKDKMTIGTRYVELFPST 533
           ++IAY  +GKATGE FVEF      K A+C+ K  +G R++++ P T
Sbjct: 460 IYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVHPIT 506



 Score = 47.8 bits (112), Expect = 3e-05
 Identities = 24/73 (32%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
 Frame = +3

Query: 306  VLKLRGLPYSATIEDIIKFFVEYELTEDNVHIAYRSDGKATGEAFVEFPTAEVAKTAMCK 485
            V+K++ +P++ +I++I+ FF  Y++   +V + Y   G  TGEA V F + + A  A+  
Sbjct: 857  VIKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVID 916

Query: 486  -DKMTIGTRYVEL 521
             +   IG+R V+L
Sbjct: 917  LNDRPIGSRKVKL 929



 Score = 47.0 bits (110), Expect = 5e-05
 Identities = 31/141 (21%), Positives = 65/141 (46%)
 Frame = +3

Query: 48  NGRFSGEAFVVFPSSMQAEFALHRNRQNMGRRYVEVFRCKKQEYYSAIAAEVNQGGALLE 227
           NG+ +GE FV F +    + AL R++Q MG R+++V    K+     +  +++     L+
Sbjct: 467 NGKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVHPITKK----GMLEKIDMIRKRLQ 522

Query: 228 XXXXXXXXXXXXXXXXXDKSSMEYTEVLKLRGLPYSATIEDIIKFFVEYELTEDNVHIAY 407
                            + + +       +  +P+S T  D+++F     + E+ VH+  
Sbjct: 523 NFSYDQREMMLNPEGDVNSAKV----CAHITNIPFSITKMDVLQFLEGIPVDENAVHVLV 578

Query: 408 RSDGKATGEAFVEFPTAEVAK 470
            ++G+  G+A V+F   + A+
Sbjct: 579 DNNGQGLGQALVQFKNEDDAR 599



 Score = 41.2 bits (95), Expect = 0.003
 Identities = 23/78 (29%), Positives = 42/78 (53%)
 Frame = +3

Query: 309 LKLRGLPYSATIEDIIKFFVEYELTEDNVHIAYRSDGKATGEAFVEFPTAEVAKTAMCKD 488
           + + G+P+SA   D+  FF  + L  D VH+     G+  G   V+F + +    A+ ++
Sbjct: 306 VSVHGMPFSAMENDVRDFF--HGLRVDAVHLLKDHVGRNNGNGLVKFLSPQDTFEALKRN 363

Query: 489 KMTIGTRYVELFPSTPEE 542
           +M +  RYVE+ P+T  +
Sbjct: 364 RMLMIQRYVEVSPATERQ 381



 Score = 40.8 bits (94), Expect = 0.003
 Identities = 29/79 (36%), Positives = 38/79 (48%)
 Frame = +3

Query: 306 VLKLRGLPYSATIEDIIKFFVEYELTEDNVHIAYRSDGKATGEAFVEFPTAEVAKTAMCK 485
           V++L+GLP  A   DI  FF    + +  VHI     G   GEAF+ F T E A+  M +
Sbjct: 4   VIRLQGLPIVAGTMDIRHFFSGLTIPDGGVHIV----GGELGEAFIVFATDEDARLGMMR 59

Query: 486 DKMTIGTRYVELFPSTPEE 542
              TI    V L  S+  E
Sbjct: 60  TGGTIKGSKVTLLLSSKTE 78

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>RBM12_HUMAN (Q9NTZ6) RNA-binding protein 12 (RNA-binding motif protein 12)|
           (SH3/WW domain anchor protein in the nucleus) (SWAN)
          Length = 932

 Score = 83.2 bits (204), Expect = 6e-16
 Identities = 54/167 (32%), Positives = 83/167 (49%), Gaps = 6/167 (3%)
 Frame = +3

Query: 51  GRFSGEAFVVFPSSMQAEFALHRNRQNMGRRYVEVFRCKKQEYYSA---IAAEVNQGGAL 221
           GR +G   V F S      AL RNR  M +RYVEV    ++++ +A   I  + N G + 
Sbjct: 340 GRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEVSPATERQWVAAGGHITFKQNMGPSG 399

Query: 222 LEX---XXXXXXXXXXXXXXXXDKSSMEYTEVLKLRGLPYSATIEDIIKFFVEYELTEDN 392
                                  +S  E    + L+GLP+ A  + +I FF + ++ ED+
Sbjct: 400 QTHPPPQTLPRSKSPSGQKRSRSRSPHEAGFCVYLKGLPFEAENKHVIDFFKKLDIVEDS 459

Query: 393 VHIAYRSDGKATGEAFVEFPTAEVAKTAMCKDKMTIGTRYVELFPST 533
           ++IAY  +GKATGE FVEF      K A+C+ K  +G R++++ P T
Sbjct: 460 IYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVHPIT 506



 Score = 47.8 bits (112), Expect = 3e-05
 Identities = 24/73 (32%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
 Frame = +3

Query: 306  VLKLRGLPYSATIEDIIKFFVEYELTEDNVHIAYRSDGKATGEAFVEFPTAEVAKTAMCK 485
            V+K++ +P++ +I++I+ FF  Y++   +V + Y   G  TGEA V F + + A  A+  
Sbjct: 857  VIKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVID 916

Query: 486  -DKMTIGTRYVEL 521
             +   IG+R V+L
Sbjct: 917  LNDRPIGSRKVKL 929



 Score = 47.0 bits (110), Expect = 5e-05
 Identities = 31/141 (21%), Positives = 65/141 (46%)
 Frame = +3

Query: 48  NGRFSGEAFVVFPSSMQAEFALHRNRQNMGRRYVEVFRCKKQEYYSAIAAEVNQGGALLE 227
           NG+ +GE FV F +    + AL R++Q MG R+++V    K+     +  +++     L+
Sbjct: 467 NGKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVHPITKK----GMLEKIDMIRKRLQ 522

Query: 228 XXXXXXXXXXXXXXXXXDKSSMEYTEVLKLRGLPYSATIEDIIKFFVEYELTEDNVHIAY 407
                            + + +       +  +P+S T  D+++F     + E+ VH+  
Sbjct: 523 NFSYDQREMILNPEGDVNSAKV----CAHITNIPFSITKMDVLQFLEGIPVDENAVHVLV 578

Query: 408 RSDGKATGEAFVEFPTAEVAK 470
            ++G+  G+A V+F   + A+
Sbjct: 579 DNNGQGLGQALVQFKNEDDAR 599



 Score = 41.2 bits (95), Expect = 0.003
 Identities = 23/78 (29%), Positives = 42/78 (53%)
 Frame = +3

Query: 309 LKLRGLPYSATIEDIIKFFVEYELTEDNVHIAYRSDGKATGEAFVEFPTAEVAKTAMCKD 488
           + + G+P+SA   D+  FF  + L  D VH+     G+  G   V+F + +    A+ ++
Sbjct: 306 VSVHGMPFSAMENDVRDFF--HGLRVDAVHLLKDHVGRNNGNGLVKFLSPQDTFEALKRN 363

Query: 489 KMTIGTRYVELFPSTPEE 542
           +M +  RYVE+ P+T  +
Sbjct: 364 RMLMIQRYVEVSPATERQ 381



 Score = 40.8 bits (94), Expect = 0.003
 Identities = 29/79 (36%), Positives = 38/79 (48%)
 Frame = +3

Query: 306 VLKLRGLPYSATIEDIIKFFVEYELTEDNVHIAYRSDGKATGEAFVEFPTAEVAKTAMCK 485
           V++L+GLP  A   DI  FF    + +  VHI     G   GEAF+ F T E A+  M +
Sbjct: 4   VIRLQGLPIVAGTMDIRHFFSGLTIPDGGVHIV----GGELGEAFIVFATDEDARLGMMR 59

Query: 486 DKMTIGTRYVELFPSTPEE 542
              TI    V L  S+  E
Sbjct: 60  TGGTIKGSKVTLLLSSKTE 78

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>RBM12_MOUSE (Q8R4X3) RNA-binding protein 12 (RNA-binding motif protein 12)|
           (SH3/WW domain anchor protein in the nucleus) (SWAN)
          Length = 1002

 Score = 81.6 bits (200), Expect = 2e-15
 Identities = 54/167 (32%), Positives = 83/167 (49%), Gaps = 6/167 (3%)
 Frame = +3

Query: 51  GRFSGEAFVVFPSSMQAEFALHRNRQNMGRRYVEVFRCKKQEYYSA---IAAEVNQGG-- 215
           GR +G   V F S      AL RNR  M +RYVEV    ++++ +A   I  + + G   
Sbjct: 340 GRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEVSPATERQWVAAGGHITFKQSMGPSG 399

Query: 216 -ALLEXXXXXXXXXXXXXXXXXDKSSMEYTEVLKLRGLPYSATIEDIIKFFVEYELTEDN 392
            A                     +S  E    + L+GLP+ A  + +I FF + ++ ED+
Sbjct: 400 QAHPPPQTLPRSKSPSGQKRSRSRSPHEAGFCVYLKGLPFEAENKHVIDFFKKLDIVEDS 459

Query: 393 VHIAYRSDGKATGEAFVEFPTAEVAKTAMCKDKMTIGTRYVELFPST 533
           ++IAY  +GKATGE FVEF      K A+C+ K  +G R++++ P T
Sbjct: 460 IYIAYGPNGKATGEGFVEFRNDADYKAALCRHKQYMGNRFIQVHPIT 506



 Score = 48.1 bits (113), Expect = 2e-05
 Identities = 32/140 (22%), Positives = 60/140 (42%)
 Frame = +3

Query: 48  NGRFSGEAFVVFPSSMQAEFALHRNRQNMGRRYVEVFRCKKQEYYSAIAAEVNQGGALLE 227
           NG+ +GE FV F +    + AL R++Q MG R+++V    K+     I         ++ 
Sbjct: 467 NGKATGEGFVEFRNDADYKAALCRHKQYMGNRFIQVHPITKKGMLEKID--------MIR 518

Query: 228 XXXXXXXXXXXXXXXXXDKSSMEYTEVLKLRGLPYSATIEDIIKFFVEYELTEDNVHIAY 407
                            +           +  +P+S T  D+++F     + E+ VH+  
Sbjct: 519 KRLQNFSYDQRELVLNPEGEVSSAKVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLV 578

Query: 408 RSDGKATGEAFVEFPTAEVA 467
            ++G+  G+A V+F T + A
Sbjct: 579 DNNGQGLGQALVQFKTEDDA 598



 Score = 47.4 bits (111), Expect = 4e-05
 Identities = 23/73 (31%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
 Frame = +3

Query: 306  VLKLRGLPYSATIEDIIKFFVEYELTEDNVHIAYRSDGKATGEAFVEFPTAEVAKTAMCK 485
            ++K++ +P++ +I++I+ FF  Y++   +V + Y   G  TGEA V F + + A  A+  
Sbjct: 927  IIKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVID 986

Query: 486  -DKMTIGTRYVEL 521
             +   IG+R V+L
Sbjct: 987  LNDRPIGSRKVKL 999



 Score = 42.0 bits (97), Expect = 0.001
 Identities = 23/78 (29%), Positives = 43/78 (55%)
 Frame = +3

Query: 309 LKLRGLPYSATIEDIIKFFVEYELTEDNVHIAYRSDGKATGEAFVEFPTAEVAKTAMCKD 488
           + + G+P+SA   D+ +FF  + L  D VH+     G+  G   V+F + +    A+ ++
Sbjct: 306 VSVHGMPFSAMENDVREFF--HGLRVDAVHLLKDHVGRNNGNGLVKFLSPQDTFEALKRN 363

Query: 489 KMTIGTRYVELFPSTPEE 542
           +M +  RYVE+ P+T  +
Sbjct: 364 RMLMIQRYVEVSPATERQ 381



 Score = 40.8 bits (94), Expect = 0.003
 Identities = 29/79 (36%), Positives = 38/79 (48%)
 Frame = +3

Query: 306 VLKLRGLPYSATIEDIIKFFVEYELTEDNVHIAYRSDGKATGEAFVEFPTAEVAKTAMCK 485
           V++L+GLP  A   DI  FF    + +  VHI     G   GEAF+ F T E A+  M +
Sbjct: 4   VIRLQGLPIVAGTMDIRHFFSGLTIPDGGVHIV----GGELGEAFIVFATDEDARLGMMR 59

Query: 486 DKMTIGTRYVELFPSTPEE 542
              TI    V L  S+  E
Sbjct: 60  TGGTIKGSKVTLLLSSKTE 78

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>GRSF1_HUMAN (Q12849) G-rich sequence factor 1 (GRSF-1)|
          Length = 447

 Score = 79.3 bits (194), Expect = 8e-15
 Identities = 53/166 (31%), Positives = 81/166 (48%), Gaps = 1/166 (0%)
 Frame = +3

Query: 48  NGRFSGEAFVVFPSSMQAEFALHRNRQNMGRRYVEVFRCKKQEYYSAIAAEVNQGGALLE 227
           +G+  G+A +   S    + AL ++R  MG+RYVEV+    ++             AL++
Sbjct: 156 DGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVYEINNEDV-----------DALMK 204

Query: 228 XXXXXXXXXXXXXXXXXDKSSMEYTE-VLKLRGLPYSATIEDIIKFFVEYELTEDNVHIA 404
                             KSS    + V++LRGLPYS   +DI+ FF    + +    + 
Sbjct: 205 SLQV--------------KSSPVVNDGVVRLRGLPYSCNEKDIVDFFAGLNIVDITFVMD 250

Query: 405 YRSDGKATGEAFVEFPTAEVAKTAMCKDKMTIGTRYVELFPSTPEE 542
           YR   K TGEA+V+F   E+A  A+ K +  IG RY+E+FPS   E
Sbjct: 251 YRGRRK-TGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNE 295



 Score = 72.4 bits (176), Expect = 1e-12
 Identities = 55/187 (29%), Positives = 80/187 (42%), Gaps = 30/187 (16%)
 Frame = +3

Query: 54  RFSGEAFVVFPSSMQAEFALHRNRQNMGRRYVEVFRCKKQEYYSAIAA------------ 197
           R +GEA+V F     A  AL ++R+ +G RY+E+F  ++ E  + + +            
Sbjct: 255 RKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVRTHVGSYKGKKIASFPTA 314

Query: 198 -------------EVNQGGALL-----EXXXXXXXXXXXXXXXXXDKSSMEYTEVLKLRG 323
                        EVN+    +     E                 D  +      + +RG
Sbjct: 315 KYITEPEMVFEEHEVNEDIQPMTAFESEKEIELPKEVPEKLPEAADFGTTSSLHFVHMRG 374

Query: 324 LPYSATIEDIIKFFVEYELTEDNVHIAYRSDGKATGEAFVEFPTAEVAKTAMCKDKMTIG 503
           LP+ A  +DII FF    L    + + Y S GKATGEA V F T E A  AM KD+  + 
Sbjct: 375 LPFQANAQDIINFFAP--LKPVRITMEYSSSGKATGEADVHFETHEDAVAAMLKDRSHVH 432

Query: 504 TRYVELF 524
            RY+ELF
Sbjct: 433 HRYIELF 439



 Score = 58.2 bits (139), Expect = 2e-08
 Identities = 26/81 (32%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
 Frame = +3

Query: 306 VLKLRGLPYSATIEDIIKFFVEYELT--EDNVHIAYRSDGKATGEAFVEFPTAEVAKTAM 479
           +++ +GLP+S T+ED++ FF +  +   E+ +H     DGK  G+A +E  + +  + A+
Sbjct: 118 LIRAQGLPWSCTMEDVLNFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQDVQKAL 177

Query: 480 CKDKMTIGTRYVELFPSTPEE 542
            K +M +G RYVE++    E+
Sbjct: 178 EKHRMYMGQRYVEVYEINNED 198

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>GRSF1_MOUSE (Q8C5Q4) G-rich sequence factor 1 (GRSF-1)|
          Length = 479

 Score = 78.6 bits (192), Expect = 1e-14
 Identities = 49/165 (29%), Positives = 79/165 (47%)
 Frame = +3

Query: 48  NGRFSGEAFVVFPSSMQAEFALHRNRQNMGRRYVEVFRCKKQEYYSAIAAEVNQGGALLE 227
           +G+  G+A +   S    + AL ++R  MG+RYVEV+    ++  + + +   +   +L 
Sbjct: 188 DGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVYEINNEDVDALMKSLQVKPSPVLS 247

Query: 228 XXXXXXXXXXXXXXXXXDKSSMEYTEVLKLRGLPYSATIEDIIKFFVEYELTEDNVHIAY 407
                                     V++LRGLPYS   +DI+ FF    + +    + Y
Sbjct: 248 DG------------------------VVRLRGLPYSCNEKDIVDFFAGLNIVDITFVMDY 283

Query: 408 RSDGKATGEAFVEFPTAEVAKTAMCKDKMTIGTRYVELFPSTPEE 542
           R   K TGEA+V+F   E+A  A+ K +  IG RY+E+FPS   E
Sbjct: 284 RGRRK-TGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNE 327



 Score = 72.4 bits (176), Expect = 1e-12
 Identities = 54/187 (28%), Positives = 80/187 (42%), Gaps = 30/187 (16%)
 Frame = +3

Query: 54  RFSGEAFVVFPSSMQAEFALHRNRQNMGRRYVEVFRCKKQEYYSAIAA------------ 197
           R +GEA+V F     A  AL ++R+ +G RY+E+F  ++ E  + + +            
Sbjct: 287 RKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVRTHVGSHKGKKMTSSPPT 346

Query: 198 -------------EVNQGGALLEXXXXXXXXXXXXXXX-----XXDKSSMEYTEVLKLRG 323
                        EVN+    +                       D  ++     + +RG
Sbjct: 347 KYITEPEVVFEEHEVNEDIRPMTAFESDKEIELPKEMSEKLPEAVDFGTLPSLHFVHMRG 406

Query: 324 LPYSATIEDIIKFFVEYELTEDNVHIAYRSDGKATGEAFVEFPTAEVAKTAMCKDKMTIG 503
           LP+ A  +DII FF    L    + + Y S GKATGEA V F T E A  AM KD+  + 
Sbjct: 407 LPFQANAQDIINFFAP--LKPVRITMEYSSSGKATGEADVHFDTHEDAVAAMLKDRSHVQ 464

Query: 504 TRYVELF 524
            RY+ELF
Sbjct: 465 HRYIELF 471



 Score = 59.7 bits (143), Expect = 7e-09
 Identities = 26/81 (32%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
 Frame = +3

Query: 306 VLKLRGLPYSATIEDIIKFFVEYEL--TEDNVHIAYRSDGKATGEAFVEFPTAEVAKTAM 479
           +++ +GLP+S T+ED++ FF +  +  +E+ +H     DGK  G+A +E  + +  + A+
Sbjct: 150 LIRAQGLPWSCTVEDVLNFFSDCRIRNSENGIHFLLNRDGKRRGDALIEMESEQDVQKAL 209

Query: 480 CKDKMTIGTRYVELFPSTPEE 542
            K +M +G RYVE++    E+
Sbjct: 210 EKHRMYMGQRYVEVYEINNED 230

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>HNRH3_HUMAN (P31942) Heterogeneous nuclear ribonucleoprotein H3 (hnRNP H3)|
           (hnRNP 2H9)
          Length = 346

 Score = 68.9 bits (167), Expect = 1e-11
 Identities = 31/78 (39%), Positives = 52/78 (66%)
 Frame = +3

Query: 309 LKLRGLPYSATIEDIIKFFVEYELTEDNVHIAYRSDGKATGEAFVEFPTAEVAKTAMCKD 488
           ++LRGLP+  + E+I++FF   E+  + + +     G++TGEAFV+F + E+A+ A+ K 
Sbjct: 18  VRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTMDYQGRSTGEAFVQFASKEIAENALGKH 77

Query: 489 KMTIGTRYVELFPSTPEE 542
           K  IG RY+E+F S+  E
Sbjct: 78  KERIGHRYIEIFRSSRSE 95



 Score = 64.3 bits (155), Expect = 3e-10
 Identities = 40/75 (53%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
 Frame = +3

Query: 315 LRGLPYSATIEDIIKFFVEYELTEDNVHIAYRSDGKATGEAFVEFPTAEVAKTAMCKDKM 494
           +RGLP+ AT  DI  FF    L    VHI   +DG+ATGEA VEF T E A  AM KDK 
Sbjct: 199 MRGLPFRATENDIANFFSP--LNPIRVHIDIGADGRATGEADVEFVTHEDAVAAMSKDKN 256

Query: 495 TIGTRYVELF-PSTP 536
            +  RY+ELF  STP
Sbjct: 257 NMQHRYIELFLNSTP 271



 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 20/42 (47%), Positives = 29/42 (69%)
 Frame = +3

Query: 51  GRFSGEAFVVFPSSMQAEFALHRNRQNMGRRYVEVFRCKKQE 176
           GR +GEAFV F S   AE AL ++++ +G RY+E+FR  + E
Sbjct: 54  GRSTGEAFVQFASKEIAENALGKHKERIGHRYIEIFRSSRSE 95



 Score = 32.7 bits (73), Expect = 0.91
 Identities = 15/37 (40%), Positives = 24/37 (64%)
 Frame = +3

Query: 48  NGRFSGEAFVVFPSSMQAEFALHRNRQNMGRRYVEVF 158
           +GR +GEA V F +   A  A+ +++ NM  RY+E+F
Sbjct: 230 DGRATGEADVEFVTHEDAVAAMSKDKNNMQHRYIELF 266

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>RBM19_HUMAN (Q9Y4C8) Probable RNA-binding protein 19 (RNA-binding motif protein|
           19)
          Length = 960

 Score = 46.6 bits (109), Expect = 6e-05
 Identities = 49/172 (28%), Positives = 72/172 (41%), Gaps = 5/172 (2%)
 Frame = +3

Query: 48  NGRFSGEAFVVFPSSMQAEFALHRNRQNMGRRYVEVFRCKKQEYYSAIAAEVN---QGGA 218
           +G  +G  FV F +  + + AL  NR+ MG RY+EVFR K                QG  
Sbjct: 329 HGNKTGYIFVDFSNEEEVKQALKCNREYMGGRYIEVFREKNVPTTKGAPKNTTKSWQGRI 388

Query: 219 LLEXXXXXXXXXXXXXXXXXDKSSMEYTEVLKLRGLPYSATIEDIIKFFVEYELTEDNVH 398
           L E                 ++  +  +  L +R LPY++T ED+ K F +Y    +  +
Sbjct: 389 LGE---------------NEEEEDLAESGRLFVRNLPYTSTEEDLEKLFSKYGPLSELHY 433

Query: 399 IAYRSDGKATGEAFVEFPTAEVAKTAMCK-DKMTIGTRYVELFPST-PEEAS 548
                  K  G AF+ F   E A  A  + D      R + + PST  +EAS
Sbjct: 434 PIDSLTKKPKGFAFITFMFPEHAVKAYSEVDGQVFQGRMLHVLPSTIKKEAS 485



 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 24/85 (28%), Positives = 44/85 (51%)
 Frame = +3

Query: 309 LKLRGLPYSATIEDIIKFFVEYELTEDNVHIAYRSDGKATGEAFVEFPTAEVAKTAMCKD 488
           +KLRG P++ T +++++F     L    + I   + G  TG  FV+F   E  K A+  +
Sbjct: 296 VKLRGAPFNVTEKNVMEFLAP--LKPVAIRIVRNAHGNKTGYIFVDFSNEEEVKQALKCN 353

Query: 489 KMTIGTRYVELFPSTPEEASRAKPR 563
           +  +G RY+E+F       ++  P+
Sbjct: 354 REYMGGRYIEVFREKNVPTTKGAPK 378

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>RBM19_MOUSE (Q8R3C6) Probable RNA-binding protein 19 (RNA-binding motif protein|
           19)
          Length = 952

 Score = 45.8 bits (107), Expect = 1e-04
 Identities = 25/85 (29%), Positives = 44/85 (51%)
 Frame = +3

Query: 309 LKLRGLPYSATIEDIIKFFVEYELTEDNVHIAYRSDGKATGEAFVEFPTAEVAKTAMCKD 488
           +KLRG P++ T +++I+F     L    + I   + G  TG  FV+  + E  K A+  +
Sbjct: 295 VKLRGAPFNVTEKNVIEFLAP--LKPVAIRIVRNAHGNKTGYVFVDLSSEEEVKKALKCN 352

Query: 489 KMTIGTRYVELFPSTPEEASRAKPR 563
           +  +G RY+E+F       +R  P+
Sbjct: 353 RDYMGGRYIEVFREKQAPTARGPPK 377



 Score = 40.8 bits (94), Expect = 0.003
 Identities = 48/172 (27%), Positives = 70/172 (40%), Gaps = 4/172 (2%)
 Frame = +3

Query: 48  NGRFSGEAFVVFPSSMQAEFALHRNRQNMGRRYVEVFRCKKQEYYSAIAAEVN--QGGAL 221
           +G  +G  FV   S  + + AL  NR  MG RY+EVFR K+              QG  L
Sbjct: 328 HGNKTGYVFVDLSSEEEVKKALKCNRDYMGGRYIEVFREKQAPTARGPPKSTTPWQGRTL 387

Query: 222 LEXXXXXXXXXXXXXXXXXDKSSMEYTEVLKLRGLPYSATIEDIIKFFVEYELTEDNVHI 401
            E                 ++  +  +  L +R L Y+++ ED+ K F  Y    +  + 
Sbjct: 388 GE---------------NEEEEDLADSGRLFVRNLSYTSSEEDLEKLFSAYGPLSELHYP 432

Query: 402 AYRSDGKATGEAFVEFPTAEVAKTAMCK-DKMTIGTRYVELFPST-PEEASR 551
                 K  G AFV F   E A  A  + D      R + + PST  +EAS+
Sbjct: 433 IDSLTKKPKGFAFVTFMFPEHAVKAYAEVDGQVFQGRMLHVLPSTIKKEASQ 484

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>NUCL_CHICK (P15771) Nucleolin (Protein C23)|
          Length = 694

 Score = 40.4 bits (93), Expect = 0.004
 Identities = 32/134 (23%), Positives = 56/134 (41%)
 Frame = +3

Query: 78  VFPSSMQAEFALHRNRQNMGRRYVEVFRCKKQEYYSAIAAEVNQGGALLEXXXXXXXXXX 257
           VF ++++    L++   + G  Y+E     K E  +  A E  QG  +            
Sbjct: 390 VFENALEVRLVLNKEGSSKGMAYIEF----KTEAEAEKALEEKQGTEVDGRAMVIDYTGE 445

Query: 258 XXXXXXXDKSSMEYTEVLKLRGLPYSATIEDIIKFFVEYELTEDNVHIAYRSDGKATGEA 437
                         ++ L +  L Y+A+ E + + F +      ++ +   + G+  G A
Sbjct: 446 KSQQESQKGGGERESKTLIVNNLSYAASEETLQELFKK----ATSIKMPQNNQGRPKGYA 501

Query: 438 FVEFPTAEVAKTAM 479
           FVEFPTAE AK A+
Sbjct: 502 FVEFPTAEDAKEAL 515

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>PROP_MOUSE (P11680) Properdin precursor (Factor P)|
          Length = 464

 Score = 37.0 bits (84), Expect = 0.048
 Identities = 50/158 (31%), Positives = 62/158 (39%), Gaps = 22/158 (13%)
 Frame = -3

Query: 507 WYRWSSY-PCTWQSLQPRPSGTPQRPRQWPSHPSGTRCAHCPPSARTPQ-----RT**CP 346
           W  W  + PC+    +    GT  R R    +P+     HCP  A+  Q     +T  CP
Sbjct: 135 WSEWGPWGPCSVTCSK----GTQIRQRVC-DNPAPKCGGHCPGEAQQSQACDTQKT--CP 187

Query: 345 LWWRSKGAHAASAPQCTPCC-SCLQTASWAVE-EARSAGAQARGEHHPGSPQRLLRCSIP 172
               + GA A+  P  +PC  SCL  A    E  +RS  A A     PG P     CS P
Sbjct: 188 ----THGAWASWGPW-SPCSGSCLGGAQEPKETRSRSCSAPAPSHQPPGKP-----CSGP 237

Query: 171 A----SCI*KPP----------RTSCPCSACCGAAQTL 100
           A    +C   PP              PCS  CG  QTL
Sbjct: 238 AYEHKACSGLPPCPVAGGWGPWSPLSPCSVTCGLGQTL 275

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>NUCL_MESAU (P08199) Nucleolin (Protein C23)|
          Length = 713

 Score = 35.8 bits (81), Expect = 0.11
 Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
 Frame = +3

Query: 300 TEVLKLRGLPYSATIEDIIKFFVEYELTEDNVHIAYRSDGKATGEAFVEFPTAEVAKTAM 479
           ++ L L  L YSAT E + + F +       + +     GK+ G AF+EF + E AK A+
Sbjct: 484 SKTLVLSNLSYSATEETLQEVFEKATF----IKVPQNQQGKSKGYAFIEFASFEDAKEAL 539

Query: 480 CK-DKMTIGTRYVELFPSTPEEASRAK 557
              +KM I  R + L    P  +  A+
Sbjct: 540 NSCNKMEIEGRTIRLELQGPRGSPNAR 566



 Score = 30.0 bits (66), Expect = 5.9
 Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 2/102 (1%)
 Frame = +3

Query: 279 DKSSMEYTEVLKLRGLPYSATIEDIIKFFVEYELTEDNVHIAYRS-DGKATGEAFVEFPT 455
           D   +     L  + L ++ T ED +K     E+ ED + I   S DGK+ G A++EF +
Sbjct: 385 DSKKVRAARTLLAKNLSFNIT-EDELK-----EVFEDALEIRLVSQDGKSKGIAYIEFKS 438

Query: 456 -AEVAKTAMCKDKMTIGTRYVELFPSTPEEASRAKPRGRH*T 578
            A+  K    K    I  R V L+  T E+  R +  G++ T
Sbjct: 439 EADAEKNLEEKQGAEIDGRSVSLY-YTGEKGQRQERTGKNST 479

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>NUCL_XENLA (P20397) Nucleolin (Protein C23)|
          Length = 650

 Score = 35.4 bits (80), Expect = 0.14
 Identities = 34/134 (25%), Positives = 55/134 (41%)
 Frame = +3

Query: 78  VFPSSMQAEFALHRNRQNMGRRYVEVFRCKKQEYYSAIAAEVNQGGALLEXXXXXXXXXX 257
           +F ++        ++  N G  YVE       E  +  A E  QG  +            
Sbjct: 343 IFENAKDIRIPTGKDGSNKGIAYVEF----SNEDEANKALEEKQGAEIEGRSIFVDFTGE 398

Query: 258 XXXXXXXDKSSMEYTEVLKLRGLPYSATIEDIIKFFVEYELTEDNVHIAYRSDGKATGEA 437
                   K     ++VL +  L YSAT + + + F +      ++ I  ++ G+A G A
Sbjct: 399 KSQNSGNKKGPEGDSKVLVVNNLSYSATEDSLREVFEK----ATSIRIP-QNQGRAKGFA 453

Query: 438 FVEFPTAEVAKTAM 479
           F+EF +AE AK AM
Sbjct: 454 FIEFSSAEDAKDAM 467



 Score = 32.3 bits (72), Expect = 1.2
 Identities = 17/60 (28%), Positives = 31/60 (51%)
 Frame = +3

Query: 300 TEVLKLRGLPYSATIEDIIKFFVEYELTEDNVHIAYRSDGKATGEAFVEFPTAEVAKTAM 479
           +  L ++ +PYS T+E++ + F   +    ++ I    DG   G A+VEF   + A  A+
Sbjct: 323 SRTLFVKNIPYSTTVEELQEIFENAK----DIRIPTGKDGSNKGIAYVEFSNEDEANKAL 378

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>MRD1_CANAL (Q5AJS6) Multiple RNA-binding domain-containing protein 1|
          Length = 841

 Score = 35.4 bits (80), Expect = 0.14
 Identities = 35/120 (29%), Positives = 55/120 (45%), Gaps = 3/120 (2%)
 Frame = +3

Query: 129  NMGRRYVEVFRCKKQEYY--SAIAAEVNQGGAL-LEXXXXXXXXXXXXXXXXXDKSSMEY 299
            +MG  +VE FR K+Q     S +   V  G  L L+                  KSS   
Sbjct: 662  SMGFGFVE-FRTKEQANVAISTLDGHVLDGHKLQLKLSHKQGTGTSASSIKKSGKSSK-- 718

Query: 300  TEVLKLRGLPYSATIEDIIKFFVEYELTEDNVHIAYRSDGKATGEAFVEFPTAEVAKTAM 479
               + ++ LP+ AT +D+++ F  +   + +V +  + D  A G AFVEF   + A+TAM
Sbjct: 719  ---IIIKNLPFEATRKDLLELFGAFGQLK-SVRVPKKFDQSARGFAFVEFNLMKEAETAM 774

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>NUCL_RAT (P13383) Nucleolin (Protein C23)|
          Length = 712

 Score = 35.0 bits (79), Expect = 0.18
 Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
 Frame = +3

Query: 300 TEVLKLRGLPYSATIEDIIKFFVEYELTEDNVHIAYRSDGKATGEAFVEFPTAEVAKTAM 479
           ++ L L  L YSAT E + + F +       + +     GK+ G AF+EF + E AK A+
Sbjct: 487 SKTLVLSNLSYSATEETLQEVFEKATF----IKVPQNPHGKSKGYAFIEFASFEDAKEAL 542

Query: 480 CK-DKMTIGTRYVELFPSTPEEASRAK 557
              +KM I  R + L    P  +  A+
Sbjct: 543 NSCNKMEIEGRTIRLELQGPRGSPNAR 569

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>NUCL_PONPY (Q5RF26) Nucleolin|
          Length = 711

 Score = 33.9 bits (76), Expect = 0.41
 Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
 Frame = +3

Query: 300 TEVLKLRGLPYSATIEDIIKFFVEYELTEDNVHIAYRSDGKATGEAFVEFPTAEVAKTAM 479
           ++ L L  L YSAT E + + F +       + +    +GK+ G AF+EF + E AK A+
Sbjct: 486 SKTLVLSNLSYSATEETLQEVFEKATF----IKVPQNQNGKSKGYAFIEFASFEDAKEAL 541

Query: 480 CK-DKMTIGTRYVELFPSTPEEASRAK 557
              +K  I  R + L    P  +  A+
Sbjct: 542 NSCNKREIEGRAIRLELQGPRGSPNAR 568



 Score = 32.3 bits (72), Expect = 1.2
 Identities = 30/98 (30%), Positives = 42/98 (42%), Gaps = 2/98 (2%)
 Frame = +3

Query: 279 DKSSMEYTEVLKLRGLPYSATIEDIIKFFVEYELTEDNVHIAYRS-DGKATGEAFVEFPT 455
           D         L  + LPY  T +++ + F      ED   I   S DGK+ G A++EF T
Sbjct: 386 DSKKERDARTLLAKNLPYKVTQDELKEVF------EDAAEIRLVSKDGKSKGIAYIEFKT 439

Query: 456 -AEVAKTAMCKDKMTIGTRYVELFPSTPEEASRAKPRG 566
            A+  KT   K    I  R + L+  T E+      RG
Sbjct: 440 EADAEKTFEEKQGTEIDGRSISLY-YTGEKGQNQDYRG 476

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>NUCL_MACFA (Q4R4J7) Nucleolin|
          Length = 710

 Score = 33.9 bits (76), Expect = 0.41
 Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
 Frame = +3

Query: 300 TEVLKLRGLPYSATIEDIIKFFVEYELTEDNVHIAYRSDGKATGEAFVEFPTAEVAKTAM 479
           ++ L L  L YSAT E + + F +       + +    +GK+ G AF+EF + E AK A+
Sbjct: 485 SKTLVLSNLSYSATEETLQEVFEKATF----IKVPQNQNGKSKGYAFIEFASFEDAKEAL 540

Query: 480 CK-DKMTIGTRYVELFPSTPEEASRAK 557
              +K  I  R + L    P  +  A+
Sbjct: 541 NSCNKREIEGRAIRLELQGPRGSPNAR 567



 Score = 32.3 bits (72), Expect = 1.2
 Identities = 30/98 (30%), Positives = 42/98 (42%), Gaps = 2/98 (2%)
 Frame = +3

Query: 279 DKSSMEYTEVLKLRGLPYSATIEDIIKFFVEYELTEDNVHIAYRS-DGKATGEAFVEFPT 455
           D         L  + LPY  T +++ + F      ED   I   S DGK+ G A++EF T
Sbjct: 385 DSKKERDARTLLAKNLPYKVTQDELKEVF------EDAAEIRLVSKDGKSKGIAYIEFKT 438

Query: 456 -AEVAKTAMCKDKMTIGTRYVELFPSTPEEASRAKPRG 566
            A+  KT   K    I  R + L+  T E+      RG
Sbjct: 439 EADAEKTFEEKQGTEIDGRSISLY-YTGEKGQNQDYRG 475

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>RNPC1_HUMAN (Q9H0Z9) RNA-binding region-containing protein 1 (HSRNASEB) (ssDNA|
           binding protein SEB4) (CLL-associated antigen KW-5)
          Length = 216

 Score = 33.9 bits (76), Expect = 0.41
 Identities = 21/56 (37%), Positives = 27/56 (48%)
 Frame = +3

Query: 321 GLPYSATIEDIIKFFVEYELTEDNVHIAYRSDGKATGEAFVEFPTAEVAKTAMCKD 488
           GLPY  T   + K+F  +   E+ V I  R  GK+ G  FV       A+ A CKD
Sbjct: 17  GLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERA-CKD 71

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>NUCL_HUMAN (P19338) Nucleolin (Protein C23)|
          Length = 709

 Score = 33.9 bits (76), Expect = 0.41
 Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
 Frame = +3

Query: 300 TEVLKLRGLPYSATIEDIIKFFVEYELTEDNVHIAYRSDGKATGEAFVEFPTAEVAKTAM 479
           ++ L L  L YSAT E + + F +       + +    +GK+ G AF+EF + E AK A+
Sbjct: 484 SKTLVLSNLSYSATEETLQEVFEKATF----IKVPQNQNGKSKGYAFIEFASFEDAKEAL 539

Query: 480 CK-DKMTIGTRYVELFPSTPEEASRAK 557
              +K  I  R + L    P  +  A+
Sbjct: 540 NSCNKREIEGRAIRLELQGPRGSPNAR 566



 Score = 32.3 bits (72), Expect = 1.2
 Identities = 30/98 (30%), Positives = 42/98 (42%), Gaps = 2/98 (2%)
 Frame = +3

Query: 279 DKSSMEYTEVLKLRGLPYSATIEDIIKFFVEYELTEDNVHIAYRS-DGKATGEAFVEFPT 455
           D         L  + LPY  T +++ + F      ED   I   S DGK+ G A++EF T
Sbjct: 384 DSKKERDARTLLAKNLPYKVTQDELKEVF------EDAAEIRLVSKDGKSKGIAYIEFKT 437

Query: 456 -AEVAKTAMCKDKMTIGTRYVELFPSTPEEASRAKPRG 566
            A+  KT   K    I  R + L+  T E+      RG
Sbjct: 438 EADAEKTFEEKQGTEIDGRSISLY-YTGEKGQNQDYRG 474

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>EST_ACILW (P18773) Esterase (EC 3.1.1.-)|
          Length = 303

 Score = 33.5 bits (75), Expect = 0.53
 Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
 Frame = -1

Query: 569 PAPRLRPARLLGSRGEQLHVPGTDGHLIL-AHGSLCNLGRRELHKGLASGLPIRAVRDV 396
           P  ++RP RL G RGE++    +   LI   HG    LG    H+ L + L  R    V
Sbjct: 48  PTVQIRPIRLAGVRGEEIKAQASATQLIFHIHGGAFFLGSLNTHRALMTDLASRTQMQV 106

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>BLVR_BOVIN (Q03368) Bovine leukemia virus cell receptor precursor (BLV-R)|
            (BLVPCP1)
          Length = 843

 Score = 33.5 bits (75), Expect = 0.53
 Identities = 31/117 (26%), Positives = 36/117 (30%), Gaps = 28/117 (23%)
 Frame = -3

Query: 501  RWSSYPCTWQS--LQPRPSGTPQRPRQWPSHPSGTRCAHCPPS----------------A 376
            RW  +P  W    L P P GT       P H  G   A C PS                 
Sbjct: 688  RWRPWPAAWGDIPLHPTPRGTSS-----PGHTMGQSLAGCRPSHPVCSTTVSCSAEGSAQ 742

Query: 375  RTPQRT**CPL-----WWRSKGAHAASAPQCTPCCSCLQTASWA-----VEEARSAG 235
            R P     CP      WWR+      S+      C C    +W        EAR +G
Sbjct: 743  RGPGPWPPCPAACCGEWWRATALALLSSLDALQVCVCTCGRAWVPGLFPCWEARGSG 799

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>RNPC1_MOUSE (Q62176) RNA-binding region-containing protein 1 (ssDNA binding|
           protein SEB4)
          Length = 237

 Score = 33.1 bits (74), Expect = 0.70
 Identities = 21/56 (37%), Positives = 26/56 (46%)
 Frame = +3

Query: 321 GLPYSATIEDIIKFFVEYELTEDNVHIAYRSDGKATGEAFVEFPTAEVAKTAMCKD 488
           GLPY  T   + K+F  +   E+ V I  R  GK+ G  FV       A  A CKD
Sbjct: 38  GLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAADRA-CKD 92

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>ROC5_NICSY (P19684) 33 kDa ribonucleoprotein, chloroplast precursor|
          Length = 324

 Score = 33.1 bits (74), Expect = 0.70
 Identities = 29/84 (34%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
 Frame = +3

Query: 309 LKLRGLPYSATIEDIIKFFVEYELTEDNVHIAY-RSDGKATGEAFVEFPTAEVAKTAM-C 482
           L +  LP+S T   + + F E   T  NV I Y R   ++ G AFV   + E AK A+  
Sbjct: 116 LYVGNLPFSMTSSQLSEIFAEAG-TVANVEIVYDRVTDRSRGFAFVTMGSVEEAKEAIRL 174

Query: 483 KDKMTIGTRYVEL-FPSTPEEASR 551
            D   +G R V++ FP  P    R
Sbjct: 175 FDGSQVGGRTVKVNFPEVPRGGER 198

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>ZN575_MOUSE (Q3TXZ1) Zinc finger protein 575|
          Length = 239

 Score = 32.7 bits (73), Expect = 0.91
 Identities = 33/119 (27%), Positives = 45/119 (37%), Gaps = 4/119 (3%)
 Frame = -3

Query: 465 QPRPSGT-PQRPRQWPSHPSGTRCAHCPPSARTPQRT**CPLWWRSKGAHAASAPQCTPC 289
           QP  SG+ P RPR+ P      RC  CP +   P +          + AH  + P   PC
Sbjct: 36  QPAASGSVPSRPRRRPPPQRPHRCPDCPKAFSYPSKL------ATHRLAHGGTRPH--PC 87

Query: 288 CSCLQTASWAVEEA--RSAGAQARGEHHPGSPQRL-LRCSIPASCI*KPPRTSCPCSAC 121
             C +  S+  + A  R   + AR    P  P+    R  + A      P    PC  C
Sbjct: 88  PDCPKAFSYPSKLAAHRLTHSGARPHSCPHCPKAFGHRSKLAAHLWTHAPARPYPCPDC 146

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>PK3C3_XENLA (Q6AZN6) Phosphatidylinositol 3-kinase catalytic subunit type 3 (EC|
           2.7.1.137) (PtdIns-3-kinase type 3) (PI3-kinase type 3)
           (PI3K type 3) (Phosphoinositide-3-kinase class 3)
          Length = 886

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
 Frame = -2

Query: 178 YSCFLHLKTSTYLLPMFCLLRCSAN--SACMDEGKTTKASPEK-RPXLVDQEAVHYV 17
           Y+ FLHL+  + L+     L   AN     ++  KT K   +K R  L D+EAVHY+
Sbjct: 802 YTAFLHLRRYSNLILNLFSLMVDANIPDIALEPDKTVKKVQDKFRLDLSDEEAVHYM 858

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>Y371_MYCPN (P75410) Hypothetical protein MPN371 (A19_orf211)|
          Length = 211

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 21/72 (29%), Positives = 27/72 (37%), Gaps = 2/72 (2%)
 Frame = -3

Query: 429 QWPSHPSGTRC-AHCPPSARTPQRT**CPLWWR-SKGAHAASAPQCTPCCSCLQTASWAV 256
           QWP  P    C + CPP   +P      P WW+    +  A+    TP  +   T   A 
Sbjct: 112 QWPQRPGVFHCSSRCPPRRSSPSSQ-TLPRWWKYFDHSRFAAVVSPTPFATAHSTPRCAA 170

Query: 255 EEARSAGAQARG 220
              R  G   RG
Sbjct: 171 RVKRQTGRDWRG 182

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>K1H8_HUMAN (O76015) Keratin, type I cuticular Ha8 (Hair keratin, type I Ha8)|
          Length = 456

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 17/33 (51%), Positives = 20/33 (60%), Gaps = 6/33 (18%)
 Frame = -3

Query: 183 CSIPASCI*KP--PRTSC-PCSAC---CGAAQT 103
           CS P SC+  P  PR SC PC+ C   CGA+ T
Sbjct: 420 CSTPPSCVTAPCAPRPSCGPCTTCGPTCGASTT 452

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>EPDR1_MACFA (Q9N0C7) Mammalian ependymin-related protein 1 precursor (MERP-1)|
           (UCC1 protein)
          Length = 224

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 27/63 (42%), Positives = 32/63 (50%)
 Frame = +2

Query: 8   LGWXIVDCLLVHKXWALLWRGLCCLPFVHASRVCAAPQQAEHGQEVRGGFQMQEAGILQR 187
           LG  ++ CL     WA    GLC L  V A R C APQQ E G++V      Q +G   R
Sbjct: 14  LGPWLLGCL-----WAWTLCGLCSLGAVGAPRPCQAPQQWE-GRQV---MYQQSSG---R 61

Query: 188 NSR 196
           NSR
Sbjct: 62  NSR 64

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>PK3C3_RAT (O88763) Phosphatidylinositol 3-kinase catalytic subunit type 3 (EC|
           2.7.1.137) (PtdIns-3-kinase type 3) (PI3-kinase type 3)
           (PI3K type 3) (Phosphoinositide-3-kinase class 3)
          Length = 887

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
 Frame = -2

Query: 178 YSCFLHLKTSTYLLPMFCLLRCSAN--SACMDEGKTTKASPEK-RPXLVDQEAVHYV 17
           Y+ FLHL+  + L+     L   AN     ++  KT K   +K R  L D+EAVHY+
Sbjct: 803 YTAFLHLRRYSNLILNLFSLMVDANIPDIALEPDKTVKKVQDKFRLDLSDEEAVHYM 859

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>PK3C3_PIG (Q5D891) Phosphatidylinositol 3-kinase catalytic subunit type 3 (EC|
           2.7.1.137) (PtdIns-3-kinase type 3) (PI3-kinase type 3)
           (PI3K type 3) (Phosphoinositide-3-kinase class 3)
          Length = 887

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
 Frame = -2

Query: 178 YSCFLHLKTSTYLLPMFCLLRCSAN--SACMDEGKTTKASPEK-RPXLVDQEAVHYV 17
           Y+ FLHL+  + L+     L   AN     ++  KT K   +K R  L D+EAVHY+
Sbjct: 803 YTAFLHLRRYSNLILNLFSLMVDANIPDIALEPDKTVKKVQDKFRLDLSDEEAVHYM 859

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>PK3C3_MOUSE (Q6PF93) Phosphatidylinositol 3-kinase catalytic subunit type 3 (EC|
           2.7.1.137) (PtdIns-3-kinase type 3) (PI3-kinase type 3)
           (PI3K type 3) (Phosphoinositide-3-kinase class 3)
          Length = 887

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
 Frame = -2

Query: 178 YSCFLHLKTSTYLLPMFCLLRCSAN--SACMDEGKTTKASPEK-RPXLVDQEAVHYV 17
           Y+ FLHL+  + L+     L   AN     ++  KT K   +K R  L D+EAVHY+
Sbjct: 803 YTAFLHLRRYSNLILNLFSLMVDANIPDIALEPDKTVKKVQDKFRLDLSDEEAVHYM 859

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>PK3C3_HUMAN (Q8NEB9) Phosphatidylinositol 3-kinase catalytic subunit type 3 (EC|
           2.7.1.137) (PtdIns-3-kinase type 3) (PI3-kinase type 3)
           (PI3K type 3) (Phosphoinositide-3-kinase class 3)
           (Phosphatidylinositol 3-kinase p100 subunit)
          Length = 887

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
 Frame = -2

Query: 178 YSCFLHLKTSTYLLPMFCLLRCSAN--SACMDEGKTTKASPEK-RPXLVDQEAVHYV 17
           Y+ FLHL+  + L+     L   AN     ++  KT K   +K R  L D+EAVHY+
Sbjct: 803 YTAFLHLRRYSNLILNLFSLMVDANIPDIALEPDKTVKKVQDKFRLDLSDEEAVHYM 859

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>RNP1_YEAST (P32385) Ribonucleoprotein 1|
          Length = 249

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 9/59 (15%)
 Frame = +3

Query: 300 TEVLKLRGLPYSATIEDIIKFF---------VEYELTEDNVHIAYRSDGKATGEAFVEF 449
           T  L ++ +P  +T ED+ K F         V  EL +   +  + SD   TGEAF++F
Sbjct: 139 TNTLYVKNIPMKSTNEDLAKIFGVDPKNINFVRRELVDLRTNKVFFSDEFHTGEAFIKF 197

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>DNAJ_METCA (Q607A6) Chaperone protein dnaJ|
          Length = 377

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 11/82 (13%)
 Frame = -1

Query: 527 GEQLHVPGTDGHLILAHGSLCNLGR---------RELHKGLASGL--PIRAVRDVHIVLR 381
           G +L VP  DG ++L   +    GR         + +  G+A  L   +R    VH+   
Sbjct: 279 GGELEVPTLDGKVVLKIPAETQTGRLFRVRGKGVKPVRGGVAGDLLCRVRVETPVHLNKE 338

Query: 380 QLVLHKELDDVLYGGGVREPTQ 315
           Q+ L ++LD+ L GGG     Q
Sbjct: 339 QIDLIRQLDESLRGGGSHHSPQ 360

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>WC11_BOVIN (P30205) Antigen WC1.1 precursor|
          Length = 1436

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 7/42 (16%)
 Frame = +2

Query: 338 HHRGHHQVLCGVRAD-------GGQCAHRVPLGWEGHWRGLC 442
           HH G  QV+C   ++         QC  +V +   G WR LC
Sbjct: 224 HHSGSAQVVCSAYSEVRLMTNGSSQCEGQVEMNISGQWRALC 265

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>TRI47_MOUSE (Q8C0E3) Tripartite motif protein 47|
          Length = 641

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 14/32 (43%), Positives = 15/32 (46%)
 Frame = -3

Query: 462 PRPSGTPQRPRQWPSHPSGTRCAHCPPSARTP 367
           P PS  P  P QWP+     RC  CP  A  P
Sbjct: 113 PEPSA-PCAPEQWPAGEEPVRCDACPEGAALP 143

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>YRA1_YEAST (Q12159) RNA annealing protein YRA1|
          Length = 226

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 21/85 (24%), Positives = 37/85 (43%)
 Frame = +3

Query: 309 LKLRGLPYSATIEDIIKFFVEYELTEDNVHIAYRSDGKATGEAFVEFPTAEVAKTAMCKD 488
           + + GLP     + + +FF         V ++Y   G++TG A + F   E+A+      
Sbjct: 80  VNVEGLPRDIKQDAVREFFASQVGGVQRVLLSYNERGQSTGMANITFKNGELAR------ 133

Query: 489 KMTIGTRYVELFPSTPEEASRAKPR 563
                 R VE F  +P +  R++ R
Sbjct: 134 ------RAVERFNGSPIDGGRSRLR 152

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>RIPK5_FUGRU (Q4VSN2) Receptor-interacting serine/threonine-protein kinase 5 (EC|
           2.7.11.1) (Dusty protein kinase) (Dusty PK)
          Length = 921

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = -1

Query: 620 CPSDTQGSASCGKLRSVPAPRLRPARLLGSRGEQLH 513
           CP    G+ SCG    +P P  +P  +LG   E+LH
Sbjct: 299 CP---MGNCSCGAPTQMPTPGAKPQSVLGENFERLH 331

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>EPDR1_HUMAN (Q9UM22) Mammalian ependymin-related protein 1 precursor (MERP-1)|
           (UCC1 protein)
          Length = 224

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 23/49 (46%), Positives = 26/49 (53%)
 Frame = +2

Query: 50  WALLWRGLCCLPFVHASRVCAAPQQAEHGQEVRGGFQMQEAGILQRNSR 196
           WA    GLC L  V A R C APQQ E G++V      Q +G   RNSR
Sbjct: 23  WAWTLCGLCSLGAVGAPRPCQAPQQWE-GRQV---MYQQSSG---RNSR 64

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>DPS1_MOUSE (Q33DR2) Decaprenyl-diphosphate synthase subunit 1 (EC 2.5.1.-)|
           (Decaprenyl pyrophosphate synthetase subunit 1)
           (Solanesyl-diphosphate synthase subunit 1)
           (Trans-prenyltransferase) (TPT)
          Length = 409

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 30/83 (36%), Positives = 38/83 (45%), Gaps = 4/83 (4%)
 Frame = -3

Query: 501 RWSSYP--CTWQSLQPRPSGTPQRPRQWPSHPSGTRCAHCPPSARTPQRT**CPLWWRSK 328
           RWS +   C+W+   P   G+P+R R     P GTR A     A+ P  +    L   S 
Sbjct: 4   RWSCWRRGCSWR---PTAVGSPRRERPGCVEPLGTRAA-SDTRAQIPYFSLMKILMSASP 59

Query: 327 GAHAASA-PQCTPC-CSCLQTAS 265
             H+ S   Q TP  CSC QT S
Sbjct: 60  TMHSISQFHQRTPAMCSCRQTQS 82

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>ENG1_YEAST (P53753) Endo-1,3(4)-beta-glucanase 1 precursor (EC 3.2.1.6)|
           (Endo-1,4-beta-glucanase 1) (Endo-1,3-beta-glucanase 1)
           (Laminarinase-1) (Daughter specific expression protein
           4)
          Length = 1117

 Score = 30.0 bits (66), Expect = 5.9
 Identities = 20/44 (45%), Positives = 25/44 (56%)
 Frame = -2

Query: 445 STKASPVAFPSERYAMCTLSSVSSYSTKNLMMSSMVAE*GSPRS 314
           ST ASP A+PS R  +    SVS YST + +  S + E GS  S
Sbjct: 270 STTASP-AYPSNRTQITLSPSVSLYSTTSPIYPSNITENGSSPS 312

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>TNR4_RAT (P15725) Tumor necrosis factor receptor superfamily member 4|
           precursor (OX40L receptor) (OX40 antigen) (MRC OX40)
          Length = 271

 Score = 29.6 bits (65), Expect = 7.7
 Identities = 22/69 (31%), Positives = 26/69 (37%), Gaps = 7/69 (10%)
 Frame = -3

Query: 438 RPRQWPSHPSGTRCAHCPPSARTPQRT**CPLWWR-----SKGAHAASAPQCTPC--CSC 280
           +PRQ  SH  G  C  CPP   +P     C  W        +  H AS    T C   S 
Sbjct: 109 QPRQDSSHKLGVDCVPCPPGHFSPGSNQACKPWTNCTLSGKQIRHPASNSLDTVCEDRSL 168

Query: 279 LQTASWAVE 253
           L T  W  +
Sbjct: 169 LATLLWETQ 177

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>YI31_AGRT7 (P05680) Insertion element IS136 hypothetical 16.9 kDa protein|
          Length = 159

 Score = 29.6 bits (65), Expect = 7.7
 Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
 Frame = -3

Query: 498 WSSYPCTWQSLQPRPSGTPQRPRQWPSHP--SGTRCAHCPPS 379
           W + PC W+S QP         R W   P  +G R A   P+
Sbjct: 81  WVTTPCYWRSTQPFARAASTMARSWSCAPTCAGARTAWSSPA 122

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>NOP4_YEAST (P37838) Nucleolar protein NOP4 (Nucleolar protein NOP77)|
          Length = 685

 Score = 29.6 bits (65), Expect = 7.7
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = +3

Query: 315 LRGLPYSATIEDIIKFFVEYELTEDNVHIAYRSDGKATGEAFVEF 449
           +R +PY AT E +   F ++   +  + +  +S G A G AFV F
Sbjct: 294 VRNVPYDATEESLAPHFSKFGSVKYALPVIDKSTGLAKGTAFVAF 338

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>MILK2_HUMAN (Q8IY33) MICAL-like protein 2|
          Length = 904

 Score = 29.6 bits (65), Expect = 7.7
 Identities = 24/93 (25%), Positives = 36/93 (38%), Gaps = 1/93 (1%)
 Frame = -3

Query: 423 PSHPSGTRCAHCPPSART-PQRT**CPLWWRSKGAHAASAPQCTPCCSCLQTASWAVEEA 247
           P+ PS +R A  P   +  P+ T   P+ W       +SA  CT   +       +  + 
Sbjct: 319 PARPSESRLAPTPTEGKVRPRVTNSSPMGW-------SSAAPCTAAAASHPAVPPSAPDP 371

Query: 246 RSAGAQARGEHHPGSPQRLLRCSIPASCI*KPP 148
           R A  Q  G     +PQ  L  S  ++    PP
Sbjct: 372 RPATPQGGGAPRVAAPQTTLSSSSTSAATVDPP 404


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 90,889,387
Number of Sequences: 219361
Number of extensions: 1927865
Number of successful extensions: 7752
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 7122
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7715
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5824436538
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result