| Clone Name | bags12f10 |
|---|---|
| Clone Library Name | barley_pub |
>IDHP_MEDSA (Q40345) Isocitrate dehydrogenase [NADP], chloroplast precursor (EC| 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) (Fragment) Length = 433 Score = 243 bits (620), Expect = 2e-64 Identities = 114/138 (82%), Positives = 129/138 (93%), Gaps = 2/138 (1%) Frame = +2 Query: 68 RXKLIFPFLDLDIKYFDLGVLHRDATDDKVTVEAAEATLKYNVAIKCATITPDEDRVKEF 247 + KLIFPF++LDIKYFDLG+ +RD T+DKVTVE+AEATLKYNVAIKCATITPDE RVKEF Sbjct: 50 KDKLIFPFVELDIKYFDLGLPYRDETNDKVTVESAEATLKYNVAIKCATITPDEARVKEF 109 Query: 248 NLKQMWRSPNGTIRNIINGTVFREPIICKNVPKLVPGWTKPICIGRHAFGDQYRATDAVL 427 LK MWRSPNGTIRNI+NGTVFREPIICKN+P+L+PGWTKPICIGRHAFGDQYRATD+V+ Sbjct: 110 GLKSMWRSPNGTIRNILNGTVFREPIICKNIPRLIPGWTKPICIGRHAFGDQYRATDSVI 169 Query: 428 KGPGKLRLVF--EGKDET 475 KGPGKL+LVF EG+ ET Sbjct: 170 KGPGKLKLVFVPEGQGET 187 Score = 33.5 bits (75), Expect = 0.29 Identities = 16/37 (43%), Positives = 20/37 (54%) Frame = +1 Query: 13 PSSXMDGDEMTRVFWQSIKXQAYLPIFGLGHQIL*LG 123 P MDGDEMTR+ W+ IK + P L + LG Sbjct: 32 PIVEMDGDEMTRIIWKYIKDKLIFPFVELDIKYFDLG 68
>IDHC_SOLTU (P50217) Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 416 Score = 242 bits (617), Expect = 4e-64 Identities = 115/137 (83%), Positives = 125/137 (91%), Gaps = 2/137 (1%) Frame = +2 Query: 68 RXKLIFPFLDLDIKYFDLGVLHRDATDDKVTVEAAEATLKYNVAIKCATITPDEDRVKEF 247 + KLI PFL+LDIKYF LG+ HRDATDDKVTVE+AEAT KYNVAIKCATITPDE RVKEF Sbjct: 29 KDKLILPFLELDIKYFSLGLPHRDATDDKVTVESAEATQKYNVAIKCATITPDEARVKEF 88 Query: 248 NLKQMWRSPNGTIRNIINGTVFREPIICKNVPKLVPGWTKPICIGRHAFGDQYRATDAVL 427 NLK MWRSPNGTIRNI+NGTVFREPI+CKN+P+LVPGWTKPICIGRHAFGDQYRATD V+ Sbjct: 89 NLKSMWRSPNGTIRNILNGTVFREPIMCKNIPRLVPGWTKPICIGRHAFGDQYRATDTVI 148 Query: 428 KGPGKLRLVF--EGKDE 472 KG GKL+LVF EG DE Sbjct: 149 KGAGKLKLVFVPEGSDE 165 Score = 38.1 bits (87), Expect = 0.012 Identities = 19/37 (51%), Positives = 22/37 (59%) Frame = +1 Query: 13 PSSXMDGDEMTRVFWQSIKXQAYLPIFGLGHQIL*LG 123 P MDGDEMTRV W+SIK + LP L + LG Sbjct: 11 PIVEMDGDEMTRVIWKSIKDKLILPFLELDIKYFSLG 47
>IDHC_TOBAC (P50218) Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 415 Score = 241 bits (616), Expect = 5e-64 Identities = 115/137 (83%), Positives = 126/137 (91%), Gaps = 2/137 (1%) Frame = +2 Query: 68 RXKLIFPFLDLDIKYFDLGVLHRDATDDKVTVEAAEATLKYNVAIKCATITPDEDRVKEF 247 + KLI PFL+LDIKYFDLG+ HRDATDDKVTVE+AEAT KYNVAIKCATITPDE RVKEF Sbjct: 29 KDKLICPFLELDIKYFDLGLPHRDATDDKVTVESAEATQKYNVAIKCATITPDEARVKEF 88 Query: 248 NLKQMWRSPNGTIRNIINGTVFREPIICKNVPKLVPGWTKPICIGRHAFGDQYRATDAVL 427 NLK MWRSPNGTIRNI+NGTVFREPI+CKN+P+LVPGWTKPICIGRHAFGDQYRATD V+ Sbjct: 89 NLKSMWRSPNGTIRNILNGTVFREPIMCKNIPRLVPGWTKPICIGRHAFGDQYRATDTVI 148 Query: 428 KGPGKLRLVF--EGKDE 472 +G GKL+LVF EG DE Sbjct: 149 QGAGKLKLVFVPEGTDE 165 Score = 36.2 bits (82), Expect = 0.045 Identities = 18/37 (48%), Positives = 21/37 (56%) Frame = +1 Query: 13 PSSXMDGDEMTRVFWQSIKXQAYLPIFGLGHQIL*LG 123 P MDGDEMTRV W+SIK + P L + LG Sbjct: 11 PIVEMDGDEMTRVIWKSIKDKLICPFLELDIKYFDLG 47
>IDHC_SOYBN (Q06197) Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 413 Score = 232 bits (592), Expect = 3e-61 Identities = 109/137 (79%), Positives = 124/137 (90%), Gaps = 2/137 (1%) Frame = +2 Query: 68 RXKLIFPFLDLDIKYFDLGVLHRDATDDKVTVEAAEATLKYNVAIKCATITPDEDRVKEF 247 + KLI PFL+LDIKY+DLG+ +RD TDDKVT+E+AEATLKYNVAIKCATITPDE RVKEF Sbjct: 30 KDKLILPFLELDIKYYDLGLPYRDETDDKVTIESAEATLKYNVAIKCATITPDEARVKEF 89 Query: 248 NLKQMWRSPNGTIRNIINGTVFREPIICKNVPKLVPGWTKPICIGRHAFGDQYRATDAVL 427 LK MW+SPNGTIRNI+NGTVFREPI+CKN+P+LVPGWTK ICIGRHAFGDQYRATD V+ Sbjct: 90 GLKSMWKSPNGTIRNILNGTVFREPILCKNIPRLVPGWTKAICIGRHAFGDQYRATDTVI 149 Query: 428 KGPGKLRLVF--EGKDE 472 KG GKL+LVF EG+ E Sbjct: 150 KGAGKLKLVFVPEGQGE 166 Score = 37.7 bits (86), Expect = 0.015 Identities = 19/37 (51%), Positives = 22/37 (59%) Frame = +1 Query: 13 PSSXMDGDEMTRVFWQSIKXQAYLPIFGLGHQIL*LG 123 P MDGDEMTRV W+SIK + LP L + LG Sbjct: 12 PIVEMDGDEMTRVIWKSIKDKLILPFLELDIKYYDLG 48
>IDHP_ASPNG (P79089) Isocitrate dehydrogenase [NADP], mitochondrial precursor| (EC 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 498 Score = 206 bits (525), Expect(2) = 5e-57 Identities = 99/140 (70%), Positives = 115/140 (82%), Gaps = 3/140 (2%) Frame = +2 Query: 68 RXKLIFPFLDLDIKYFDLGVLHRDATDDKVTVEAAEATLKYNVAIKCATITPDEDRVKEF 247 R KLI P+LD+D+KY+DLG+ +RD TDD+VTVEAAEA KY V +KCATITPDE RV+EF Sbjct: 116 REKLILPYLDVDLKYYDLGLEYRDQTDDQVTVEAAEAIKKYGVGVKCATITPDEARVEEF 175 Query: 248 NLKQMWRSPNGTIRNIINGTVFREPIICKNVPKLVPGWTKPICIGRHAFGDQYRATDAVL 427 LK+MW SPNGTIRNI+ GTVFREPII +P+LVPGW KPI IGRHAFGDQYRATD V+ Sbjct: 176 KLKKMWLSPNGTIRNILGGTVFREPIIIPAIPRLVPGWNKPIIIGRHAFGDQYRATDRVI 235 Query: 428 KGPGKLRLVF---EGKDETV 478 GPGKL LV+ G+ ETV Sbjct: 236 PGPGKLELVYTPVNGEPETV 255 Score = 33.9 bits (76), Expect(2) = 5e-57 Identities = 13/25 (52%), Positives = 17/25 (68%) Frame = +1 Query: 13 PSSXMDGDEMTRVFWQSIKXQAYLP 87 P +DGDEMTR+ WQ I+ + LP Sbjct: 98 PVVELDGDEMTRIIWQEIREKLILP 122
>IDHP_HUMAN (P48735) Isocitrate dehydrogenase [NADP], mitochondrial precursor| (EC 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) (ICD-M) Length = 452 Score = 199 bits (506), Expect(2) = 2e-55 Identities = 91/134 (67%), Positives = 112/134 (83%) Frame = +2 Query: 68 RXKLIFPFLDLDIKYFDLGVLHRDATDDKVTVEAAEATLKYNVAIKCATITPDEDRVKEF 247 + KLI P +D+ +KYFDLG+ +RD TDD+VT+++A AT KY+VA+KCATITPDE RV+EF Sbjct: 67 KEKLILPHVDIQLKYFDLGLPNRDQTDDQVTIDSALATQKYSVAVKCATITPDEARVEEF 126 Query: 248 NLKQMWRSPNGTIRNIINGTVFREPIICKNVPKLVPGWTKPICIGRHAFGDQYRATDAVL 427 LK+MW+SPNGTIRNI+ GTVFREPIICKN+P+LVPGWTKPI IGRHA GDQY+ATD V Sbjct: 127 KLKKMWKSPNGTIRNILGGTVFREPIICKNIPRLVPGWTKPITIGRHAHGDQYKATDFVA 186 Query: 428 KGPGKLRLVFEGKD 469 G ++VF KD Sbjct: 187 DRAGTFKMVFTPKD 200 Score = 35.4 bits (80), Expect(2) = 2e-55 Identities = 15/25 (60%), Positives = 17/25 (68%) Frame = +1 Query: 13 PSSXMDGDEMTRVFWQSIKXQAYLP 87 P MDGDEMTR+ WQ IK + LP Sbjct: 49 PVVEMDGDEMTRIIWQFIKEKLILP 73
>IDHP_PIG (P33198) Isocitrate dehydrogenase [NADP], mitochondrial precursor| (EC 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) (ICD-M) (Fragment) Length = 421 Score = 197 bits (502), Expect(2) = 7e-55 Identities = 90/134 (67%), Positives = 113/134 (84%) Frame = +2 Query: 68 RXKLIFPFLDLDIKYFDLGVLHRDATDDKVTVEAAEATLKYNVAIKCATITPDEDRVKEF 247 + KLI P +D+ +KYFDLG+ +RD T+D+VT+++A AT KY+VA+KCATITPDE RV+EF Sbjct: 36 KEKLILPHVDVQLKYFDLGLPNRDQTNDQVTIDSALATQKYSVAVKCATITPDEARVEEF 95 Query: 248 NLKQMWRSPNGTIRNIINGTVFREPIICKNVPKLVPGWTKPICIGRHAFGDQYRATDAVL 427 LK+MW+SPNGTIRNI+ GTVFREPIICKN+P+LVPGWTKPI IGRHA GDQY+ATD V+ Sbjct: 96 KLKKMWKSPNGTIRNILGGTVFREPIICKNIPRLVPGWTKPITIGRHAHGDQYKATDFVV 155 Query: 428 KGPGKLRLVFEGKD 469 G ++VF KD Sbjct: 156 DRAGTFKIVFTPKD 169 Score = 35.4 bits (80), Expect(2) = 7e-55 Identities = 15/25 (60%), Positives = 17/25 (68%) Frame = +1 Query: 13 PSSXMDGDEMTRVFWQSIKXQAYLP 87 P MDGDEMTR+ WQ IK + LP Sbjct: 18 PVVEMDGDEMTRIIWQFIKEKLILP 42
>IDHP_BOVIN (Q04467) Isocitrate dehydrogenase [NADP], mitochondrial precursor| (EC 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) (ICD-M) Length = 452 Score = 197 bits (501), Expect(2) = 9e-55 Identities = 90/134 (67%), Positives = 113/134 (84%) Frame = +2 Query: 68 RXKLIFPFLDLDIKYFDLGVLHRDATDDKVTVEAAEATLKYNVAIKCATITPDEDRVKEF 247 + KLI P +D+ +KYFDLG+ +RD T+D+VT+++A AT KY+VA+KCATITPDE RV+EF Sbjct: 67 KEKLILPHVDVQLKYFDLGLPNRDQTNDQVTIDSALATQKYSVAVKCATITPDEARVEEF 126 Query: 248 NLKQMWRSPNGTIRNIINGTVFREPIICKNVPKLVPGWTKPICIGRHAFGDQYRATDAVL 427 LK+MW+SPNGTIRNI+ GTVFREPIICKN+P+LVPGWTKPI IGRHA GDQY+ATD V+ Sbjct: 127 KLKKMWKSPNGTIRNILGGTVFREPIICKNIPRLVPGWTKPITIGRHAHGDQYKATDFVV 186 Query: 428 KGPGKLRLVFEGKD 469 G ++VF KD Sbjct: 187 DRAGTFKVVFTPKD 200 Score = 35.4 bits (80), Expect(2) = 9e-55 Identities = 15/25 (60%), Positives = 17/25 (68%) Frame = +1 Query: 13 PSSXMDGDEMTRVFWQSIKXQAYLP 87 P MDGDEMTR+ WQ IK + LP Sbjct: 49 PVVEMDGDEMTRIIWQFIKEKLILP 73
>IDHC_MOUSE (O88844) Isocitrate dehydrogenase [NADP] cytoplasmic (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 414 Score = 201 bits (511), Expect(2) = 1e-54 Identities = 92/138 (66%), Positives = 114/138 (82%) Frame = +2 Query: 62 LSRXKLIFPFLDLDIKYFDLGVLHRDATDDKVTVEAAEATLKYNVAIKCATITPDEDRVK 241 L + KLI P+++LD+ +DLG+ +RDAT+D+VT +AAEA KYNV +KCATITPDE RV+ Sbjct: 25 LIKEKLILPYVELDLHSYDLGIENRDATNDQVTKDAAEAIKKYNVGVKCATITPDEKRVE 84 Query: 242 EFNLKQMWRSPNGTIRNIINGTVFREPIICKNVPKLVPGWTKPICIGRHAFGDQYRATDA 421 EF LKQMW+SPNGTIRNI+ GTVFRE IICKN+P+LV GW KPI IGRHA+GDQYRATD Sbjct: 85 EFKLKQMWKSPNGTIRNILGGTVFREAIICKNIPRLVTGWVKPIIIGRHAYGDQYRATDF 144 Query: 422 VLKGPGKLRLVFEGKDET 475 V+ GPGK+ + + KD T Sbjct: 145 VVPGPGKVEITYTPKDGT 162 Score = 31.2 bits (69), Expect(2) = 1e-54 Identities = 12/21 (57%), Positives = 15/21 (71%) Frame = +1 Query: 25 MDGDEMTRVFWQSIKXQAYLP 87 M GDEMTR+ W+ IK + LP Sbjct: 13 MQGDEMTRIIWELIKEKLILP 33
>IDHC_MICME (Q9Z2K9) Isocitrate dehydrogenase [NADP] cytoplasmic (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 414 Score = 201 bits (511), Expect(2) = 1e-54 Identities = 92/136 (67%), Positives = 113/136 (83%) Frame = +2 Query: 62 LSRXKLIFPFLDLDIKYFDLGVLHRDATDDKVTVEAAEATLKYNVAIKCATITPDEDRVK 241 L + KLI P+++LD+ +DLG+ +RDAT+D+VT +AAEA KYNV +KCATITPDE RV+ Sbjct: 25 LIKEKLILPYVELDLHSYDLGIENRDATNDQVTKDAAEAIKKYNVGVKCATITPDEKRVE 84 Query: 242 EFNLKQMWRSPNGTIRNIINGTVFREPIICKNVPKLVPGWTKPICIGRHAFGDQYRATDA 421 EF LKQMW+SPNGTIRNI+ GTVFRE IICKN+P+LV GW KPI IGRHA+GDQYRATD Sbjct: 85 EFKLKQMWKSPNGTIRNILGGTVFREAIICKNIPRLVTGWVKPIIIGRHAYGDQYRATDF 144 Query: 422 VLKGPGKLRLVFEGKD 469 V+ GPGK+ + F KD Sbjct: 145 VVPGPGKVEITFTPKD 160 Score = 31.2 bits (69), Expect(2) = 1e-54 Identities = 12/21 (57%), Positives = 15/21 (71%) Frame = +1 Query: 25 MDGDEMTRVFWQSIKXQAYLP 87 M GDEMTR+ W+ IK + LP Sbjct: 13 MQGDEMTRIIWELIKEKLILP 33
>IDHC_RAT (P41562) Isocitrate dehydrogenase [NADP] cytoplasmic (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 414 Score = 200 bits (508), Expect(2) = 3e-54 Identities = 91/136 (66%), Positives = 113/136 (83%) Frame = +2 Query: 62 LSRXKLIFPFLDLDIKYFDLGVLHRDATDDKVTVEAAEATLKYNVAIKCATITPDEDRVK 241 L + KLI P+++LD+ +DLG+ +RDAT+D+VT +AAEA KYNV +KCATITPDE RV+ Sbjct: 25 LIKEKLILPYVELDLHSYDLGIENRDATNDQVTKDAAEAIKKYNVGVKCATITPDEKRVE 84 Query: 242 EFNLKQMWRSPNGTIRNIINGTVFREPIICKNVPKLVPGWTKPICIGRHAFGDQYRATDA 421 EF LKQMW+SPNGTIRNI+ GTVFRE IICKN+P+LV GW KPI IGRHA+GDQYRATD Sbjct: 85 EFKLKQMWKSPNGTIRNILGGTVFREAIICKNIPRLVTGWVKPIIIGRHAYGDQYRATDF 144 Query: 422 VLKGPGKLRLVFEGKD 469 V+ GPGK+ + + KD Sbjct: 145 VVPGPGKVEITYTPKD 160 Score = 31.2 bits (69), Expect(2) = 3e-54 Identities = 12/21 (57%), Positives = 15/21 (71%) Frame = +1 Query: 25 MDGDEMTRVFWQSIKXQAYLP 87 M GDEMTR+ W+ IK + LP Sbjct: 13 MQGDEMTRIIWELIKEKLILP 33
>IDHC_MICOH (Q9Z2K8) Isocitrate dehydrogenase [NADP] cytoplasmic (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 414 Score = 200 bits (508), Expect(2) = 3e-54 Identities = 91/136 (66%), Positives = 113/136 (83%) Frame = +2 Query: 62 LSRXKLIFPFLDLDIKYFDLGVLHRDATDDKVTVEAAEATLKYNVAIKCATITPDEDRVK 241 L + KLI P+++LD+ +DLG+ +RDAT+D+VT +AAEA KYNV +KCATITPDE RV+ Sbjct: 25 LIKEKLILPYVELDLHSYDLGIENRDATNDQVTKDAAEAIKKYNVGVKCATITPDEKRVE 84 Query: 242 EFNLKQMWRSPNGTIRNIINGTVFREPIICKNVPKLVPGWTKPICIGRHAFGDQYRATDA 421 EF LKQMW+SPNGTIRNI+ GTVFRE IICKN+P+LV GW KPI IGRHA+GDQYRATD Sbjct: 85 EFKLKQMWKSPNGTIRNILGGTVFREAIICKNIPRLVTGWVKPIIIGRHAYGDQYRATDF 144 Query: 422 VLKGPGKLRLVFEGKD 469 V+ GPGK+ + + KD Sbjct: 145 VVPGPGKVEITYTPKD 160 Score = 31.2 bits (69), Expect(2) = 3e-54 Identities = 12/21 (57%), Positives = 15/21 (71%) Frame = +1 Query: 25 MDGDEMTRVFWQSIKXQAYLP 87 M GDEMTR+ W+ IK + LP Sbjct: 13 MQGDEMTRIIWELIKEKLILP 33
>IDHC_HUMAN (O75874) Isocitrate dehydrogenase [NADP] cytoplasmic (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 414 Score = 199 bits (507), Expect(2) = 1e-53 Identities = 91/138 (65%), Positives = 114/138 (82%) Frame = +2 Query: 62 LSRXKLIFPFLDLDIKYFDLGVLHRDATDDKVTVEAAEATLKYNVAIKCATITPDEDRVK 241 L + KLIFP+++LD+ +DLG+ +RDAT+D+VT +AAEA K+NV +KCATITPDE RV+ Sbjct: 25 LIKEKLIFPYVELDLHSYDLGIENRDATNDQVTKDAAEAIKKHNVGVKCATITPDEKRVE 84 Query: 242 EFNLKQMWRSPNGTIRNIINGTVFREPIICKNVPKLVPGWTKPICIGRHAFGDQYRATDA 421 EF LKQMW+SPNGTIRNI+ GTVFRE IICKN+P+LV GW KPI IGRHA+GDQYRATD Sbjct: 85 EFKLKQMWKSPNGTIRNILGGTVFREAIICKNIPRLVSGWVKPIIIGRHAYGDQYRATDF 144 Query: 422 VLKGPGKLRLVFEGKDET 475 V+ GPGK+ + + D T Sbjct: 145 VVPGPGKVEITYTPSDGT 162 Score = 29.6 bits (65), Expect(2) = 1e-53 Identities = 11/21 (52%), Positives = 14/21 (66%) Frame = +1 Query: 25 MDGDEMTRVFWQSIKXQAYLP 87 M GDEMTR+ W+ IK + P Sbjct: 13 MQGDEMTRIIWELIKEKLIFP 33
>IDHC_YEAST (P41939) Isocitrate dehydrogenase [NADP] cytoplasmic (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 412 Score = 198 bits (504), Expect(2) = 1e-53 Identities = 91/138 (65%), Positives = 115/138 (83%) Frame = +2 Query: 62 LSRXKLIFPFLDLDIKYFDLGVLHRDATDDKVTVEAAEATLKYNVAIKCATITPDEDRVK 241 L R KL+ P+LD+D+KY+DL V +RD T+D+VTV++A ATLKY VA+KCATITPDE RV+ Sbjct: 25 LIRDKLVLPYLDVDLKYYDLSVEYRDQTNDQVTVDSATATLKYGVAVKCATITPDEARVE 84 Query: 242 EFNLKQMWRSPNGTIRNIINGTVFREPIICKNVPKLVPGWTKPICIGRHAFGDQYRATDA 421 EF+LK+MW+SPNGTIRNI+ GTVFREPII +P+LVP W KPI IGRHAFGDQY+ATD Sbjct: 85 EFHLKKMWKSPNGTIRNILGGTVFREPIIIPRIPRLVPQWEKPIIIGRHAFGDQYKATDV 144 Query: 422 VLKGPGKLRLVFEGKDET 475 ++ G+LRLV++ K T Sbjct: 145 IVPEEGELRLVYKSKSGT 162 Score = 30.4 bits (67), Expect(2) = 1e-53 Identities = 12/25 (48%), Positives = 15/25 (60%) Frame = +1 Query: 13 PSSXMDGDEMTRVFWQSIKXQAYLP 87 P MDGDE TR+ W I+ + LP Sbjct: 9 PIVEMDGDEQTRIIWHLIRDKLVLP 33
>IDHP_YEAST (P21954) Isocitrate dehydrogenase [NADP], mitochondrial precursor| (EC 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 428 Score = 195 bits (496), Expect(2) = 2e-53 Identities = 90/136 (66%), Positives = 108/136 (79%) Frame = +2 Query: 68 RXKLIFPFLDLDIKYFDLGVLHRDATDDKVTVEAAEATLKYNVAIKCATITPDEDRVKEF 247 + KLI P+LD+D+KY+DL V RDAT DK+T +AAEA KY V IKCATITPDE RVKEF Sbjct: 43 KKKLILPYLDVDLKYYDLSVESRDATSDKITQDAAEAIKKYGVGIKCATITPDEARVKEF 102 Query: 248 NLKQMWRSPNGTIRNIINGTVFREPIICKNVPKLVPGWTKPICIGRHAFGDQYRATDAVL 427 NL +MW+SPNGTIRNI+ GTVFREPI+ +P+LVP W KPI IGRHA GDQY+ATD ++ Sbjct: 103 NLHKMWKSPNGTIRNILGGTVFREPIVIPRIPRLVPRWEKPIIIGRHAHGDQYKATDTLI 162 Query: 428 KGPGKLRLVFEGKDET 475 GPG L LV++ D T Sbjct: 163 PGPGSLELVYKPSDPT 178 Score = 33.1 bits (74), Expect(2) = 2e-53 Identities = 13/25 (52%), Positives = 16/25 (64%) Frame = +1 Query: 13 PSSXMDGDEMTRVFWQSIKXQAYLP 87 P +DGDEMTR+ W IK + LP Sbjct: 25 PVVELDGDEMTRIIWDKIKKKLILP 49
>IDHH_YEAST (P53982) Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 420 Score = 196 bits (498), Expect(2) = 2e-53 Identities = 91/136 (66%), Positives = 110/136 (80%) Frame = +2 Query: 62 LSRXKLIFPFLDLDIKYFDLGVLHRDATDDKVTVEAAEATLKYNVAIKCATITPDEDRVK 241 L + KLI P+LD+D+KY+DL + RD T+D+VT +++ ATLKY VA+KCATITPDE R+K Sbjct: 25 LIKEKLILPYLDVDLKYYDLSIQERDRTNDQVTKDSSYATLKYGVAVKCATITPDEARMK 84 Query: 242 EFNLKQMWRSPNGTIRNIINGTVFREPIICKNVPKLVPGWTKPICIGRHAFGDQYRATDA 421 EFNLK+MW+SPNGTIRNI+ GTVFREPII +P+LVP W KPI IGRHAFGDQYRATD Sbjct: 85 EFNLKEMWKSPNGTIRNILGGTVFREPIIIPKIPRLVPHWEKPIIIGRHAFGDQYRATDI 144 Query: 422 VLKGPGKLRLVFEGKD 469 +K GKLRL F D Sbjct: 145 KIKKAGKLRLQFSSDD 160 Score = 32.3 bits (72), Expect(2) = 2e-53 Identities = 14/25 (56%), Positives = 16/25 (64%) Frame = +1 Query: 13 PSSXMDGDEMTRVFWQSIKXQAYLP 87 P MDGDE TRV W+ IK + LP Sbjct: 9 PIVEMDGDEQTRVIWKLIKEKLILP 33
>IDHP_MOUSE (P54071) Isocitrate dehydrogenase [NADP], mitochondrial precursor| (EC 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) (ICD-M) Length = 523 Score = 191 bits (485), Expect(2) = 6e-53 Identities = 87/134 (64%), Positives = 111/134 (82%) Frame = +2 Query: 68 RXKLIFPFLDLDIKYFDLGVLHRDATDDKVTVEAAEATLKYNVAIKCATITPDEDRVKEF 247 + KLI P +D+ +KYFDLG+ +RD T+D+VT+++A A KY++A+KCATITPDE RV+EF Sbjct: 139 KEKLILPHVDVQLKYFDLGLPNRDQTNDQVTIDSALAAQKYSMAVKCATITPDEARVEEF 198 Query: 248 NLKQMWRSPNGTIRNIINGTVFREPIICKNVPKLVPGWTKPICIGRHAFGDQYRATDAVL 427 LK+MW+SPNGTIRNI+ GTVFREP ICKN+P+LVPGWTKPI IGRHA GDQY+ATD V+ Sbjct: 199 KLKKMWKSPNGTIRNILGGTVFREPSICKNIPRLVPGWTKPITIGRHAHGDQYKATDFVV 258 Query: 428 KGPGKLRLVFEGKD 469 G +LVF K+ Sbjct: 259 DRAGTFKLVFTPKN 272 Score = 35.4 bits (80), Expect(2) = 6e-53 Identities = 15/25 (60%), Positives = 17/25 (68%) Frame = +1 Query: 13 PSSXMDGDEMTRVFWQSIKXQAYLP 87 P MDGDEMTR+ WQ IK + LP Sbjct: 121 PVVEMDGDEMTRIIWQFIKEKLILP 145
>IDH1_CANTR (O13285) Isocitrate dehydrogenase [NADP], mitochondrial precursor| (EC 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) (CtIDP1) Length = 430 Score = 189 bits (479), Expect(2) = 1e-52 Identities = 85/130 (65%), Positives = 107/130 (82%) Frame = +2 Query: 68 RXKLIFPFLDLDIKYFDLGVLHRDATDDKVTVEAAEATLKYNVAIKCATITPDEDRVKEF 247 + +LI P+LD+D+KY+DLG+ RDATDD++T++AA A +Y V +KCATITPDE RVKEF Sbjct: 53 KDQLILPYLDVDLKYYDLGIESRDATDDQITIDAANAIKEYGVGVKCATITPDEARVKEF 112 Query: 248 NLKQMWRSPNGTIRNIINGTVFREPIICKNVPKLVPGWTKPICIGRHAFGDQYRATDAVL 427 +LK+MW SPNGTIRNI+ GTVFRE II +P+L+PGW KPI IGRHAFGDQY+ATD V+ Sbjct: 113 HLKKMWLSPNGTIRNILGGTVFRESIIIPCIPRLIPGWEKPIVIGRHAFGDQYKATDLVI 172 Query: 428 KGPGKLRLVF 457 PG+L L F Sbjct: 173 NEPGRLELRF 182 Score = 36.6 bits (83), Expect(2) = 1e-52 Identities = 15/25 (60%), Positives = 17/25 (68%) Frame = +1 Query: 13 PSSXMDGDEMTRVFWQSIKXQAYLP 87 P +DGDEMTR+ WQ IK Q LP Sbjct: 35 PIVELDGDEMTRIIWQKIKDQLILP 59
>IDHP_SCHPO (O14254) Probable isocitrate dehydrogenase [NADP], mitochondrial| precursor (EC 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 418 Score = 202 bits (515), Expect = 3e-52 Identities = 90/133 (67%), Positives = 112/133 (84%) Frame = +2 Query: 68 RXKLIFPFLDLDIKYFDLGVLHRDATDDKVTVEAAEATLKYNVAIKCATITPDEDRVKEF 247 R KL+ P++D+ + Y+DLG+ RD T+D++TV+AA+A LK +V IKCATITPDE RVKE+ Sbjct: 37 REKLVLPYMDIKLDYYDLGIEARDKTNDQITVDAAKAILKNDVGIKCATITPDEARVKEY 96 Query: 248 NLKQMWRSPNGTIRNIINGTVFREPIICKNVPKLVPGWTKPICIGRHAFGDQYRATDAVL 427 NLK+MW+SPNGTIRNI+NGTVFREPI+ KN+PK +PGWT PICIGRHAFGDQY++TD V Sbjct: 97 NLKKMWKSPNGTIRNILNGTVFREPILIKNIPKYIPGWTNPICIGRHAFGDQYKSTDLVA 156 Query: 428 KGPGKLRLVFEGK 466 GPGKL L F K Sbjct: 157 SGPGKLELSFTPK 169 Score = 33.5 bits (75), Expect = 0.29 Identities = 17/40 (42%), Positives = 21/40 (52%) Frame = +1 Query: 13 PSSXMDGDEMTRVFWQSIKXQAYLPIFGLGHQIL*LGSSA 132 P MDGDEMTRV W+ I+ + LP + LG A Sbjct: 19 PVVEMDGDEMTRVIWKIIREKLVLPYMDIKLDYYDLGIEA 58
>IDH_MYCTU (P65097) Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 409 Score = 191 bits (485), Expect(2) = 4e-52 Identities = 88/136 (64%), Positives = 108/136 (79%) Frame = +2 Query: 62 LSRXKLIFPFLDLDIKYFDLGVLHRDATDDKVTVEAAEATLKYNVAIKCATITPDEDRVK 241 L + LI P+LD+ + Y+DLG+ HRDATDD+VT++AA A K+ V +KCATITPDE RV+ Sbjct: 28 LIKDMLILPYLDIRLDYYDLGIEHRDATDDQVTIDAAYAIKKHGVGVKCATITPDEARVE 87 Query: 242 EFNLKQMWRSPNGTIRNIINGTVFREPIICKNVPKLVPGWTKPICIGRHAFGDQYRATDA 421 EFNLK+MW SPNGTIRNI+ GT+FREPI+ NVP+LVPGWTKPI IGRHAFGDQYRAT+ Sbjct: 88 EFNLKKMWLSPNGTIRNILGGTIFREPIVISNVPRLVPGWTKPIVIGRHAFGDQYRATNF 147 Query: 422 VLKGPGKLRLVFEGKD 469 + PG + L F D Sbjct: 148 KVDQPGTVTLTFTPAD 163 Score = 32.7 bits (73), Expect(2) = 4e-52 Identities = 14/25 (56%), Positives = 16/25 (64%) Frame = +1 Query: 13 PSSXMDGDEMTRVFWQSIKXQAYLP 87 P +DGDEMTRV W+ IK LP Sbjct: 12 PVVELDGDEMTRVIWKLIKDMLILP 36
>IDH_MYCBO (P65098) Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 409 Score = 191 bits (485), Expect(2) = 4e-52 Identities = 88/136 (64%), Positives = 108/136 (79%) Frame = +2 Query: 62 LSRXKLIFPFLDLDIKYFDLGVLHRDATDDKVTVEAAEATLKYNVAIKCATITPDEDRVK 241 L + LI P+LD+ + Y+DLG+ HRDATDD+VT++AA A K+ V +KCATITPDE RV+ Sbjct: 28 LIKDMLILPYLDIRLDYYDLGIEHRDATDDQVTIDAAYAIKKHGVGVKCATITPDEARVE 87 Query: 242 EFNLKQMWRSPNGTIRNIINGTVFREPIICKNVPKLVPGWTKPICIGRHAFGDQYRATDA 421 EFNLK+MW SPNGTIRNI+ GT+FREPI+ NVP+LVPGWTKPI IGRHAFGDQYRAT+ Sbjct: 88 EFNLKKMWLSPNGTIRNILGGTIFREPIVISNVPRLVPGWTKPIVIGRHAFGDQYRATNF 147 Query: 422 VLKGPGKLRLVFEGKD 469 + PG + L F D Sbjct: 148 KVDQPGTVTLTFTPAD 163 Score = 32.7 bits (73), Expect(2) = 4e-52 Identities = 14/25 (56%), Positives = 16/25 (64%) Frame = +1 Query: 13 PSSXMDGDEMTRVFWQSIKXQAYLP 87 P +DGDEMTRV W+ IK LP Sbjct: 12 PVVELDGDEMTRVIWKLIKDMLILP 36
>IDH2_CANTR (O13294) Isocitrate dehydrogenase [NADP] peroxisomal (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (PS-NADP-IDH) (CtIDP2) Length = 410 Score = 201 bits (512), Expect = 6e-52 Identities = 90/134 (67%), Positives = 112/134 (83%) Frame = +2 Query: 68 RXKLIFPFLDLDIKYFDLGVLHRDATDDKVTVEAAEATLKYNVAIKCATITPDEDRVKEF 247 + KLI P+L++D+KY+DLG+ +RD TDDKVT +AAEA L+Y V +KCATITPDE RVKEF Sbjct: 29 KDKLILPYLNVDLKYYDLGIEYRDKTDDKVTTDAAEAILQYGVGVKCATITPDEARVKEF 88 Query: 248 NLKQMWRSPNGTIRNIINGTVFREPIICKNVPKLVPGWTKPICIGRHAFGDQYRATDAVL 427 NLK+MW SPNGT+RN+I GTVFREPI+ N+P++VP W KPI IGRHAFGDQY+ATD V+ Sbjct: 89 NLKKMWLSPNGTLRNVIGGTVFREPIVIDNIPRIVPSWEKPIIIGRHAFGDQYKATDVVI 148 Query: 428 KGPGKLRLVFEGKD 469 G L+LVF+ KD Sbjct: 149 PAAGDLKLVFKPKD 162 Score = 35.8 bits (81), Expect = 0.059 Identities = 17/37 (45%), Positives = 21/37 (56%) Frame = +1 Query: 13 PSSXMDGDEMTRVFWQSIKXQAYLPIFGLGHQIL*LG 123 P MDGDEMTR+ WQ IK + LP + + LG Sbjct: 11 PIVEMDGDEMTRIIWQFIKDKLILPYLNVDLKYYDLG 47
>IDH_SPHYA (P50215) Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 406 Score = 185 bits (469), Expect(2) = 8e-50 Identities = 83/132 (62%), Positives = 105/132 (79%) Frame = +2 Query: 68 RXKLIFPFLDLDIKYFDLGVLHRDATDDKVTVEAAEATLKYNVAIKCATITPDEDRVKEF 247 R +LI P+LD+D+KY+DL V RD T D++T++AA A +Y V +KCATITPDE RV+EF Sbjct: 27 RERLILPYLDVDLKYYDLSVEKRDETSDQITIDAANAIKEYGVGVKCATITPDEARVEEF 86 Query: 248 NLKQMWRSPNGTIRNIINGTVFREPIICKNVPKLVPGWTKPICIGRHAFGDQYRATDAVL 427 LK+MW+SPNGTIRNI+ G VFREPI+ KNVP+LVPGWT PI +GRHAFGDQY+ATD + Sbjct: 87 GLKKMWKSPNGTIRNILGGVVFREPIVIKNVPRLVPGWTDPIVVGRHAFGDQYKATDFKV 146 Query: 428 KGPGKLRLVFEG 463 G G L + + G Sbjct: 147 PGAGTLTMKWVG 158 Score = 31.2 bits (69), Expect(2) = 8e-50 Identities = 12/25 (48%), Positives = 17/25 (68%) Frame = +1 Query: 13 PSSXMDGDEMTRVFWQSIKXQAYLP 87 P +DGDEMTR+ W+ I+ + LP Sbjct: 9 PVVEIDGDEMTRIIWEWIRERLILP 33
>LON1_BACSU (P37945) ATP-dependent protease La 1 (EC 3.4.21.53)| Length = 774 Score = 33.1 bits (74), Expect = 0.38 Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 10/70 (14%) Frame = +2 Query: 125 VLHRDATDDKVTVEAAEATLKYNVAIKCAT---ITPDEDRVKEF-------NLKQMWRSP 274 VLH D DK +V+A E + ++ I AT I+ DE E +KQM + P Sbjct: 24 VLHLDVGRDK-SVQALEQAMMHDHMIFLATQQDISIDEPGEDEIFTVGTYTKIKQMLKLP 82 Query: 275 NGTIRNIING 304 NGTIR ++ G Sbjct: 83 NGTIRVLVEG 92
>KLF1_HUMAN (Q13351) Krueppel-like factor 1 (Erythroid krueppel-like| transcription factor) (EKLF) (Erythroid transcription factor) Length = 362 Score = 32.0 bits (71), Expect = 0.85 Identities = 15/31 (48%), Positives = 18/31 (58%) Frame = +1 Query: 292 HYKRHRVQRANYMQECPKACSRMD*AHLHWK 384 HY++H QR Q CP+A SR D LH K Sbjct: 329 HYRKHTGQRPFRCQLCPRAFSRSDHLALHMK 359
>RPOC2_LACSA (Q56P11) DNA-directed RNA polymerase beta'' chain (EC 2.7.7.6) (PEP)| (Plastid-encoded RNA polymerase beta'' subunit) (RNA polymerase beta'' subunit) Length = 1381 Score = 30.8 bits (68), Expect = 1.9 Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 2/84 (2%) Frame = -1 Query: 358 SWNKLWDILAYNWLSEHGAVYNVPNCA--IWAPPHLF*VELLNPIFIWSNSCTLNSHIVL 185 ++ +++ IL Y L E+G +YN +C+ I P H LN F+ N C S IV Sbjct: 1012 NFKQIFQILKYYLLDENGQIYNPYSCSNIILNPFH------LNWYFLHYNYCEETSPIV- 1064 Query: 184 ESSLCSLHCNLVISCIAVQNSQVK 113 SL C V CIA + +K Sbjct: 1065 --SLGQFLCENV--CIAKKGPHLK 1084
>AT11B_RABIT (Q9N0Z4) Probable phospholipid-transporting ATPase IF (EC 3.6.3.1)| (ATPase class I type 11B) (ATPase IR) (RING-finger-binding protein) (Fragment) Length = 1169 Score = 30.0 bits (66), Expect = 3.2 Identities = 9/24 (37%), Positives = 16/24 (66%) Frame = +3 Query: 51 ILAVYQGTSLSSHFWTWTSNTLTW 122 ++ V +L +HFWTW ++ +TW Sbjct: 1002 VITVTVKMALETHFWTWINHLVTW 1025
>AT11B_HUMAN (Q9Y2G3) Probable phospholipid-transporting ATPase IF (EC 3.6.3.1)| (ATPase class I type 11B) (ATPase IR) Length = 1177 Score = 30.0 bits (66), Expect = 3.2 Identities = 9/24 (37%), Positives = 16/24 (66%) Frame = +3 Query: 51 ILAVYQGTSLSSHFWTWTSNTLTW 122 ++ V +L +HFWTW ++ +TW Sbjct: 1010 VITVTVKMALETHFWTWINHLVTW 1033
>KLF4_MOUSE (Q60793) Krueppel-like factor 4 (Gut-enriched krueppel-like factor)| (Epithelial zinc-finger protein EZF) Length = 474 Score = 29.6 bits (65), Expect = 4.2 Identities = 14/34 (41%), Positives = 18/34 (52%) Frame = +1 Query: 292 HYKRHRVQRANYMQECPKACSRMD*AHLHWKACF 393 HY++H R Q+C +A SR D LH K F Sbjct: 441 HYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRHF 474
>KLF4_HUMAN (O43474) Krueppel-like factor 4 (Epithelial zinc-finger protein| EZF) (Gut-enriched krueppel-like factor) Length = 470 Score = 29.6 bits (65), Expect = 4.2 Identities = 14/34 (41%), Positives = 18/34 (52%) Frame = +1 Query: 292 HYKRHRVQRANYMQECPKACSRMD*AHLHWKACF 393 HY++H R Q+C +A SR D LH K F Sbjct: 437 HYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRHF 470
>ECM30_YEAST (Q06673) Extracellular matrix protein 30| Length = 1274 Score = 29.3 bits (64), Expect = 5.5 Identities = 20/51 (39%), Positives = 27/51 (52%) Frame = -2 Query: 351 TSFGTFLHIIGSLNTVPFIMFLIVPFGLLHICFRLNSLTRSSSGVIVAHLI 199 +SF LHII SLN F ++ F L+I NSL S +G+ + LI Sbjct: 97 SSFKKILHIISSLNPPNFNNLIV--FLSLYIILSANSLPASRTGLHSSRLI 145
>ZF260_HUMAN (Q3ZCT1) Zinc finger protein 260 homolog (Zfp-260)| Length = 409 Score = 28.9 bits (63), Expect = 7.2 Identities = 12/33 (36%), Positives = 19/33 (57%) Frame = +1 Query: 289 EHYKRHRVQRANYMQECPKACSRMD*AHLHWKA 387 EH K H ++++ EC K CSR+ LH ++ Sbjct: 41 EHKKMHTGEKSHECTECGKVCSRVSSLTLHLRS 73
>ASSY_METBA (P13257) Argininosuccinate synthase (EC 6.3.4.5)| (Citrulline--aspartate ligase) Length = 396 Score = 28.9 bits (63), Expect = 7.2 Identities = 25/97 (25%), Positives = 42/97 (43%) Frame = +2 Query: 50 YSGSLSRXKLIFPFLDLDIKYFDLGVLHRDATDDKVTVEAAEATLKYNVAIKCATITPDE 229 YSG L I P L Y ++ + D + ++ A+A + ++ K TI E Sbjct: 9 YSGGLDTSVCI-PILKEKYGYDEVVTISVDVGQPEEEIKRADAKAE-KISNKHYTIDAKE 66 Query: 230 DRVKEFNLKQMWRSPNGTIRNIINGTVFREPIICKNV 340 + VK++ + NG+ + GT P+I K V Sbjct: 67 EFVKDYVFPLI--KANGSYEGYVMGTSIARPLIAKKV 101
>SPS1_YEAST (P08458) Sporulation-specific protein 1 (EC 2.7.11.1)| Length = 490 Score = 28.5 bits (62), Expect = 9.4 Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 1/36 (2%) Frame = +2 Query: 374 CIGRHAFGDQYRATDAVLKGPGKLRLV-FEGKDETV 478 CIGR FGD Y+A D V + +++V E DE + Sbjct: 23 CIGRGNFGDVYKAVDRVTQEIVAIKVVNLEHSDEDI 58
>UL33_MCMVS (Q83207) G-protein coupled receptor homolog M33| Length = 377 Score = 28.5 bits (62), Expect = 9.4 Identities = 17/43 (39%), Positives = 26/43 (60%) Frame = +3 Query: 198 LLSVQLLLQMKIGLRSST*NKCGGAQMAQLGTL*TAPCSESQL 326 L S + +LQ + G+RS + Q+A++GTL T CS S+L Sbjct: 326 LFSRRRMLQERAGVRSPSTPHRAARQLAKIGTL-TRSCSRSEL 367 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 70,202,408 Number of Sequences: 219361 Number of extensions: 1449469 Number of successful extensions: 4280 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 4057 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4280 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3188886965 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)