ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags12f06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_466485.1| Oryza sativa (japonica cultivar-group), mRNA 656 0.0
2dbj|AK072777.1| Oryza sativa (japonica cultivar-group) cDNA clon... 656 0.0
3gb|AY846820.1| Triticum aestivum ribosomal protein L6 mRNA, comp... 551 e-154
4ref|XM_472843.1| Oryza sativa (japonica cultivar-group), predic... 500 e-138
5dbj|AK067896.1| Oryza sativa (japonica cultivar-group) cDNA clon... 500 e-138
6gb|AY103559.1| Zea mays PCO112591 mRNA sequence 426 e-116
7dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 278 2e-71
8dbj|AP005874.3| Oryza sativa (japonica cultivar-group) genomic D... 278 2e-71
9dbj|AP005640.2| Oryza sativa (japonica cultivar-group) genomic D... 278 2e-71
10emb|AL606447.3|OSJN00011 Oryza sativa genomic DNA, chromosome 4,... 200 3e-48
11dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 200 3e-48
12emb|X69378.1|MCYL16 M.crystallinum mRNA for ribosomal protein YL16 103 6e-19
13dbj|AB167080.1| Curculigo latifolia NAS-2 mRNA for neoculin acid... 82 2e-12
14gb|DQ226579.1| Boechera divaricarpa isolate SLW-2-D10 mRNA sequence 74 5e-10
15ref|NM_106066.3| Arabidopsis thaliana structural constituent of ... 68 3e-08
16gb|AY062622.1| Arabidopsis thaliana putative 60S ribosomal prote... 68 3e-08
17emb|BX814470.1|CNS0ADLC Arabidopsis thaliana Full-length cDNA Co... 68 3e-08
18gb|BT002588.1| Arabidopsis thaliana putative 60S ribosomal prote... 68 3e-08
19ref|NM_106064.2| Arabidopsis thaliana structural constituent of ... 66 1e-07
20ref|XM_571207.1| Cryptococcus neoformans var. neoformans JEC21 s... 66 1e-07
21gb|AY114641.1| Arabidopsis thaliana putative 60S ribosomal prote... 66 1e-07
22gb|AY081305.1| Arabidopsis thaliana putative 60S ribosomal prote... 66 1e-07
23gb|AY054573.1| Arabidopsis thaliana putative 60S ribosomal prote... 66 1e-07
24gb|AY087325.1| Arabidopsis thaliana clone 3418 mRNA, complete se... 66 1e-07
25gb|AE017345.1| Cryptococcus neoformans var. neoformans JEC21 chr... 64 5e-07
26gb|AC016662.7|AC016662 Arabidopsis thaliana chromosome 1 BAC F2P... 62 2e-06
27emb|BX814105.1|CNS0ADRY Arabidopsis thaliana Full-length cDNA Co... 56 1e-04
28gb|DQ214771.1| Taeniopygia guttata clone 0061P0023H09 ribosomal ... 48 0.028
29gb|DQ214770.1| Taeniopygia guttata clone 0061P0025H04 ribosomal ... 48 0.028
30gb|AC155898.15| Medicago truncatula clone mth2-109f1, complete s... 48 0.028
31dbj|AB035569.1| Chara globularis cgrpl6 mRNA for 60S ribosomal p... 48 0.028
32emb|BX065431.1|CNS09MNF Single read from an extremity of a full-... 46 0.11
33emb|BX065430.1|CNS09MNE Single read from an extremity of a full-... 46 0.11
34emb|BX062222.1|CNS09K6A Single read from an extremity of a full-... 46 0.11
35emb|BX057445.1|CNS09GHL Single read from an extremity of a full-... 46 0.11
36emb|BX048593.1|CNS099NP Single read from an extremity of a full-... 46 0.11
37emb|BX048592.1|CNS099NO Single read from an extremity of a full-... 46 0.11
38emb|BX047227.1|CNS098LR Single read from an extremity of a full-... 46 0.11
39emb|BX047226.1|CNS098LQ Single read from an extremity of a full-... 46 0.11
40emb|BX042740.1|CNS09554 Single read from an extremity of a full-... 46 0.11
41ref|XM_321154.2| Anopheles gambiae str. PEST ENSANGP00000020813 ... 46 0.11
42gb|DQ384529.1| Panax ginseng clone PG6L-6 unknown mRNA 44 0.44
43gb|AY088336.1| Arabidopsis thaliana clone 573 mRNA, complete seq... 44 0.44
44emb|AJ276271.1|CAR276271 Cicer arietinum mRNA for putative 60S r... 44 0.44
45gb|AY674237.1| Ixodes pacificus clone IP_7_60_92_78_CLU ribosoma... 42 1.7
46ref|XM_363819.1| Magnaporthe grisea 70-15 hypothetical protein (... 42 1.7
47emb|AL590447.1|CNS07EGE chromosome VII of strain GB-M1 of Enceph... 42 1.7
48dbj|AB109375.1| Tribolodon hakonensis GDH mRNA for glutamate deh... 42 1.7
49dbj|AP002754.5| Homo sapiens genomic DNA, chromosome 11 clone:RP... 42 1.7
50dbj|AP002380.3| Homo sapiens genomic DNA, chromosome 11 clone:RP... 42 1.7
51emb|AL929433.10| Mouse DNA sequence from clone RP23-193M23 on ch... 42 1.7
52gb|AC004770.1|AC004770 Homo sapiens chromosome 11, BAC CIT-HSP-3... 42 1.7
53gb|AY823671.1| Glycine max HDZip I protein mRNA, complete cds 42 1.7
54gb|BC076927.1| Xenopus tropicalis matrix metalloproteinase 9 (ge... 40 6.9
55gb|AC145554.2| Mus musculus BAC clone RP23-217E22 from chromosom... 40 6.9
56ref|XM_591972.2| PREDICTED: Bos taurus similar to Sodium/hydroge... 40 6.9
57ref|XM_533873.2| PREDICTED: Canis familiaris similar to peptidyl... 40 6.9
58gb|AC117260.3| Mus musculus BAC clone RP24-498G10 from chromosom... 40 6.9
59gb|AC146748.16| Medicago truncatula clone mth2-65k8, complete se... 40 6.9
60gb|AF517879.1| Griffithsia japonica isolate Gj550 ribosome prote... 40 6.9
61emb|BX640451.1| Bordetella bronchiseptica strain RB50, complete ... 40 6.9
62gb|AY831461.1| Pseudomonas putida plasmid pKW1 putative porin ge... 40 6.9
63emb|BX640412.1| Bordetella pertussis strain Tohama I, complete g... 40 6.9
64ref|NM_001006842.1| Xenopus tropicalis matrix metalloproteinase ... 40 6.9
65emb|BX321865.1| Nitrosomonas europaea ATCC 19718, complete genom... 40 6.9
66gb|DQ351275.1| Streptomyces sp. NRRL 30748 meridamycin biosynthe... 40 6.9
67emb|AL627426.19| Mouse DNA sequence from clone RP23-168D2 on chr... 40 6.9
68emb|AL592215.12| Mouse DNA sequence from clone RP23-172P19 on ch... 40 6.9
69gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome 40 6.9
70gb|AC004671.1| Homo sapiens 12p13.3 PAC RPCI3-340I3 (Roswell Par... 40 6.9
71gb|AC067947.6| Homo sapiens BAC clone RP11-492I5 from 2, complet... 40 6.9
72gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, c... 40 6.9
73gb|AE017221.1| Thermus thermophilus HB27, complete genome 40 6.9
74emb|CT025641.10| Mouse DNA sequence from clone RP24-322A17 on ch... 40 6.9
75gb|U93491.1|MUU93491 Meriones unguiculatus NHE-2 mRNA, partial cds 40 6.9 
>ref|XM_466485.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 660

 Score =  656 bits (331), Expect = 0.0
 Identities = 460/503 (91%)
 Strand = Plus / Plus

                                                                       
Query: 8   gggcatcaagcgcgcgtcgcggtcgcactcctatcaccgccgcgggctctgggccatcaa 67
           |||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||
Sbjct: 27  gggcatcaagcgcgcgtcgcggtcgcacacctaccaccgccgcgggctctgggccatcaa 86

                                                                       
Query: 68  ggccaagaacggcggagccttcccaaaggccgagaagccagccgccgtcgccgagcccaa 127
           |||||||||||||||  ||||||| |||||||  ||||| ||||||| ||||||||||||
Sbjct: 87  ggccaagaacggcggcaccttccccaaggccggcaagcccgccgccgccgccgagcccaa 146

                                                                       
Query: 128 gttctaccccgccgacgacgtcaagccccgcaccgccagcacccgcaagcccaaacctac 187
           ||||||||||||||||||||||||||||||| || |||||||||||||| |||| |||||
Sbjct: 147 gttctaccccgccgacgacgtcaagccccgcgcccccagcacccgcaaggccaaccctac 206

                                                                       
Query: 188 caagctcaggtcgaccatcacgcccggcacggtgctgatcctgctcgctgggaggtacat 247
           |||||||||||||||||||||||| || |||||||||||||||||||| |||||||||||
Sbjct: 207 caagctcaggtcgaccatcacgccggggacggtgctgatcctgctcgccgggaggtacat 266

                                                                       
Query: 248 ggggaagcgcgtggtgttcctcaagcagctcaagtctggcctgctcctcatcactggacc 307
           |||||||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 267 ggggaagcgcgtcgtgttcctcaagcagctcaagtccggcctgctcctcatcaccggacc 326

                                                                       
Query: 308 tttcaagatcaatggtgtcccagttcgccgggtgaaccaggcttatgtcattgccacatc 367
           ||| ||||||||||| || ||  | ||||| ||||||||||| || ||||||||||||||
Sbjct: 327 ttttaagatcaatggagtgcccatccgccgtgtgaaccaggcctacgtcattgccacatc 386

                                                                       
Query: 368 cacaaaggttgacatctctggtgttaaggtggagaagtttgatgacaagtactttgctag 427
           ||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||  |
Sbjct: 387 cacgaaggttgacatctctggtgttaaggtggataagtttgatgacaagtactttgcccg 446

                                                                       
Query: 428 ggacaagaaggccagggcaaagaagactgaaggggagctgtttgagactgagaaggaggc 487
           |||||||||||| | ||| |||||||| || || || || |||||||| |||||||||||
Sbjct: 447 ggacaagaaggcaaaggccaagaagaccgagggtgaactttttgagacagagaaggaggc 506

                                  
Query: 488 aaccaagaacctgcctgacttca 510
           ||||||||| ||||| |||||||
Sbjct: 507 aaccaagaatctgcccgacttca 529
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>dbj|AK072777.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023139B06, full
           insert sequence
          Length = 1030

 Score =  656 bits (331), Expect = 0.0
 Identities = 460/503 (91%)
 Strand = Plus / Plus

                                                                       
Query: 8   gggcatcaagcgcgcgtcgcggtcgcactcctatcaccgccgcgggctctgggccatcaa 67
           |||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||
Sbjct: 97  gggcatcaagcgcgcgtcgcggtcgcacacctaccaccgccgcgggctctgggccatcaa 156

                                                                       
Query: 68  ggccaagaacggcggagccttcccaaaggccgagaagccagccgccgtcgccgagcccaa 127
           |||||||||||||||  ||||||| |||||||  ||||| ||||||| ||||||||||||
Sbjct: 157 ggccaagaacggcggcaccttccccaaggccggcaagcccgccgccgccgccgagcccaa 216

                                                                       
Query: 128 gttctaccccgccgacgacgtcaagccccgcaccgccagcacccgcaagcccaaacctac 187
           ||||||||||||||||||||||||||||||| || |||||||||||||| |||| |||||
Sbjct: 217 gttctaccccgccgacgacgtcaagccccgcgcccccagcacccgcaaggccaaccctac 276

                                                                       
Query: 188 caagctcaggtcgaccatcacgcccggcacggtgctgatcctgctcgctgggaggtacat 247
           |||||||||||||||||||||||| || |||||||||||||||||||| |||||||||||
Sbjct: 277 caagctcaggtcgaccatcacgccggggacggtgctgatcctgctcgccgggaggtacat 336

                                                                       
Query: 248 ggggaagcgcgtggtgttcctcaagcagctcaagtctggcctgctcctcatcactggacc 307
           |||||||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 337 ggggaagcgcgtcgtgttcctcaagcagctcaagtccggcctgctcctcatcaccggacc 396

                                                                       
Query: 308 tttcaagatcaatggtgtcccagttcgccgggtgaaccaggcttatgtcattgccacatc 367
           ||| ||||||||||| || ||  | ||||| ||||||||||| || ||||||||||||||
Sbjct: 397 ttttaagatcaatggagtgcccatccgccgtgtgaaccaggcctacgtcattgccacatc 456

                                                                       
Query: 368 cacaaaggttgacatctctggtgttaaggtggagaagtttgatgacaagtactttgctag 427
           ||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||  |
Sbjct: 457 cacgaaggttgacatctctggtgttaaggtggataagtttgatgacaagtactttgcccg 516

                                                                       
Query: 428 ggacaagaaggccagggcaaagaagactgaaggggagctgtttgagactgagaaggaggc 487
           |||||||||||| | ||| |||||||| || || || || |||||||| |||||||||||
Sbjct: 517 ggacaagaaggcaaaggccaagaagaccgagggtgaactttttgagacagagaaggaggc 576

                                  
Query: 488 aaccaagaacctgcctgacttca 510
           ||||||||| ||||| |||||||
Sbjct: 577 aaccaagaatctgcccgacttca 599
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>gb|AY846820.1| Triticum aestivum ribosomal protein L6 mRNA, complete cds
          Length = 686

 Score =  551 bits (278), Expect = e-154
 Identities = 452/510 (88%)
 Strand = Plus / Plus

                                                                       
Query: 1   tggcgctgggcatcaagcgcgcgtcgcggtcgcactcctatcaccgccgcgggctctggg 60
           ||||||| ||||| ||||| |||||| | |||||| |||| |||||||||||||| ||||
Sbjct: 39  tggcgctcggcataaagcgggcgtcgagatcgcacacctaccaccgccgcgggctttggg 98

                                                                       
Query: 61  ccatcaaggccaagaacggcggagccttcccaaaggccgagaagccagccgccgtcgccg 120
           |||||||||||||| ||||||| ||||| || |||||||||||||| |||||| ||||||
Sbjct: 99  ccatcaaggccaagcacggcggcgccttgcccaaggccgagaagccggccgccatcgccg 158

                                                                       
Query: 121 agcccaagttctaccccgccgacgacgtcaagccccgcaccgccagcacccgcaagccca 180
           ||||||||||||| ||||| || || |||||||| |||||||  ||||| ||||||||| 
Sbjct: 159 agcccaagttctatcccgctgatgatgtcaagccacgcaccgtgagcacacgcaagcccc 218

                                                                       
Query: 181 aacctaccaagctcaggtcgaccatcacgcccggcacggtgctgatcctgctcgctggga 240
           | || ||||||||||||||||||||||| || ||||||||||||||||||||||| ||||
Sbjct: 219 atcccaccaagctcaggtcgaccatcacaccgggcacggtgctgatcctgctcgcgggga 278

                                                                       
Query: 241 ggtacatggggaagcgcgtggtgttcctcaagcagctcaagtctggcctgctcctcatca 300
           |||||||||| ||||||||||||||||||||||||||| |||| ||||| ||||||||||
Sbjct: 279 ggtacatgggaaagcgcgtggtgttcctcaagcagctccagtccggccttctcctcatca 338

                                                                       
Query: 301 ctggacctttcaagatcaatggtgtcccagttcgccgggtgaaccaggcttatgtcattg 360
           |||||||||||||||||||||| || ||| | ||| | |||||||||||||| |||||||
Sbjct: 339 ctggacctttcaagatcaatggcgtgccaatccgcagagtgaaccaggcttacgtcattg 398

                                                                       
Query: 361 ccacatccacaaaggttgacatctctggtgttaaggtggagaagtttgatgacaagtact 420
           |||||||||||||||| |||||||||   ||||| ||| |||||||||||||||||||||
Sbjct: 399 ccacatccacaaaggtcgacatctctaaggttaatgtgcagaagtttgatgacaagtact 458

                                                                       
Query: 421 ttgctagggacaagaaggccagggcaaagaagactgaaggggagctgtttgagactgaga 480
           | |||||||| |||||| | ||||||||||||||||| || ||||| |||||| | || |
Sbjct: 459 tcgctagggagaagaagactagggcaaagaagactgagggcgagctatttgagtcggata 518

                                         
Query: 481 aggaggcaaccaagaacctgcctgacttca 510
           ||||||||||||||||  |||| |||||||
Sbjct: 519 aggaggcaaccaagaatttgccagacttca 548
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>ref|XM_472843.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 669

 Score =  500 bits (252), Expect = e-138
 Identities = 440/504 (87%), Gaps = 9/504 (1%)
 Strand = Plus / Plus

                                                                       
Query: 8   gggcatcaagcgcgcgtcgcggtcgcactcctatcaccgccgcgggctctgggccatcaa 67
           ||||||||||   ||||||||||||||| | || |||||||||||||| |||||||||||
Sbjct: 27  gggcatcaagaaggcgtcgcggtcgcacacgtaccaccgccgcgggctgtgggccatcaa 86

                                                                       
Query: 68  ggccaagaacggcggagccttcccaaaggccgagaagcc---------agccgccgtcgc 118
           ||||||| ||||||| |||||||| ||||||||||||||         |||||||| |||
Sbjct: 87  ggccaagcacggcggcgccttccccaaggccgagaagcccgccgccgcagccgccgccgc 146

                                                                       
Query: 119 cgagcccaagttctaccccgccgacgacgtcaagccccgcaccgccagcacccgcaagcc 178
           || |||||||||||||||||||||||||||||||||||||    ||||||||||||||||
Sbjct: 147 cgcgcccaagttctaccccgccgacgacgtcaagccccgccagcccagcacccgcaagcc 206

                                                                       
Query: 179 caaacctaccaagctcaggtcgaccatcacgcccggcacggtgctgatcctgctcgctgg 238
           ||| |||||||||||||||||| |||||||||| || || ||||||||||||||||| ||
Sbjct: 207 caaccctaccaagctcaggtcgtccatcacgcctgggacagtgctgatcctgctcgccgg 266

                                                                       
Query: 239 gaggtacatggggaagcgcgtggtgttcctcaagcagctcaagtctggcctgctcctcat 298
           ||||| ||||||||||||||| |||||||||||||||||||| || |||||||| ||| |
Sbjct: 267 gaggttcatggggaagcgcgtcgtgttcctcaagcagctcaaatccggcctgcttctcgt 326

                                                                       
Query: 299 cactggacctttcaagatcaatggtgtcccagttcgccgggtgaaccaggcttatgtcat 358
           ||| |||||||| ||||||||||| || ||  | ||||| ||||||||| | || |||||
Sbjct: 327 caccggaccttttaagatcaatggagttccgatccgccgtgtgaaccagccctacgtcat 386

                                                                       
Query: 359 tgccacatccacaaaggttgacatctctggtgttaaggtggagaagtttgatgacaagta 418
           ||| || |||||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 387 tgctacgtccacaaaggttgatatctctggtgttaatgtggagaagtttgatgacaagta 446

                                                                       
Query: 419 ctttgctagggacaagaaggccagggcaaagaagactgaaggggagctgtttgagactga 478
           |||  ||||||||||||||   | ||| |||||||| || || || || |||||||||||
Sbjct: 447 cttctctagggacaagaagcagaaggcgaagaagaccgagggtgaactttttgagactga 506

                                   
Query: 479 gaaggaggcaaccaagaacctgcc 502
           ||||||||||||||||||||||||
Sbjct: 507 gaaggaggcaaccaagaacctgcc 530
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>dbj|AK067896.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013123D20, full
           insert sequence
          Length = 933

 Score =  500 bits (252), Expect = e-138
 Identities = 440/504 (87%), Gaps = 9/504 (1%)
 Strand = Plus / Plus

                                                                       
Query: 8   gggcatcaagcgcgcgtcgcggtcgcactcctatcaccgccgcgggctctgggccatcaa 67
           ||||||||||   ||||||||||||||| | || |||||||||||||| |||||||||||
Sbjct: 81  gggcatcaagaaggcgtcgcggtcgcacacgtaccaccgccgcgggctgtgggccatcaa 140

                                                                       
Query: 68  ggccaagaacggcggagccttcccaaaggccgagaagcc---------agccgccgtcgc 118
           ||||||| ||||||| |||||||| ||||||||||||||         |||||||| |||
Sbjct: 141 ggccaagcacggcggcgccttccccaaggccgagaagcccgccgccgcagccgccgccgc 200

                                                                       
Query: 119 cgagcccaagttctaccccgccgacgacgtcaagccccgcaccgccagcacccgcaagcc 178
           || |||||||||||||||||||||||||||||||||||||    ||||||||||||||||
Sbjct: 201 cgcgcccaagttctaccccgccgacgacgtcaagccccgccagcccagcacccgcaagcc 260

                                                                       
Query: 179 caaacctaccaagctcaggtcgaccatcacgcccggcacggtgctgatcctgctcgctgg 238
           ||| |||||||||||||||||| |||||||||| || || ||||||||||||||||| ||
Sbjct: 261 caaccctaccaagctcaggtcgtccatcacgcctgggacagtgctgatcctgctcgccgg 320

                                                                       
Query: 239 gaggtacatggggaagcgcgtggtgttcctcaagcagctcaagtctggcctgctcctcat 298
           ||||| ||||||||||||||| |||||||||||||||||||| || |||||||| ||| |
Sbjct: 321 gaggttcatggggaagcgcgtcgtgttcctcaagcagctcaaatccggcctgcttctcgt 380

                                                                       
Query: 299 cactggacctttcaagatcaatggtgtcccagttcgccgggtgaaccaggcttatgtcat 358
           ||| |||||||| ||||||||||| || ||  | ||||| ||||||||| | || |||||
Sbjct: 381 caccggaccttttaagatcaatggagttccgatccgccgtgtgaaccagccctacgtcat 440

                                                                       
Query: 359 tgccacatccacaaaggttgacatctctggtgttaaggtggagaagtttgatgacaagta 418
           ||| || |||||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 441 tgctacgtccacaaaggttgatatctctggtgttaatgtggagaagtttgatgacaagta 500

                                                                       
Query: 419 ctttgctagggacaagaaggccagggcaaagaagactgaaggggagctgtttgagactga 478
           |||  ||||||||||||||   | ||| |||||||| || || || || |||||||||||
Sbjct: 501 cttctctagggacaagaagcagaaggcgaagaagaccgagggtgaactttttgagactga 560

                                   
Query: 479 gaaggaggcaaccaagaacctgcc 502
           ||||||||||||||||||||||||
Sbjct: 561 gaaggaggcaaccaagaacctgcc 584
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>gb|AY103559.1| Zea mays PCO112591 mRNA sequence
          Length = 1361

 Score =  426 bits (215), Expect = e-116
 Identities = 431/503 (85%)
 Strand = Plus / Plus

                                                                       
Query: 8   gggcatcaagcgcgcgtcgcggtcgcactcctatcaccgccgcgggctctgggccatcaa 67
           ||||||||||||||| |||||||||||| | || || ||||| ||||| |||||||||||
Sbjct: 431 gggcatcaagcgcgcttcgcggtcgcacacgtaccatcgccgtgggctgtgggccatcaa 490

                                                                       
Query: 68  ggccaagaacggcggagccttcccaaaggccgagaagccagccgccgtcgccgagcccaa 127
           ||||||||||||||| |||||||| |||||||| ||| | ||||||| ||  || |||||
Sbjct: 491 ggccaagaacggcggcgccttccccaaggccgacaaggccgccgccgccgtggaacccaa 550

                                                                       
Query: 128 gttctaccccgccgacgacgtcaagccccgcaccgccagcacccgcaagcccaaacctac 187
           ||||||||| |||||||||||||||||||||    |||||||||||||||| || |||||
Sbjct: 551 gttctaccctgccgacgacgtcaagccccgcgttcccagcacccgcaagcctaagcctac 610

                                                                       
Query: 188 caagctcaggtcgaccatcacgcccggcacggtgctgatcctgctcgctgggaggtacat 247
           |||||||||||||| ||||||||| || |||||||||||||| ||||| ||| | | |||
Sbjct: 611 caagctcaggtcgagcatcacgcctgggacggtgctgatcctcctcgcagggcgcttcat 670

                                                                       
Query: 248 ggggaagcgcgtggtgttcctcaagcagctcaagtctggcctgctcctcatcactggacc 307
           ||||||| | |||||||| ||||||||||||||||||||||||||||| ||| |||| ||
Sbjct: 671 ggggaagagagtggtgtttctcaagcagctcaagtctggcctgctccttatctctgggcc 730

                                                                       
Query: 308 tttcaagatcaatggtgtcccagttcgccgggtgaaccaggcttatgtcattgccacatc 367
           ||||||||||||||| || ||  | ||||| ||||||||| | ||||||||||| |||||
Sbjct: 731 tttcaagatcaatggagtaccgatccgccgtgtgaaccagacctatgtcattgctacatc 790

                                                                       
Query: 368 cacaaaggttgacatctctggtgttaaggtggagaagtttgatgacaagtactttgctag 427
            || || |||||||||||||||||| | || |  ||||||||||||||||||||||| ||
Sbjct: 791 aaccaaagttgacatctctggtgttgatgtcgccaagtttgatgacaagtactttgccag 850

                                                                       
Query: 428 ggacaagaaggccagggcaaagaagactgaaggggagctgtttgagactgagaaggaggc 487
           ||| ||||||   | ||  |||||||| || || ||||| |||||||| || ||||||||
Sbjct: 851 ggagaagaagcagaaggtgaagaagaccgagggcgagctttttgagacagaaaaggaggc 910

                                  
Query: 488 aaccaagaacctgcctgacttca 510
           | |||||   |||||||||||||
Sbjct: 911 atccaagtcactgcctgacttca 933
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  278 bits (140), Expect = 2e-71
 Identities = 179/192 (93%)
 Strand = Plus / Minus

                                                                            
Query: 8        gggcatcaagcgcgcgtcgcggtcgcactcctatcaccgccgcgggctctgggccatcaa 67
                |||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||
Sbjct: 22903454 gggcatcaagcgcgcgtcgcggtcgcacacctaccaccgccgcgggctctgggccatcaa 22903395

                                                                            
Query: 68       ggccaagaacggcggagccttcccaaaggccgagaagccagccgccgtcgccgagcccaa 127
                |||||||||||||||  ||||||| |||||||  ||||| ||||||| ||||||||||||
Sbjct: 22903394 ggccaagaacggcggcaccttccccaaggccggcaagcccgccgccgccgccgagcccaa 22903335

                                                                            
Query: 128      gttctaccccgccgacgacgtcaagccccgcaccgccagcacccgcaagcccaaacctac 187
                ||||||||||||||||||||||||||||||| || |||||||||||||| |||| |||||
Sbjct: 22903334 gttctaccccgccgacgacgtcaagccccgcgcccccagcacccgcaaggccaaccctac 22903275

                            
Query: 188      caagctcaggtc 199
                ||||||||||||
Sbjct: 22903274 caagctcaggtc 22903263



 Score =  190 bits (96), Expect = 3e-45
 Identities = 162/184 (88%)
 Strand = Plus / Minus

                                                                            
Query: 303      ggacctttcaagatcaatggtgtcccagttcgccgggtgaaccaggcttatgtcattgcc 362
                |||||||| ||||||||||| || ||  | ||||| ||||||||||| || |||||||||
Sbjct: 22902225 ggaccttttaagatcaatggagtgcccatccgccgtgtgaaccaggcctacgtcattgcc 22902166

                                                                            
Query: 363      acatccacaaaggttgacatctctggtgttaaggtggagaagtttgatgacaagtacttt 422
                |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 22902165 acatccacgaaggttgacatctctggtgttaaggtggataagtttgatgacaagtacttt 22902106

                                                                            
Query: 423      gctagggacaagaaggccagggcaaagaagactgaaggggagctgtttgagactgagaag 482
                ||  ||||||||||||| | ||| |||||||| || || || || |||||||| ||||||
Sbjct: 22902105 gcccgggacaagaaggcaaaggccaagaagaccgagggtgaactttttgagacagagaag 22902046

                    
Query: 483      gagg 486
                ||||
Sbjct: 22902045 gagg 22902042



 Score =  174 bits (88), Expect = 2e-40
 Identities = 103/108 (95%)
 Strand = Plus / Minus

                                                                            
Query: 194      caggtcgaccatcacgcccggcacggtgctgatcctgctcgctgggaggtacatggggaa 253
                |||||||||||||||||| || |||||||||||||||||||| |||||||||||||||||
Sbjct: 22903171 caggtcgaccatcacgccggggacggtgctgatcctgctcgccgggaggtacatggggaa 22903112

                                                                
Query: 254      gcgcgtggtgttcctcaagcagctcaagtctggcctgctcctcatcac 301
                |||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 22903111 gcgcgtcgtgttcctcaagcagctcaagtccggcctgctcctcatcac 22903064
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>dbj|AP005874.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0016G10
          Length = 143211

 Score =  278 bits (140), Expect = 2e-71
 Identities = 179/192 (93%)
 Strand = Plus / Minus

                                                                         
Query: 8     gggcatcaagcgcgcgtcgcggtcgcactcctatcaccgccgcgggctctgggccatcaa 67
             |||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||
Sbjct: 23256 gggcatcaagcgcgcgtcgcggtcgcacacctaccaccgccgcgggctctgggccatcaa 23197

                                                                         
Query: 68    ggccaagaacggcggagccttcccaaaggccgagaagccagccgccgtcgccgagcccaa 127
             |||||||||||||||  ||||||| |||||||  ||||| ||||||| ||||||||||||
Sbjct: 23196 ggccaagaacggcggcaccttccccaaggccggcaagcccgccgccgccgccgagcccaa 23137

                                                                         
Query: 128   gttctaccccgccgacgacgtcaagccccgcaccgccagcacccgcaagcccaaacctac 187
             ||||||||||||||||||||||||||||||| || |||||||||||||| |||| |||||
Sbjct: 23136 gttctaccccgccgacgacgtcaagccccgcgcccccagcacccgcaaggccaaccctac 23077

                         
Query: 188   caagctcaggtc 199
             ||||||||||||
Sbjct: 23076 caagctcaggtc 23065



 Score =  190 bits (96), Expect = 3e-45
 Identities = 162/184 (88%)
 Strand = Plus / Minus

                                                                         
Query: 303   ggacctttcaagatcaatggtgtcccagttcgccgggtgaaccaggcttatgtcattgcc 362
             |||||||| ||||||||||| || ||  | ||||| ||||||||||| || |||||||||
Sbjct: 22027 ggaccttttaagatcaatggagtgcccatccgccgtgtgaaccaggcctacgtcattgcc 21968

                                                                         
Query: 363   acatccacaaaggttgacatctctggtgttaaggtggagaagtttgatgacaagtacttt 422
             |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 21967 acatccacgaaggttgacatctctggtgttaaggtggataagtttgatgacaagtacttt 21908

                                                                         
Query: 423   gctagggacaagaaggccagggcaaagaagactgaaggggagctgtttgagactgagaag 482
             ||  ||||||||||||| | ||| |||||||| || || || || |||||||| ||||||
Sbjct: 21907 gcccgggacaagaaggcaaaggccaagaagaccgagggtgaactttttgagacagagaag 21848

                 
Query: 483   gagg 486
             ||||
Sbjct: 21847 gagg 21844



 Score =  174 bits (88), Expect = 2e-40
 Identities = 103/108 (95%)
 Strand = Plus / Minus

                                                                         
Query: 194   caggtcgaccatcacgcccggcacggtgctgatcctgctcgctgggaggtacatggggaa 253
             |||||||||||||||||| || |||||||||||||||||||| |||||||||||||||||
Sbjct: 22973 caggtcgaccatcacgccggggacggtgctgatcctgctcgccgggaggtacatggggaa 22914

                                                             
Query: 254   gcgcgtggtgttcctcaagcagctcaagtctggcctgctcctcatcac 301
             |||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 22913 gcgcgtcgtgttcctcaagcagctcaagtccggcctgctcctcatcac 22866
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>dbj|AP005640.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0006O15
          Length = 139723

 Score =  278 bits (140), Expect = 2e-71
 Identities = 179/192 (93%)
 Strand = Plus / Minus

                                                                          
Query: 8      gggcatcaagcgcgcgtcgcggtcgcactcctatcaccgccgcgggctctgggccatcaa 67
              |||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||
Sbjct: 136792 gggcatcaagcgcgcgtcgcggtcgcacacctaccaccgccgcgggctctgggccatcaa 136733

                                                                          
Query: 68     ggccaagaacggcggagccttcccaaaggccgagaagccagccgccgtcgccgagcccaa 127
              |||||||||||||||  ||||||| |||||||  ||||| ||||||| ||||||||||||
Sbjct: 136732 ggccaagaacggcggcaccttccccaaggccggcaagcccgccgccgccgccgagcccaa 136673

                                                                          
Query: 128    gttctaccccgccgacgacgtcaagccccgcaccgccagcacccgcaagcccaaacctac 187
              ||||||||||||||||||||||||||||||| || |||||||||||||| |||| |||||
Sbjct: 136672 gttctaccccgccgacgacgtcaagccccgcgcccccagcacccgcaaggccaaccctac 136613

                          
Query: 188    caagctcaggtc 199
              ||||||||||||
Sbjct: 136612 caagctcaggtc 136601



 Score =  190 bits (96), Expect = 3e-45
 Identities = 162/184 (88%)
 Strand = Plus / Minus

                                                                          
Query: 303    ggacctttcaagatcaatggtgtcccagttcgccgggtgaaccaggcttatgtcattgcc 362
              |||||||| ||||||||||| || ||  | ||||| ||||||||||| || |||||||||
Sbjct: 135563 ggaccttttaagatcaatggagtgcccatccgccgtgtgaaccaggcctacgtcattgcc 135504

                                                                          
Query: 363    acatccacaaaggttgacatctctggtgttaaggtggagaagtttgatgacaagtacttt 422
              |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 135503 acatccacgaaggttgacatctctggtgttaaggtggataagtttgatgacaagtacttt 135444

                                                                          
Query: 423    gctagggacaagaaggccagggcaaagaagactgaaggggagctgtttgagactgagaag 482
              ||  ||||||||||||| | ||| |||||||| || || || || |||||||| ||||||
Sbjct: 135443 gcccgggacaagaaggcaaaggccaagaagaccgagggtgaactttttgagacagagaag 135384

                  
Query: 483    gagg 486
              ||||
Sbjct: 135383 gagg 135380



 Score =  174 bits (88), Expect = 2e-40
 Identities = 103/108 (95%)
 Strand = Plus / Minus

                                                                          
Query: 194    caggtcgaccatcacgcccggcacggtgctgatcctgctcgctgggaggtacatggggaa 253
              |||||||||||||||||| || |||||||||||||||||||| |||||||||||||||||
Sbjct: 136509 caggtcgaccatcacgccggggacggtgctgatcctgctcgccgggaggtacatggggaa 136450

                                                              
Query: 254    gcgcgtggtgttcctcaagcagctcaagtctggcctgctcctcatcac 301
              |||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 136449 gcgcgtcgtgttcctcaagcagctcaagtccggcctgctcctcatcac 136402
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>emb|AL606447.3|OSJN00011 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0022F23,
             complete sequence
          Length = 130273

 Score =  200 bits (101), Expect = 3e-48
 Identities = 175/201 (87%), Gaps = 9/201 (4%)
 Strand = Plus / Minus

                                                                         
Query: 8     gggcatcaagcgcgcgtcgcggtcgcactcctatcaccgccgcgggctctgggccatcaa 67
             ||||||||||   ||||||||||||||| | || |||||||||||||| |||||||||||
Sbjct: 80935 gggcatcaagaaggcgtcgcggtcgcacacgtaccaccgccgcgggctgtgggccatcaa 80876

                                                                         
Query: 68    ggccaagaacggcggagccttcccaaaggccgagaagcc---------agccgccgtcgc 118
             ||||||| ||||||| |||||||| ||||||||||||||         |||||||| |||
Sbjct: 80875 ggccaagcacggcggcgccttccccaaggccgagaagcccgccgccgcagccgccgccgc 80816

                                                                         
Query: 119   cgagcccaagttctaccccgccgacgacgtcaagccccgcaccgccagcacccgcaagcc 178
             || |||||||||||||||||||||||||||||||||||||    ||||||||||||||||
Sbjct: 80815 cgcgcccaagttctaccccgccgacgacgtcaagccccgccagcccagcacccgcaagcc 80756

                                  
Query: 179   caaacctaccaagctcaggtc 199
             ||| |||||||||||||||||
Sbjct: 80755 caaccctaccaagctcaggtc 80735



 Score =  159 bits (80), Expect = 1e-35
 Identities = 158/184 (85%)
 Strand = Plus / Minus

                                                                         
Query: 303   ggacctttcaagatcaatggtgtcccagttcgccgggtgaaccaggcttatgtcattgcc 362
             |||||||| ||||||||||| || ||  | ||||| ||||||||| | || |||||||| 
Sbjct: 79487 ggaccttttaagatcaatggagttccgatccgccgtgtgaaccagccctacgtcattgct 79428

                                                                         
Query: 363   acatccacaaaggttgacatctctggtgttaaggtggagaagtttgatgacaagtacttt 422
             || |||||||||||||| |||||||||||||| |||||||||||||||||||||||||| 
Sbjct: 79427 acgtccacaaaggttgatatctctggtgttaatgtggagaagtttgatgacaagtacttc 79368

                                                                         
Query: 423   gctagggacaagaaggccagggcaaagaagactgaaggggagctgtttgagactgagaag 482
              ||||||||||||||   | ||| |||||||| || || || || |||||||||||||||
Sbjct: 79367 tctagggacaagaagcagaaggcgaagaagaccgagggtgaactttttgagactgagaag 79308

                 
Query: 483   gagg 486
             ||||
Sbjct: 79307 gagg 79304



 Score =  127 bits (64), Expect = 4e-26
 Identities = 97/108 (89%)
 Strand = Plus / Minus

                                                                         
Query: 194   caggtcgaccatcacgcccggcacggtgctgatcctgctcgctgggaggtacatggggaa 253
             ||||||| |||||||||| || || ||||||||||||||||| ||||||| |||||||||
Sbjct: 80643 caggtcgtccatcacgcctgggacagtgctgatcctgctcgccgggaggttcatggggaa 80584

                                                             
Query: 254   gcgcgtggtgttcctcaagcagctcaagtctggcctgctcctcatcac 301
             |||||| |||||||||||||||||||| || |||||||| ||| ||||
Sbjct: 80583 gcgcgtcgtgttcctcaagcagctcaaatccggcctgcttctcgtcac 80536
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  200 bits (101), Expect = 3e-48
 Identities = 175/201 (87%), Gaps = 9/201 (4%)
 Strand = Plus / Minus

                                                                            
Query: 8        gggcatcaagcgcgcgtcgcggtcgcactcctatcaccgccgcgggctctgggccatcaa 67
                ||||||||||   ||||||||||||||| | || |||||||||||||| |||||||||||
Sbjct: 23638254 gggcatcaagaaggcgtcgcggtcgcacacgtaccaccgccgcgggctgtgggccatcaa 23638195

                                                                            
Query: 68       ggccaagaacggcggagccttcccaaaggccgagaagcc---------agccgccgtcgc 118
                ||||||| ||||||| |||||||| ||||||||||||||         |||||||| |||
Sbjct: 23638194 ggccaagcacggcggcgccttccccaaggccgagaagcccgccgccgcagccgccgccgc 23638135

                                                                            
Query: 119      cgagcccaagttctaccccgccgacgacgtcaagccccgcaccgccagcacccgcaagcc 178
                || |||||||||||||||||||||||||||||||||||||    ||||||||||||||||
Sbjct: 23638134 cgcgcccaagttctaccccgccgacgacgtcaagccccgccagcccagcacccgcaagcc 23638075

                                     
Query: 179      caaacctaccaagctcaggtc 199
                ||| |||||||||||||||||
Sbjct: 23638074 caaccctaccaagctcaggtc 23638054



 Score =  159 bits (80), Expect = 1e-35
 Identities = 158/184 (85%)
 Strand = Plus / Minus

                                                                            
Query: 303      ggacctttcaagatcaatggtgtcccagttcgccgggtgaaccaggcttatgtcattgcc 362
                |||||||| ||||||||||| || ||  | ||||| ||||||||| | || |||||||| 
Sbjct: 23636806 ggaccttttaagatcaatggagttccgatccgccgtgtgaaccagccctacgtcattgct 23636747

                                                                            
Query: 363      acatccacaaaggttgacatctctggtgttaaggtggagaagtttgatgacaagtacttt 422
                || |||||||||||||| |||||||||||||| |||||||||||||||||||||||||| 
Sbjct: 23636746 acgtccacaaaggttgatatctctggtgttaatgtggagaagtttgatgacaagtacttc 23636687

                                                                            
Query: 423      gctagggacaagaaggccagggcaaagaagactgaaggggagctgtttgagactgagaag 482
                 ||||||||||||||   | ||| |||||||| || || || || |||||||||||||||
Sbjct: 23636686 tctagggacaagaagcagaaggcgaagaagaccgagggtgaactttttgagactgagaag 23636627

                    
Query: 483      gagg 486
                ||||
Sbjct: 23636626 gagg 23636623



 Score =  127 bits (64), Expect = 4e-26
 Identities = 97/108 (89%)
 Strand = Plus / Minus

                                                                            
Query: 194      caggtcgaccatcacgcccggcacggtgctgatcctgctcgctgggaggtacatggggaa 253
                ||||||| |||||||||| || || ||||||||||||||||| ||||||| |||||||||
Sbjct: 23637962 caggtcgtccatcacgcctgggacagtgctgatcctgctcgccgggaggttcatggggaa 23637903

                                                                
Query: 254      gcgcgtggtgttcctcaagcagctcaagtctggcctgctcctcatcac 301
                |||||| |||||||||||||||||||| || |||||||| ||| ||||
Sbjct: 23637902 gcgcgtcgtgttcctcaagcagctcaaatccggcctgcttctcgtcac 23637855
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>emb|X69378.1|MCYL16 M.crystallinum mRNA for ribosomal protein YL16
          Length = 1015

 Score =  103 bits (52), Expect = 6e-19
 Identities = 106/124 (85%)
 Strand = Plus / Plus

                                                                       
Query: 298 tcactggacctttcaagatcaatggtgtcccagttcgccgggtgaaccaggcttatgtca 357
           ||||||| ||||| ||| |||||||||||||  |  | || |||||||| || ||||| |
Sbjct: 418 tcactggtccttttaaggtcaatggtgtccctctgaggcgtgtgaaccaagcctatgtta 477

                                                                       
Query: 358 ttgccacatccacaaaggttgacatctctggtgttaaggtggagaagtttgatgacaagt 417
           ||||||| || || ||||||||||| |||||||| || ||||||||||||||||||||||
Sbjct: 478 ttgccacctcaaccaaggttgacatttctggtgtcaatgtggagaagtttgatgacaagt 537

               
Query: 418 actt 421
           ||||
Sbjct: 538 actt 541



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 123 cccaagttctaccccgccgacgacgtcaag 152
           |||||||||||||| |||||||| ||||||
Sbjct: 243 cccaagttctaccctgccgacgatgtcaag 272



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 54  ctctgggccatcaaggccaagaacggcgg 82
           |||||||||||||||||||| || |||||
Sbjct: 159 ctctgggccatcaaggccaaaaatggcgg 187
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>dbj|AB167080.1| Curculigo latifolia NAS-2 mRNA for neoculin acid subunit, complete
           cds
          Length = 655

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 89/105 (84%)
 Strand = Plus / Minus

                                                                       
Query: 173 caagcccaaacctaccaagctcaggtcgaccatcacgcccggcacggtgctgatcctgct 232
           ||||||||| || |||||||||||| ||| ||| || || || |||||||||||||| ||
Sbjct: 105 caagcccaagcccaccaagctcaggccgagcattactccggggacggtgctgatccttct 46

                                                        
Query: 233 cgctgggaggtacatggggaagcgcgtggtgttcctcaagcagct 277
           ||| ||||||| |||||||||| | || || ||||| ||||||||
Sbjct: 45  cgccgggaggttcatggggaagagggtcgttttcctgaagcagct 1
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>gb|DQ226579.1| Boechera divaricarpa isolate SLW-2-D10 mRNA sequence
          Length = 693

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 100/121 (82%)
 Strand = Plus / Minus

                                                                       
Query: 303 ggacctttcaagatcaatggtgtcccagttcgccgggtgaaccaggcttatgtcattgcc 362
           ||||| ||||||||||||||||| ||| |  | || || |||||||| ||||| ||||  
Sbjct: 429 ggaccattcaagatcaatggtgttccattgagacgtgttaaccaggcctatgtgattgga 370

                                                                       
Query: 363 acatccacaaaggttgacatctctggtgttaaggtggagaagtttgatgacaagtacttt 422
           || ||||||||||||||||||||||| || ||  | ||||| || ||||||||||| |||
Sbjct: 369 acttccacaaaggttgacatctctggagtcaacattgagaaattcgatgacaagtatttt 310

            
Query: 423 g 423
           |
Sbjct: 309 g 309
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>ref|NM_106066.3| Arabidopsis thaliana structural constituent of ribosome AT1G74060
           mRNA, complete cds
          Length = 967

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 79/94 (84%)
 Strand = Plus / Plus

                                                                       
Query: 300 actggacctttcaagatcaatggtgtcccagttcgccgggtgaaccaggcttatgtcatt 359
           |||||||| ||||||||||||||||| ||  |  | || || |||||||| |||||||||
Sbjct: 429 actggaccattcaagatcaatggtgttcctctgagacgtgttaaccaggcctatgtcatt 488

                                             
Query: 360 gccacatccacaaaggttgacatctctggtgtta 393
           |  || ||||||||||||||||| ||||| ||||
Sbjct: 489 ggtacttccacaaaggttgacatttctggagtta 522
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>gb|AY062622.1| Arabidopsis thaliana putative 60S ribosomal protein L6 (F2P9.7)
           mRNA, complete cds
          Length = 942

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 79/94 (84%)
 Strand = Plus / Plus

                                                                       
Query: 300 actggacctttcaagatcaatggtgtcccagttcgccgggtgaaccaggcttatgtcatt 359
           |||||||| ||||||||||||||||| ||  |  | || || |||||||| |||||||||
Sbjct: 424 actggaccattcaagatcaatggtgttcctctgagacgtgttaaccaggcctatgtcatt 483

                                             
Query: 360 gccacatccacaaaggttgacatctctggtgtta 393
           |  || ||||||||||||||||| ||||| ||||
Sbjct: 484 ggtacttccacaaaggttgacatttctggagtta 517
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>emb|BX814470.1|CNS0ADLC Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB75ZG07 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 942

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 79/94 (84%)
 Strand = Plus / Plus

                                                                       
Query: 300 actggacctttcaagatcaatggtgtcccagttcgccgggtgaaccaggcttatgtcatt 359
           |||||||| ||||||||||||||||| ||  |  | || || |||||||| |||||||||
Sbjct: 421 actggaccattcaagatcaatggtgttcctctgagacgtgttaaccaggcctatgtcatt 480

                                             
Query: 360 gccacatccacaaaggttgacatctctggtgtta 393
           |  || ||||||||||||||||| ||||| ||||
Sbjct: 481 ggtacttccacaaaggttgacatttctggagtta 514
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>gb|BT002588.1| Arabidopsis thaliana putative 60S ribosomal protein L6 (At1g74060)
           mRNA, complete cds
          Length = 789

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 79/94 (84%)
 Strand = Plus / Plus

                                                                       
Query: 300 actggacctttcaagatcaatggtgtcccagttcgccgggtgaaccaggcttatgtcatt 359
           |||||||| ||||||||||||||||| ||  |  | || || |||||||| |||||||||
Sbjct: 361 actggaccattcaagatcaatggtgttcctctgagacgtgttaaccaggcctatgtcatt 420

                                             
Query: 360 gccacatccacaaaggttgacatctctggtgtta 393
           |  || ||||||||||||||||| ||||| ||||
Sbjct: 421 ggtacttccacaaaggttgacatttctggagtta 454
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>ref|NM_106064.2| Arabidopsis thaliana structural constituent of ribosome AT1G74050
           mRNA, complete cds
          Length = 1035

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 75/89 (84%)
 Strand = Plus / Plus

                                                                       
Query: 300 actggacctttcaagatcaatggtgtcccagttcgccgggtgaaccaggcttatgtcatt 359
           |||||||| ||||||||||||||||| ||  |  | || || |||||||| ||||| |||
Sbjct: 487 actggaccattcaagatcaatggtgttcctttgagacgtgttaaccaggcctatgtgatt 546

                                        
Query: 360 gccacatccacaaaggttgacatctctgg 388
           | ||| ||||||||||||||||| |||||
Sbjct: 547 ggcacttccacaaaggttgacatttctgg 575
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>ref|XM_571207.1| Cryptococcus neoformans var. neoformans JEC21 structural
           constituent of ribosome (CNE03060) partial mRNA
          Length = 764

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 69/81 (85%)
 Strand = Plus / Plus

                                                                       
Query: 311 caagatcaatggtgtcccagttcgccgggtgaaccaggcttatgtcattgccacatccac 370
           |||| |||| ||||||||  |||| || |||| |||||| |||||||||||||| |||||
Sbjct: 400 caagctcaacggtgtccctcttcgtcgagtgagccaggcctatgtcattgccacttccac 459

                                
Query: 371 aaaggttgacatctctggtgt 391
            ||||| |||||||| |||||
Sbjct: 460 caaggtcgacatctccggtgt 480
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>gb|AY114641.1| Arabidopsis thaliana putative 60S ribosomal protein L6 (At1g74050)
           mRNA, complete cds
          Length = 891

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 75/89 (84%)
 Strand = Plus / Plus

                                                                       
Query: 300 actggacctttcaagatcaatggtgtcccagttcgccgggtgaaccaggcttatgtcatt 359
           |||||||| ||||||||||||||||| ||  |  | || || |||||||| ||||| |||
Sbjct: 361 actggaccattcaagatcaatggtgttcctttgagacgtgttaaccaggcctatgtgatt 420

                                        
Query: 360 gccacatccacaaaggttgacatctctgg 388
           | ||| ||||||||||||||||| |||||
Sbjct: 421 ggcacttccacaaaggttgacatttctgg 449
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>gb|AY081305.1| Arabidopsis thaliana putative 60S ribosomal protein L6 (At1g74050)
           mRNA, complete cds
          Length = 960

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 75/89 (84%)
 Strand = Plus / Plus

                                                                       
Query: 300 actggacctttcaagatcaatggtgtcccagttcgccgggtgaaccaggcttatgtcatt 359
           |||||||| ||||||||||||||||| ||  |  | || || |||||||| ||||| |||
Sbjct: 413 actggaccattcaagatcaatggtgttcctttgagacgtgttaaccaggcctatgtgatt 472

                                        
Query: 360 gccacatccacaaaggttgacatctctgg 388
           | ||| ||||||||||||||||| |||||
Sbjct: 473 ggcacttccacaaaggttgacatttctgg 501
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>gb|AY054573.1| Arabidopsis thaliana putative 60S ribosomal protein L6 (At1g74050;
           F2P9.8) mRNA, complete cds
          Length = 892

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 75/89 (84%)
 Strand = Plus / Plus

                                                                       
Query: 300 actggacctttcaagatcaatggtgtcccagttcgccgggtgaaccaggcttatgtcatt 359
           |||||||| ||||||||||||||||| ||  |  | || || |||||||| ||||| |||
Sbjct: 417 actggaccattcaagatcaatggtgttcctttgagacgtgttaaccaggcctatgtgatt 476

                                        
Query: 360 gccacatccacaaaggttgacatctctgg 388
           | ||| ||||||||||||||||| |||||
Sbjct: 477 ggcacttccacaaaggttgacatttctgg 505
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>gb|AY087325.1| Arabidopsis thaliana clone 3418 mRNA, complete sequence
          Length = 985

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 75/89 (84%)
 Strand = Plus / Plus

                                                                       
Query: 300 actggacctttcaagatcaatggtgtcccagttcgccgggtgaaccaggcttatgtcatt 359
           |||||||| ||||||||||||||||| ||  |  | || || |||||||| ||||| |||
Sbjct: 487 actggaccattcaagatcaatggtgttcctttgagacgtgttaaccaggcctatgtgatt 546

                                        
Query: 360 gccacatccacaaaggttgacatctctgg 388
           | ||| ||||||||||||||||| |||||
Sbjct: 547 ggcacttccacaaaggttgacatttctgg 575
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>gb|AE017345.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 5, complete
              sequence
          Length = 1507550

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 65/76 (85%)
 Strand = Plus / Plus

                                                                          
Query: 316    tcaatggtgtcccagttcgccgggtgaaccaggcttatgtcattgccacatccacaaagg 375
              |||| ||||||||  |||| || |||| |||||| |||||||||||||| ||||| ||||
Sbjct: 868777 tcaacggtgtccctcttcgtcgagtgagccaggcctatgtcattgccacttccaccaagg 868836

                              
Query: 376    ttgacatctctggtgt 391
              | |||||||| |||||
Sbjct: 868837 tcgacatctccggtgt 868852
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>gb|AC016662.7|AC016662 Arabidopsis thaliana chromosome 1 BAC F2P9 genomic sequence, complete
             sequence
          Length = 108387

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 76/91 (83%)
 Strand = Plus / Plus

                                                                         
Query: 303   ggacctttcaagatcaatggtgtcccagttcgccgggtgaaccaggcttatgtcattgcc 362
             ||||| ||||||||||||||||| ||  |  | || || |||||||| ||||||||||  
Sbjct: 22667 ggaccattcaagatcaatggtgttcctctgagacgtgttaaccaggcctatgtcattggt 22726

                                            
Query: 363   acatccacaaaggttgacatctctggtgtta 393
             || ||||||||||||||||| ||||| ||||
Sbjct: 22727 acttccacaaaggttgacatttctggagtta 22757



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 72/86 (83%)
 Strand = Plus / Plus

                                                                         
Query: 303   ggacctttcaagatcaatggtgtcccagttcgccgggtgaaccaggcttatgtcattgcc 362
             ||||| ||||||||||||||||| ||  |  | || || |||||||| ||||| |||| |
Sbjct: 25405 ggaccattcaagatcaatggtgttcctttgagacgtgttaaccaggcctatgtgattggc 25464

                                       
Query: 363   acatccacaaaggttgacatctctgg 388
             || ||||||||||||||||| |||||
Sbjct: 25465 acttccacaaaggttgacatttctgg 25490
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>emb|BX814105.1|CNS0ADRY Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB57ZF05 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 440

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                               
Query: 342 aaccaggcttatgtcattgccacatccacaaaggttgacatctctggtgtta 393
           |||||||| ||||| |||| ||| ||||||||||||||||| ||||| ||||
Sbjct: 12  aaccaggcctatgtgattggcacttccacaaaggttgacatttctggagtta 63
to top
>gb|DQ214771.1| Taeniopygia guttata clone 0061P0023H09 ribosomal protein L6
           internal polyA variant-like mRNA, complete sequence
          Length = 950

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 202 ccatcacgcccggcacggtgctgatcctgctc 233
           ||||||| |||||||||||||| |||||||||
Sbjct: 462 ccatcacccccggcacggtgctcatcctgctc 493



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 357 attgccacatccacaaaggt 376
           ||||||||||||||||||||
Sbjct: 617 attgccacatccacaaaggt 636
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>gb|DQ214770.1| Taeniopygia guttata clone 0061P0025H04 ribosomal protein L6
           internal polyA variant-like mRNA, complete sequence
          Length = 959

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 202 ccatcacgcccggcacggtgctgatcctgctc 233
           ||||||| |||||||||||||| |||||||||
Sbjct: 472 ccatcacccccggcacggtgctcatcctgctc 503



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 357 attgccacatccacaaaggt 376
           ||||||||||||||||||||
Sbjct: 627 attgccacatccacaaaggt 646
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>gb|AC155898.15| Medicago truncatula clone mth2-109f1, complete sequence
          Length = 93173

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 69/84 (82%)
 Strand = Plus / Plus

                                                                       
Query: 339 gtgaaccaggcttatgtcattgccacatccacaaaggttgacatctctggtgttaaggtg 398
           ||||| ||||| ||||| ||||  ||||| || || || || ||||| |||||||| |||
Sbjct: 403 gtgaatcaggcctatgtgattggtacatcaaccaaagtcgatatctccggtgttaatgtg 462

                                   
Query: 399 gagaagtttgatgacaagtacttt 422
           || ||  |||||||||||||||||
Sbjct: 463 gataaccttgatgacaagtacttt 486
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>dbj|AB035569.1| Chara globularis cgrpl6 mRNA for 60S ribosomal protein L6 CgRPL6,
           partial cds
          Length = 609

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 252 aagcgcgtggtgttcctcaagcagctcaagtc 283
           ||||||||||| ||||||||||||||| ||||
Sbjct: 193 aagcgcgtggtattcctcaagcagctcgagtc 224
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>emb|BX065431.1|CNS09MNF Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAC49BC11 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 889

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 209 gcccggcacggtgctgatcctgctcgc 235
           |||||||| ||||||||||||||||||
Sbjct: 531 gcccggcaaggtgctgatcctgctcgc 505
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>emb|BX065430.1|CNS09MNE Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC49BC11 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 1024

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 209 gcccggcacggtgctgatcctgctcgc 235
           |||||||| ||||||||||||||||||
Sbjct: 414 gcccggcaaggtgctgatcctgctcgc 440
to top
>emb|BX062222.1|CNS09K6A Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC43BF05 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 932

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 209 gcccggcacggtgctgatcctgctcgc 235
           |||||||| ||||||||||||||||||
Sbjct: 352 gcccggcaaggtgctgatcctgctcgc 378
to top
>emb|BX057445.1|CNS09GHL Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC37BF06 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 505

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 209 gcccggcacggtgctgatcctgctcgc 235
           |||||||| ||||||||||||||||||
Sbjct: 404 gcccggcaaggtgctgatcctgctcgc 430
to top
>emb|BX048593.1|CNS099NP Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAC23DD05 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 815

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 209 gcccggcacggtgctgatcctgctcgc 235
           |||||||| ||||||||||||||||||
Sbjct: 624 gcccggcaaggtgctgatcctgctcgc 598
to top
>emb|BX048592.1|CNS099NO Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC23DD05 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 867

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 209 gcccggcacggtgctgatcctgctcgc 235
           |||||||| ||||||||||||||||||
Sbjct: 408 gcccggcaaggtgctgatcctgctcgc 434
to top
>emb|BX047227.1|CNS098LR Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAC21BC05 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 524

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 209 gcccggcacggtgctgatcctgctcgc 235
           |||||||| ||||||||||||||||||
Sbjct: 416 gcccggcaaggtgctgatcctgctcgc 390
to top
>emb|BX047226.1|CNS098LQ Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC21BC05 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 904

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 209 gcccggcacggtgctgatcctgctcgc 235
           |||||||| ||||||||||||||||||
Sbjct: 411 gcccggcaaggtgctgatcctgctcgc 437
to top
>emb|BX042740.1|CNS09554 Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC14DF07 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 811

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 209 gcccggcacggtgctgatcctgctcgc 235
           |||||||| ||||||||||||||||||
Sbjct: 416 gcccggcaaggtgctgatcctgctcgc 442
to top
>ref|XM_321154.2| Anopheles gambiae str. PEST ENSANGP00000020813
           (ENSANGG00000018324), partial mRNA
          Length = 946

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 209 gcccggcacggtgctgatcctgctcgc 235
           |||||||| ||||||||||||||||||
Sbjct: 336 gcccggcaaggtgctgatcctgctcgc 362
to top
>gb|DQ384529.1| Panax ginseng clone PG6L-6 unknown mRNA
          Length = 624

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 123 cccaagttctaccccgccgacgacgtcaag 152
           |||||||||||||| || ||||||||||||
Sbjct: 259 cccaagttctacccagctgacgacgtcaag 288



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 397 tggagaagtttgatgacaagtactttgc 424
           ||||||||| ||| ||||||||||||||
Sbjct: 533 tggagaagtatgacgacaagtactttgc 560
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>gb|AY088336.1| Arabidopsis thaliana clone 573 mRNA, complete sequence
          Length = 832

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 70/86 (81%)
 Strand = Plus / Plus

                                                                       
Query: 303 ggacctttcaagatcaatggtgtcccagttcgccgggtgaaccaggcttatgtcattgcc 362
           ||||| |||||||| |||||||| ||| |  | || || ||||| || ||||| ||||  
Sbjct: 392 ggaccattcaagattaatggtgttccattgagacgtgttaaccaagcctatgtgattgga 451

                                     
Query: 363 acatccacaaaggttgacatctctgg 388
           || ||||||||||||||||| |||||
Sbjct: 452 acctccacaaaggttgacatttctgg 477
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>emb|AJ276271.1|CAR276271 Cicer arietinum mRNA for putative 60S ribosomal protein L6 (ORF1)
          Length = 905

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 54  ctctgggccatcaaggccaagaacggcggagccttccc 91
           ||||||||||||||||||||  ||||||| || |||||
Sbjct: 121 ctctgggccatcaaggccaaacacggcggcgctttccc 158
to top
>gb|AY674237.1| Ixodes pacificus clone IP_7_60_92_78_CLU ribosomal protein L6 mRNA,
           complete cds
          Length = 807

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 252 aagcgcgtggtgttcctcaagcagctcaagtctggcctgct 292
           ||||| ||||||||||| |||||||| ||| | ||||||||
Sbjct: 406 aagcgtgtggtgttcctgaagcagctgaagacgggcctgct 446
to top
>ref|XM_363819.1| Magnaporthe grisea 70-15 hypothetical protein (MG01745.4) partial
           mRNA
          Length = 1389

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 408 gatgacaagtactttgctagg 428
           |||||||||||||||||||||
Sbjct: 778 gatgacaagtactttgctagg 798
to top
>emb|AL590447.1|CNS07EGE chromosome VII of strain GB-M1 of Encephalitozoon cuniculi (Microspora)
          Length = 226576

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 433    agaaggccagggcaaagaaga 453
              |||||||||||||||||||||
Sbjct: 139383 agaaggccagggcaaagaaga 139403
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>dbj|AB109375.1| Tribolodon hakonensis GDH mRNA for glutamate dehydrogenase, complete
            cds
          Length = 3540

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 249  gggaagcgcgtggtgttcctcaagcagct 277
            |||||||| ||||| ||||||||||||||
Sbjct: 3109 gggaagcgtgtggtcttcctcaagcagct 3081
to top
>dbj|AP002754.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-855O10, complete
              sequence
          Length = 185766

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 86     cttcccaaaggccgagaagcc 106
              |||||||||||||||||||||
Sbjct: 152757 cttcccaaaggccgagaagcc 152737
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>dbj|AP002380.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-467L20, complete
             sequence
          Length = 188788

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 86    cttcccaaaggccgagaagcc 106
             |||||||||||||||||||||
Sbjct: 49844 cttcccaaaggccgagaagcc 49824
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>emb|AL929433.10| Mouse DNA sequence from clone RP23-193M23 on chromosome 4, complete
              sequence
          Length = 198426

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 282    tctggcctgctcctcatcact 302
              |||||||||||||||||||||
Sbjct: 165257 tctggcctgctcctcatcact 165237
to top
>gb|AC004770.1|AC004770 Homo sapiens chromosome 11, BAC CIT-HSP-311e8 (BC269730) containing the
              hFEN1 gene, complete sequence
          Length = 185035

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 86     cttcccaaaggccgagaagcc 106
              |||||||||||||||||||||
Sbjct: 151474 cttcccaaaggccgagaagcc 151494
to top
>gb|AY823671.1| Glycine max HDZip I protein mRNA, complete cds
          Length = 1747

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                   
Query: 55 tctgggccatcaaggccaagaacgg 79
          ||||||||||||||||||| |||||
Sbjct: 95 tctgggccatcaaggccaaaaacgg 71
to top
>gb|BC076927.1| Xenopus tropicalis matrix metalloproteinase 9 (gelatinase B, 92kDa
            gelatinase, 92kDa type IV collagenase), mRNA (cDNA clone
            MGC:89173 IMAGE:7016488), complete cds
          Length = 2746

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 392  taaggtggagaagtttgatg 411
            ||||||||||||||||||||
Sbjct: 1494 taaggtggagaagtttgatg 1513
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>gb|AC145554.2| Mus musculus BAC clone RP23-217E22 from chromosome 18, complete
             sequence
          Length = 214489

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 283   ctggcctgctcctcatcact 302
             ||||||||||||||||||||
Sbjct: 40005 ctggcctgctcctcatcact 40024
to top
>ref|XM_591972.2| PREDICTED: Bos taurus similar to Sodium/hydrogen exchanger 2
           (Na(+)/H(+) exchanger 2) (NHE-2) (Solute carrier family
           9 member 2) (H7) (LOC514166), partial mRNA
          Length = 959

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 400 agaagtttgatgacaagtac 419
           ||||||||||||||||||||
Sbjct: 6   agaagtttgatgacaagtac 25
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>ref|XM_533873.2| PREDICTED: Canis familiaris similar to peptidylprolyl isomerase A
           isoform 1 (LOC609903), mRNA
          Length = 738

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 398 ggagaagtttgatgacaagtactt 421
           ||||||||||||||||||| ||||
Sbjct: 263 ggagaagtttgatgacaagaactt 286
to top
>gb|AC117260.3| Mus musculus BAC clone RP24-498G10 from chromosome 18, complete
             sequence
          Length = 211919

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 283   ctggcctgctcctcatcact 302
             ||||||||||||||||||||
Sbjct: 71917 ctggcctgctcctcatcact 71898
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>gb|AC146748.16| Medicago truncatula clone mth2-65k8, complete sequence
          Length = 113744

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 402   aagtttgatgacaagtactt 421
             ||||||||||||||||||||
Sbjct: 68015 aagtttgatgacaagtactt 68034
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>gb|AF517879.1| Griffithsia japonica isolate Gj550 ribosome protein L6 mRNA,
           complete cds
          Length = 764

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 254 gcgcgtggtgttcctcaagcagct 277
           |||||||||| |||||||||||||
Sbjct: 306 gcgcgtggtggtcctcaagcagct 329
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>emb|BX640451.1| Bordetella bronchiseptica strain RB50, complete genome; segment 15/16
          Length = 343473

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 205    tcacgcccggcacggtgctg 224
              ||||||||||||||||||||
Sbjct: 143923 tcacgcccggcacggtgctg 143942
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>gb|AY831461.1| Pseudomonas putida plasmid pKW1 putative porin gene, partial cds;
            ORF2 gene, complete cds; meta operon, complete sequence;
            and ORF3, and ORF4 genes, complete cds
          Length = 9632

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 340  tgaaccaggcttatgtcattgcca 363
            ||||||||||||||| ||||||||
Sbjct: 5045 tgaaccaggcttatgccattgcca 5022
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>emb|BX640412.1| Bordetella pertussis strain Tohama I, complete genome; segment 2/12
          Length = 348171

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 205    tcacgcccggcacggtgctg 224
              ||||||||||||||||||||
Sbjct: 299713 tcacgcccggcacggtgctg 299732
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>ref|NM_001006842.1| Xenopus tropicalis matrix metalloproteinase 9 (gelatinase B, 92kDa
            gelatinase, 92kDa type IV collagenase) (mmp9), mRNA
          Length = 2746

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 392  taaggtggagaagtttgatg 411
            ||||||||||||||||||||
Sbjct: 1494 taaggtggagaagtttgatg 1513
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>emb|BX321865.1| Nitrosomonas europaea ATCC 19718, complete genome; segment 10/10
          Length = 66094

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 200   gaccatcacgcccggcacgg 219
             ||||||||||||||||||||
Sbjct: 57116 gaccatcacgcccggcacgg 57135
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>gb|DQ351275.1| Streptomyces sp. NRRL 30748 meridamycin biosynthetic gene cluster and
             flanking regions
          Length = 116831

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 285   ggcctgctcctcatcactgg 304
             ||||||||||||||||||||
Sbjct: 39353 ggcctgctcctcatcactgg 39372
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>emb|AL627426.19| Mouse DNA sequence from clone RP23-168D2 on chromosome 11 Contains the
             5' end of a novel gene, complete sequence
          Length = 96727

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 56    ctgggccatcaaggccaaga 75
             ||||||||||||||||||||
Sbjct: 28562 ctgggccatcaaggccaaga 28543
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>emb|AL592215.12| Mouse DNA sequence from clone RP23-172P19 on chromosome 11 Contains two
             novel genes (4930452L02Rik and B430319H21Rik), the 3' end
             of the gene for a novel protein (1700019I23Rik), the gene
             for a novel protein (4933407G07Rik), the Pmp22 gene for
             peripheral myelin protein and a CpG island, complete
             sequence
          Length = 219468

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 283   ctggcctgctcctcatcact 302
             ||||||||||||||||||||
Sbjct: 90430 ctggcctgctcctcatcact 90411
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>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome
          Length = 4712337

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 100     agaagccagccgccgtcgccgagc 123
               |||||||||||| |||||||||||
Sbjct: 4556403 agaagccagccggcgtcgccgagc 4556380
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>gb|AC004671.1| Homo sapiens 12p13.3 PAC RPCI3-340I3 (Roswell Park Cancer Institute
             Human PAC Library) complete sequence
          Length = 141266

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 403   agtttgatgacaagtacttt 422
             ||||||||||||||||||||
Sbjct: 99707 agtttgatgacaagtacttt 99726
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>gb|AC067947.6| Homo sapiens BAC clone RP11-492I5 from 2, complete sequence
          Length = 137457

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 56    ctgggccatcaaggccaaga 75
             ||||||||||||||||||||
Sbjct: 45609 ctgggccatcaaggccaaga 45590
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>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence
          Length = 3131724

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 137     cgccgacgacgtcaagccccgcaccgcc 164
               |||||||| |||||||||||||| ||||
Sbjct: 2406476 cgccgacggcgtcaagccccgcatcgcc 2406503
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>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 434    gaaggccagggcaaagaaga 453
              ||||||||||||||||||||
Sbjct: 381488 gaaggccagggcaaagaaga 381469
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>emb|CT025641.10| Mouse DNA sequence from clone RP24-322A17 on chromosome 17, complete
              sequence
          Length = 122522

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 256    gcgtggtgttcctcaagcagctca 279
              ||||||||||||||| ||||||||
Sbjct: 100709 gcgtggtgttcctcaggcagctca 100732
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>gb|U93491.1|MUU93491 Meriones unguiculatus NHE-2 mRNA, partial cds
          Length = 317

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 400 agaagtttgatgacaagtac 419
           ||||||||||||||||||||
Sbjct: 64  agaagtttgatgacaagtac 83


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,964,721
Number of Sequences: 3902068
Number of extensions: 3964721
Number of successful extensions: 84847
Number of sequences better than 10.0: 75
Number of HSP's better than 10.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 84460
Number of HSP's gapped (non-prelim): 381
length of query: 510
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 488
effective length of database: 17,147,199,772
effective search space: 8367833488736
effective search space used: 8367833488736
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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