ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags12f02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X82149.1|TAVDAC2 T.aestivum VDAC2 mRNA for voltage dependent... 860 0.0
2ref|XM_475771.1| Oryza sativa (japonica cultivar-group), predic... 228 2e-56
3emb|AJ251562.1|OSA251562 Oryza sativa mRNA for voltage-dependent... 228 2e-56
4dbj|AK071833.1| Oryza sativa (japonica cultivar-group) cDNA clon... 228 2e-56
5gb|AC097112.2| Oryza sativa (japonica cultivar-group) chromosome... 165 2e-37
6dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 165 2e-37
7gb|AF178952.1|AF178952 Zea mays voltage-dependent anion channel ... 123 7e-25
8gb|AY104198.1| Zea mays PCO099812 mRNA sequence 123 7e-25
9ref|NM_191753.1| Oryza sativa (japonica cultivar-group), predic... 82 2e-12
10dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 82 2e-12
11dbj|AP003288.3| Oryza sativa (japonica cultivar-group) genomic D... 82 2e-12
12dbj|AP003408.3| Oryza sativa (japonica cultivar-group) genomic D... 82 2e-12
13gb|AC132491.2| Oryza sativa (japonica cultivar-group) chromosome... 60 9e-06
14gb|AC130611.2| Oryza sativa (japonica cultivar-group) chromosome... 60 9e-06
15gb|BT016491.1| Zea mays clone Contig324 mRNA sequence 56 1e-04
16gb|AY316739.1| Lotus corniculatus var. japonicus VDAC1.3 mRNA, c... 56 1e-04
17gb|AF178951.1|AF178951 Zea mays voltage-dependent anion channel ... 56 1e-04
18ref|XM_450604.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.008
19gb|BT012680.1| Lycopersicon esculentum clone 113526R, mRNA sequence 50 0.008
20dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.008
21dbj|AP005508.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.008
22emb|Y18104.1|OSA18104 Oryza sativa mRNA for voltage-dependent an... 50 0.008
23dbj|AK072129.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.008
24dbj|AK061261.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.008
25dbj|AK060652.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.008
26gb|AC124836.2| Oryza sativa (japonica cultivar-group) chromosome... 48 0.033
27gb|AY316737.1| Lotus corniculatus var. japonicus VDAC1.1 mRNA, c... 46 0.13
28emb|X74799.1|PAAS4EF P.anserina AS4 gene for translation elongat... 46 0.13
29emb|Z25540.1|PSPOR1MR P.sativum pspor1 mRNA encoding porin 46 0.13
30dbj|AP006116.1| Lotus japonicus genomic DNA, chromosome 1, clone... 46 0.13
31dbj|AP004901.1| Lotus japonicus genomic DNA, chromosome 1, clone... 46 0.13
32gb|AC145450.4| Mus musculus strain C57BL/6J clone rp23-430i3, co... 44 0.51
33emb|X77733.1|TAVDAC1 T.aestivum VDAC 1 mRNA 44 0.51
34emb|AL732585.8| Mouse DNA sequence from clone RP23-226M2 on chro... 44 0.51
35gb|AY818398.1| Manihot esculenta glycerophosphodiester phosphodi... 42 2.0
36ref|XM_418162.1| PREDICTED: Gallus gallus similar to type I hair... 42 2.0
37gb|BT014102.1| Lycopersicon esculentum clone 133206R, mRNA sequence 42 2.0
38emb|X80387.1|STPORIN2 S.tuberosum pPOM36II mRNA for 36kDa porinII 42 2.0
39emb|X80386.1|STPORIN1 S.tuberosum pPOM34 mRNA for mitochondrial ... 42 2.0
40dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
41dbj|AP004269.4| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
42dbj|AP005320.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
43gb|AC183761.3| Pan troglodytes BAC clone CH251-710C5 from chromo... 40 8.0
44gb|CP000051.1| Chlamydia trachomatis A/HAR-13, complete genome 40 8.0
45gb|AC122855.4| Mus musculus BAC clone RP23-120H20 from chromosom... 40 8.0
46gb|AY445665.1| Photorhabdus luminescens putative toxin transport... 40 8.0
47gb|AC125172.4| Mus musculus BAC clone RP24-492I4 from chromosome... 40 8.0
48gb|AC092637.2| Homo sapiens BAC clone RP11-358M3 from 7, complet... 40 8.0
49emb|AJ616216.2| Takifugu rubripes ifng gene for interferon gamma... 40 8.0
50emb|X80388.1|STPORIN3 S.tuberosum pPOM36I mRNA for 36kDA porinI 40 8.0
51emb|BX842670.5| Zebrafish DNA sequence from clone DKEY-195A13 in... 40 8.0
52gb|AE001273.1| Chlamydia trachomatis D/UW-3/CX, complete genome 40 8.0
53dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 40 8.0
54gb|AC154461.2| Mus musculus BAC clone RP24-163I13 from 14, compl... 40 8.0
55gb|AY106124.1| Zea mays PCO123686 mRNA sequence 40 8.0
56emb|CT025626.11| Mouse DNA sequence from clone RP24-141G14 on ch... 40 8.0
57gb|AC147719.1| Gallus gallus BAC clone CH261-22J12 from chromoso... 40 8.0 
>emb|X82149.1|TAVDAC2 T.aestivum VDAC2 mRNA for voltage dependent anion channel
          Length = 1174

 Score =  860 bits (434), Expect = 0.0
 Identities = 543/578 (93%), Gaps = 1/578 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tcttgttaacatttctggtgtaattgggactaaggctcttgcttttggtcttgcagttgc 60
           |||||||||| |||||||||| ||||||||||||||  ||||||||||| |||  |||||
Sbjct: 378 tcttgttaacttttctggtgtcattgggactaaggcgtttgcttttggtgttgatgttgc 437

                                                                       
Query: 61  atttgatactgcctctggggacttcaccaagtacaatgctggaatgagccatactaacca 120
           |||||| ||||||||||| |||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 438 atttgacactgcctctggtgacttcaccaagtacaatgctggactgagccacactaacca 497

                                                                       
Query: 121 agatcttactgcttcgttgatgctgaacaacaagggaaacaccctggctgcttcctacta 180
           ||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||
Sbjct: 498 agatcttactgcttcgttgaatctgaacaacaaggtaaacaccctggctgcttcctacta 557

                                                                       
Query: 181 ccaccaggtgcagctcaccactgctgtgggagcagagatcgctcacagcttctcgagcaa 240
           |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 558 ccaccaggtgcagcgcaccactgctgtgggagcagagatcgctcacagcttctcaagcaa 617

                                                                       
Query: 241 cgagaacaccatcaccgtggggacgcagcacgagctggaccccctgaccacccttaaggg 300
           |||||||||||||||| | ||||||||||||||||||||||||||||||||  | |||||
Sbjct: 618 cgagaacaccatcaccattgggacgcagcacgagctggaccccctgaccactgtgaaggg 677

                                                                       
Query: 301 gcgctacaacaactttggcatcgcaagtgcgctcatccagcacgcgtggaggcccaagtc 360
           ||| ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 gcgttacaacaacttcggcgtcgcaagtgcgctcatccagcacgcgtggaggcccaagtc 737

                                                                       
Query: 361 tgtcatcaccttctccaccgaggttgataccaaggccgttgagaagagccccaagttcgg 420
           | ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||
Sbjct: 738 tctcatcaccttctccaccgaggttgacaccaaggccattgagaagagccccaagtttgg 797

                                                                       
Query: 421 gctggccctgtcactcaagccctgatgtgggatttgcgggtgcattaggatgctagcatt 480
           |||||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||
Sbjct: 798 gctggccctgtcactcaagccctgatttgggattcgcgggtgcgttaggatgctagcatt 857

                                                                       
Query: 481 ttggtaccatcagctcttggtccagtgaacaaagc-ttggacggacggaacttgtaatgc 539
           | ||||||||||||||||||||||| ||||||||| |||||| |||||||||||||||||
Sbjct: 858 tcggtaccatcagctcttggtccagcgaacaaagctttggacagacggaacttgtaatgc 917

                                                 
Query: 540 ccaactttggtgatgcgacaaacttatctgtcgttttt 577
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 918 ccaactttggtgatgcgacaaacttatctgtcgttttt 955
to top
>ref|XM_475771.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 843

 Score =  228 bits (115), Expect = 2e-56
 Identities = 354/431 (82%), Gaps = 2/431 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tcttgttaacatttctggtgtaattgggactaaggctcttgcttttggtcttgcagttgc 60
           |||||||| | ||||||||||  |||| |||  |||| ||||| |||||  ||  |||||
Sbjct: 399 tcttgttagcttttctggtgtgtttggaactggggcttttgctgttggtactgatgttgc 458

                                                                       
Query: 61  atttgatactgcctctggggacttcaccaagtacaatgctggaatgagccatactaacca 120
           ||||||||||||  ||||||||||||||||||||||||| ||| ||||||| ||||  | 
Sbjct: 459 atttgatactgcaactggggacttcaccaagtacaatgcgggactgagccacactactcc 518

                                                                       
Query: 121 agatcttactgcttcgttgatgctgaacaacaagggaaacaccctggctgcttcctacta 180
           |||||| |||||  |  || | ||||||||||||||| ||| ||| ||||||||||||||
Sbjct: 519 agatctcactgcagcactgcttctgaacaacaagggagacagccttgctgcttcctacta 578

                                                                       
Query: 181 ccaccaggtgcagc-tcaccactgctgtgggagcagagatcgctcacagcttctcgagca 239
           |||| ||||| |||   || | |||||| ||||||||| | |||||||||||||||||||
Sbjct: 579 ccacaaggtg-agcaaaacaagtgctgttggagcagagctggctcacagcttctcgagca 637

                                                                       
Query: 240 acgagaacaccatcaccgtggggacgcagcacgagctggaccccctgaccacccttaagg 299
           ||||||||||  ||||| | ||||| ||||| |  |||||    || || ||  | ||||
Sbjct: 638 acgagaacactctcaccttcgggacacagcatgccctggatgaactcactactgtgaagg 697

                                                                       
Query: 300 ggcgctacaacaactttggcatcgcaagtgcgctcatccagcacgcgtggaggcccaagt 359
            ||||| ||||||||||||||| || ||||||||||||||||||| ||  ||||||||||
Sbjct: 698 cgcgcttcaacaactttggcatggccagtgcgctcatccagcacgagttcaggcccaagt 757

                                                                       
Query: 360 ctgtcatcaccttctccaccgaggttgataccaaggccgttgagaagagccccaagttcg 419
           |  || ||||| ||||||| |||||||||||||||||| | || |||||| ||||| | |
Sbjct: 758 cgctcgtcaccatctccactgaggttgataccaaggccatcgacaagagctccaaggttg 817

                      
Query: 420 ggctggccctg 430
           ||||| |||||
Sbjct: 818 ggctgtccctg 828
to top
>emb|AJ251562.1|OSA251562 Oryza sativa mRNA for voltage-dependent anion channel (VDAC2 gene)
          Length = 1189

 Score =  228 bits (115), Expect = 2e-56
 Identities = 354/431 (82%), Gaps = 2/431 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tcttgttaacatttctggtgtaattgggactaaggctcttgcttttggtcttgcagttgc 60
           |||||||| | ||||||||||  |||| |||  |||| ||||| |||||  ||  |||||
Sbjct: 438 tcttgttagcttttctggtgtgtttggaactggggcttttgctgttggtactgatgttgc 497

                                                                       
Query: 61  atttgatactgcctctggggacttcaccaagtacaatgctggaatgagccatactaacca 120
           ||||||||||||  ||||||||||||||||||||||||| ||| ||||||| ||||  | 
Sbjct: 498 atttgatactgcaactggggacttcaccaagtacaatgcgggactgagccacactactcc 557

                                                                       
Query: 121 agatcttactgcttcgttgatgctgaacaacaagggaaacaccctggctgcttcctacta 180
           |||||| |||||  |  || | ||||||||||||||| ||| ||| ||||||||||||||
Sbjct: 558 agatctcactgcagcactgcttctgaacaacaagggagacagccttgctgcttcctacta 617

                                                                       
Query: 181 ccaccaggtgcagc-tcaccactgctgtgggagcagagatcgctcacagcttctcgagca 239
           |||| ||||| |||   || | |||||| ||||||||| | |||||||||||||||||||
Sbjct: 618 ccacaaggtg-agcaaaacaagtgctgttggagcagagctggctcacagcttctcgagca 676

                                                                       
Query: 240 acgagaacaccatcaccgtggggacgcagcacgagctggaccccctgaccacccttaagg 299
           ||||||||||  ||||| | ||||| ||||| |  |||||    || || ||  | ||||
Sbjct: 677 acgagaacactctcaccttcgggacacagcatgccctggatgaactcactactgtgaagg 736

                                                                       
Query: 300 ggcgctacaacaactttggcatcgcaagtgcgctcatccagcacgcgtggaggcccaagt 359
            ||||| ||||||||||||||| || ||||||||||||||||||| ||  ||||||||||
Sbjct: 737 cgcgcttcaacaactttggcatggccagtgcgctcatccagcacgagttcaggcccaagt 796

                                                                       
Query: 360 ctgtcatcaccttctccaccgaggttgataccaaggccgttgagaagagccccaagttcg 419
           |  || ||||| ||||||| |||||||||||||||||| | || |||||| ||||| | |
Sbjct: 797 cgctcgtcaccatctccactgaggttgataccaaggccatcgacaagagctccaaggttg 856

                      
Query: 420 ggctggccctg 430
           ||||| |||||
Sbjct: 857 ggctgtccctg 867
to top
>dbj|AK071833.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121K13, full
           insert sequence
          Length = 1231

 Score =  228 bits (115), Expect = 2e-56
 Identities = 354/431 (82%), Gaps = 2/431 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tcttgttaacatttctggtgtaattgggactaaggctcttgcttttggtcttgcagttgc 60
           |||||||| | ||||||||||  |||| |||  |||| ||||| |||||  ||  |||||
Sbjct: 482 tcttgttagcttttctggtgtgtttggaactggggcttttgctgttggtactgatgttgc 541

                                                                       
Query: 61  atttgatactgcctctggggacttcaccaagtacaatgctggaatgagccatactaacca 120
           ||||||||||||  ||||||||||||||||||||||||| ||| ||||||| ||||  | 
Sbjct: 542 atttgatactgcaactggggacttcaccaagtacaatgcgggactgagccacactactcc 601

                                                                       
Query: 121 agatcttactgcttcgttgatgctgaacaacaagggaaacaccctggctgcttcctacta 180
           |||||| |||||  |  || | ||||||||||||||| ||| ||| ||||||||||||||
Sbjct: 602 agatctcactgcagcactgcttctgaacaacaagggagacagccttgctgcttcctacta 661

                                                                       
Query: 181 ccaccaggtgcagc-tcaccactgctgtgggagcagagatcgctcacagcttctcgagca 239
           |||| ||||| |||   || | |||||| ||||||||| | |||||||||||||||||||
Sbjct: 662 ccacaaggtg-agcaaaacaagtgctgttggagcagagctggctcacagcttctcgagca 720

                                                                       
Query: 240 acgagaacaccatcaccgtggggacgcagcacgagctggaccccctgaccacccttaagg 299
           ||||||||||  ||||| | ||||| ||||| |  |||||    || || ||  | ||||
Sbjct: 721 acgagaacactctcaccttcgggacacagcatgccctggatgaactcactactgtgaagg 780

                                                                       
Query: 300 ggcgctacaacaactttggcatcgcaagtgcgctcatccagcacgcgtggaggcccaagt 359
            ||||| ||||||||||||||| || ||||||||||||||||||| ||  ||||||||||
Sbjct: 781 cgcgcttcaacaactttggcatggccagtgcgctcatccagcacgagttcaggcccaagt 840

                                                                       
Query: 360 ctgtcatcaccttctccaccgaggttgataccaaggccgttgagaagagccccaagttcg 419
           |  || ||||| ||||||| |||||||||||||||||| | || |||||| ||||| | |
Sbjct: 841 cgctcgtcaccatctccactgaggttgataccaaggccatcgacaagagctccaaggttg 900

                      
Query: 420 ggctggccctg 430
           ||||| |||||
Sbjct: 901 ggctgtccctg 911
to top
>gb|AC097112.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1741_B01,
             complete sequence
          Length = 147704

 Score =  165 bits (83), Expect = 2e-37
 Identities = 238/287 (82%), Gaps = 2/287 (0%)
 Strand = Plus / Plus

                                                                         
Query: 145   gaacaacaagggaaacaccctggctgcttcctactaccaccaggtgcagctcaccac-tg 203
             ||||||||||||| ||| ||| |||||||||||||||||| ||||| |||  | ||  ||
Sbjct: 68774 gaacaacaagggagacagccttgctgcttcctactaccacaaggtg-agcaaaacaagtg 68832

                                                                         
Query: 204   ctgtgggagcagagatcgctcacagcttctcgagcaacgagaacaccatcaccgtgggga 263
             |||| ||||||||| | |||||||||||||||||||||||||||||  ||||| | ||||
Sbjct: 68833 ctgttggagcagagctggctcacagcttctcgagcaacgagaacactctcaccttcggga 68892

                                                                         
Query: 264   cgcagcacgagctggaccccctgaccacccttaaggggcgctacaacaactttggcatcg 323
             | ||||| |  |||||    || || ||  | |||| ||||| ||||||||||||||| |
Sbjct: 68893 cacagcatgccctggatgaactcactactgtgaaggcgcgcttcaacaactttggcatgg 68952

                                                                         
Query: 324   caagtgcgctcatccagcacgcgtggaggcccaagtctgtcatcaccttctccaccgagg 383
             | ||||||||||||||||||| ||  |||||||||||  || ||||| ||||||| ||||
Sbjct: 68953 ccagtgcgctcatccagcacgagttcaggcccaagtcgctcgtcaccatctccactgagg 69012

                                                            
Query: 384   ttgataccaaggccgttgagaagagccccaagttcgggctggccctg 430
             |||||||||||||| | || |||||| ||||| | |||||| |||||
Sbjct: 69013 ttgataccaaggccatcgacaagagctccaaggttgggctgtccctg 69059



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 98/116 (84%)
 Strand = Plus / Plus

                                                                         
Query: 1     tcttgttaacatttctggtgtaattgggactaaggctcttgcttttggtcttgcagttgc 60
             |||||||| | ||||||||||  |||| |||  |||| ||||| |||||  ||  |||||
Sbjct: 68243 tcttgttagcttttctggtgtgtttggaactggggcttttgctgttggtactgatgttgc 68302

                                                                     
Query: 61    atttgatactgcctctggggacttcaccaagtacaatgctggaatgagccatacta 116
             ||||||||||||  ||||||||||||||||||||||||| ||| ||||||| ||||
Sbjct: 68303 atttgatactgcaactggggacttcaccaagtacaatgcgggactgagccacacta 68358
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  165 bits (83), Expect = 2e-37
 Identities = 238/287 (82%), Gaps = 2/287 (0%)
 Strand = Plus / Plus

                                                                            
Query: 145      gaacaacaagggaaacaccctggctgcttcctactaccaccaggtgcagctcaccac-tg 203
                ||||||||||||| ||| ||| |||||||||||||||||| ||||| |||  | ||  ||
Sbjct: 26424083 gaacaacaagggagacagccttgctgcttcctactaccacaaggtg-agcaaaacaagtg 26424141

                                                                            
Query: 204      ctgtgggagcagagatcgctcacagcttctcgagcaacgagaacaccatcaccgtgggga 263
                |||| ||||||||| | |||||||||||||||||||||||||||||  ||||| | ||||
Sbjct: 26424142 ctgttggagcagagctggctcacagcttctcgagcaacgagaacactctcaccttcggga 26424201

                                                                            
Query: 264      cgcagcacgagctggaccccctgaccacccttaaggggcgctacaacaactttggcatcg 323
                | ||||| |  |||||    || || ||  | |||| ||||| ||||||||||||||| |
Sbjct: 26424202 cacagcatgccctggatgaactcactactgtgaaggcgcgcttcaacaactttggcatgg 26424261

                                                                            
Query: 324      caagtgcgctcatccagcacgcgtggaggcccaagtctgtcatcaccttctccaccgagg 383
                | ||||||||||||||||||| ||  |||||||||||  || ||||| ||||||| ||||
Sbjct: 26424262 ccagtgcgctcatccagcacgagttcaggcccaagtcgctcgtcaccatctccactgagg 26424321

                                                               
Query: 384      ttgataccaaggccgttgagaagagccccaagttcgggctggccctg 430
                |||||||||||||| | || |||||| ||||| | |||||| |||||
Sbjct: 26424322 ttgataccaaggccatcgacaagagctccaaggttgggctgtccctg 26424368



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 98/116 (84%)
 Strand = Plus / Plus

                                                                            
Query: 1        tcttgttaacatttctggtgtaattgggactaaggctcttgcttttggtcttgcagttgc 60
                |||||||| | ||||||||||  |||| |||  |||| ||||| |||||  ||  |||||
Sbjct: 26423552 tcttgttagcttttctggtgtgtttggaactggggcttttgctgttggtactgatgttgc 26423611

                                                                        
Query: 61       atttgatactgcctctggggacttcaccaagtacaatgctggaatgagccatacta 116
                ||||||||||||  ||||||||||||||||||||||||| ||| ||||||| ||||
Sbjct: 26423612 atttgatactgcaactggggacttcaccaagtacaatgcgggactgagccacacta 26423667



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                              
Query: 145      gaacaacaagggaaacaccctggctgcttcctactaccaccaggtg 190
                ||||||||||||| ||| ||| |||||||||||||||||| |||||
Sbjct: 25619625 gaacaacaagggagacagccttgctgcttcctactaccacaaggtg 25619670



 Score = 48.1 bits (24), Expect = 0.033
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                            
Query: 56       gttgcatttgatactgcctctggggacttcaccaagtacaatgc 99
                |||||||||||||||||   |||  |||||||||||||||||||
Sbjct: 20516210 gttgcatttgatactgcgagtggaaacttcaccaagtacaatgc 20516167
to top
>gb|AF178952.1|AF178952 Zea mays voltage-dependent anion channel protein 2 (vdac2) mRNA,
           complete cds; nuclear gene for mitochondrial product
          Length = 1129

 Score =  123 bits (62), Expect = 7e-25
 Identities = 155/186 (83%)
 Strand = Plus / Plus

                                                                       
Query: 224 cacagcttctcgagcaacgagaacaccatcaccgtggggacgcagcacgagctggacccc 283
           ||||||||||||| ||||| ||||||||||||| | ||||||||||| |  |||||||| 
Sbjct: 696 cacagcttctcgaccaacgggaacaccatcacctttgggacgcagcatgccctggaccct 755

                                                                       
Query: 284 ctgaccacccttaaggggcgctacaacaactttggcatcgcaagtgcgctcatccagcac 343
           ||||||||  | ||||  |||| ||||||||  ||||| |||||||| || ||||| |||
Sbjct: 756 ctgaccactgtgaaggcacgcttcaacaactacggcatggcaagtgcactgatccaacac 815

                                                                       
Query: 344 gcgtggaggcccaagtctgtcatcaccttctccaccgaggttgataccaaggccgttgag 403
           | |||||||||||||||  |  ||||| ||||||| ||||| || ||||||||| | |||
Sbjct: 816 gagtggaggcccaagtcactggtcaccatctccacggaggtggacaccaaggccatcgag 875

                 
Query: 404 aagagc 409
           ||||||
Sbjct: 876 aagagc 881



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 89/107 (83%)
 Strand = Plus / Plus

                                                                       
Query: 3   ttgttaacatttctggtgtaattgggactaaggctcttgcttttggtcttgcagttgcat 62
           |||||||| ||||||||||| | || ||||| ||| ||||| ||||   ||  | |||||
Sbjct: 475 ttgttaacctttctggtgtattcggaactaaagctattgctgttggcgctgatgctgcat 534

                                                          
Query: 63  ttgatactgcctctggggacttcaccaagtacaatgctggaatgagc 109
           |||||||| | ||||||||||| ||||| |||||||||||| |||||
Sbjct: 535 ttgatacttcttctggggacttaaccaaatacaatgctggactgagc 581
to top
>gb|AY104198.1| Zea mays PCO099812 mRNA sequence
          Length = 1156

 Score =  123 bits (62), Expect = 7e-25
 Identities = 155/186 (83%)
 Strand = Plus / Plus

                                                                       
Query: 224 cacagcttctcgagcaacgagaacaccatcaccgtggggacgcagcacgagctggacccc 283
           ||||||||||||| ||||| ||||||||||||| | ||||||||||| |  |||||||| 
Sbjct: 730 cacagcttctcgaccaacgggaacaccatcacctttgggacgcagcatgccctggaccct 789

                                                                       
Query: 284 ctgaccacccttaaggggcgctacaacaactttggcatcgcaagtgcgctcatccagcac 343
           ||||||||  | ||||  |||| ||||||||  ||||| |||||||| || ||||| |||
Sbjct: 790 ctgaccactgtgaaggcacgcttcaacaactacggcatggcaagtgcactgatccaacac 849

                                                                       
Query: 344 gcgtggaggcccaagtctgtcatcaccttctccaccgaggttgataccaaggccgttgag 403
           | |||||||||||||||  |  ||||| ||||||| ||||| || ||||||||| | |||
Sbjct: 850 gagtggaggcccaagtcactggtcaccatctccacggaggtggacaccaaggccatcgag 909

                 
Query: 404 aagagc 409
           ||||||
Sbjct: 910 aagagc 915



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 89/107 (83%)
 Strand = Plus / Plus

                                                                       
Query: 3   ttgttaacatttctggtgtaattgggactaaggctcttgcttttggtcttgcagttgcat 62
           |||||||| ||||||||||| | || ||||| ||| ||||| ||||   ||  | |||||
Sbjct: 509 ttgttaacctttctggtgtattcggaactaaagctattgctgttggcgctgatgctgcat 568

                                                          
Query: 63  ttgatactgcctctggggacttcaccaagtacaatgctggaatgagc 109
           |||||||| | ||||||||||| ||||| |||||||||||| |||||
Sbjct: 569 ttgatacttcttctggggacttaaccaaatacaatgctggactgagc 615
to top
>ref|NM_191753.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 954

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 140/173 (80%)
 Strand = Plus / Plus

                                                                       
Query: 224 cacagcttctcgagcaacgagaacaccatcaccgtggggacgcagcacgagctggacccc 283
           ||||||||||||| ||| ||||||||| ||| | | |||| ||||||||  |||||||| 
Sbjct: 733 cacagcttctcgaccaaggagaacaccctcagcttcgggatgcagcacgccctggaccct 792

                                                                       
Query: 284 ctgaccacccttaaggggcgctacaacaactttggcatcgcaagtgcgctcatccagcac 343
           || || ||| | |||| |||||||||||||   ||||| |  || || ||||||||||||
Sbjct: 793 ctcactaccgtgaaggcgcgctacaacaaccacggcatggtcagcgccctcatccagcac 852

                                                                
Query: 344 gcgtggaggcccaagtctgtcatcaccttctccaccgaggttgataccaaggc 396
           | |||||| ||||||||| || | ||  ||||| ||||||| || ||||||||
Sbjct: 853 gagtggagacccaagtctttcttaacgctctccgccgaggtcgacaccaaggc 905



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                           
Query: 56  gttgcatttgatactgcctctggggacttcaccaagtacaatgctgga 103
           |||||| |||||||| |  |||||||||||||||||||| ||||||||
Sbjct: 559 gttgcagttgatacttctactggggacttcaccaagtacgatgctgga 606
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 140/173 (80%)
 Strand = Plus / Minus

                                                                            
Query: 224      cacagcttctcgagcaacgagaacaccatcaccgtggggacgcagcacgagctggacccc 283
                ||||||||||||| ||| ||||||||| ||| | | |||| ||||||||  |||||||| 
Sbjct: 29763959 cacagcttctcgaccaaggagaacaccctcagcttcgggatgcagcacgccctggaccct 29763900

                                                                            
Query: 284      ctgaccacccttaaggggcgctacaacaactttggcatcgcaagtgcgctcatccagcac 343
                || || ||| | |||| |||||||||||||   ||||| |  || || ||||||||||||
Sbjct: 29763899 ctcactaccgtgaaggcgcgctacaacaaccacggcatggtcagcgccctcatccagcac 29763840

                                                                     
Query: 344      gcgtggaggcccaagtctgtcatcaccttctccaccgaggttgataccaaggc 396
                | |||||| ||||||||| || | ||  ||||| ||||||| || ||||||||
Sbjct: 29763839 gagtggagacccaagtctttcttaacgctctccgccgaggtcgacaccaaggc 29763787



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                                
Query: 56       gttgcatttgatactgcctctggggacttcaccaagtacaatgctgga 103
                |||||| |||||||| |  |||||||||||||||||||| ||||||||
Sbjct: 29764354 gttgcagttgatacttctactggggacttcaccaagtacgatgctgga 29764307
to top
>dbj|AP003288.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0683B11
          Length = 155955

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 140/173 (80%)
 Strand = Plus / Minus

                                                                        
Query: 224  cacagcttctcgagcaacgagaacaccatcaccgtggggacgcagcacgagctggacccc 283
            ||||||||||||| ||| ||||||||| ||| | | |||| ||||||||  |||||||| 
Sbjct: 8054 cacagcttctcgaccaaggagaacaccctcagcttcgggatgcagcacgccctggaccct 7995

                                                                        
Query: 284  ctgaccacccttaaggggcgctacaacaactttggcatcgcaagtgcgctcatccagcac 343
            || || ||| | |||| |||||||||||||   ||||| |  || || ||||||||||||
Sbjct: 7994 ctcactaccgtgaaggcgcgctacaacaaccacggcatggtcagcgccctcatccagcac 7935

                                                                 
Query: 344  gcgtggaggcccaagtctgtcatcaccttctccaccgaggttgataccaaggc 396
            | |||||| ||||||||| || | ||  ||||| ||||||| || ||||||||
Sbjct: 7934 gagtggagacccaagtctttcttaacgctctccgccgaggtcgacaccaaggc 7882



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                            
Query: 56   gttgcatttgatactgcctctggggacttcaccaagtacaatgctgga 103
            |||||| |||||||| |  |||||||||||||||||||| ||||||||
Sbjct: 8449 gttgcagttgatacttctactggggacttcaccaagtacgatgctgga 8402
to top
>dbj|AP003408.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1131B07
          Length = 109135

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 140/173 (80%)
 Strand = Plus / Minus

                                                                         
Query: 224   cacagcttctcgagcaacgagaacaccatcaccgtggggacgcagcacgagctggacccc 283
             ||||||||||||| ||| ||||||||| ||| | | |||| ||||||||  |||||||| 
Sbjct: 93690 cacagcttctcgaccaaggagaacaccctcagcttcgggatgcagcacgccctggaccct 93631

                                                                         
Query: 284   ctgaccacccttaaggggcgctacaacaactttggcatcgcaagtgcgctcatccagcac 343
             || || ||| | |||| |||||||||||||   ||||| |  || || ||||||||||||
Sbjct: 93630 ctcactaccgtgaaggcgcgctacaacaaccacggcatggtcagcgccctcatccagcac 93571

                                                                  
Query: 344   gcgtggaggcccaagtctgtcatcaccttctccaccgaggttgataccaaggc 396
             | |||||| ||||||||| || | ||  ||||| ||||||| || ||||||||
Sbjct: 93570 gagtggagacccaagtctttcttaacgctctccgccgaggtcgacaccaaggc 93518



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                             
Query: 56    gttgcatttgatactgcctctggggacttcaccaagtacaatgctgga 103
             |||||| |||||||| |  |||||||||||||||||||| ||||||||
Sbjct: 94085 gttgcagttgatacttctactggggacttcaccaagtacgatgctgga 94038
to top
>gb|AC132491.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0599F04,
              complete sequence
          Length = 169073

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                            
Query: 145    gaacaacaagggaaacaccctggctgcttcctactaccaccaggtg 190
              ||||||||||||| ||| ||| |||||||||||||||||| |||||
Sbjct: 136032 gaacaacaagggagacagccttgctgcttcctactaccacaaggtg 136077
to top
>gb|AC130611.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0483D07,
             complete sequence
          Length = 147122

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                           
Query: 145   gaacaacaagggaaacaccctggctgcttcctactaccaccaggtg 190
             ||||||||||||| ||| ||| |||||||||||||||||| |||||
Sbjct: 31994 gaacaacaagggagacagccttgctgcttcctactaccacaaggtg 32039
to top
>gb|BT016491.1| Zea mays clone Contig324 mRNA sequence
          Length = 1330

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                       
Query: 60  catttgatactgcctctggggacttcaccaagtacaatgctgga 103
           |||||||| ||||| ||||| |||||||||| ||||||||||||
Sbjct: 592 catttgattctgccactgggaacttcaccaaatacaatgctgga 635
to top
>gb|AY316739.1| Lotus corniculatus var. japonicus VDAC1.3 mRNA, complete cds
          Length = 1069

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                   
Query: 60  catttgatactgcctctggggacttcaccaagtacaatgc 99
           |||||||||||||||||||  |||| ||||||||||||||
Sbjct: 468 catttgatactgcctctggcaactttaccaagtacaatgc 507
to top
>gb|AF178951.1|AF178951 Zea mays voltage-dependent anion channel protein 1b (vdac1b) mRNA,
           complete cds; nuclear gene for mitochondrial product
          Length = 1175

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                       
Query: 60  catttgatactgcctctggggacttcaccaagtacaatgctgga 103
           |||||||| ||||| ||||| |||||||||| ||||||||||||
Sbjct: 587 catttgattctgccactgggaacttcaccaaatacaatgctgga 630
to top
>ref|XM_450604.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1124

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 224 cacagcttctcgagcaacgagaacaccatcacc 256
           |||||||||||||||||||||||| || |||||
Sbjct: 693 cacagcttctcgagcaacgagaactccctcacc 725
to top
>gb|BT012680.1| Lycopersicon esculentum clone 113526R, mRNA sequence
          Length = 1095

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 43/49 (87%)
 Strand = Plus / Plus

                                                            
Query: 223 tcacagcttctcgagcaacgagaacaccatcaccgtggggacgcagcac 271
           |||||||||||| | ||| ||||||| |||||||||||| || ||||||
Sbjct: 658 tcacagcttctctaccaatgagaacatcatcaccgtgggtactcagcac 706
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                                 
Query: 224      cacagcttctcgagcaacgagaacaccatcacc 256
                |||||||||||||||||||||||| || |||||
Sbjct: 11754735 cacagcttctcgagcaacgagaactccctcacc 11754767
to top
>dbj|AP005508.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0711F01
          Length = 193091

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                               
Query: 224    cacagcttctcgagcaacgagaacaccatcacc 256
              |||||||||||||||||||||||| || |||||
Sbjct: 189369 cacagcttctcgagcaacgagaactccctcacc 189401
to top
>emb|Y18104.1|OSA18104 Oryza sativa mRNA for voltage-dependent anion channel
          Length = 1093

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 224 cacagcttctcgagcaacgagaacaccatcacc 256
           |||||||||||||||||||||||| || |||||
Sbjct: 630 cacagcttctcgagcaacgagaactccctcacc 662
to top
>dbj|AK072129.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013126C04, full
            insert sequence
          Length = 3071

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                             
Query: 224  cacagcttctcgagcaacgagaacaccatcacc 256
            |||||||||||||||||||||||| || |||||
Sbjct: 2640 cacagcttctcgagcaacgagaactccctcacc 2672
to top
>dbj|AK061261.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-C01, full
           insert sequence
          Length = 1125

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 224 cacagcttctcgagcaacgagaacaccatcacc 256
           |||||||||||||||||||||||| || |||||
Sbjct: 693 cacagcttctcgagcaacgagaactccctcacc 725
to top
>dbj|AK060652.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-H05, full
           insert sequence
          Length = 1242

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 224 cacagcttctcgagcaacgagaacaccatcacc 256
           |||||||||||||||||||||||| || |||||
Sbjct: 707 cacagcttctcgagcaacgagaactccctcacc 739
to top
>gb|AC124836.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0092E21, complete sequence
          Length = 132649

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                         
Query: 56    gttgcatttgatactgcctctggggacttcaccaagtacaatgc 99
             |||||||||||||||||   |||  |||||||||||||||||||
Sbjct: 59689 gttgcatttgatactgcgagtggaaacttcaccaagtacaatgc 59646
to top
>gb|AY316737.1| Lotus corniculatus var. japonicus VDAC1.1 mRNA, complete cds
          Length = 1203

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                      
Query: 307 caacaactttggcatcgcaagtgcgctcatccagcacgcgtgg 349
           ||||||||| ||||  |||||||| ||||||||||||| ||||
Sbjct: 772 caacaacttcggcaaggcaagtgctctcatccagcacgagtgg 814
to top
>emb|X74799.1|PAAS4EF P.anserina AS4 gene for translation elongation factor EF-1-alpha
          Length = 2157

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 392  aaggccgttgagaagagccccaagttc 418
            |||||||||||| ||||||||||||||
Sbjct: 1872 aaggccgttgaggagagccccaagttc 1898
to top
>emb|Z25540.1|PSPOR1MR P.sativum pspor1 mRNA encoding porin
          Length = 1149

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 3   ttgttaacatttctggtgtaattgggactaaggctcttgcttttggt 49
           |||| ||| ||||| |||| ||||| ||||| |||||||||||||||
Sbjct: 434 ttgtcaacttttctagtgttattggaactaatgctcttgcttttggt 480
to top
>dbj|AP006116.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT40C04, TM0199,
              complete sequence
          Length = 123325

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                         
Query: 307    caacaactttggcatcgcaagtgcgctcatccagcacgcgtgg 349
              ||||||||| ||||  |||||||| ||||||||||||| ||||
Sbjct: 119589 caacaacttcggcaaggcaagtgctctcatccagcacgagtgg 119547
to top
>dbj|AP004901.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT13M13, TM0051b,
            complete sequence
          Length = 54022

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                       
Query: 307  caacaactttggcatcgcaagtgcgctcatccagcacgcgtgg 349
            ||||||||| ||||  |||||||| ||||||||||||| ||||
Sbjct: 8629 caacaacttcggcaaggcaagtgctctcatccagcacgagtgg 8671
to top
>gb|AC145450.4| Mus musculus strain C57BL/6J clone rp23-430i3, complete sequence
          Length = 208207

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 96   atgctggaatgagccatactaaccaa 121
            |||||||||||| |||||||||||||
Sbjct: 5605 atgctggaatgatccatactaaccaa 5580
to top
>emb|X77733.1|TAVDAC1 T.aestivum VDAC 1 mRNA
          Length = 1159

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                     
Query: 143 ctgaacaacaagggaaacaccctggctgcttcctactaccac 184
           ||||||||||||||| ||| |||| |||| ||||| ||||||
Sbjct: 574 ctgaacaacaagggagacagcctgactgcatcctattaccac 615



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 224 cacagcttctcgagcaacgagaaca 248
           ||||||||||| |||||||||||||
Sbjct: 658 cacagcttctcaagcaacgagaaca 682
to top
>emb|AL732585.8| Mouse DNA sequence from clone RP23-226M2 on chromosome 2, complete
             sequence
          Length = 151891

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 96    atgctggaatgagccatactaaccaa 121
             |||||||||||| |||||||||||||
Sbjct: 91163 atgctggaatgatccatactaaccaa 91138
to top
>gb|AY818398.1| Manihot esculenta glycerophosphodiester phosphodiesterase-like
          protein mRNA, partial cds
          Length = 849

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                   
Query: 45 ttggtcttgcagttgcatttgatac 69
          ||||||||||||||||| |||||||
Sbjct: 73 ttggtcttgcagttgcagttgatac 49
to top
>ref|XM_418162.1| PREDICTED: Gallus gallus similar to type I hair keratin KA31
           (LOC420039), mRNA
          Length = 2583

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 373 ctccaccgaggttgataccaaggcc 397
           ||||||||||| |||||||||||||
Sbjct: 250 ctccaccgaggctgataccaaggcc 226
to top
>gb|BT014102.1| Lycopersicon esculentum clone 133206R, mRNA sequence
          Length = 1133

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                            
Query: 222 ctcacagcttctcgagcaacgagaacaccatcaccgtggggacgcagca 270
           ||||||||||||| ||||| ||||||||  ||||| | ||||| |||||
Sbjct: 683 ctcacagcttctcaagcaatgagaacacactcaccattgggacacagca 731
to top
>emb|X80387.1|STPORIN2 S.tuberosum pPOM36II mRNA for 36kDa porinII
          Length = 1060

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                            
Query: 222 ctcacagcttctcgagcaacgagaacaccatcaccgtggggacgcagca 270
           ||||||||||||| ||||| ||||||||  ||||| | ||||| |||||
Sbjct: 651 ctcacagcttctcaagcaatgagaacacactcaccattgggacacagca 699
to top
>emb|X80386.1|STPORIN1 S.tuberosum pPOM34 mRNA for mitochondrial 34kDa porin
          Length = 1210

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                            
Query: 223 tcacagcttctcgagcaacgagaacaccatcaccgtggggacgcagcac 271
           |||||||||||| | ||| ||||||| ||| |||||||| || ||||||
Sbjct: 659 tcacagcttctccaccaatgagaacatcattaccgtgggtactcagcac 707
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 47       ggtcttgcagttgcatttgat 67
                |||||||||||||||||||||
Sbjct: 19812789 ggtcttgcagttgcatttgat 19812769
to top
>dbj|AP004269.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0048D08
          Length = 145772

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 47     ggtcttgcagttgcatttgat 67
              |||||||||||||||||||||
Sbjct: 144795 ggtcttgcagttgcatttgat 144775
to top
>dbj|AP005320.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0650C03
          Length = 144337

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 47    ggtcttgcagttgcatttgat 67
             |||||||||||||||||||||
Sbjct: 52948 ggtcttgcagttgcatttgat 52928
to top
>gb|AC183761.3| Pan troglodytes BAC clone CH251-710C5 from chromosome 7, complete
              sequence
          Length = 205916

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 461    tgcattaggatgctagcatt 480
              ||||||||||||||||||||
Sbjct: 191975 tgcattaggatgctagcatt 191956
to top
>gb|CP000051.1| Chlamydia trachomatis A/HAR-13, complete genome
          Length = 1044459

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 232    ctcgagcaacgagaacaccatcac 255
              ||||||||||||| ||||||||||
Sbjct: 742975 ctcgagcaacgaggacaccatcac 742998
to top
>gb|AC122855.4| Mus musculus BAC clone RP23-120H20 from chromosome 14, complete
             sequence
          Length = 202424

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 198   ccactgctgtgggagcagag 217
             ||||||||||||||||||||
Sbjct: 36936 ccactgctgtgggagcagag 36917
to top
>gb|AY445665.1| Photorhabdus luminescens putative toxin transporter (mtpB) gene,
            partial cds; and putative toxin transporter (mtpD),
            putative toxin transporter (mtpE), and Mcf2 (mcf2) genes,
            complete cds
          Length = 13732

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 360  ctgtcatcaccttctccaccgagg 383
            |||||||||||||||||| |||||
Sbjct: 1491 ctgtcatcaccttctccagcgagg 1468
to top
>gb|AC125172.4| Mus musculus BAC clone RP24-492I4 from chromosome 14, complete sequence
          Length = 179789

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 198   ccactgctgtgggagcagag 217
             ||||||||||||||||||||
Sbjct: 25928 ccactgctgtgggagcagag 25947
to top
>gb|AC092637.2| Homo sapiens BAC clone RP11-358M3 from 7, complete sequence
          Length = 126643

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 461   tgcattaggatgctagcatt 480
             ||||||||||||||||||||
Sbjct: 88826 tgcattaggatgctagcatt 88845
to top
>emb|AJ616216.2| Takifugu rubripes ifng gene for interferon gamma, exons 1-4
          Length = 3030

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 465  ttaggatgctagcattttggtaccatca 492
            |||| |||||||||| ||||||||||||
Sbjct: 1706 ttagcatgctagcatgttggtaccatca 1679
to top
>emb|X80388.1|STPORIN3 S.tuberosum pPOM36I mRNA for 36kDA porinI
          Length = 1030

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 222 ctcacagcttctcgagcaacgagaacac 249
           ||||||||||||| ||||| ||||||||
Sbjct: 611 ctcacagcttctcaagcaatgagaacac 638
to top
>emb|BX842670.5| Zebrafish DNA sequence from clone DKEY-195A13 in linkage group 20,
             complete sequence
          Length = 177539

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 2     cttgttaacatttctggtgtaatt 25
             ||||||||||||| ||||||||||
Sbjct: 56755 cttgttaacatttgtggtgtaatt 56778
to top
>gb|AE001273.1| Chlamydia trachomatis D/UW-3/CX, complete genome
          Length = 1042519

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 232    ctcgagcaacgagaacaccatcac 255
              ||||||||||||| ||||||||||
Sbjct: 740249 ctcgagcaacgaggacaccatcac 740272
to top
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 328     tgcgctcatccagcacgcgt 347
               ||||||||||||||||||||
Sbjct: 4144701 tgcgctcatccagcacgcgt 4144682
to top
>gb|AC154461.2| Mus musculus BAC clone RP24-163I13 from 14, complete sequence
          Length = 202273

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 198   ccactgctgtgggagcagag 217
             ||||||||||||||||||||
Sbjct: 12704 ccactgctgtgggagcagag 12685
to top
>gb|AY106124.1| Zea mays PCO123686 mRNA sequence
          Length = 926

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 161 accctggctgcttcctactaccac 184
           ||||||||||| ||||||||||||
Sbjct: 669 accctggctgcgtcctactaccac 692
to top
>emb|CT025626.11| Mouse DNA sequence from clone RP24-141G14 on chromosome 14, complete
              sequence
          Length = 201441

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 198    ccactgctgtgggagcagag 217
              ||||||||||||||||||||
Sbjct: 181856 ccactgctgtgggagcagag 181837
to top
>gb|AC147719.1| Gallus gallus BAC clone CH261-22J12 from chromosome unknown, complete
             sequence
          Length = 192198

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 2     cttgttaacatttctggtgt 21
             ||||||||||||||||||||
Sbjct: 58936 cttgttaacatttctggtgt 58917


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,386,666
Number of Sequences: 3902068
Number of extensions: 4386666
Number of successful extensions: 77090
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 76827
Number of HSP's gapped (non-prelim): 253
length of query: 589
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 566
effective length of database: 17,143,297,704
effective search space: 9703106500464
effective search space used: 9703106500464
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top