ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags12e24
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009621.1| Triticum aestivum clone wre1n.pk0134.h7:fis, full... 539 e-150
2gb|AY135021.1| Triticum aestivum GTP-binding protein mRNA, compl... 486 e-134
3gb|AY105761.1| Zea mays PCO136937 mRNA sequence 321 7e-85
4ref|XM_480550.1| Oryza sativa (japonica cultivar-group), mRNA 319 3e-84
5ref|XM_507572.1| PREDICTED Oryza sativa (japonica cultivar-group... 319 3e-84
6ref|XM_507162.2| PREDICTED Oryza sativa (japonica cultivar-group... 319 3e-84
7dbj|AK121741.1| Oryza sativa (japonica cultivar-group) cDNA clon... 319 3e-84
8dbj|AK098917.1| Oryza sativa (japonica cultivar-group) cDNA clon... 319 3e-84
9dbj|AK062256.1| Oryza sativa (japonica cultivar-group) cDNA clon... 319 3e-84
10dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 123 3e-25
11dbj|AP005416.3| Oryza sativa (japonica cultivar-group) genomic D... 123 3e-25
12ref|NM_102795.2| Arabidopsis thaliana GTP binding AT1G30580 mRNA... 109 5e-21
13gb|AY085845.1| Arabidopsis thaliana clone 18981 mRNA, complete s... 101 1e-18
14gb|AF108896.1|AF108896 Capsicum annuum GTP-binding protein mRNA,... 101 1e-18
15ref|XM_641841.1| Dictyostelium discoideum hypothetical protein (... 58 2e-05
16ref|NM_001019834.1| Schizosaccharomyces pombe 972h- hypothetical... 56 7e-05
17emb|Z98978.1|SPAC27E2 S.pombe chromosome I cosmid c27E2 56 7e-05
18gb|AC007060.3|T5I8 Arabidopsis thaliana chromosome 1 BAC T5I8 se... 52 0.001
19gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, c... 46 0.064
20gb|AE017263.1| Mesoplasma florum L1 complete genome 46 0.064
21gb|BC051155.1| Danio rerio zgc:55768, mRNA (cDNA clone MGC:55768... 46 0.064
22ref|XM_843099.1| Leishmania major strain Friedlin hypothetical p... 46 0.064
23ref|NM_001031254.1| Gallus gallus GTP-binding protein PTD004 (PT... 46 0.064
24emb|BX063853.1|CNS09LFL Single read from an extremity of a full-... 46 0.064
25emb|BX060119.1|CNS09IJV Single read from an extremity of a full-... 46 0.064
26emb|BX054899.1|CNS09EIV Single read from an extremity of a full-... 46 0.064
27emb|BX046530.1|CNS0982E Single read from an extremity of a full-... 46 0.064
28emb|BX043324.1|CNS095LC Single read from an extremity of a full-... 46 0.064
29emb|BX030841.1|CNS08VYL Single read from an extremity of a full-... 46 0.064
30emb|BX024837.1|CNS08RBT Single read from an extremity of a full-... 46 0.064
31emb|AJ719559.1| Gallus gallus mRNA for hypothetical protein, clo... 46 0.064
32ref|NM_214700.1| Danio rerio zgc:55768 (zgc:55768), mRNA 46 0.064
33ref|XM_697624.1| PREDICTED: Danio rerio hypothetical protein LOC... 46 0.064
34dbj|AK089515.1| Mus musculus B6-derived CD11 +ve dendritic cells... 46 0.064
35dbj|AK089447.1| Mus musculus B6-derived CD11 +ve dendritic cells... 46 0.064
36ref|XM_311198.2| Anopheles gambiae str. PEST ENSANGP00000019083 ... 46 0.064
37gb|BC067579.1| Danio rerio zgc:55768, mRNA (cDNA clone MGC:85691... 46 0.064
38gb|AC159470.17| Mus musculus 10 BAC RP24-462C5 (Roswell Park Can... 46 0.064
39gb|AC167231.12| Mus musculus BAC RP23-416P12 (Roswell Park Canc... 46 0.064
40gb|AE006051.1| Pasteurella multocida subsp. multocida str. Pm70 ... 44 0.25
41gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome 44 0.25
42emb|CR378672.1| Photobacterium profundum SS9; segment 10/12 44 0.25
43gb|AF110663.1|AF110663 Leishmania major clone LmV9-A1 putative G... 44 0.25
44emb|AL833799.8| Mouse DNA sequence from clone RP23-26L11 on chro... 44 0.25
45gb|AY433192.1| Aedes aegypti ASAP ID: 35469 conserved unknown mR... 42 1.0
46gb|DQ443128.1| Bombyx mori GTP binding protein mRNA, complete cds 42 1.0
47ref|XM_663289.1| Cryptosporidium hominis TU502 GTP-binding prote... 42 1.0
48ref|XM_792116.1| PREDICTED: Strongylocentrotus purpuratus simila... 42 1.0
49dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, co... 42 1.0
50ref|XM_628099.1| Cryptosporidium parvum Iowa II yyaF/YCHF TRANSF... 42 1.0
51gb|AC055766.31|AC055766 Mus musculus X BAC RP23-149C7 (Roswell P... 42 1.0
52gb|AC012001.6| Homo sapiens BAC clone RP11-465G21 from 2, comple... 42 1.0
53gb|CP000084.1| Candidatus Pelagibacter ubique HTCC1062, complete... 42 1.0
54gb|AE017321.1| Wolbachia endosymbiont strain TRS of Brugia malay... 42 1.0
55gb|J02677.1|HEAMTS H.haemolyticus DNA methylase gene, complete cds 42 1.0
56gb|AC123684.8| Mus musculus chromosome 3, clone RP23-297F14, com... 40 4.0
57gb|AC121873.3| Mus musculus BAC clone RP24-123L3 from chromosome... 40 4.0
58gb|AC126608.20| Mus musculus chromosome 19, clone RP24-166L20, c... 40 4.0
59emb|BX897727.17| Zebrafish DNA sequence from clone DKEY-90A13 in... 40 4.0
60gb|AC098715.3| Mus musculus BAC clone RP23-2D23 from 7, complete... 40 4.0
61emb|X64275.1|SV41RNA Simian parainfluenza virus 41 NP, P-V, M, F... 40 4.0
62gb|DQ397623.1| Cenarchaeum symbiosum clone C15D07, complete sequ... 40 4.0
63gb|AC023395.8| Homo sapiens chromosome 18, clone RP11-484N16, co... 40 4.0
64gb|AF310989.1| Influenza A virus (A/Red Kont/Delaware/254/94(H8N... 40 4.0
65gb|S56065.1| nucleoprotein (NP) [simian virus 41, mRNA, 1898 nt] 40 4.0
66emb|BX322666.10| Zebrafish DNA sequence from clone CH211-199D3 i... 40 4.0
67gb|AC119043.4| Homo sapiens 3 BAC RP11-582I9 (Roswell Park Cance... 40 4.0
68emb|AL807769.8| Zebrafish DNA sequence from clone CH211-197G8, c... 40 4.0
69gb|AY653733.1| Acanthamoeba polyphaga mimivirus, complete genome 40 4.0
70emb|AL714027.8| Mouse DNA sequence from clone RP23-96E23 on chro... 40 4.0 
>gb|BT009621.1| Triticum aestivum clone wre1n.pk0134.h7:fis, full insert mRNA
            sequence
          Length = 1608

 Score =  539 bits (272), Expect = e-150
 Identities = 295/303 (97%)
 Strand = Plus / Plus

                                                                        
Query: 1    aaaccagacgataagtntgatccccaaaatcatcaagactggttttgcagcaattcatct 60
            |||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 966  aaaccaaacgacaagtttgatccccaaaatcatcaagactggttttgcagcaattcatct 1025

                                                                        
Query: 61   catatacttcttcactgctggtcacggcgaggtgaagtgctggcagatcagacgtcaaag 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1026 catatacttcttcactgctggtcacggcgaggtgaagtgctggcagatcagacgtcaaag 1085

                                                                        
Query: 121  taaagctccgcaagctgctggtgcaattcacactgattttgaaagaggcttcatatgtgc 180
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1086 taaagctccgcaagctgctggtgcaattcatactgattttgaaagaggcttcatatgtgc 1145

                                                                        
Query: 181  cgaggtaatgaagtttgaagatctaaaagagctgggcagtgaatctgctgtaaaggctgc 240
             |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1146 tgaggtaatgaagtttgaagatctaaaagagctgggcagtgaatctgctgtgaaggctgc 1205

                                                                        
Query: 241  tgggaagtacaggcaggaagggaaaacatacgtggtgcaggatggagacatcatcttctt 300
            |||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct: 1206 tgggaagtacaggcaggaagggaagacgtacgtggtgcaggatggagacatcatcttctt 1265

               
Query: 301  caa 303
            |||
Sbjct: 1266 caa 1268
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>gb|AY135021.1| Triticum aestivum GTP-binding protein mRNA, complete cds
          Length = 1143

 Score =  486 bits (245), Expect = e-134
 Identities = 281/292 (96%), Gaps = 1/292 (0%)
 Strand = Plus / Plus

                                                                       
Query: 13  aagtntgatccccaaaatcatcaagactggttttgcagcaattcatctcatatacttctt 72
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 aagtttgatccccaaaatcatcaagactggttttgcagcaattcatctcatatacttctt 623

                                                                       
Query: 73  cactgctggtcacggcgaggtgaagtgctggcagatcagacgtcaaagtaaagctccgca 132
           ||| |||||||||| |||||||||||||||||||||||||||||||  ||||||||||||
Sbjct: 624 cacagctggtcacgacgaggtgaagtgctggcagatcagacgtcaatctaaagctccgca 683

                                                                       
Query: 133 agctgctggtgcaattcacactgattttgaaagaggcttcatatgtgccgaggtaatgaa 192
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 684 agctgctggtgcaattcacactgattttgaaagaggcttcatatgtgctgaggtaatgaa 743

                                                                       
Query: 193 gtttgaagatctaaaagagctgggcagtgaatctgctgtaaaggctgctgggaagtacag 252
           ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 744 gtttgaagatctaaaagagctgggcagcgaatctgctgtcaaggctgctgggaagtacag 803

                                                               
Query: 253 g-caggaagggaaaacatacgtggtgcaggatggagacatcatcttcttcaa 303
           | ||||||||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 804 gccaggaagggaagacgtacgtggtgcaggatggagacatcatcttcttcaa 855
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>gb|AY105761.1| Zea mays PCO136937 mRNA sequence
          Length = 1586

 Score =  321 bits (162), Expect = 7e-85
 Identities = 255/286 (89%)
 Strand = Plus / Plus

                                                                        
Query: 18   tgatccccaaaatcatcaagactggttttgcagcaattcatctcatatacttcttcactg 77
            ||||||| ||||| ||||||||||||||||||||||||||||| |||||||| |||||||
Sbjct: 1009 tgatcccaaaaattatcaagactggttttgcagcaattcatctgatatactttttcactg 1068

                                                                        
Query: 78   ctggtcacggcgaggtgaagtgctggcagatcagacgtcaaagtaaagctccgcaagctg 137
            ||||||  |  ||||| || || |||||||||||||| || | ||||||||| |||||||
Sbjct: 1069 ctggtcctgatgaggtaaaatgttggcagatcagacgccagactaaagctcctcaagctg 1128

                                                                        
Query: 138  ctggtgcaattcacactgattttgaaagaggcttcatatgtgccgaggtaatgaagtttg 197
            |||||||||||||||||||||||||||| || |||||||| || ||||||||||||||||
Sbjct: 1129 ctggtgcaattcacactgattttgaaaggggtttcatatgcgctgaggtaatgaagtttg 1188

                                                                        
Query: 198  aagatctaaaagagctgggcagtgaatctgctgtaaaggctgctgggaagtacaggcagg 257
            ||||||| ||||| |||||||||||||||||||||||||||||||| || |||| |||||
Sbjct: 1189 aagatctgaaagaactgggcagtgaatctgctgtaaaggctgctggaaaatacaagcagg 1248

                                                          
Query: 258  aagggaaaacatacgtggtgcaggatggagacatcatcttcttcaa 303
            | |||||||| || ||||| ||||| || ||||||||||| |||||
Sbjct: 1249 aggggaaaacctatgtggtccaggacggggacatcatctttttcaa 1294
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>ref|XM_480550.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1533

 Score =  319 bits (161), Expect = 3e-84
 Identities = 256/288 (88%)
 Strand = Plus / Plus

                                                                        
Query: 13   aagtntgatccccaaaatcatcaagactggttttgcagcaattcatctcatatacttctt 72
            |||| ||||||| ||||| ||||||||||||||||||||||| ||||| |||||||| ||
Sbjct: 953  aagtgtgatcccaaaaattatcaagactggttttgcagcaatccatcttatatacttttt 1012

                                                                        
Query: 73   cactgctggtcacggcgaggtgaagtgctggcagatcagacgtcaaagtaaagctccgca 132
            ||||||||| |  | |||||| ||||| ||||||||||||||||||| |||||| || ||
Sbjct: 1013 cactgctggccctgacgaggtaaagtgttggcagatcagacgtcaaactaaagcacctca 1072

                                                                        
Query: 133  agctgctggtgcaattcacactgattttgaaagaggcttcatatgtgccgaggtaatgaa 192
            |||||||||| ||||||||||||||||||| |||||||||||||| || |||||||||||
Sbjct: 1073 agctgctggtacaattcacactgattttgagagaggcttcatatgcgctgaggtaatgaa 1132

                                                                        
Query: 193  gtttgaagatctaaaagagctgggcagtgaatctgctgtaaaggctgctgggaagtacag 252
            ||| || ||||||||||| ||||| |||||||||||||| ||||||||||| || |||||
Sbjct: 1133 gttcgacgatctaaaagaactgggtagtgaatctgctgtgaaggctgctggaaaatacag 1192

                                                            
Query: 253  gcaggaagggaaaacatacgtggtgcaggatggagacatcatcttctt 300
            |||||||||||| || |||||||| ||||| || || |||||||||||
Sbjct: 1193 gcaggaagggaagacctacgtggtacaggacggggatatcatcttctt 1240
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>ref|XM_507572.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBb0094P23.28
            mRNA
          Length = 1594

 Score =  319 bits (161), Expect = 3e-84
 Identities = 256/288 (88%)
 Strand = Plus / Plus

                                                                        
Query: 13   aagtntgatccccaaaatcatcaagactggttttgcagcaattcatctcatatacttctt 72
            |||| ||||||| ||||| ||||||||||||||||||||||| ||||| |||||||| ||
Sbjct: 970  aagtgtgatcccaaaaattatcaagactggttttgcagcaatccatcttatatacttttt 1029

                                                                        
Query: 73   cactgctggtcacggcgaggtgaagtgctggcagatcagacgtcaaagtaaagctccgca 132
            ||||||||| |  | |||||| ||||| ||||||||||||||||||| |||||| || ||
Sbjct: 1030 cactgctggccctgacgaggtaaagtgttggcagatcagacgtcaaactaaagcacctca 1089

                                                                        
Query: 133  agctgctggtgcaattcacactgattttgaaagaggcttcatatgtgccgaggtaatgaa 192
            |||||||||| ||||||||||||||||||| |||||||||||||| || |||||||||||
Sbjct: 1090 agctgctggtacaattcacactgattttgagagaggcttcatatgcgctgaggtaatgaa 1149

                                                                        
Query: 193  gtttgaagatctaaaagagctgggcagtgaatctgctgtaaaggctgctgggaagtacag 252
            ||| || ||||||||||| ||||| |||||||||||||| ||||||||||| || |||||
Sbjct: 1150 gttcgacgatctaaaagaactgggtagtgaatctgctgtgaaggctgctggaaaatacag 1209

                                                            
Query: 253  gcaggaagggaaaacatacgtggtgcaggatggagacatcatcttctt 300
            |||||||||||| || |||||||| ||||| || || |||||||||||
Sbjct: 1210 gcaggaagggaagacctacgtggtacaggacggggatatcatcttctt 1257
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>ref|XM_507162.2| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBb0094P23.28
            mRNA
          Length = 1551

 Score =  319 bits (161), Expect = 3e-84
 Identities = 256/288 (88%)
 Strand = Plus / Plus

                                                                        
Query: 13   aagtntgatccccaaaatcatcaagactggttttgcagcaattcatctcatatacttctt 72
            |||| ||||||| ||||| ||||||||||||||||||||||| ||||| |||||||| ||
Sbjct: 971  aagtgtgatcccaaaaattatcaagactggttttgcagcaatccatcttatatacttttt 1030

                                                                        
Query: 73   cactgctggtcacggcgaggtgaagtgctggcagatcagacgtcaaagtaaagctccgca 132
            ||||||||| |  | |||||| ||||| ||||||||||||||||||| |||||| || ||
Sbjct: 1031 cactgctggccctgacgaggtaaagtgttggcagatcagacgtcaaactaaagcacctca 1090

                                                                        
Query: 133  agctgctggtgcaattcacactgattttgaaagaggcttcatatgtgccgaggtaatgaa 192
            |||||||||| ||||||||||||||||||| |||||||||||||| || |||||||||||
Sbjct: 1091 agctgctggtacaattcacactgattttgagagaggcttcatatgcgctgaggtaatgaa 1150

                                                                        
Query: 193  gtttgaagatctaaaagagctgggcagtgaatctgctgtaaaggctgctgggaagtacag 252
            ||| || ||||||||||| ||||| |||||||||||||| ||||||||||| || |||||
Sbjct: 1151 gttcgacgatctaaaagaactgggtagtgaatctgctgtgaaggctgctggaaaatacag 1210

                                                            
Query: 253  gcaggaagggaaaacatacgtggtgcaggatggagacatcatcttctt 300
            |||||||||||| || |||||||| ||||| || || |||||||||||
Sbjct: 1211 gcaggaagggaagacctacgtggtacaggacggggatatcatcttctt 1258
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>dbj|AK121741.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033085L09, full
            insert sequence
          Length = 1551

 Score =  319 bits (161), Expect = 3e-84
 Identities = 256/288 (88%)
 Strand = Plus / Plus

                                                                        
Query: 13   aagtntgatccccaaaatcatcaagactggttttgcagcaattcatctcatatacttctt 72
            |||| ||||||| ||||| ||||||||||||||||||||||| ||||| |||||||| ||
Sbjct: 971  aagtgtgatcccaaaaattatcaagactggttttgcagcaatccatcttatatacttttt 1030

                                                                        
Query: 73   cactgctggtcacggcgaggtgaagtgctggcagatcagacgtcaaagtaaagctccgca 132
            ||||||||| |  | |||||| ||||| ||||||||||||||||||| |||||| || ||
Sbjct: 1031 cactgctggccctgacgaggtaaagtgttggcagatcagacgtcaaactaaagcacctca 1090

                                                                        
Query: 133  agctgctggtgcaattcacactgattttgaaagaggcttcatatgtgccgaggtaatgaa 192
            |||||||||| ||||||||||||||||||| |||||||||||||| || |||||||||||
Sbjct: 1091 agctgctggtacaattcacactgattttgatagaggcttcatatgcgctgaggtaatgaa 1150

                                                                        
Query: 193  gtttgaagatctaaaagagctgggcagtgaatctgctgtaaaggctgctgggaagtacag 252
            ||| || ||||||||||| ||||| |||||||||||||| ||||||||||| || |||||
Sbjct: 1151 gttcgacgatctaaaagaactgggtagtgaatctgctgtgaaggctgctggaaaatacag 1210

                                                            
Query: 253  gcaggaagggaaaacatacgtggtgcaggatggagacatcatcttctt 300
            |||||||||||| || |||||||| ||||| || || |||||||||||
Sbjct: 1211 gcaggaagggaagacctacgtggtacaggacggggatatcatcttctt 1258
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>dbj|AK098917.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002L20, full
            insert sequence
          Length = 1533

 Score =  319 bits (161), Expect = 3e-84
 Identities = 256/288 (88%)
 Strand = Plus / Plus

                                                                        
Query: 13   aagtntgatccccaaaatcatcaagactggttttgcagcaattcatctcatatacttctt 72
            |||| ||||||| ||||| ||||||||||||||||||||||| ||||| |||||||| ||
Sbjct: 953  aagtgtgatcccaaaaattatcaagactggttttgcagcaatccatcttatatacttttt 1012

                                                                        
Query: 73   cactgctggtcacggcgaggtgaagtgctggcagatcagacgtcaaagtaaagctccgca 132
            ||||||||| |  | |||||| ||||| ||||||||||||||||||| |||||| || ||
Sbjct: 1013 cactgctggccctgacgaggtaaagtgttggcagatcagacgtcaaactaaagcacctca 1072

                                                                        
Query: 133  agctgctggtgcaattcacactgattttgaaagaggcttcatatgtgccgaggtaatgaa 192
            |||||||||| ||||||||||||||||||| |||||||||||||| || |||||||||||
Sbjct: 1073 agctgctggtacaattcacactgattttgagagaggcttcatatgcgctgaggtaatgaa 1132

                                                                        
Query: 193  gtttgaagatctaaaagagctgggcagtgaatctgctgtaaaggctgctgggaagtacag 252
            ||| || ||||||||||| ||||| |||||||||||||| ||||||||||| || |||||
Sbjct: 1133 gttcgacgatctaaaagaactgggtagtgaatctgctgtgaaggctgctggaaaatacag 1192

                                                            
Query: 253  gcaggaagggaaaacatacgtggtgcaggatggagacatcatcttctt 300
            |||||||||||| || |||||||| ||||| || || |||||||||||
Sbjct: 1193 gcaggaagggaagacctacgtggtacaggacggggatatcatcttctt 1240
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>dbj|AK062256.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-G08, full
            insert sequence
          Length = 1599

 Score =  319 bits (161), Expect = 3e-84
 Identities = 256/288 (88%)
 Strand = Plus / Plus

                                                                        
Query: 13   aagtntgatccccaaaatcatcaagactggttttgcagcaattcatctcatatacttctt 72
            |||| ||||||| ||||| ||||||||||||||||||||||| ||||| |||||||| ||
Sbjct: 975  aagtgtgatcccaaaaattatcaagactggttttgcagcaatccatcttatatacttttt 1034

                                                                        
Query: 73   cactgctggtcacggcgaggtgaagtgctggcagatcagacgtcaaagtaaagctccgca 132
            ||||||||| |  | |||||| ||||| ||||||||||||||||||| |||||| || ||
Sbjct: 1035 cactgctggccctgacgaggtaaagtgttggcagatcagacgtcaaactaaagcacctca 1094

                                                                        
Query: 133  agctgctggtgcaattcacactgattttgaaagaggcttcatatgtgccgaggtaatgaa 192
            |||||||||| ||||||||||||||||||| |||||||||||||| || |||||||||||
Sbjct: 1095 agctgctggtacaattcacactgattttgagagaggcttcatatgcgctgaggtaatgaa 1154

                                                                        
Query: 193  gtttgaagatctaaaagagctgggcagtgaatctgctgtaaaggctgctgggaagtacag 252
            ||| || ||||||||||| ||||| |||||||||||||| ||||||||||| || |||||
Sbjct: 1155 gttcgacgatctaaaagaactgggtagtgaatctgctgtgaaggctgctggaaaatacag 1214

                                                            
Query: 253  gcaggaagggaaaacatacgtggtgcaggatggagacatcatcttctt 300
            |||||||||||| || |||||||| ||||| || || |||||||||||
Sbjct: 1215 gcaggaagggaagacctacgtggtacaggacggggatatcatcttctt 1262
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score =  123 bits (62), Expect = 3e-25
 Identities = 89/98 (90%)
 Strand = Plus / Plus

                                                                           
Query: 90      aggtgaagtgctggcagatcagacgtcaaagtaaagctccgcaagctgctggtgcaattc 149
               |||| ||||| ||||||||||||||||||| |||||| || |||||||||||| ||||||
Sbjct: 5744500 aggtaaagtgttggcagatcagacgtcaaactaaagcacctcaagctgctggtacaattc 5744559

                                                     
Query: 150     acactgattttgaaagaggcttcatatgtgccgaggta 187
               ||||||||||||| |||||||||||||| || ||||||
Sbjct: 5744560 acactgattttgagagaggcttcatatgcgctgaggta 5744597



 Score = 89.7 bits (45), Expect = 5e-15
 Identities = 62/68 (91%)
 Strand = Plus / Plus

                                                                           
Query: 14      agtntgatccccaaaatcatcaagactggttttgcagcaattcatctcatatacttcttc 73
               ||| ||||||| ||||| ||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 5743868 agtgtgatcccaaaaattatcaagactggttttgcagcaatccatcttatatactttttc 5743927

                       
Query: 74      actgctgg 81
               ||||||||
Sbjct: 5743928 actgctgg 5743935



 Score = 69.9 bits (35), Expect = 4e-09
 Identities = 59/67 (88%)
 Strand = Plus / Plus

                                                                           
Query: 234     aggctgctgggaagtacaggcaggaagggaaaacatacgtggtgcaggatggagacatca 293
               |||||||||| || ||||||||||||||||| || |||||||| ||||| || || ||||
Sbjct: 5745082 aggctgctggaaaatacaggcaggaagggaagacctacgtggtacaggacggggatatca 5745141

                      
Query: 294     tcttctt 300
               |||||||
Sbjct: 5745142 tcttctt 5745148



 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 49/54 (90%)
 Strand = Plus / Plus

                                                                     
Query: 183     aggtaatgaagtttgaagatctaaaagagctgggcagtgaatctgctgtaaagg 236
               ||||||||||||| || ||||||||||| ||||| |||||||||||||| ||||
Sbjct: 5744942 aggtaatgaagttcgacgatctaaaagaactgggtagtgaatctgctgtgaagg 5744995
to top
>dbj|AP005416.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBb0094P23
          Length = 149341

 Score =  123 bits (62), Expect = 3e-25
 Identities = 89/98 (90%)
 Strand = Plus / Plus

                                                                         
Query: 90    aggtgaagtgctggcagatcagacgtcaaagtaaagctccgcaagctgctggtgcaattc 149
             |||| ||||| ||||||||||||||||||| |||||| || |||||||||||| ||||||
Sbjct: 99125 aggtaaagtgttggcagatcagacgtcaaactaaagcacctcaagctgctggtacaattc 99184

                                                   
Query: 150   acactgattttgaaagaggcttcatatgtgccgaggta 187
             ||||||||||||| |||||||||||||| || ||||||
Sbjct: 99185 acactgattttgagagaggcttcatatgcgctgaggta 99222



 Score = 89.7 bits (45), Expect = 5e-15
 Identities = 62/68 (91%)
 Strand = Plus / Plus

                                                                         
Query: 14    agtntgatccccaaaatcatcaagactggttttgcagcaattcatctcatatacttcttc 73
             ||| ||||||| ||||| ||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 98493 agtgtgatcccaaaaattatcaagactggttttgcagcaatccatcttatatactttttc 98552

                     
Query: 74    actgctgg 81
             ||||||||
Sbjct: 98553 actgctgg 98560



 Score = 69.9 bits (35), Expect = 4e-09
 Identities = 59/67 (88%)
 Strand = Plus / Plus

                                                                         
Query: 234   aggctgctgggaagtacaggcaggaagggaaaacatacgtggtgcaggatggagacatca 293
             |||||||||| || ||||||||||||||||| || |||||||| ||||| || || ||||
Sbjct: 99707 aggctgctggaaaatacaggcaggaagggaagacctacgtggtacaggacggggatatca 99766

                    
Query: 294   tcttctt 300
             |||||||
Sbjct: 99767 tcttctt 99773



 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 49/54 (90%)
 Strand = Plus / Plus

                                                                   
Query: 183   aggtaatgaagtttgaagatctaaaagagctgggcagtgaatctgctgtaaagg 236
             ||||||||||||| || ||||||||||| ||||| |||||||||||||| ||||
Sbjct: 99567 aggtaatgaagttcgacgatctaaaagaactgggtagtgaatctgctgtgaagg 99620
to top
>ref|NM_102795.2| Arabidopsis thaliana GTP binding AT1G30580 mRNA, complete cds
          Length = 1549

 Score =  109 bits (55), Expect = 5e-21
 Identities = 220/275 (80%)
 Strand = Plus / Plus

                                                                        
Query: 29   atcatcaagactggttttgcagcaattcatctcatatacttcttcactgctggtcacggc 88
            |||||||| ||||| ||| |||||||| | |||||||||||||| || || || |  |  
Sbjct: 964  atcatcaaaactggattttcagcaattaacctcatatacttctttacagcagggcctgat 1023

                                                                        
Query: 89   gaggtgaagtgctggcagatcagacgtcaaagtaaagctccgcaagctgctggtgcaatt 148
            ||||||||||||||||| || ||||| ||    || ||||| |||||||| || || |||
Sbjct: 1024 gaggtgaagtgctggcaaataagacggcagtcaaaggctcctcaagctgcaggggccatt 1083

                                                                        
Query: 149  cacactgattttgaaagaggcttcatatgtgccgaggtaatgaagtttgaagatctaaaa 208
            || ||||||||||| ||||| || || ||||| ||||| ||||| || || ||||| || 
Sbjct: 1084 catactgattttgagagaggatttatttgtgctgaggtcatgaaattcgaggatctcaag 1143

                                                                        
Query: 209  gagctgggcagtgaatctgctgtaaaggctgctgggaagtacaggcaggaagggaaaaca 268
            || || |||| |||| |||| || ||||| || || || ||||| ||||| || ||||||
Sbjct: 1144 gaacttggcaatgaacctgcagtcaaggccgcaggaaaatacagacaggagggtaaaaca 1203

                                               
Query: 269  tacgtggtgcaggatggagacatcatcttcttcaa 303
            || || || ||||||||||| ||||| ||||||||
Sbjct: 1204 tatgttgttcaggatggagatatcattttcttcaa 1238
to top
>gb|AY085845.1| Arabidopsis thaliana clone 18981 mRNA, complete sequence
          Length = 1497

 Score =  101 bits (51), Expect = 1e-18
 Identities = 219/275 (79%)
 Strand = Plus / Plus

                                                                        
Query: 29   atcatcaagactggttttgcagcaattcatctcatatacttcttcactgctggtcacggc 88
            |||||||| ||||| ||| |||||||| | |||||||||||||| || || || |  |  
Sbjct: 965  atcatcaaaactggattttcagcaattaacctcatatacttctttacagcagggcctgat 1024

                                                                        
Query: 89   gaggtgaagtgctggcagatcagacgtcaaagtaaagctccgcaagctgctggtgcaatt 148
            ||||||||||||||||| || ||||| ||    || ||||| |||||||| || || |||
Sbjct: 1025 gaggtgaagtgctggcaaataagacggcagtcaaaggctcctcaagctgcaggggccatt 1084

                                                                        
Query: 149  cacactgattttgaaagaggcttcatatgtgccgaggtaatgaagtttgaagatctaaaa 208
            || ||||||||||| ||||| || || ||||| ||||| ||||| || || ||||| || 
Sbjct: 1085 catactgattttgagagaggatttatttgtgctgaggtcatgaaattcgaggatctcaag 1144

                                                                        
Query: 209  gagctgggcagtgaatctgctgtaaaggctgctgggaagtacaggcaggaagggaaaaca 268
            || || |||| |||| |||| || ||||| || || || ||||| ||||| || ||||||
Sbjct: 1145 gaacttggcaatgaacctgcagtcaaggccgcaggaaaatacagacaggagggtaaaaca 1204

                                               
Query: 269  tacgtggtgcaggatggagacatcatcttcttcaa 303
            ||  | || ||||||||||| ||||| ||||||||
Sbjct: 1205 tattttgttcaggatggagatatcattttcttcaa 1239
to top
>gb|AF108896.1|AF108896 Capsicum annuum GTP-binding protein mRNA, complete cds
          Length = 1557

 Score =  101 bits (51), Expect = 1e-18
 Identities = 147/179 (82%)
 Strand = Plus / Plus

                                                                        
Query: 125  gctccgcaagctgctggtgcaattcacactgattttgaaagaggcttcatatgtgccgag 184
            ||||| |||||||||||  ||||||| || |||||||| ||||| ||||| ||||| |||
Sbjct: 991  gctcctcaagctgctggaacaattcatacagattttgagagagggttcatctgtgctgag 1050

                                                                        
Query: 185  gtaatgaagtttgaagatctaaaagagctgggcagtgaatctgctgtaaaggctgctggg 244
            || ||||| ||||| |||||||| || || || |||||  | ||||||||||| ||||||
Sbjct: 1051 gtgatgaaatttgatgatctaaaggaacttggtagtgaggcagctgtaaaggccgctggg 1110

                                                                       
Query: 245  aagtacaggcaggaagggaaaacatacgtggtgcaggatggagacatcatcttcttcaa 303
            ||||| | ||||||||| || || || ||||| || ||||| || || || ||||||||
Sbjct: 1111 aagtataagcaggaaggtaagacctatgtggtccaagatggtgatattatattcttcaa 1169
to top
>ref|XM_641841.1| Dictyostelium discoideum hypothetical protein (DDB0190011), partial
            mRNA
          Length = 1182

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                 
Query: 122  aaagctccgcaagctgctggtgcaattcacactgattttgaaagaggcttcat 174
            |||||||| |||||||||||||  |||||||||||||| |||| ||| |||||
Sbjct: 970  aaagctccacaagctgctggtgtcattcacactgatttcgaaaaaggtttcat 1022
to top
>ref|NM_001019834.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAC27E2.03c),
            partial mRNA
          Length = 1179

 Score = 56.0 bits (28), Expect = 7e-05
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                    
Query: 125  gctccgcaagctgctggtgcaattcacactgattttgaaa 164
            ||||| || |||||||||| ||||||||||||||||||||
Sbjct: 985  gctccccaggctgctggtgtaattcacactgattttgaaa 1024
to top
>emb|Z98978.1|SPAC27E2 S.pombe chromosome I cosmid c27E2
          Length = 34595

 Score = 56.0 bits (28), Expect = 7e-05
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                    
Query: 125  gctccgcaagctgctggtgcaattcacactgattttgaaa 164
            ||||| || |||||||||| ||||||||||||||||||||
Sbjct: 5474 gctccccaggctgctggtgtaattcacactgattttgaaa 5435
to top
>gb|AC007060.3|T5I8 Arabidopsis thaliana chromosome 1 BAC T5I8 sequence, complete
            sequence
          Length = 96183

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 80/98 (81%)
 Strand = Plus / Minus

                                                                        
Query: 90   aggtgaagtgctggcagatcagacgtcaaagtaaagctccgcaagctgctggtgcaattc 149
            |||||||||||||||| || ||||| ||    || ||||| |||||||| || || ||||
Sbjct: 7964 aggtgaagtgctggcaaataagacggcagtcaaaggctcctcaagctgcaggggccattc 7905

                                                  
Query: 150  acactgattttgaaagaggcttcatatgtgccgaggta 187
            | ||||||||||| ||||| || || ||||| ||||||
Sbjct: 7904 atactgattttgagagaggatttatttgtgctgaggta 7867



 Score = 48.1 bits (24), Expect = 0.016
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                        
Query: 29   atcatcaagactggttttgcagcaattcatctcatatacttctt 72
            |||||||| ||||| ||| |||||||| | ||||||||||||||
Sbjct: 8219 atcatcaaaactggattttcagcaattaacctcatatacttctt 8176



 Score = 48.1 bits (24), Expect = 0.016
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                    
Query: 248  tacaggcaggaagggaaaacatacgtggtgcaggatggagacatcatcttcttcaa 303
            ||||| ||||| || |||||||| || || ||||||||||| ||||| ||||||||
Sbjct: 7290 tacagacaggagggtaaaacatatgttgttcaggatggagatatcattttcttcaa 7235
to top
>gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, complete sequence
          Length = 1130447

 Score = 46.1 bits (23), Expect = 0.064
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                 
Query: 269    tacgtggtgcaggatggagacatcatcttcttcaa 303
              |||| |||||||||||| |||||||| ||||||||
Sbjct: 978490 tacgaggtgcaggatggtgacatcattttcttcaa 978456
to top
>gb|AE017263.1| Mesoplasma florum L1 complete genome
          Length = 793224

 Score = 46.1 bits (23), Expect = 0.064
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                     
Query: 136    tgctggtgcaattcacactgattttgaaagaggcttcat 174
              |||||||| ||| |||||||| ||||||||||| |||||
Sbjct: 767502 tgctggtgtaatacacactgactttgaaagaggattcat 767464
to top
>gb|BC051155.1| Danio rerio zgc:55768, mRNA (cDNA clone MGC:55768 IMAGE:3816932),
            complete cds
          Length = 2150

 Score = 46.1 bits (23), Expect = 0.064
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 281  gatggagacatcatcttcttcaa 303
            |||||||||||||||||||||||
Sbjct: 1229 gatggagacatcatcttcttcaa 1251
to top
>ref|XM_843099.1| Leishmania major strain Friedlin hypothetical protein (LMJ_0497)
            partial mRNA
          Length = 1179

 Score = 46.1 bits (23), Expect = 0.064
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                               
Query: 269  tacgtggtgcaggatggagacatcatcttcttcaa 303
            |||| |||||||||||| |||||||| ||||||||
Sbjct: 1114 tacgaggtgcaggatggtgacatcattttcttcaa 1148
to top
>ref|NM_001031254.1| Gallus gallus GTP-binding protein PTD004 (PTD004), mRNA
          Length = 1728

 Score = 46.1 bits (23), Expect = 0.064
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                           
Query: 225  ctgctgtaaaggctgctgggaagtacaggca 255
            ||||||| ||||||||||| |||||||||||
Sbjct: 1179 ctgctgtcaaggctgctggaaagtacaggca 1209
to top
>emb|BX063853.1|CNS09LFL Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC45DF07 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 1001

 Score = 46.1 bits (23), Expect = 0.064
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 269 tacgtggtgcaggatggagacatcatcttcttcaa 303
           ||||||||  ||||||| |||||||||||||||||
Sbjct: 444 tacgtggtcgaggatggcgacatcatcttcttcaa 478
to top
>emb|BX060119.1|CNS09IJV Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAC40BE03 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 604

 Score = 46.1 bits (23), Expect = 0.064
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 269 tacgtggtgcaggatggagacatcatcttcttcaa 303
           ||||||||  ||||||| |||||||||||||||||
Sbjct: 503 tacgtggtcgaggatggcgacatcatcttcttcaa 469
to top
>emb|BX054899.1|CNS09EIV Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC33BB01 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 941

 Score = 46.1 bits (23), Expect = 0.064
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 269 tacgtggtgcaggatggagacatcatcttcttcaa 303
           ||||||||  ||||||| |||||||||||||||||
Sbjct: 763 tacgtggtcgaggatggcgacatcatcttcttcaa 797
to top
>emb|BX046530.1|CNS0982E Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAC20AH06 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 947

 Score = 46.1 bits (23), Expect = 0.064
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 269 tacgtggtgcaggatggagacatcatcttcttcaa 303
           ||||||||  ||||||| |||||||||||||||||
Sbjct: 501 tacgtggtcgaggatggcgacatcatcttcttcaa 467
to top
>emb|BX043324.1|CNS095LC Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAC15DE01 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 955

 Score = 46.1 bits (23), Expect = 0.064
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 269 tacgtggtgcaggatggagacatcatcttcttcaa 303
           ||||||||  ||||||| |||||||||||||||||
Sbjct: 504 tacgtggtcgaggatggcgacatcatcttcttcaa 470
to top
>emb|BX030841.1|CNS08VYL Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAA46AC02 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 976

 Score = 46.1 bits (23), Expect = 0.064
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 269 tacgtggtgcaggatggagacatcatcttcttcaa 303
           ||||||||  ||||||| |||||||||||||||||
Sbjct: 501 tacgtggtcgaggatggcgacatcatcttcttcaa 467
to top
>emb|BX024837.1|CNS08RBT Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAA38AC06 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 862

 Score = 46.1 bits (23), Expect = 0.064
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 269 tacgtggtgcaggatggagacatcatcttcttcaa 303
           ||||||||  ||||||| |||||||||||||||||
Sbjct: 507 tacgtggtcgaggatggcgacatcatcttcttcaa 473
to top
>emb|AJ719559.1| Gallus gallus mRNA for hypothetical protein, clone 3f20
          Length = 1728

 Score = 46.1 bits (23), Expect = 0.064
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                           
Query: 225  ctgctgtaaaggctgctgggaagtacaggca 255
            ||||||| ||||||||||| |||||||||||
Sbjct: 1179 ctgctgtcaaggctgctggaaagtacaggca 1209
to top
>ref|NM_214700.1| Danio rerio zgc:55768 (zgc:55768), mRNA
          Length = 2150

 Score = 46.1 bits (23), Expect = 0.064
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 281  gatggagacatcatcttcttcaa 303
            |||||||||||||||||||||||
Sbjct: 1229 gatggagacatcatcttcttcaa 1251
to top
>ref|XM_697624.1| PREDICTED: Danio rerio hypothetical protein LOC555133 (LOC555133),
           mRNA
          Length = 1115

 Score = 46.1 bits (23), Expect = 0.064
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 281 gatggagacatcatcttcttcaa 303
           |||||||||||||||||||||||
Sbjct: 268 gatggagacatcatcttcttcaa 290
to top
>dbj|AK089515.1| Mus musculus B6-derived CD11 +ve dendritic cells cDNA, RIKEN
            full-length enriched library, clone:F730044E04
            product:unclassifiable, full insert sequence
          Length = 4139

 Score = 46.1 bits (23), Expect = 0.064
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 225  ctgctgtaaaggctgctgggaag 247
            |||||||||||||||||||||||
Sbjct: 1072 ctgctgtaaaggctgctgggaag 1050
to top
>dbj|AK089447.1| Mus musculus B6-derived CD11 +ve dendritic cells cDNA, RIKEN
            full-length enriched library, clone:F730031I12
            product:RIKEN cDNA 2410114O14 gene, full insert sequence
          Length = 3717

 Score = 46.1 bits (23), Expect = 0.064
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 225  ctgctgtaaaggctgctgggaag 247
            |||||||||||||||||||||||
Sbjct: 1046 ctgctgtaaaggctgctgggaag 1024
to top
>ref|XM_311198.2| Anopheles gambiae str. PEST ENSANGP00000019083 (ENSANGG00000016594),
            mRNA
          Length = 1481

 Score = 46.1 bits (23), Expect = 0.064
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                               
Query: 269  tacgtggtgcaggatggagacatcatcttcttcaa 303
            ||||||||  ||||||| |||||||||||||||||
Sbjct: 1302 tacgtggtcgaggatggcgacatcatcttcttcaa 1336
to top
>gb|BC067579.1| Danio rerio zgc:55768, mRNA (cDNA clone MGC:85691 IMAGE:6961791),
            complete cds
          Length = 1513

 Score = 46.1 bits (23), Expect = 0.064
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 281  gatggagacatcatcttcttcaa 303
            |||||||||||||||||||||||
Sbjct: 1214 gatggagacatcatcttcttcaa 1236
to top
>gb|AC159470.17| Mus musculus 10 BAC RP24-462C5 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 175513

 Score = 46.1 bits (23), Expect = 0.064
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 225   ctgctgtaaaggctgctgggaag 247
             |||||||||||||||||||||||
Sbjct: 86256 ctgctgtaaaggctgctgggaag 86278
to top
>gb|AC167231.12| Mus musculus  BAC RP23-416P12 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 205781

 Score = 46.1 bits (23), Expect = 0.064
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 225    ctgctgtaaaggctgctgggaag 247
              |||||||||||||||||||||||
Sbjct: 171897 ctgctgtaaaggctgctgggaag 171919
to top
>gb|AE006051.1| Pasteurella multocida subsp. multocida str. Pm70 section 18 of 204
           of the complete genome
          Length = 8704

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 146 attcacactgattttgaaagaggctt 171
           ||||||||||||||||||| ||||||
Sbjct: 244 attcacactgattttgaaaaaggctt 219
to top
>gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome
          Length = 5373180

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                     
Query: 146     attcacactgattttgaaagaggcttcatatgtgccga 183
               ||||||||||||||||||| ||| |||||  |||||||
Sbjct: 3698860 attcacactgattttgaaaaaggtttcattcgtgccga 3698897
to top
>emb|CR378672.1| Photobacterium profundum SS9; segment 10/12
          Length = 348526

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 149    cacactgattttgaaagaggcttcat 174
              |||||||||||||||| |||||||||
Sbjct: 165606 cacactgattttgaaaaaggcttcat 165631
to top
>gb|AF110663.1|AF110663 Leishmania major clone LmV9-A1 putative GTP-binding protein gene,
           partial cds
          Length = 288

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 274 ggtgcaggatggagacatcatcttcttcaa 303
           |||||||||||| |||||||| ||||||||
Sbjct: 226 ggtgcaggatggtgacatcattttcttcaa 255
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>emb|AL833799.8| Mouse DNA sequence from clone RP23-26L11 on chromosome 2, complete
              sequence
          Length = 208472

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 240    ctgggaagtacaggcaggaagg 261
              ||||||||||||||||||||||
Sbjct: 164897 ctgggaagtacaggcaggaagg 164876
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>gb|AY433192.1| Aedes aegypti ASAP ID: 35469 conserved unknown mRNA sequence
          Length = 544

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 279 aggatggagacatcatcttcttcaa 303
           ||||||| |||||||||||||||||
Sbjct: 174 aggatggtgacatcatcttcttcaa 198
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>gb|DQ443128.1| Bombyx mori GTP binding protein mRNA, complete cds
          Length = 1478

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 279  aggatggagacatcatcttcttcaa 303
            ||||||| |||||||||||||||||
Sbjct: 1188 aggatggcgacatcatcttcttcaa 1212
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>ref|XM_663289.1| Cryptosporidium hominis TU502 GTP-binding protein (Chro.10311)
            partial mRNA
          Length = 1194

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                 
Query: 122  aaagctccgcaagctgctggtgcaattcacactgattttgaaagaggcttcat 174
            |||||||| |||||||| |||   || |||||||| ||||| |||||||||||
Sbjct: 982  aaagctccacaagctgcaggtattatccacactgactttgagagaggcttcat 1034
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>ref|XM_792116.1| PREDICTED: Strongylocentrotus purpuratus similar to CG1354-PA,
            isoform A (LOC592602), mRNA
          Length = 1185

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 233  aaggctgctgggaagtacaggcaggaagg 261
            ||||| |||||||||||||||||| ||||
Sbjct: 1072 aaggccgctgggaagtacaggcagcaagg 1100
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>dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, complete genome
          Length = 5727534

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                        
Query: 122     aaagctccgcaagctgctggtgcaattcacactgattttga 162
               ||||| |||||||| ||||| | |||||||||||| |||||
Sbjct: 5708515 aaagcgccgcaagcggctggagtaattcacactgactttga 5708475
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>ref|XM_628099.1| Cryptosporidium parvum Iowa II yyaF/YCHF TRANSFAC/OBG family small
            GTpase plus RNA binding domain TGS (cgd1_2760), partial
            mRNA
          Length = 1197

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                 
Query: 122  aaagctccgcaagctgctggtgcaattcacactgattttgaaagaggcttcat 174
            |||||||| |||||||| |||   || |||||||| ||||| |||||||||||
Sbjct: 985  aaagctccacaagctgcaggtattatccacactgactttgagagaggcttcat 1037
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>gb|AC055766.31|AC055766 Mus musculus X BAC RP23-149C7 (Roswell Park Cancer Institute Mouse BAC
             Library) complete sequence
          Length = 222658

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 223   atctgctgtaaaggctgctgg 243
             |||||||||||||||||||||
Sbjct: 56761 atctgctgtaaaggctgctgg 56781
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>gb|AC012001.6| Homo sapiens BAC clone RP11-465G21 from 2, complete sequence
          Length = 151336

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 148    tcacactgattttgaaagagg 168
              |||||||||||||||||||||
Sbjct: 109790 tcacactgattttgaaagagg 109770
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>gb|CP000084.1| Candidatus Pelagibacter ubique HTCC1062, complete genome
          Length = 1308759

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                               
Query: 132    aagctgctggtgcaattcacactgattttgaaa 164
              |||| ||||||| ||| ||||||||||||||||
Sbjct: 110300 aagcagctggtgaaatacacactgattttgaaa 110332
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>gb|AE017321.1| Wolbachia endosymbiont strain TRS of Brugia malayi, complete genome
          Length = 1080084

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                               
Query: 132    aagctgctggtgcaattcacactgattttgaaa 164
              |||| ||||||| |||||||| |||||||||||
Sbjct: 203758 aagcagctggtgtaattcacaatgattttgaaa 203726
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>gb|J02677.1|HEAMTS H.haemolyticus DNA methylase gene, complete cds
          Length = 1476

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 52  aattcatctcatatacttctt 72
           |||||||||||||||||||||
Sbjct: 593 aattcatctcatatacttctt 573
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>gb|AC123684.8| Mus musculus chromosome 3, clone RP23-297F14, complete sequence
          Length = 200566

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 241   tgggaagtacaggcaggaag 260
             ||||||||||||||||||||
Sbjct: 40082 tgggaagtacaggcaggaag 40101



 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 241   tgggaagtacaggcaggaag 260
             ||||||||||||||||||||
Sbjct: 40061 tgggaagtacaggcaggaag 40080
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>gb|AC121873.3| Mus musculus BAC clone RP24-123L3 from chromosome 19, complete sequence
          Length = 209035

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 241   tgggaagtacaggcaggaag 260
             ||||||||||||||||||||
Sbjct: 76132 tgggaagtacaggcaggaag 76151
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>gb|AC126608.20| Mus musculus chromosome 19, clone RP24-166L20, complete sequence
          Length = 139126

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 241    tgggaagtacaggcaggaag 260
              ||||||||||||||||||||
Sbjct: 138361 tgggaagtacaggcaggaag 138380
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>emb|BX897727.17| Zebrafish DNA sequence from clone DKEY-90A13 in linkage group 23,
              complete sequence
          Length = 236277

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 222    aatctgctgtaaaggctgct 241
              ||||||||||||||||||||
Sbjct: 113070 aatctgctgtaaaggctgct 113051
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>gb|AC098715.3| Mus musculus BAC clone RP23-2D23 from 7, complete sequence
          Length = 247835

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 133   agctgctggtgcaattcacactga 156
             |||||||||| |||||||||||||
Sbjct: 70518 agctgctggttcaattcacactga 70495
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>emb|X64275.1|SV41RNA Simian parainfluenza virus 41 NP, P-V, M, F, HN and L genes,
           genomic RNA
          Length = 15450

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 252 ggcaggaagggaaaacatac 271
           ||||||||||||||||||||
Sbjct: 400 ggcaggaagggaaaacatac 381
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>gb|DQ397623.1| Cenarchaeum symbiosum clone C15D07, complete sequence
          Length = 43058

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 257   gaagggaaaacatacgtggt 276
             ||||||||||||||||||||
Sbjct: 19389 gaagggaaaacatacgtggt 19370
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>gb|AC023395.8| Homo sapiens chromosome 18, clone RP11-484N16, complete sequence
          Length = 160084

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 249   acaggcaggaagggaaaaca 268
             ||||||||||||||||||||
Sbjct: 78143 acaggcaggaagggaaaaca 78162
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>gb|AF310989.1| Influenza A virus (A/Red Kont/Delaware/254/94(H8N4)) segment 4
           hemagglutinin (HA1) mRNA, partial cds
          Length = 1229

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 281 gatggagacatcatcttctt 300
           ||||||||||||||||||||
Sbjct: 570 gatggagacatcatcttctt 589
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>gb|S56065.1| nucleoprotein (NP) [simian virus 41, mRNA, 1898 nt]
          Length = 1898

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 252 ggcaggaagggaaaacatac 271
           ||||||||||||||||||||
Sbjct: 400 ggcaggaagggaaaacatac 381
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>emb|BX322666.10| Zebrafish DNA sequence from clone CH211-199D3 in linkage group 10,
             complete sequence
          Length = 101165

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 272   gtggtgcaggatggagacat 291
             ||||||||||||||||||||
Sbjct: 77453 gtggtgcaggatggagacat 77472
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>gb|AC119043.4| Homo sapiens 3 BAC RP11-582I9 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 164027

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 194   tttgaagatctaaaagagct 213
             ||||||||||||||||||||
Sbjct: 67703 tttgaagatctaaaagagct 67722
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>emb|AL807769.8| Zebrafish DNA sequence from clone CH211-197G8, complete sequence
          Length = 188344

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 222   aatctgctgtaaaggctgct 241
             ||||||||||||||||||||
Sbjct: 74294 aatctgctgtaaaggctgct 74275
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>gb|AY653733.1| Acanthamoeba polyphaga mimivirus, complete genome
          Length = 1181404

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 145    aattcacactgattttgaaa 164
              ||||||||||||||||||||
Sbjct: 558073 aattcacactgattttgaaa 558054
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>emb|AL714027.8| Mouse DNA sequence from clone RP23-96E23 on chromosome X, complete
              sequence
          Length = 175809

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 216    gcagtgaatctgctgtaaag 235
              ||||||||||||||||||||
Sbjct: 163166 gcagtgaatctgctgtaaag 163185


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,157,470
Number of Sequences: 3902068
Number of extensions: 3157470
Number of successful extensions: 59300
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 59146
Number of HSP's gapped (non-prelim): 150
length of query: 303
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 281
effective length of database: 17,147,199,772
effective search space: 4818363135932
effective search space used: 4818363135932
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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