ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags11p16 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 1039 bits (524), Expect = 0.0 Identities = 588/611 (96%), Gaps = 3/611 (0%) Strand = Plus / Minus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 78746 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 78687 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 78686 ataagatataggattccactatgtatggtctatgaattacatcataaaaggcaatgtgat 78627 Query: 122 aaagcatcaatataataaaactaatagagaatgaaaaattgtaacttgaaagaagaacta 181 |||||||||||||||||||| ||||||||||| ||||||| |||||||||| |||||||| Sbjct: 78626 aaagcatcaatataataaaaataatagagaattaaaaattttaacttgaaacaagaacta 78567 Query: 182 caaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcgg 241 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 78566 caaatttaaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcgg 78507 Query: 242 aaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcag 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 78506 aaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcag 78447 Query: 302 tgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttcat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 78446 tgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttcat 78387 Query: 362 tgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaac 421 ||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 78386 tgggtgggatggcggaacaaaccaaaaaaattgtcttatttggtaagtttataaattaac 78327 Query: 422 aaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaatacttt 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 78326 aaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaatacttt 78267 Query: 482 accgcgattcaataagagtaaaaataaggatattttttagaaggactacattattatcta 541 ||||||||||||||||||| ||||||||||| ||||| ||||||| ||| |||||||| Sbjct: 78266 accgcgattcaataagagtcaaaataaggatttttttaagaaggattac---attatcta 78210 Query: 542 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 601 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 78209 taaatatagaatttagataaatatacacacacatctggatatattctagatcttcttttt 78150 Query: 602 tgactatatat 612 ||||||||||| Sbjct: 78149 tgactatatat 78139
>gb|DQ113928.1| Calamagrostis muiriana isolate B1 ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 796 Score = 852 bits (430), Expect = 0.0 Identities = 564/609 (92%), Gaps = 4/609 (0%) Strand = Plus / Minus Query: 5 aaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataaata 64 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || Sbjct: 618 aaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaattaagta 559 Query: 65 agatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaaaaa 124 |||||||| |||||| | ||||||||||||||||| |||||||||| ||||||||| ||| Sbjct: 558 agatataggattccaatatgtatggtctatgaattgcatcataaaaagcaatgtgataaa 499 Query: 125 gcatcaatataataaaactaatagagaatgaaaaattgtaacttgaaagaagaactacaa 184 ||||||||||||||||| ||||||||||| | |||| ||||||||||| |||||||| || Sbjct: 498 gcatcaatataataaaaataatagagaattagaaatcgtaacttgaaacaagaactagaa 439 Query: 185 attttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaa 244 |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 438 atttaaagcaataataaagagccgccctggttaataaaactgagaaaattaactcggaaa 379 Query: 245 gaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgg 304 ||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||| Sbjct: 378 gaaattttttggaagctccattgtggaattcagacctaaccattcaaggagaagcagtgg 319 Query: 305 gaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttcattgg 364 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 318 gaacgacagaacctatgattccataggattttattgaaaagaatcctaatacttcattgg 259 Query: 365 gtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaa 424 |||||||||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 258 gtgggatggcggaacaaaccaaaaaaattgtcttatttggtaaggttataaattaacaaa 199 Query: 425 taagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttacc 484 ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| Sbjct: 198 taagacaggaaagagtaaatattcgcccgcgaaatactttttgaattagaatactttacc 139 Query: 485 gcgattcaataagagtaaaaataaggatattttttagaaggactacattattatctat-a 543 |||||||||||||||||||||||||||||||| ||||| ||| || |||||| | Sbjct: 138 attattcaataagagtaaaaataaggatattttttttaaggattac---atcatctataa 82 Query: 544 aatatagaatttagataaatatccacacacatctggatatattctagatcttcttttttg 603 ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||| Sbjct: 81 aatatagaatttagataaatagacacacacatctagatatattctagatcttctttcttg 22 Query: 604 actatatat 612 ||||||||| Sbjct: 21 actatatat 13
>gb|DQ113934.1| Calamagrostis breweri isolate X17 ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 796 Score = 837 bits (422), Expect = 0.0 Identities = 562/609 (92%), Gaps = 4/609 (0%) Strand = Plus / Minus Query: 5 aaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataaata 64 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || Sbjct: 618 aaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaattaagta 559 Query: 65 agatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaaaaa 124 |||||||| |||||| | ||||||||||||||||| |||||||||| ||||||||| ||| Sbjct: 558 agatataggattccaatatgtatggtctatgaattgcatcataaaaagcaatgtgataaa 499 Query: 125 gcatcaatataataaaactaatagagaatgaaaaattgtaacttgaaagaagaactacaa 184 ||||||||||||||||| ||||||||||| | |||| |||||||||| |||||||| || Sbjct: 498 gcatcaatataataaaaataatagagaattagaaatcataacttgaaacaagaactagaa 439 Query: 185 attttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaa 244 |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 438 atttaaagcaataataaagagccgccctggttaataaaactgagaaaattaactcggaaa 379 Query: 245 gaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgg 304 ||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||| Sbjct: 378 gaaattttttggaagctccattgtggaattcagacctaaccattcaaggagaagcagtgg 319 Query: 305 gaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttcattgg 364 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 318 gaacgacagaacctatgattccataggattttattgaaaagaatcctaatacttcattgg 259 Query: 365 gtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaa 424 |||||||||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 258 gtgggatggcggaacaaaccaaaaaaattgtcttatttggtaaggttataaattaacaaa 199 Query: 425 taagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttacc 484 ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| Sbjct: 198 taagacaggaaagagtaaatattcgcccgcgaaatactttttgaattagaatactttacc 139 Query: 485 gcgattcaataagagtaaaaataaggatattttttagaaggactacattattatctat-a 543 |||||||||||||||||||||||||||||||| ||||| ||| || ||| || | Sbjct: 138 attattcaataagagtaaaaataaggatattttttttaaggattac---atcatccataa 82 Query: 544 aatatagaatttagataaatatccacacacatctggatatattctagatcttcttttttg 603 ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||| Sbjct: 81 aatatagaatttagataaatagacacacacatctagatatattctagatcttctttcttg 22 Query: 604 actatatat 612 ||||||||| Sbjct: 21 actatatat 13
>gb|DQ113933.1| Calamagrostis breweri isolate RMP0198 ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 796 Score = 837 bits (422), Expect = 0.0 Identities = 562/609 (92%), Gaps = 4/609 (0%) Strand = Plus / Minus Query: 5 aaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataaata 64 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || Sbjct: 618 aaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaattaagta 559 Query: 65 agatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaaaaa 124 |||||||| |||||| | ||||||||||||||||| |||||||||| ||||||||| ||| Sbjct: 558 agatataggattccaatatgtatggtctatgaattgcatcataaaaagcaatgtgataaa 499 Query: 125 gcatcaatataataaaactaatagagaatgaaaaattgtaacttgaaagaagaactacaa 184 ||||||||||||||||| ||||||||||| | |||| |||||||||| |||||||| || Sbjct: 498 gcatcaatataataaaaataatagagaattagaaatcataacttgaaacaagaactagaa 439 Query: 185 attttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaa 244 |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 438 atttaaagcaataataaagagccgccctggttaataaaactgagaaaattaactcggaaa 379 Query: 245 gaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgg 304 ||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||| Sbjct: 378 gaaattttttggaagctccattgtggaattcagacctaaccattcaaggagaagcagtgg 319 Query: 305 gaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttcattgg 364 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 318 gaacgacagaacctatgattccataggattttattgaaaagaatcctaatacttcattgg 259 Query: 365 gtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaa 424 |||||||||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 258 gtgggatggcggaacaaaccaaaaaaattgtcttatttggtaaggttataaattaacaaa 199 Query: 425 taagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttacc 484 ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| Sbjct: 198 taagacaggaaagagtaaatattcgcccgcgaaatactttttgaattagaatactttacc 139 Query: 485 gcgattcaataagagtaaaaataaggatattttttagaaggactacattattatctat-a 543 |||||||||||||||||||||||||||||||| ||||| ||| || ||| || | Sbjct: 138 attattcaataagagtaaaaataaggatattttttttaaggattac---atcatccataa 82 Query: 544 aatatagaatttagataaatatccacacacatctggatatattctagatcttcttttttg 603 ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||| Sbjct: 81 aatatagaatttagataaatagacacacacatctagatatattctagatcttctttcttg 22 Query: 604 actatatat 612 ||||||||| Sbjct: 21 actatatat 13
>gb|DQ113932.1| Calamagrostis breweri isolate BW8259 ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 796 Score = 837 bits (422), Expect = 0.0 Identities = 562/609 (92%), Gaps = 4/609 (0%) Strand = Plus / Minus Query: 5 aaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataaata 64 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || Sbjct: 618 aaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaattaagta 559 Query: 65 agatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaaaaa 124 |||||||| |||||| | ||||||||||||||||| |||||||||| ||||||||| ||| Sbjct: 558 agatataggattccaatatgtatggtctatgaattgcatcataaaaagcaatgtgataaa 499 Query: 125 gcatcaatataataaaactaatagagaatgaaaaattgtaacttgaaagaagaactacaa 184 ||||||||||||||||| ||||||||||| | |||| |||||||||| |||||||| || Sbjct: 498 gcatcaatataataaaaataatagagaattagaaatcataacttgaaacaagaactagaa 439 Query: 185 attttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaa 244 |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 438 atttaaagcaataataaagagccgccctggttaataaaactgagaaaattaactcggaaa 379 Query: 245 gaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgg 304 ||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||| Sbjct: 378 gaaattttttggaagctccattgtggaattcagacctaaccattcaaggagaagcagtgg 319 Query: 305 gaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttcattgg 364 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 318 gaacgacagaacctatgattccataggattttattgaaaagaatcctaatacttcattgg 259 Query: 365 gtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaa 424 |||||||||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 258 gtgggatggcggaacaaaccaaaaaaattgtcttatttggtaaggttataaattaacaaa 199 Query: 425 taagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttacc 484 ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| Sbjct: 198 taagacaggaaagagtaaatattcgcccgcgaaatactttttgaattagaatactttacc 139 Query: 485 gcgattcaataagagtaaaaataaggatattttttagaaggactacattattatctat-a 543 |||||||||||||||||||||||||||||||| ||||| ||| || ||| || | Sbjct: 138 attattcaataagagtaaaaataaggatattttttttaaggattac---atcatccataa 82 Query: 544 aatatagaatttagataaatatccacacacatctggatatattctagatcttcttttttg 603 ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||| Sbjct: 81 aatatagaatttagataaatagacacacacatctagatatattctagatcttctttcttg 22 Query: 604 actatatat 612 ||||||||| Sbjct: 21 actatatat 13
>gb|DQ113931.1| Calamagrostis breweri isolate RMP0007 ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 796 Score = 837 bits (422), Expect = 0.0 Identities = 562/609 (92%), Gaps = 4/609 (0%) Strand = Plus / Minus Query: 5 aaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataaata 64 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || Sbjct: 618 aaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaattaagta 559 Query: 65 agatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaaaaa 124 |||||||| |||||| | ||||||||||||||||| |||||||||| ||||||||| ||| Sbjct: 558 agatataggattccaatatgtatggtctatgaattgcatcataaaaagcaatgtgataaa 499 Query: 125 gcatcaatataataaaactaatagagaatgaaaaattgtaacttgaaagaagaactacaa 184 ||||||||||||||||| ||||||||||| | |||| |||||||||| |||||||| || Sbjct: 498 gcatcaatataataaaaataatagagaattagaaatcataacttgaaacaagaactagaa 439 Query: 185 attttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaa 244 |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 438 atttaaagcaataataaagagccgccctggttaataaaactgagaaaattaactcggaaa 379 Query: 245 gaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgg 304 ||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||| Sbjct: 378 gaaattttttggaagctccattgtggaattcagacctaaccattcaaggagaagcagtgg 319 Query: 305 gaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttcattgg 364 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 318 gaacgacagaacctatgattccataggattttattgaaaagaatcctaatacttcattgg 259 Query: 365 gtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaa 424 |||||||||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 258 gtgggatggcggaacaaaccaaaaaaattgtcttatttggtaaggttataaattaacaaa 199 Query: 425 taagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttacc 484 ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| Sbjct: 198 taagacaggaaagagtaaatattcgcccgcgaaatactttttgaattagaatactttacc 139 Query: 485 gcgattcaataagagtaaaaataaggatattttttagaaggactacattattatctat-a 543 |||||||||||||||||||||||||||||||| ||||| ||| || ||| || | Sbjct: 138 attattcaataagagtaaaaataaggatattttttttaaggattac---atcatccataa 82 Query: 544 aatatagaatttagataaatatccacacacatctggatatattctagatcttcttttttg 603 ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||| Sbjct: 81 aatatagaatttagataaatagacacacacatctagatatattctagatcttctttcttg 22 Query: 604 actatatat 612 ||||||||| Sbjct: 21 actatatat 13
>gb|DQ113930.1| Calamagrostis muiriana isolate B4 ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 796 Score = 837 bits (422), Expect = 0.0 Identities = 562/609 (92%), Gaps = 4/609 (0%) Strand = Plus / Minus Query: 5 aaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataaata 64 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || Sbjct: 618 aaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaattaagta 559 Query: 65 agatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaaaaa 124 |||||||| |||||| | ||||||||||||||||| |||||||||| ||||||||| ||| Sbjct: 558 agatataggattccaatatgtatggtctatgaattgcatcataaaaagcaatgtgataaa 499 Query: 125 gcatcaatataataaaactaatagagaatgaaaaattgtaacttgaaagaagaactacaa 184 ||||||||||||||||| ||||||||||| | |||| |||||||||| |||||||| || Sbjct: 498 gcatcaatataataaaaataatagagaattagaaatcataacttgaaacaagaactagaa 439 Query: 185 attttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaa 244 |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 438 atttaaagcaataataaagagccgccctggttaataaaactgagaaaattaactcggaaa 379 Query: 245 gaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgg 304 ||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||| Sbjct: 378 gaaattttttggaagctccattgtggaattcagacctaaccattcaaggagaagcagtgg 319 Query: 305 gaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttcattgg 364 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 318 gaacgacagaacctatgattccataggattttattgaaaagaatcctaatacttcattgg 259 Query: 365 gtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaa 424 |||||||||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 258 gtgggatggcggaacaaaccaaaaaaattgtcttatttggtaaggttataaattaacaaa 199 Query: 425 taagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttacc 484 ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| Sbjct: 198 taagacaggaaagagtaaatattcgcccgcgaaatactttttgaattagaatactttacc 139 Query: 485 gcgattcaataagagtaaaaataaggatattttttagaaggactacattattatctat-a 543 |||||||||||||||||||||||||||||||| ||||| ||| || ||| || | Sbjct: 138 attattcaataagagtaaaaataaggatattttttttaaggattac---atcatccataa 82 Query: 544 aatatagaatttagataaatatccacacacatctggatatattctagatcttcttttttg 603 ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||| Sbjct: 81 aatatagaatttagataaatagacacacacatctagatatattctagatcttctttcttg 22 Query: 604 actatatat 612 ||||||||| Sbjct: 21 actatatat 13
>gb|DQ113929.1| Calamagrostis muiriana isolate B3 ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 796 Score = 837 bits (422), Expect = 0.0 Identities = 562/609 (92%), Gaps = 4/609 (0%) Strand = Plus / Minus Query: 5 aaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataaata 64 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || Sbjct: 618 aaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaattaagta 559 Query: 65 agatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaaaaa 124 |||||||| |||||| | ||||||||||||||||| |||||||||| ||||||||| ||| Sbjct: 558 agatataggattccaatatgtatggtctatgaattgcatcataaaaagcaatgtgataaa 499 Query: 125 gcatcaatataataaaactaatagagaatgaaaaattgtaacttgaaagaagaactacaa 184 ||||||||||||||||| ||||||||||| | |||| |||||||||| |||||||| || Sbjct: 498 gcatcaatataataaaaataatagagaattagaaatcataacttgaaacaagaactagaa 439 Query: 185 attttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaa 244 |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 438 atttaaagcaataataaagagccgccctggttaataaaactgagaaaattaactcggaaa 379 Query: 245 gaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgg 304 ||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||| Sbjct: 378 gaaattttttggaagctccattgtggaattcagacctaaccattcaaggagaagcagtgg 319 Query: 305 gaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttcattgg 364 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 318 gaacgacagaacctatgattccataggattttattgaaaagaatcctaatacttcattgg 259 Query: 365 gtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaa 424 |||||||||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 258 gtgggatggcggaacaaaccaaaaaaattgtcttatttggtaaggttataaattaacaaa 199 Query: 425 taagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttacc 484 ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| Sbjct: 198 taagacaggaaagagtaaatattcgcccgcgaaatactttttgaattagaatactttacc 139 Query: 485 gcgattcaataagagtaaaaataaggatattttttagaaggactacattattatctat-a 543 |||||||||||||||||||||||||||||||| ||||| ||| || ||| || | Sbjct: 138 attattcaataagagtaaaaataaggatattttttttaaggattac---atcatccataa 82 Query: 544 aatatagaatttagataaatatccacacacatctggatatattctagatcttcttttttg 603 ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||| Sbjct: 81 aatatagaatttagataaatagacacacacatctagatatattctagatcttctttcttg 22 Query: 604 actatatat 612 ||||||||| Sbjct: 21 actatatat 13
>gb|DQ113927.1| Calamagrostis muiriana isolate A7 ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 796 Score = 837 bits (422), Expect = 0.0 Identities = 562/609 (92%), Gaps = 4/609 (0%) Strand = Plus / Minus Query: 5 aaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataaata 64 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || Sbjct: 618 aaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaattaagta 559 Query: 65 agatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaaaaa 124 |||||||| |||||| | ||||||||||||||||| |||||||||| ||||||||| ||| Sbjct: 558 agatataggattccaatatgtatggtctatgaattgcatcataaaaagcaatgtgataaa 499 Query: 125 gcatcaatataataaaactaatagagaatgaaaaattgtaacttgaaagaagaactacaa 184 ||||||||||||||||| ||||||||||| | |||| |||||||||| |||||||| || Sbjct: 498 gcatcaatataataaaaataatagagaattagaaatcataacttgaaacaagaactagaa 439 Query: 185 attttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaa 244 |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 438 atttaaagcaataataaagagccgccctggttaataaaactgagaaaattaactcggaaa 379 Query: 245 gaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgg 304 ||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||| Sbjct: 378 gaaattttttggaagctccattgtggaattcagacctaaccattcaaggagaagcagtgg 319 Query: 305 gaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttcattgg 364 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 318 gaacgacagaacctatgattccataggattttattgaaaagaatcctaatacttcattgg 259 Query: 365 gtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaa 424 |||||||||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 258 gtgggatggcggaacaaaccaaaaaaattgtcttatttggtaaggttataaattaacaaa 199 Query: 425 taagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttacc 484 ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| Sbjct: 198 taagacaggaaagagtaaatattcgcccgcgaaatactttttgaattagaatactttacc 139 Query: 485 gcgattcaataagagtaaaaataaggatattttttagaaggactacattattatctat-a 543 |||||||||||||||||||||||||||||||| ||||| ||| || ||| || | Sbjct: 138 tttattcaataagagtaaaaataaggatattttttttaaggattac---atcatccataa 82 Query: 544 aatatagaatttagataaatatccacacacatctggatatattctagatcttcttttttg 603 ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||| Sbjct: 81 aatatagaatttagataaatagacacacacatctagatatattctagatcttctttcttg 22 Query: 604 actatatat 612 ||||||||| Sbjct: 21 actatatat 13
>gb|DQ113926.1| Calamagrostis muiriana isolate A1 ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 796 Score = 837 bits (422), Expect = 0.0 Identities = 562/609 (92%), Gaps = 4/609 (0%) Strand = Plus / Minus Query: 5 aaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataaata 64 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || Sbjct: 618 aaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaattaagta 559 Query: 65 agatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaaaaa 124 |||||||| |||||| | ||||||||||||||||| |||||||||| ||||||||| ||| Sbjct: 558 agatataggattccaatatgtatggtctatgaattgcatcataaaaagcaatgtgataaa 499 Query: 125 gcatcaatataataaaactaatagagaatgaaaaattgtaacttgaaagaagaactacaa 184 ||||||||||||||||| ||||||||||| | |||| |||||||||| |||||||| || Sbjct: 498 gcatcaatataataaaaataatagagaattagaaatcataacttgaaacaagaactagaa 439 Query: 185 attttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaa 244 |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 438 atttaaagcaataataaagagccgccctggttaataaaactgagaaaattaactcggaaa 379 Query: 245 gaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgg 304 ||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||| Sbjct: 378 gaaattttttggaagctccattgtggaattcagacctaaccattcaaggagaagcagtgg 319 Query: 305 gaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttcattgg 364 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 318 gaacgacagaacctatgattccataggattttattgaaaagaatcctaatacttcattgg 259 Query: 365 gtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaa 424 |||||||||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 258 gtgggatggcggaacaaaccaaaaaaattgtcttatttggtaaggttataaattaacaaa 199 Query: 425 taagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttacc 484 ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| Sbjct: 198 taagacaggaaagagtaaatattcgcccgcgaaatactttttgaattagaatactttacc 139 Query: 485 gcgattcaataagagtaaaaataaggatattttttagaaggactacattattatctat-a 543 |||||||||||||||||||||||||||||||| ||||| ||| || ||| || | Sbjct: 138 tttattcaataagagtaaaaataaggatattttttttaaggattac---atcatccataa 82 Query: 544 aatatagaatttagataaatatccacacacatctggatatattctagatcttcttttttg 603 ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||| Sbjct: 81 aatatagaatttagataaatagacacacacatctagatatattctagatcttctttcttg 22 Query: 604 actatatat 612 ||||||||| Sbjct: 21 actatatat 13
>gb|AY847072.1| Melica altissima ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1139 Score = 779 bits (393), Expect = 0.0 Identities = 555/607 (91%), Gaps = 7/607 (1%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || Sbjct: 190 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagagaaaa-aa 248 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||||| ||||| | ||||||||||||||||| |||||||||||||||||||| Sbjct: 249 gtaagatatagagttccaatatgtatggtctatgaattgcatcataaaaggcaatgtgat 308 Query: 122 aaagcatcaatataataaaactaatagagaatgaaaaattgtaacttgaaagaagaacta 181 |||||||||||||||||||| ||| ||||||| |||| ||||||| ||| ||||| || Sbjct: 309 aaagcatcaatataataaaaataagagagaattcgaaatcgtaacttaaaataagaagta 368 Query: 182 caaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcgg 241 ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 369 caaatttaaagcaataataaagagccgccgcggttaataaaactgagaaaattaactcgg 428 Query: 242 aaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcag 301 ||| | ||||| ||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 429 aaaaacattttaaggaagctccattgcgggattcagacctaaccattcagggagaagcag 488 Query: 302 tgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttcat 361 ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| Sbjct: 489 tgggaacgacagaacctatgactccataggattttattgaaaagaatcctaatacttcat 548 Query: 362 tgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaac 421 ||||||||||||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 549 tgggtgggatggcggaacaaaccaaaaaaattgtcttatttggtaagattataaattaac 608 Query: 422 aaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaatacttt 481 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 609 aaataagacaggaaagagtaaatattcgcccgcgaaatacttattgaattagaatacttt 668 Query: 482 accgcgattcaataagagtaaaaataa--ggatattttttagaaggactacattattatc 539 ||||||||||||||||||||||||||| ||| ||||| ||||||| ||| |||||| Sbjct: 669 accgcgattcaataagagtaaaaataaatagatttttttaagaaggattac---attatc 725 Query: 540 tataaatatagaatttagataaatatccacacacatctggatatattctagatcttcttt 599 |||||| ||||||| |||||||||| || |||||||||||||||||||||||||||||| Sbjct: 726 tataaa-atagaatatagataaatagacatacacatctggatatattctagatcttcttt 784 Query: 600 tttgact 606 |||||| Sbjct: 785 cttgact 791
>gb|AY847071.1| Glyceria striata ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1142 Score = 775 bits (391), Expect = 0.0 Identities = 559/613 (91%), Gaps = 7/613 (1%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 191 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagag-aaataa 249 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||||||||||| | ||||||||||||||||| |||||||||||||||||||| Sbjct: 250 gtaagatatagaattccaatatgtatggtctatgaattgcatcataaaaggcaatgtgat 309 Query: 122 aaagcatcaatataataaaactaatagagaatgaaaaattgtaacttgaaagaagaacta 181 |||||||||||||||||||| ||| ||||||| |||| ||||||| ||| |||||||| Sbjct: 310 aaagcatcaatataataaaaataagagagaattcgaaatcgtaacttaaaataagaacta 369 Query: 182 caaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcgg 241 |||||| ||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 370 caaattcaaagcaataataaagagccgccgcagttagtaaaactgagaaaattaactcgg 429 Query: 242 aaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcag 301 ||| | |||||| ||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 430 aaacatatttttaggaagctccattgcgggattcagacctaaccattcagggagaagcag 489 Query: 302 tgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttcat 361 ||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||| Sbjct: 490 tgggaacgacagaacctatgactccataggattttattaaaaagaatcctaatacttcat 549 Query: 362 tgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaac 421 ||||||||||||||||||||||| || |||||||||||||| |||||||||||| Sbjct: 550 tgggtgggatggcggaacaaaccaaaaaaattctcttatttggtaagcttataaattaac 609 Query: 422 aaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaatacttt 481 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 610 aaataagacaggaaagagtaaatattcgcccgcgaaatacttattgaattagaatacttt 669 Query: 482 accgcgattcaataagagtaaaaataaggatatttttt--agaaggactacattattatc 539 ||||||||||||||||||||||||||| |||||||||| ||||||| ||| |||||| Sbjct: 670 accgcgattcaataagagtaaaaataaagatatttttttaagaaggattac---attatc 726 Query: 540 tataaatatagaatttagataaatatccacacacatctggatatattctagatcttcttt 599 || ||| ||||||| |||||||||| || |||||||| |||||||||| |||||||||| Sbjct: 727 tagaaa-atagaatatagataaatagacatacacatctagatatattctggatcttcttt 785 Query: 600 tttgactatatat 612 |||||||||||| Sbjct: 786 cttgactatatat 798
>gb|AY847115.1| Streptogyna americana ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1160 Score = 771 bits (389), Expect = 0.0 Identities = 560/616 (90%), Gaps = 10/616 (1%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 225 agcaaaactaaagggatgtggataaaaggagggatgatagaaagaaggaagaggaa-taa 283 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| | |||||||||||||||||||||||||||||||||||||| Sbjct: 284 gaaagatataggattccaatatgtatggtctatgaattacatcataaaaggcaatgtgat 343 Query: 122 aaagcatcaatataataaaactaatagagaatgaaaaattgtaacttgaaagaagaacta 181 |||||||||||||||||||| ||| ||||||| |||| ||||||||||| ||||| || Sbjct: 344 aaagcatcaatataataaaaataacagagaattcgaaatcgtaacttgaaacaagaaata 403 Query: 182 caaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcgg 241 |||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||| Sbjct: 404 aaaattttaagcaataataaagagcggcccgggttaataaaactgataaaattgactcgg 463 Query: 242 aaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcag 301 |||||||||||||||||||||| |||||||||||| ||||||||||| |||||||||||| Sbjct: 464 aaagaaattttttggaagctccattgcgggattcaaacctaaccattaaaggagaagcag 523 Query: 302 tgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttcat 361 ||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||| Sbjct: 524 tgggaacgacagaacctatgactgcataggattttattgaaaagaatcctaatacttcat 583 Query: 362 tgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaac 421 ||||||||||||||||||||||| ||| ||||||||||||| |||| ||||||| Sbjct: 584 tgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttatgaattaac 643 Query: 422 aaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaatacttt 481 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 644 aaataagacaggaaagagtaaatattcgcccgcgaaatctttattgaattagaatacttt 703 Query: 482 accgcgattcaataagagtaaaaataaggatatttttt-----agaaggactacattatt 536 |||||||||||||||||||||||||||||| ||||||| |||| || ||| ||| Sbjct: 704 accgcgattcaataagagtaaaaataaggagattttttttttaagaaagattac---att 760 Query: 537 atctataaatatagaatttagataaatatccacacacatctggatatattctagatcttc 596 ||||||||| ||||||| |||||||||| ||||||||||| |||||||||||||||||| Sbjct: 761 atctataaa-atagaatatagataaataaacacacacatctagatatattctagatcttc 819 Query: 597 ttttttgactatatat 612 ||| || ||||||||| Sbjct: 820 tttcttcactatatat 835
>gb|AY847092.1| Arundoclaytonia dissimilis ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1053 Score = 759 bits (383), Expect = 0.0 Identities = 558/615 (90%), Gaps = 9/615 (1%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||| Sbjct: 122 agcaaaactaaagggatgtggataaaaggagggatgatagaaagaaagaagaggaa-taa 180 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| | |||||||||||||||||||||||||||||||||||||| Sbjct: 181 gaaagatataggattccaatatgtatggtctatgaattacatcataaaaggcaatgtgat 240 Query: 122 aaagcatcaatataataaaactaatagagaatgaaaaattgtaacttgaaagaagaacta 181 |||||||||||||||||||| ||| ||||||| |||| |||||| |||| ||||| || Sbjct: 241 aaagcatcaatataataaaaataacagagaattcgaaatcgtaactcgaaacaagaaata 300 Query: 182 caaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcgg 241 ||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||| Sbjct: 301 caaattttaagcaataataaagagcggcccgggttaagaaaactgagaaaattgactcgg 360 Query: 242 aaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcag 301 |||||||||||||||||||||| ||| || ||||||||||||||||| ||||||||| || Sbjct: 361 aaagaaattttttggaagctccattgtggaattcagacctaaccattaaaggagaagtag 420 Query: 302 tgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttcat 361 ||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||| Sbjct: 421 tgggaacgacagaacctatgaatggataggattttattgaaaagaatcctaatacttcat 480 Query: 362 tgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaac 421 ||||||||||||||||||||||| ||| ||||||||||||| ||| |||||||| Sbjct: 481 tgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttacaaattaac 540 Query: 422 aaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaatacttt 481 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 541 aaataagacaggaaagagtaaatattcgcccgcgaaatctttattgaattagaatacttt 600 Query: 482 accgcgattcaataagagtaaaaataaggatatttttt----agaaggactacattatta 537 |||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||| Sbjct: 601 accgcgattcaataagagtaaaaataaggagatttttttaaaagaaggattacattatt- 659 Query: 538 tctataaatatagaatttagataaatatccacacacatctggatatattctagatcttct 597 |||||| ||||||| |||||||||| ||||||||||| ||||||||||||||||||| Sbjct: 660 --tataaa-atagaatatagataaatagacacacacatctagatatattctagatcttct 716 Query: 598 tttttgactatatat 612 || |||||||||||| Sbjct: 717 ttcttgactatatat 731
>gb|AY912189.1| Arthrostylidium ecuadorense ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1224 Score = 753 bits (380), Expect = 0.0 Identities = 560/620 (90%), Gaps = 13/620 (2%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||| Sbjct: 243 agcaaaactaaagggatgtggataaaaggagggatgatagaaagaaagaagaggaa-taa 301 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| | |||||||||||||||||||||||||||||||||||||| Sbjct: 302 gaaagatataggattccaatatgtatggtctatgaattacatcataaaaggcaatgtgat 361 Query: 122 aaagcatcaatataataaaactaatagagaatgaaaaattgtaacttgaaagaagaacta 181 |||||||||||||||||||| ||| ||||||| |||| |||||| |||| ||||| || Sbjct: 362 aaagcatcaatataataaaaataacagagaattcgaaatcgtaactcgaaacaagaaata 421 Query: 182 caaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcgg 241 ||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||| Sbjct: 422 caaattttaagcaataataaagagcggcccgggttaagaaaactgagaaaattgactcgg 481 Query: 242 aaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcag 301 |||||||||||||||||||||| ||| || ||||||||||||||||| ||||||||| || Sbjct: 482 aaagaaattttttggaagctccattgtggaattcagacctaaccattaaaggagaagtag 541 Query: 302 tgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttcat 361 ||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||| Sbjct: 542 tgggaacgacagaacctatgaatggataggattttattgaaaagaatcctaatacttcat 601 Query: 362 tgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt-----tataaa 416 ||||||||||||||||||||||| ||| ||||||||||||| | |||||| Sbjct: 602 tgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttataatataaa 661 Query: 417 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaat 476 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 662 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaatctttattgaattagaat 721 Query: 477 actttaccgcgattcaataagagtaaaaataaggatatttttt----agaaggactacat 532 ||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||| Sbjct: 722 actttaccgcgattcaataagagtaaaaataaggagatttttttaaaagaaggattacat 781 Query: 533 tattatctataaatatagaatttagataaatatccacacacatctggatatattctagat 592 |||| |||||||||||||| |||||||||| ||||||||||| |||||||||||||| Sbjct: 782 tatt---tataaatatagaatatagataaatagacacacacatctagatatattctagat 838 Query: 593 cttcttttttgactatatat 612 ||||||| |||||||||||| Sbjct: 839 cttctttcttgactatatat 858
>gb|AY912212.1| Sirochloa parvifolia ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1217 Score = 745 bits (376), Expect = 0.0 Identities = 559/620 (90%), Gaps = 13/620 (2%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||| Sbjct: 236 agcaaaactaaagggatgtggataaaaggagggatgatagaaagaaagaagaggaa-taa 294 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| | |||||||||||||| ||||||||||||| ||||||||| Sbjct: 295 gaaagatataggattccaatatgtatggtctatgagttacatcataaaaagcaatgtgat 354 Query: 122 aaagcatcaatataataaaactaatagagaatgaaaaattgtaacttgaaagaagaacta 181 |||||||||||||||||||| ||| ||||||| |||| ||||||||||| ||||| || Sbjct: 355 aaagcatcaatataataaaaataacagagaattcgaaatcgtaacttgaaacaagaaata 414 Query: 182 caaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcgg 241 ||||||| || |||||||||||||| ||||||||||||||||||||||||||| |||||| Sbjct: 415 caaatttaaaacaataataaagagcggcccgggttaataaaactgagaaaattgactcgg 474 Query: 242 aaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcag 301 |||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||| || Sbjct: 475 aaagaaattttttggaagctccattgtgggattcagacctaaccattaaaggagaagtag 534 Query: 302 tgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttcat 361 ||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||| Sbjct: 535 tgggaacgacagaacctatgactgcataggattttattgaaaagaatcctaatacttcat 594 Query: 362 tgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt-----tataaa 416 ||||||||||||||||||||||| ||| ||||||||||||| | |||||| Sbjct: 595 tgggtgggatggcggaacaaaccaaaataattgccttatttggtaaggttataatataaa 654 Query: 417 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaat 476 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 655 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaatctttattgaattagaat 714 Query: 477 actttaccgcgattcaataagagtaaaaataaggatatttttt----agaaggactacat 532 ||||||||||||||||||||||||||||||||||| ||||||| |||| || ||| Sbjct: 715 actttaccgcgattcaataagagtaaaaataaggagattttttgttaagaaagattac-- 772 Query: 533 tattatctataaatatagaatttagataaatatccacacacatctggatatattctagat 592 |||||||||||||||||||| |||||||||| ||||||||||| |||||||||||||| Sbjct: 773 -attatctataaatatagaatatagataaatagacacacacatctagatatattctagat 831 Query: 593 cttcttttttgactatatat 612 ||||||| |||||||||||| Sbjct: 832 cttctttcttgactatatat 851
>gb|AY912193.1| Oxytenanthera abyssinica ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1222 Score = 745 bits (376), Expect = 0.0 Identities = 559/620 (90%), Gaps = 13/620 (2%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||| Sbjct: 241 agcaaaactaaagggatgtggataaaaggagggatgatagaaagaaagaagaggaa-taa 299 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| | |||||||||||||| ||||||||||||||||||||||| Sbjct: 300 gaaagatataggattccaatatgtatggtctatgagttacatcataaaaggcaatgtgat 359 Query: 122 aaagcatcaatataataaaactaatagagaatgaaaaattgtaacttgaaagaagaacta 181 |||||||||||||||||||| ||| ||||||| |||| ||||||||||| ||||| || Sbjct: 360 aaagcatcaatataataaaaataacagagaattcgaaatcgtaacttgaaacaagaaata 419 Query: 182 caaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcgg 241 ||||||| || |||||||||||||| ||||||||||||||||||||||||||| |||||| Sbjct: 420 caaatttaaaacaataataaagagcggcccgggttaataaaactgagaaaattgactcgg 479 Query: 242 aaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcag 301 |||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||| || Sbjct: 480 aaagaaattttttggaagctccattgtgggattcagacctaaccattaaaggagaagtag 539 Query: 302 tgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttcat 361 ||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||| Sbjct: 540 tgggaacgacagaacctatgactgcataggattttattgaaaagaatcctaatacttcat 599 Query: 362 tgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt-----tataaa 416 ||||||||||||||||||||||| ||| ||||||||||||| | |||||| Sbjct: 600 tgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttataatataaa 659 Query: 417 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaat 476 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 660 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaatctttattgaattagaat 719 Query: 477 actttaccgcgattcaataagagtaaaaataaggatatttttt----agaaggactacat 532 ||||||||||||||||||||||||||||||||||| ||||||| |||| || ||| Sbjct: 720 actttaccgcgattcaataagagtaaaaataaggagattttttgttaagaaagattac-- 777 Query: 533 tattatctataaatatagaatttagataaatatccacacacatctggatatattctagat 592 |||||| ||||||||||||| |||||||||| ||||||||||| |||||||||||||| Sbjct: 778 -attatccataaatatagaatatagataaatagacacacacatctagatatattctagat 836 Query: 593 cttcttttttgactatatat 612 ||||||| |||||||||||| Sbjct: 837 cttctttcttgactatatat 856
>gb|AY912192.1| Bambusa vulgaris ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1227 Score = 745 bits (376), Expect = 0.0 Identities = 559/620 (90%), Gaps = 13/620 (2%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||| Sbjct: 246 agcaaaactaaagggatgtggataaaaggagggatgatagaaagaaagaagaggaa-taa 304 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| | |||||||||||||| ||||||||||||||||||||||| Sbjct: 305 gaaagatataggattccaatatgtatggtctatgagttacatcataaaaggcaatgtgat 364 Query: 122 aaagcatcaatataataaaactaatagagaatgaaaaattgtaacttgaaagaagaacta 181 |||||||||||||||||||| ||| ||||||| |||| ||||||||||| ||||| || Sbjct: 365 aaagcatcaatataataaaaataacagagaattcgaaatcgtaacttgaaacaagaaata 424 Query: 182 caaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcgg 241 ||||||| || |||||||||||||| ||||||||||||||||||||||||||| |||||| Sbjct: 425 caaatttaaaacaataataaagagcggcccgggttaataaaactgagaaaattgactcgg 484 Query: 242 aaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcag 301 |||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||| || Sbjct: 485 aaagaaattttttggaagctccattgtgggattcagacctaaccattaaaggagaagtag 544 Query: 302 tgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttcat 361 ||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||| Sbjct: 545 tgggaacgacagaacctatgactgcataggattttattgaaaagaatcctaatacttcat 604 Query: 362 tgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt-----tataaa 416 ||||||||||||||||||||||| ||| ||||||||||||| | |||||| Sbjct: 605 tgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttataatataaa 664 Query: 417 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaat 476 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 665 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaatctttattgaattagaat 724 Query: 477 actttaccgcgattcaataagagtaaaaataaggatatttttt----agaaggactacat 532 ||||||||||||||||||||||||||||||||||| ||||||| |||| || ||| Sbjct: 725 actttaccgcgattcaataagagtaaaaataaggagattttttgttaagaaagattac-- 782 Query: 533 tattatctataaatatagaatttagataaatatccacacacatctggatatattctagat 592 |||||| ||||||||||||| |||||||||| ||||||||||| |||||||||||||| Sbjct: 783 -attatccataaatatagaatatagataaatagacacacacatctagatatattctagat 841 Query: 593 cttcttttttgactatatat 612 ||||||| |||||||||||| Sbjct: 842 cttctttcttgactatatat 861
>gb|AY912213.1| Valiha diffusa ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1163 Score = 737 bits (372), Expect = 0.0 Identities = 558/620 (90%), Gaps = 13/620 (2%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||| Sbjct: 235 agcaaaactaaagggatgtggataaaaggagggatgatagaaagaaagaagaggaa-taa 293 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| | |||||||||||||| ||||||||||||| ||||||||| Sbjct: 294 gaaagatataggattccaatatgtatggtctatgagttacatcataaaaagcaatgtgat 353 Query: 122 aaagcatcaatataataaaactaatagagaatgaaaaattgtaacttgaaagaagaacta 181 |||||||||||||||||||| ||| ||||||| |||| ||||||||||| ||||| || Sbjct: 354 aaagcatcaatataataaaaataacagagaattcgaaatcgtaacttgaaacaagaaata 413 Query: 182 caaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcgg 241 |||||||||| |||||||||||||| ||||||||||||||||||||||||||| |||||| Sbjct: 414 caaattttaaacaataataaagagcggcccgggttaataaaactgagaaaattgactcgg 473 Query: 242 aaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcag 301 |||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||| || Sbjct: 474 aaagaaattttttggaagctccattgtgggattcagacctaaccattaaaggagaagtag 533 Query: 302 tgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttcat 361 ||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||| Sbjct: 534 tgggaacgacagaacctatgactgcataggattttattgaaaagaatcctaatacttcat 593 Query: 362 tgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt-----tataaa 416 ||||||||||||||||||||||| ||| ||||||||||||| | |||||| Sbjct: 594 tgggtgggatggcggaacaaaccaaaataattgccttatttggtaaggttataatataaa 653 Query: 417 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaat 476 |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| Sbjct: 654 ttaacaaataagacaggaaagagttaatattcgcccgcgaaatctttattgaattagaat 713 Query: 477 actttaccgcgattcaataagagtaaaaataaggatatttttt----agaaggactacat 532 ||||||||||||||||||||||||||||||||||| ||||||| |||| || ||| Sbjct: 714 actttaccgcgattcaataagagtaaaaataaggagattttttgttaagaaagattac-- 771 Query: 533 tattatctataaatatagaatttagataaatatccacacacatctggatatattctagat 592 |||||||||||||||||||| | |||||||| ||||||||||| |||||||||||||| Sbjct: 772 -attatctataaatatagaatatggataaatagacacacacatctagatatattctagat 830 Query: 593 cttcttttttgactatatat 612 ||||||| |||||||||||| Sbjct: 831 cttctttcttgactatatat 850
>gb|AY912202.1| Cathariostachys madagascariensis ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1085 Score = 737 bits (372), Expect = 0.0 Identities = 558/620 (90%), Gaps = 13/620 (2%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||| Sbjct: 236 agcaaaactaaagggatgtggataaaaggagggatgatagaaagaaagaagaggaa-taa 294 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| | |||||||||||||| ||||||||||||| ||||||||| Sbjct: 295 gaaagatataggattccaatatgtatggtctatgagttacatcataaaaagcaatgtgat 354 Query: 122 aaagcatcaatataataaaactaatagagaatgaaaaattgtaacttgaaagaagaacta 181 |||||||||||||||||||| ||| ||||||| |||| ||||||||||| ||||| || Sbjct: 355 aaagcatcaatataataaaaataacagagaattcgaaatcgtaacttgaaacaagaaata 414 Query: 182 caaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcgg 241 ||||||| || |||||||||||||| ||||||||||||||||||||||||||| |||||| Sbjct: 415 caaatttaaaacaataataaagagcggcccgggttaataaaactgagaaaattgactcgg 474 Query: 242 aaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcag 301 |||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||| || Sbjct: 475 aaagaaattttttggaagctccattgtgggattcagacctaaccattaaaggagaagtag 534 Query: 302 tgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttcat 361 ||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||| Sbjct: 535 tgggaacgacagaacctatgactgcataggattttattgaaaagaatcctaatacttcat 594 Query: 362 tgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt-----tataaa 416 ||||||||||||||||||||||| ||| |||||||| |||| | |||||| Sbjct: 595 tgggtgggatggcggaacaaaccaaaataattgccttatttgataaggttataatataaa 654 Query: 417 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaat 476 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 655 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaatctttattgaattagaat 714 Query: 477 actttaccgcgattcaataagagtaaaaataaggatatttttt----agaaggactacat 532 ||||||||||||||||||||||||||||||||||| ||||||| |||| || ||| Sbjct: 715 actttaccgcgattcaataagagtaaaaataaggagattttttgttaagaaagattac-- 772 Query: 533 tattatctataaatatagaatttagataaatatccacacacatctggatatattctagat 592 |||||||||||||||||||| |||||||||| ||||||||||| |||||||||||||| Sbjct: 773 -attatctataaatatagaatatagataaatagacacacacatctagatatattctagat 831 Query: 593 cttcttttttgactatatat 612 ||||||| |||||||||||| Sbjct: 832 cttctttcttgactatatat 851
>gb|AY912199.1| Cephalostachyum pergracile ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1226 Score = 737 bits (372), Expect = 0.0 Identities = 558/620 (90%), Gaps = 13/620 (2%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||| Sbjct: 245 agcaaaactaaagggatgtggataaaaggagggatgatagaaagaaagaagaggaa-taa 303 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| | |||||||||||||| ||||||||||||||||||||||| Sbjct: 304 gaaagatataggattccaatatgtatggtctatgagttacatcataaaaggcaatgtgat 363 Query: 122 aaagcatcaatataataaaactaatagagaatgaaaaattgtaacttgaaagaagaacta 181 |||||||||||||||||||| ||| ||||||| |||| ||||||||||| ||||| || Sbjct: 364 aaagcatcaatataataaaaataacagagaattcgaaatcgtaacttgaaacaagaaata 423 Query: 182 caaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcgg 241 ||||||| || |||||||||||||| ||||||||||||||||||||||||||| |||||| Sbjct: 424 caaatttaaaacaataataaagagcggcccgggttaataaaactgagaaaattgactcgg 483 Query: 242 aaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcag 301 |||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||| || Sbjct: 484 aaagaaattttttggaagctccattgtgggattcagacctaaccattaaaggagaagtag 543 Query: 302 tgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttcat 361 ||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||| Sbjct: 544 tgggaacgacagaacctatgactgcataggattttattgaaaagaatcctaatacttcat 603 Query: 362 tgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt-----tataaa 416 ||||||||||||||||||||||| ||| ||||||||||||| | |||||| Sbjct: 604 tgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttataatataaa 663 Query: 417 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaat 476 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 664 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaatctttattgaattaaaat 723 Query: 477 actttaccgcgattcaataagagtaaaaataaggatatttttt----agaaggactacat 532 ||||||||||||||||||||||||||||||||||| ||||||| |||| || ||| Sbjct: 724 actttaccgcgattcaataagagtaaaaataaggagattttttgttaagaaagattac-- 781 Query: 533 tattatctataaatatagaatttagataaatatccacacacatctggatatattctagat 592 |||||||||||||||||||| |||||||||| ||||||||||| |||||||||||||| Sbjct: 782 -attatctataaatatagaatatagataaatagacacacacatctagatatattctagat 840 Query: 593 cttcttttttgactatatat 612 ||||||| || ||||||||| Sbjct: 841 cttctttctttactatatat 860
>gb|AF133461.1|AF133461 Buergersiochloa bambusoides ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1216 Score = 731 bits (369), Expect = 0.0 Identities = 554/612 (90%), Gaps = 7/612 (1%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 261 agcaaaactaaagggatgtggataaaaggagggatgatagaaagaaggaagaggaa-taa 319 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| | |||||||||||||| ||||||||||||||||||||| | Sbjct: 320 gaaagatataggattccaatatgtatggtctatgagttacatcataaaaggcaatgtaat 379 Query: 122 aaagcatcaatataataaaactaatagagaatgaaaaattgtaacttgaaagaagaacta 181 |||||||||||||||||||| ||| ||||||| |||||||||||||||| ||||| || Sbjct: 380 aaagcatcaatataataaaaataacagagaattcgaaattgtaacttgaaacaagaaata 439 Query: 182 caaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcgg 241 ||||||| ||||||||||||||||| || |||||||||||||||||||||||| |||||| Sbjct: 440 caaatttaaagcaataataaagagcagctcgggttaataaaactgagaaaattgactcgg 499 Query: 242 aaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcag 301 |||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||| || Sbjct: 500 aaagaaattttttggaagctccattgtgggattcagacctaaccattaaaggagaagtag 559 Query: 302 tgggaacgacagaacctatgattccatagga-ttttattgaaaagaatcctaacacttca 360 ||||||||||||||||||||| | ||||||| |||| ||||||||||| |||| |||||| Sbjct: 560 tgggaacgacagaacctatgactacataggattttttttgaaaagaattctaatacttca 619 Query: 361 ttgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaa 420 |||||||||||||||||||||||| ||| ||||||||||||| ||||||||||| Sbjct: 620 ttgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttataaattaa 679 Query: 421 caaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactt 480 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 680 caaataagacaggaaagagtaaatattcgcccgcgaaatccttattgaattagaatactt 739 Query: 481 taccgcgattcaataagagtaaaaataaggatattttttagaaggactacattattatct 540 |||||||||||||||||||| |||||||||| ||||||| | | |||||| |||| Sbjct: 740 taccgcgattcaataagagt-aaaataaggagattttttttta-taatacatt---atct 794 Query: 541 ataaatatagaatttagataaatatccacacacatctggatatattctagatcttctttt 600 ||||||||||||| |||||||||| ||||||||||| |||||||||| |||||||||| Sbjct: 795 ataaatatagaatatagataaatagacacacacatctagatatattctggatcttctttc 854 Query: 601 ttgactatatat 612 |||||||||||| Sbjct: 855 ttgactatatat 866
>gb|AY912208.1| Nastus elegantissimus ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1224 Score = 729 bits (368), Expect = 0.0 Identities = 557/620 (89%), Gaps = 13/620 (2%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||| Sbjct: 244 agcaaaactaaagggatgtggataaaaggagggatgatagaaagaaagaagaggaa-taa 302 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| | |||||||||||||| ||||||||||||||||||||||| Sbjct: 303 gaaagatataggattccaatatgtatggtctatgagttacatcataaaaggcaatgtgat 362 Query: 122 aaagcatcaatataataaaactaatagagaatgaaaaattgtaacttgaaagaagaacta 181 |||||||||||||||||||| ||| ||||||| |||| ||||||||||| ||||| || Sbjct: 363 aaagcatcaatataataaaaataacagagaattcgaaatcgtaacttgaaacaagaaata 422 Query: 182 caaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcgg 241 ||||||| || |||||||||||||| |||||||||||||||||||| |||||| |||||| Sbjct: 423 caaatttaaaacaataataaagagcggcccgggttaataaaactgataaaattgactcgg 482 Query: 242 aaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcag 301 |||||||||||||||||||||| ||| ||||||||||||||| |||| ||||||||| || Sbjct: 483 aaagaaattttttggaagctccattgtgggattcagacctaatcattaaaggagaagtag 542 Query: 302 tgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttcat 361 ||||||||||||||||||||| | || ||||||||||||||||||||||||| ||||||| Sbjct: 543 tgggaacgacagaacctatgactgcacaggattttattgaaaagaatcctaatacttcat 602 Query: 362 tgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt-----tataaa 416 ||||||||||||||||||||||| ||| ||||||||||||| | |||||| Sbjct: 603 tgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttttaatataaa 662 Query: 417 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaat 476 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 663 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaatctttattgaattagaat 722 Query: 477 actttaccgcgattcaataagagtaaaaataaggatatttttt----agaaggactacat 532 ||||||||||||||||||||||||||||||||||| ||||||| |||| || ||| Sbjct: 723 actttaccgcgattcaataagagtaaaaataaggagattttttgttaagaaagattac-- 780 Query: 533 tattatctataaatatagaatttagataaatatccacacacatctggatatattctagat 592 |||||||||||||||||||| |||||||||| ||||||||||| |||||||||||||| Sbjct: 781 -attatctataaatatagaatatagataaatagacacacacatctagatatattctagat 839 Query: 593 cttcttttttgactatatat 612 ||||||| |||||||||||| Sbjct: 840 cttctttcttgactatatat 859
>gb|AY912207.1| Nastus borbonicus ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1219 Score = 729 bits (368), Expect = 0.0 Identities = 557/620 (89%), Gaps = 13/620 (2%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||| Sbjct: 245 agcaaaactaaagggatgtggataaaaggagggatgatagaaagaaagaagaggaa-taa 303 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| | |||||||||||||| ||||||||||||| ||||||||| Sbjct: 304 gaaagatataggattccaatatgtatggtctatgagttacatcataaaaagcaatgtgat 363 Query: 122 aaagcatcaatataataaaactaatagagaatgaaaaattgtaacttgaaagaagaacta 181 |||||||||||||| ||||| ||| ||||||| |||| ||||||||||| ||||| || Sbjct: 364 aaagcatcaatatattaaaaataacagagaattcgaaatcgtaacttgaaacaagaaata 423 Query: 182 caaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcgg 241 ||||||| || |||||||||||||| ||||||||||||||||||||||||||| |||||| Sbjct: 424 caaatttaaaacaataataaagagcggcccgggttaataaaactgagaaaattgactcgg 483 Query: 242 aaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcag 301 |||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||| || Sbjct: 484 aaagaaattttttggaagctccattgtgggattcagacctaaccattaaaggagaagtag 543 Query: 302 tgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttcat 361 ||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||| Sbjct: 544 tgggaacgacagaacctatgactgcataggattttattgaaaagaatcctaatacttcat 603 Query: 362 tgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt-----tataaa 416 ||||||||||||||||||||||| ||| ||||||||||||| | |||||| Sbjct: 604 tgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttataatataaa 663 Query: 417 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaat 476 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 664 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaatctttattgaattagaat 723 Query: 477 actttaccgcgattcaataagagtaaaaataaggatatttttt----agaaggactacat 532 ||||||||||||||||||||||||||||||||||| ||||||| |||| || ||| Sbjct: 724 actttaccgcgattcaataagagtaaaaataaggagattttttgttaagaaagattac-- 781 Query: 533 tattatctataaatatagaatttagataaatatccacacacatctggatatattctagat 592 ||||||||||||||| |||| |||||||||| ||||||||||| |||||||||||||| Sbjct: 782 -attatctataaatatggaatatagataaatagacacacacatctagatatattctagat 840 Query: 593 cttcttttttgactatatat 612 ||||||| |||||||||||| Sbjct: 841 cttctttcttgactatatat 860
>gb|AY912216.1| Streptogyna americana ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1172 Score = 728 bits (367), Expect = 0.0 Identities = 561/626 (89%), Gaps = 19/626 (3%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 226 agcaaaactaaagggatgtggataaaaggagggatgatagaaagaaggaagaggaa-taa 284 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| | |||||||||||||||||||||||||||||||||||||| Sbjct: 285 gaaagatataggattccaatatgtatggtctatgaattacatcataaaaggcaatgtgat 344 Query: 122 aaagcatcaatataataaaactaatagagaatgaaaaattgtaacttgaaagaagaacta 181 |||||||||||||||||||| ||| ||||||| |||| ||||||||||| ||||| || Sbjct: 345 aaagcatcaatataataaaaataacagagaattcgaaatcgtaacttgaaacaagaaata 404 Query: 182 caaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcgg 241 |||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||| Sbjct: 405 aaaattttaagcaataataaagagcggcccgggttaataaaactgataaaattgactcgg 464 Query: 242 aaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcag 301 |||||||||||||||||||||| |||||||||||| ||||||||||| |||||||||||| Sbjct: 465 aaagaaattttttggaagctccattgcgggattcaaacctaaccattaaaggagaagcag 524 Query: 302 tgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttcat 361 ||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||| Sbjct: 525 tgggaacgacagaacctatgactgcataggattttattgaaaagaatcctaatacttcat 584 Query: 362 tgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaac 421 ||||||||||||||||||||||| ||| ||||||||||||| |||| ||||||| Sbjct: 585 tgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttatgaattaac 644 Query: 422 aaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaatacttt 481 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 645 aaataagacaggaaagagtaaatattcgcccgcgaaatctttattgaattagaatacttt 704 Query: 482 accgcgattcaat-----aagag-----taaaaataaggatatttttt-----agaagga 526 ||||||||||||| ||||| |||||||||||| ||||||| |||| || Sbjct: 705 accgcgattcaattcaataagagtaaaataaaaataaggagattttttttttaagaaaga 764 Query: 527 ctacattattatctataaatatagaatttagataaatatccacacacatctggatatatt 586 ||||| |||||||||||||||||| |||||||||| ||||||||||| |||||||| Sbjct: 765 ttacat---tatctataaatatagaatatagataaataaacacacacatctagatatatt 821 Query: 587 ctagatcttcttttttgactatatat 612 ||||||||||||| || ||||||||| Sbjct: 822 ctagatcttctttcttcactatatat 847
>gb|AY912211.1| Perrierbambus madagascariensis ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1214 Score = 724 bits (365), Expect = 0.0 Identities = 559/624 (89%), Gaps = 14/624 (2%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||| Sbjct: 227 agcaaaactaaagggatgtggataaaaggagggatgatagaaagaaagaagaggaa-taa 285 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| | |||||||||||||| ||||||||||||| ||||||||| Sbjct: 286 gaaagatataggattccaatatgtatggtctatgagttacatcataaaaagcaatgtgat 345 Query: 122 aaagcatcaatataataaaactaatagagaatgaaaaattgtaacttgaaagaagaacta 181 |||||||||||||||||||| ||| ||||||| |||| ||||||||||| ||||| || Sbjct: 346 aaagcatcaatataataaaaataacagagaattcgaaatcgtaacttgaaacaagaaata 405 Query: 182 caaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcgg 241 |||||||| | ||||||||||||| ||||||||||||||||||||||||||| |||||| Sbjct: 406 caaatttttaaaaataataaagagcggcccgggttaataaaactgagaaaattgactcgg 465 Query: 242 aaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcag 301 |||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||| || Sbjct: 466 aaagaaattttttggaagctccattgtgggattcagacctaaccattaaaggagaagtag 525 Query: 302 tgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttcat 361 ||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||| Sbjct: 526 tgggaacgacagaacctatgactgcataggattttattgaaaagaatcctaatacttcat 585 Query: 362 tgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt-----tataaa 416 ||||||||||||||||||||||| ||| ||||||||||||| | |||||| Sbjct: 586 tgggtgggatggcggaacaaaccaaaataattgccttatttggtaaggttataatataaa 645 Query: 417 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaat 476 ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| Sbjct: 646 ttaacaaataagacaggaaagagtaaatattcgcccgggaaatctttattgaattagaat 705 Query: 477 actttaccgcgattcaataagagtaaaaataaggatatttttt----agaaggactacat 532 ||||||||||||||||||||||||||||||||||| ||||||| |||| || ||||| Sbjct: 706 actttaccgcgattcaataagagtaaaaataaggagattttttgttaagaaagattacat 765 Query: 533 ----tattatctataaatatagaatttagataaatatccacacacatctggatatattct 588 ||| ||||||||||||||||| |||||||||| ||||||||||| |||||||||| Sbjct: 766 tatctataatctataaatatagaatatagataaatagacacacacatctagatatattct 825 Query: 589 agatcttcttttttgactatatat 612 ||||||||||| |||||||||||| Sbjct: 826 agatcttctttcttgactatatat 849
>gb|AF133469.1|AF133469 Nastus elatus ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1211 Score = 724 bits (365), Expect = 0.0 Identities = 557/620 (89%), Gaps = 15/620 (2%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||| Sbjct: 267 agcaaaactaaagggatgtggataaaaggagggatgatagaaagaaagaagaggaa-taa 325 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| | |||||||||||||| ||||||||||||||||||||||| Sbjct: 326 gaaagatataggattccaatatgtatggtctatgagttacatcataaaaggcaatgtgat 385 Query: 122 aaagcatcaatataataaaactaatagagaatgaaaaattgtaacttgaaagaagaacta 181 |||||||||||||||||||| ||| ||||||| |||| ||||||||||| ||||| || Sbjct: 386 aaagcatcaatataataaaaataacagagaattcgaaatcgtaacttgaaacaagaaata 445 Query: 182 caaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcgg 241 ||||||| || |||||||||||||| ||||||||||||||||||||||||||| |||||| Sbjct: 446 caaatttaaaacaataataaagagcggcccgggttaataaaactgagaaaattgactcgg 505 Query: 242 aaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcag 301 |||||||||||||||||||||| ||| ||||||||||||||| |||| ||||||||| || Sbjct: 506 aaagaaattttttggaagctccattgtgggattcagacctaatcattaaaggagaagtag 565 Query: 302 tgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttcat 361 ||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||| Sbjct: 566 tgggaacgacagaacctatgactgcataggattttattgaaaagaatcctaatacttcat 625 Query: 362 tgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt-----tataaa 416 ||||||||||||||||||||||| ||| ||||||||||||| | |||||| Sbjct: 626 tgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttataatataaa 685 Query: 417 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaat 476 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 686 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaatctttattgaattagaat 745 Query: 477 actttaccgcgattcaataagagtaaaaataaggatatttttt----agaaggactacat 532 |||||||||||||||||||||||| |||||||||| ||||||| |||| || |||| Sbjct: 746 actttaccgcgattcaataagagt-aaaataaggagattttttgttaagaaagattaca- 803 Query: 533 tattatctataaatatagaatttagataaatatccacacacatctggatatattctagat 592 |||||||||||||||||| |||||||||| ||||||||||| |||||||||||||| Sbjct: 804 ---tatctataaatatagaatatagataaatagacacacacatctagatatattctagat 860 Query: 593 cttcttttttgactatatat 612 ||||||| |||||||||||| Sbjct: 861 cttctttcttgactatatat 880
>gb|U54746.1|NEU54746 Nastus elatus ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1071 Score = 724 bits (365), Expect = 0.0 Identities = 557/620 (89%), Gaps = 15/620 (2%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||| Sbjct: 244 agcaaaactaaagggatgtggataaaaggagggatgatagaaagaaagaagaggaa-taa 302 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| | |||||||||||||| ||||||||||||||||||||||| Sbjct: 303 gaaagatataggattccaatatgtatggtctatgagttacatcataaaaggcaatgtgat 362 Query: 122 aaagcatcaatataataaaactaatagagaatgaaaaattgtaacttgaaagaagaacta 181 |||||||||||||||||||| ||| ||||||| |||| ||||||||||| ||||| || Sbjct: 363 aaagcatcaatataataaaaataacagagaattcgaaatcgtaacttgaaacaagaaata 422 Query: 182 caaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcgg 241 ||||||| || |||||||||||||| ||||||||||||||||||||||||||| |||||| Sbjct: 423 caaatttaaaacaataataaagagcggcccgggttaataaaactgagaaaattgactcgg 482 Query: 242 aaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcag 301 |||||||||||||||||||||| ||| ||||||||||||||| |||| ||||||||| || Sbjct: 483 aaagaaattttttggaagctccattgtgggattcagacctaatcattaaaggagaagtag 542 Query: 302 tgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttcat 361 ||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||| Sbjct: 543 tgggaacgacagaacctatgactgcataggattttattgaaaagaatcctaatacttcat 602 Query: 362 tgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt-----tataaa 416 ||||||||||||||||||||||| ||| ||||||||||||| | |||||| Sbjct: 603 tgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttataatataaa 662 Query: 417 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaat 476 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 663 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaatctttattgaattagaat 722 Query: 477 actttaccgcgattcaataagagtaaaaataaggatatttttt----agaaggactacat 532 |||||||||||||||||||||||| |||||||||| ||||||| |||| || |||| Sbjct: 723 actttaccgcgattcaataagagt-aaaataaggagattttttgttaagaaagattaca- 780 Query: 533 tattatctataaatatagaatttagataaatatccacacacatctggatatattctagat 592 |||||||||||||||||| |||||||||| ||||||||||| |||||||||||||| Sbjct: 781 ---tatctataaatatagaatatagataaatagacacacacatctagatatattctagat 837 Query: 593 cttcttttttgactatatat 612 ||||||| |||||||||||| Sbjct: 838 cttctttcttgactatatat 857
>gb|AF133471.1|AF133471 Glaziophyton mirabile ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1222 Score = 716 bits (361), Expect = 0.0 Identities = 557/620 (89%), Gaps = 16/620 (2%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||| Sbjct: 265 agcaaaactaaagggatgtggataaaaggagggatgatagaaagaaagaagaggaa-taa 323 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| | |||||||||||||||||||||||||||||||||||||| Sbjct: 324 gaaagatataggattccaatatgtatggtctatgaattacatcataaaaggcaatgtgat 383 Query: 122 aaagcatcaatataataaaactaatagagaatgaaaaattgtaacttgaaagaagaacta 181 |||||||||| ||||||||| ||| ||||||| ||| | |||||| |||| ||||| || Sbjct: 384 aaagcatcaaaataataaaaataacagagaattgaaa-tcgtaactcgaaacaagaaata 442 Query: 182 caaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcgg 241 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| Sbjct: 443 caaattttaagcaataataaagagcggcccgggttaataaaactgagaaaattgactcgg 502 Query: 242 aaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcag 301 |||||||||||||||||||||| ||| || ||| ||||||||||||| ||||||||| || Sbjct: 503 aaagaaattttttggaagctccattgtggaattaagacctaaccattaaaggagaagtag 562 Query: 302 tgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttcat 361 ||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||| Sbjct: 563 tgggaacgacagaacctatgactgcataggattttattgaaaagaatcctaatacttcat 622 Query: 362 tgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt-----tataaa 416 ||||||||||||||||||||||| ||| ||||||||||||| | |||||| Sbjct: 623 tgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttataatataaa 682 Query: 417 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaat 476 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 683 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaatccttattgaattagaat 742 Query: 477 actttaccgcgattcaataagagtaaaaataaggatatttttt----agaaggactacat 532 ||||||||||||||||||||||| |||||||||| ||||||| |||| || |||| Sbjct: 743 actttaccgcgattcaataagag-caaaataaggagatttttttttaagaaagattaca- 800 Query: 533 tattatctataaatatagaatttagataaatatccacacacatctggatatattctagat 592 |||||||||||||||||| |||||||||| ||||||||||| |||||||||||||| Sbjct: 801 ---tatctataaatatagaatatagataaatagacacacacatctagatatattctagat 857 Query: 593 cttcttttttgactatatat 612 ||||||| |||||||||||| Sbjct: 858 cttctttcttgactatatat 877
>gb|AF133470.1|AF133470 Bambusa longispiculata ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1206 Score = 716 bits (361), Expect = 0.0 Identities = 556/620 (89%), Gaps = 15/620 (2%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||| Sbjct: 262 agcaaaactaaagggatgtggataaaaggagggatgatagaaagaaagaagaggaa-taa 320 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| | |||||||||||||| ||||||||||||||||||||||| Sbjct: 321 gaaagatataggattccaatatgtatggtctatgagttacatcataaaaggcaatgtgat 380 Query: 122 aaagcatcaatataataaaactaatagagaatgaaaaattgtaacttgaaagaagaacta 181 |||||||||||||||||||| ||| ||||||| |||| ||||||||||| ||||| || Sbjct: 381 aaagcatcaatataataaaaataacagagaattcgaaatcgtaacttgaaacaagaaata 440 Query: 182 caaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcgg 241 ||||||| || |||||||||||||| ||||||||||||||||||||||||||| |||||| Sbjct: 441 caaatttaaaacaataataaagagcggcccgggttaataaaactgagaaaattgactcgg 500 Query: 242 aaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcag 301 |||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||| || Sbjct: 501 aaagaaattttttggaagctccattgtgggattcagacctaaccattaaaggagaagtag 560 Query: 302 tgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttcat 361 ||||||||||||||||||||| | |||||||||| ||||||||||||||||| ||||||| Sbjct: 561 tgggaacgacagaacctatgactgcataggatttaattgaaaagaatcctaatacttcat 620 Query: 362 tgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt-----tataaa 416 ||||||||||||||||||||||| ||||||||||||||||| | |||||| Sbjct: 621 tgggtgggatggcggaacaaaccaaaaaaattgtcttatttggtaaggttataatataaa 680 Query: 417 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaat 476 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 681 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaatctttattgaattagaat 740 Query: 477 actttaccgcgattcaataagagtaaaaataaggatatttttt----agaaggactacat 532 |||| ||||||||||||||||||| |||||||||| ||||||| |||| || ||| Sbjct: 741 acttaaccgcgattcaataagagt-aaaataaggagattttttgttaagaaagattac-- 797 Query: 533 tattatctataaatatagaatttagataaatatccacacacatctggatatattctagat 592 ||||| ||||||||||||| |||||||||| ||||||||||| |||||||||||||| Sbjct: 798 --ttatccataaatatagaatatagataaatagacacacacatctagatatattctagat 855 Query: 593 cttcttttttgactatatat 612 ||||||| |||||||||||| Sbjct: 856 cttctttcttgactatatat 875
>gb|U54748.1|GMU54748 Glaziophyton mirabile ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1068 Score = 716 bits (361), Expect = 0.0 Identities = 557/620 (89%), Gaps = 16/620 (2%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||| Sbjct: 242 agcaaaactaaagggatgtggataaaaggagggatgatagaaagaaagaagaggaa-taa 300 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| | |||||||||||||||||||||||||||||||||||||| Sbjct: 301 gaaagatataggattccaatatgtatggtctatgaattacatcataaaaggcaatgtgat 360 Query: 122 aaagcatcaatataataaaactaatagagaatgaaaaattgtaacttgaaagaagaacta 181 |||||||||| ||||||||| ||| ||||||| ||| | |||||| |||| ||||| || Sbjct: 361 aaagcatcaaaataataaaaataacagagaattgaaa-tcgtaactcgaaacaagaaata 419 Query: 182 caaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcgg 241 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| Sbjct: 420 caaattttaagcaataataaagagcggcccgggttaataaaactgagaaaattgactcgg 479 Query: 242 aaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcag 301 |||||||||||||||||||||| ||| || ||| ||||||||||||| ||||||||| || Sbjct: 480 aaagaaattttttggaagctccattgtggaattaagacctaaccattaaaggagaagtag 539 Query: 302 tgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttcat 361 ||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||| Sbjct: 540 tgggaacgacagaacctatgactgcataggattttattgaaaagaatcctaatacttcat 599 Query: 362 tgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt-----tataaa 416 ||||||||||||||||||||||| ||| ||||||||||||| | |||||| Sbjct: 600 tgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttataatataaa 659 Query: 417 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaat 476 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 660 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaatccttattgaattagaat 719 Query: 477 actttaccgcgattcaataagagtaaaaataaggatatttttt----agaaggactacat 532 ||||||||||||||||||||||| |||||||||| ||||||| |||| || |||| Sbjct: 720 actttaccgcgattcaataagag-caaaataaggagatttttttttaagaaagattaca- 777 Query: 533 tattatctataaatatagaatttagataaatatccacacacatctggatatattctagat 592 |||||||||||||||||| |||||||||| ||||||||||| |||||||||||||| Sbjct: 778 ---tatctataaatatagaatatagataaatagacacacacatctagatatattctagat 834 Query: 593 cttcttttttgactatatat 612 ||||||| |||||||||||| Sbjct: 835 cttctttcttgactatatat 854
>gb|U54745.1|BLU54745 Bambusa longispiculata ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1065 Score = 716 bits (361), Expect = 0.0 Identities = 556/620 (89%), Gaps = 15/620 (2%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||| Sbjct: 239 agcaaaactaaagggatgtggataaaaggagggatgatagaaagaaagaagaggaa-taa 297 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| | |||||||||||||| ||||||||||||||||||||||| Sbjct: 298 gaaagatataggattccaatatgtatggtctatgagttacatcataaaaggcaatgtgat 357 Query: 122 aaagcatcaatataataaaactaatagagaatgaaaaattgtaacttgaaagaagaacta 181 |||||||||||||||||||| ||| ||||||| |||| ||||||||||| ||||| || Sbjct: 358 aaagcatcaatataataaaaataacagagaattcgaaatcgtaacttgaaacaagaaata 417 Query: 182 caaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcgg 241 ||||||| || |||||||||||||| ||||||||||||||||||||||||||| |||||| Sbjct: 418 caaatttaaaacaataataaagagcggcccgggttaataaaactgagaaaattgactcgg 477 Query: 242 aaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcag 301 |||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||| || Sbjct: 478 aaagaaattttttggaagctccattgtgggattcagacctaaccattaaaggagaagtag 537 Query: 302 tgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttcat 361 ||||||||||||||||||||| | |||||||||| ||||||||||||||||| ||||||| Sbjct: 538 tgggaacgacagaacctatgactgcataggatttaattgaaaagaatcctaatacttcat 597 Query: 362 tgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt-----tataaa 416 ||||||||||||||||||||||| ||||||||||||||||| | |||||| Sbjct: 598 tgggtgggatggcggaacaaaccaaaaaaattgtcttatttggtaaggttataatataaa 657 Query: 417 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaat 476 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 658 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaatctttattgaattagaat 717 Query: 477 actttaccgcgattcaataagagtaaaaataaggatatttttt----agaaggactacat 532 |||| ||||||||||||||||||| |||||||||| ||||||| |||| || ||| Sbjct: 718 acttaaccgcgattcaataagagt-aaaataaggagattttttgttaagaaagattac-- 774 Query: 533 tattatctataaatatagaatttagataaatatccacacacatctggatatattctagat 592 ||||| ||||||||||||| |||||||||| ||||||||||| |||||||||||||| Sbjct: 775 --ttatccataaatatagaatatagataaatagacacacacatctagatatattctagat 832 Query: 593 cttcttttttgactatatat 612 ||||||| |||||||||||| Sbjct: 833 cttctttcttgactatatat 852
>gb|AY912203.1| Decaryochloa diadelpha ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1173 Score = 714 bits (360), Expect = 0.0 Identities = 555/620 (89%), Gaps = 13/620 (2%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||| Sbjct: 243 agcaaaactaaagggatgtggataaaaggagggatgatagaaagaaagaagaggaa-taa 301 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| | |||||||||||||| ||||||||||||| ||||||||| Sbjct: 302 gaaagatataggattccaatatgtatggtctatgagttacatcataaaaagcaatgtgat 361 Query: 122 aaagcatcaatataataaaactaatagagaatgaaaaattgtaacttgaaagaagaacta 181 |||||||||||||||||||| ||| ||||||| |||| ||||||||||| ||||| || Sbjct: 362 aaagcatcaatataataaaaataacagagaattcgaaatcgtaacttgaaacaagaaata 421 Query: 182 caaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcgg 241 |||||| || |||||||||||||| ||||||||||||||||||||||||||| |||||| Sbjct: 422 caaattgaaaacaataataaagagcggcccgggttaataaaactgagaaaattgactcgg 481 Query: 242 aaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcag 301 |||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||| || Sbjct: 482 aaagaaattttttggaagctccattgtgggattcagacctaaccattaaaggagaagtag 541 Query: 302 tgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttcat 361 ||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||| Sbjct: 542 tgggaacgacagaacctatgactgcataggattttattgaaaagaatcctaatacttcat 601 Query: 362 tgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttat-----aaa 416 ||||||||||||||||||||||| ||| ||||||||||||| |||| ||| Sbjct: 602 tgggtgggatggcggaacaaaccaaaataattgccttatttggtaaggttataataaaaa 661 Query: 417 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaat 476 |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| Sbjct: 662 ttaacaaataagacaggaaagagtcaatattcgcccgcgaaatctttattgaattagaat 721 Query: 477 actttaccgcgattcaataagagtaaaaataaggatatttttt----agaaggactacat 532 ||||||||||||||||||||||||||||||||||| ||||||| |||| || ||| Sbjct: 722 actttaccgcgattcaataagagtaaaaataaggagattttttgttaagaaagattac-- 779 Query: 533 tattatctataaatatagaatttagataaatatccacacacatctggatatattctagat 592 |||||||||||||||||||| |||||||||| ||||||||||| |||||||||| ||| Sbjct: 780 -attatctataaatatagaatatagataaatagacacacacatctagatatattctggat 838 Query: 593 cttcttttttgactatatat 612 ||||||| || ||||||||| Sbjct: 839 cttctttctttactatatat 858
>gb|AF133465.1|AF133465 Arundinaria gigantea ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1225 Score = 714 bits (360), Expect = 0.0 Identities = 556/620 (89%), Gaps = 14/620 (2%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| ||| Sbjct: 266 agcaaaactaaagggatgtggataaaaggagggatgatagaaagaaggaagaagaa-taa 324 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| | |||||||||||||| ||||||||||||||||||||||| Sbjct: 325 gaaagatataggattccaatatgtatggtctatgagttacatcataaaaggcaatgtgat 384 Query: 122 aaagcatcaatataataaaactaatagagaatgaaaaattgtaacttgaaagaagaacta 181 |||||||||||||||||||| ||| ||||||| |||| ||||||||||| || || || Sbjct: 385 aaagcatcaatataataaaaataacagagaattcgaaatcgtaacttgaaacaaaaaata 444 Query: 182 caaattttaagcaataataaa-----gagccgcccgggttaataaaactgagaaaattaa 236 |||||||||||||||||||| |||| ||||||||||||||||||||||||||| | Sbjct: 445 gaaattttaagcaataataaaataaagagcggcccgggttaataaaactgagaaaattga 504 Query: 237 ctcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggaga 296 ||||||||||||||||| | ||||||| |||||||||||||||||||||||| ||||||| Sbjct: 505 ctcggaaagaaatttttggaaagctccattgcgggattcagacctaaccattaaaggaga 564 Query: 297 agcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacac 356 || ||||||||||||||||||||||| | |||||||||||||||||||||||||||| || Sbjct: 565 agtagtgggaacgacagaacctatgactgcataggattttattgaaaagaatcctaagac 624 Query: 357 ttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaa 416 |||||||||||||||||||||||||||| ||| ||||||||||||| ||||||| Sbjct: 625 ttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttataaa 684 Query: 417 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaat 476 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 685 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaatctttattgaattagaat 744 Query: 477 actttaccgcgattcaataagagtaaaaataaggatatttttt----agaaggactacat 532 ||||| |||||||||||||||||| ||||||||| ||||||| |||| || ||| Sbjct: 745 actttcccgcgattcaataagagt-caaataaggagatttttttttaagaaagattac-- 801 Query: 533 tattatctataaatatagaatttagataaatatccacacacatctggatatattctagat 592 |||||||||||||||||||| |||||||||| ||||||||||| |||||||||||||| Sbjct: 802 -attatctataaatatagaatatagataaatagacacacacatctagatatattctagat 860 Query: 593 cttcttttttgactatatat 612 ||||||| |||||||||||| Sbjct: 861 cttctttcttgactatatat 880
>gb|U54742.1|AGU54742 Arundinaria gigantea ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1065 Score = 714 bits (360), Expect = 0.0 Identities = 556/620 (89%), Gaps = 14/620 (2%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| ||| Sbjct: 243 agcaaaactaaagggatgtggataaaaggagggatgatagaaagaaggaagaagaa-taa 301 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| | |||||||||||||| ||||||||||||||||||||||| Sbjct: 302 gaaagatataggattccaatatgtatggtctatgagttacatcataaaaggcaatgtgat 361 Query: 122 aaagcatcaatataataaaactaatagagaatgaaaaattgtaacttgaaagaagaacta 181 |||||||||||||||||||| ||| ||||||| |||| ||||||||||| || || || Sbjct: 362 aaagcatcaatataataaaaataacagagaattcgaaatcgtaacttgaaacaaaaaata 421 Query: 182 caaattttaagcaataataaa-----gagccgcccgggttaataaaactgagaaaattaa 236 |||||||||||||||||||| |||| ||||||||||||||||||||||||||| | Sbjct: 422 gaaattttaagcaataataaaataaagagcggcccgggttaataaaactgagaaaattga 481 Query: 237 ctcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggaga 296 ||||||||||||||||| | ||||||| |||||||||||||||||||||||| ||||||| Sbjct: 482 ctcggaaagaaatttttggaaagctccattgcgggattcagacctaaccattaaaggaga 541 Query: 297 agcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacac 356 || ||||||||||||||||||||||| | |||||||||||||||||||||||||||| || Sbjct: 542 agtagtgggaacgacagaacctatgactgcataggattttattgaaaagaatcctaagac 601 Query: 357 ttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaa 416 |||||||||||||||||||||||||||| ||| ||||||||||||| ||||||| Sbjct: 602 ttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttataaa 661 Query: 417 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaat 476 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 662 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaatctttattgaattagaat 721 Query: 477 actttaccgcgattcaataagagtaaaaataaggatatttttt----agaaggactacat 532 ||||| |||||||||||||||||| ||||||||| ||||||| |||| || ||| Sbjct: 722 actttcccgcgattcaataagagt-caaataaggagatttttttttaagaaagattac-- 778 Query: 533 tattatctataaatatagaatttagataaatatccacacacatctggatatattctagat 592 |||||||||||||||||||| |||||||||| ||||||||||| |||||||||||||| Sbjct: 779 -attatctataaatatagaatatagataaatagacacacacatctagatatattctagat 837 Query: 593 cttcttttttgactatatat 612 ||||||| |||||||||||| Sbjct: 838 cttctttcttgactatatat 857
>gb|AY912214.1| Temburongia simplex ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1075 Score = 708 bits (357), Expect = 0.0 Identities = 554/620 (89%), Gaps = 13/620 (2%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| ||||||||||||||||||| | | ||||| ||| Sbjct: 143 agcaaaactaaagggatgtggataaaaggagggatgatagaaagaaagnaaaggaa-taa 201 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| | |||||||||||||| ||||||||||||||||||||||| Sbjct: 202 gaaagatataggattccaatatgtatggtctatgagttacatcataaaaggcaatgtgat 261 Query: 122 aaagcatcaatataataaaactaatagagaatgaaaaattgtaacttgaaagaagaacta 181 |||||||| ||||||||||| ||| ||||||| |||| ||||||||||| ||||| || Sbjct: 262 aaagcatccatataataaaaataacagagaattcgaaatcgtaacttgaaacaagaaata 321 Query: 182 caaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcgg 241 |||||||||| |||||||||||||| ||||||||||||||||||||||||||| |||||| Sbjct: 322 caaattttaaacaataataaagagcggcccgggttaataaaactgagaaaattgactcgg 381 Query: 242 aaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcag 301 |||||||||||||||||||||| ||| || ||||||||||||||||| ||||||||| || Sbjct: 382 aaagaaattttttggaagctccattgtggaattcagacctaaccattaaaggagaagtag 441 Query: 302 tgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttcat 361 ||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||| Sbjct: 442 tgggaacgacagaacctatgactgcataggattttattgaaaagaatcctaatacttcat 501 Query: 362 tgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt-----tataaa 416 ||||||||||||||||||||||| || ||||||||||||| | |||||| Sbjct: 502 tgggtgggatggcggaacaaaccaaaaaaatttccttatttggtaaggttataatataaa 561 Query: 417 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaat 476 |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 562 ttaacaaataagacaggaaagagtaattattcgcccgcgaaatctttattgaattagaat 621 Query: 477 actttaccgcgattcaataagagtaaaaataaggatatttttt----agaaggactacat 532 |||||||||||||||||||||||||||| |||||| ||||||| |||| || ||| Sbjct: 622 actttaccgcgattcaataagagtaaaattaaggagattttttgttaagaaagattac-- 679 Query: 533 tattatctataaatatagaatttagataaatatccacacacatctggatatattctagat 592 |||||||||||||||||||| |||||||||| ||||||||||| |||||||||||||| Sbjct: 680 -attatctataaatatagaatatagataaatagacacacacatctagatatattctagat 738 Query: 593 cttcttttttgactatatat 612 ||||||| |||||||||||| Sbjct: 739 cttctttcttgactatatat 758
>gb|AF133466.1|AF133466 Pseudosasa japonica ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1225 Score = 708 bits (357), Expect = 0.0 Identities = 555/620 (89%), Gaps = 14/620 (2%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| ||| Sbjct: 266 agcaaaactaaagggatgtggataaaaggagggatgatagaaagaaggaagaagaa-taa 324 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| | |||||||||||||| ||||||||||||||||||||||| Sbjct: 325 gaaagatataggattccaatatgtatggtctatgagttacatcataaaaggcaatgtgat 384 Query: 122 aaagcatcaatataataaaactaatagagaatgaaaaattgtaacttgaaagaagaacta 181 |||||||||||||||||||| ||| ||||||| |||| ||||||||||| || || || Sbjct: 385 aaagcatcaatataataaaaataacagagaattcgaaatcgtaacttgaaacaaaaaata 444 Query: 182 caaattttaagcaataataaa-----gagccgcccgggttaataaaactgagaaaattaa 236 |||||||||||||||||||| |||| ||||||||||||||||||||||||||| | Sbjct: 445 gaaattttaagcaataataaaataaagagcggcccgggttaataaaactgagaaaattga 504 Query: 237 ctcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggaga 296 ||||||||||||||||| | ||||||| |||||||||||||||||||||||| ||||||| Sbjct: 505 ctcggaaagaaatttttggaaagctccattgcgggattcagacctaaccattaaaggaga 564 Query: 297 agcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacac 356 || ||||||||||||||||||||||| | |||||||||||||||||||||||||||| || Sbjct: 565 agtagtgggaacgacagaacctatgactgcataggattttattgaaaagaatcctaagac 624 Query: 357 ttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaa 416 |||||||||||||||||||||||||||| ||| ||||||||||||| ||||||| Sbjct: 625 ttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttataaa 684 Query: 417 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaat 476 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | Sbjct: 685 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaatctttattgaattagant 744 Query: 477 actttaccgcgattcaataagagtaaaaataaggatatttttt----agaaggactacat 532 ||||| |||||||||||||||||| ||||||||| ||||||| |||| || ||| Sbjct: 745 actttcccgcgattcaataagagt-caaataaggagatttttttttaagaaagattac-- 801 Query: 533 tattatctataaatatagaatttagataaatatccacacacatctggatatattctagat 592 |||||||||||||||||||| |||||||||| ||||||||||| |||||||||||||| Sbjct: 802 -attatctataaatatagaatatagataaatagacacacacatctagatatattctagat 860 Query: 593 cttcttttttgactatatat 612 ||||||| |||||||||||| Sbjct: 861 cttctttcttgactatatat 880
>gb|U54743.1|PJU54743 Pseudosasa japonica ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1065 Score = 708 bits (357), Expect = 0.0 Identities = 555/620 (89%), Gaps = 14/620 (2%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| ||| Sbjct: 243 agcaaaactaaagggatgtggataaaaggagggatgatagaaagaaggaagaagaa-taa 301 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| | |||||||||||||| ||||||||||||||||||||||| Sbjct: 302 gaaagatataggattccaatatgtatggtctatgagttacatcataaaaggcaatgtgat 361 Query: 122 aaagcatcaatataataaaactaatagagaatgaaaaattgtaacttgaaagaagaacta 181 |||||||||||||||||||| ||| ||||||| |||| ||||||||||| || || || Sbjct: 362 aaagcatcaatataataaaaataacagagaattcgaaatcgtaacttgaaacaaaaaata 421 Query: 182 caaattttaagcaataataaa-----gagccgcccgggttaataaaactgagaaaattaa 236 |||||||||||||||||||| |||| ||||||||||||||||||||||||||| | Sbjct: 422 gaaattttaagcaataataaaataaagagcggcccgggttaataaaactgagaaaattga 481 Query: 237 ctcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggaga 296 ||||||||||||||||| | ||||||| |||||||||||||||||||||||| ||||||| Sbjct: 482 ctcggaaagaaatttttggaaagctccattgcgggattcagacctaaccattaaaggaga 541 Query: 297 agcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacac 356 || ||||||||||||||||||||||| | |||||||||||||||||||||||||||| || Sbjct: 542 agtagtgggaacgacagaacctatgactgcataggattttattgaaaagaatcctaagac 601 Query: 357 ttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaa 416 |||||||||||||||||||||||||||| ||| ||||||||||||| ||||||| Sbjct: 602 ttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttataaa 661 Query: 417 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaat 476 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | Sbjct: 662 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaatctttattgaattagant 721 Query: 477 actttaccgcgattcaataagagtaaaaataaggatatttttt----agaaggactacat 532 ||||| |||||||||||||||||| ||||||||| ||||||| |||| || ||| Sbjct: 722 actttcccgcgattcaataagagt-caaataaggagatttttttttaagaaagattac-- 778 Query: 533 tattatctataaatatagaatttagataaatatccacacacatctggatatattctagat 592 |||||||||||||||||||| |||||||||| ||||||||||| |||||||||||||| Sbjct: 779 -attatctataaatatagaatatagataaatagacacacacatctagatatattctagat 837 Query: 593 cttcttttttgactatatat 612 ||||||| |||||||||||| Sbjct: 838 cttctttcttgactatatat 857
>gb|AY912190.1| Atractantha radiata ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1175 Score = 706 bits (356), Expect = 0.0 Identities = 560/628 (89%), Gaps = 23/628 (3%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||| Sbjct: 246 agcaaaactaaagggatgtggataaaaggagggatgatagaaagaaagaagaggaa-taa 304 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| | |||||||||||||||||||||||||||||||||||||| Sbjct: 305 gaaagatataggattccaatatgtatggtctatgaattacatcataaaaggcaatgtgat 364 Query: 122 aaagcatcaatataataaaactaatagagaatgaaaaattgtaacttgaaagaagaacta 181 |||||||||||||||||||| ||| ||||||| |||| |||||| |||| ||||| || Sbjct: 365 aaagcatcaatataataaaaataacagagaattcgaaatcgtaactcgaaacaagaaata 424 Query: 182 caaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcgg 241 |||||||||||||| |||||||||| ||||||||||||||||||||||||||| |||||| Sbjct: 425 caaattttaagcaagaataaagagcggcccgggttaataaaactgagaaaattgactcgg 484 Query: 242 aaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcag 301 |||||||||||||||||||||| ||| || ||||||||||||||||| ||||||||| || Sbjct: 485 aaagaaattttttggaagctccattgtggaattcagacctaaccattaaaggagaagtag 544 Query: 302 tgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttcat 361 ||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||| Sbjct: 545 tgggaacgacagaacctatgactgcataggattttattgaaaagaatcctaatacttcat 604 Query: 362 tgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt-----tataaa 416 ||||||||||||||||||||||| ||| ||||||||||||| | |||||| Sbjct: 605 tgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttataatataaa 664 Query: 417 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaat 476 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 665 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaat--ttattgaattagaat 722 Query: 477 actttaccgcgatt-----caataagagtaaaaataaggatatttttt-------agaag 524 |||||||||||||| ||||||||||||||||||||| ||||||| |||| Sbjct: 723 actttaccgcgattcaatacaataagagtaaaaataaggagattttttttttttaagaaa 782 Query: 525 gactacattattatctataaatatagaatttagataaatatccacacacatctggatata 584 || ||||| |||||||||||||||||| |||||||||| ||||||||||| |||||| Sbjct: 783 gattacat---tatctataaatatagaatatagataaatagacacacacatctagatata 839 Query: 585 ttctagatcttcttttttgactatatat 612 ||||||||||||||| |||||||||||| Sbjct: 840 ttctagatcttctttcttgactatatat 867
>gb|AY912200.1| Schizostachyum brachycladum ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1227 Score = 702 bits (354), Expect = 0.0 Identities = 554/620 (89%), Gaps = 11/620 (1%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||| Sbjct: 244 agcaaaactaaagggatgtggataaaaggagggatgatagaaagaaagaagaggaa-taa 302 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| | |||||||||||||| ||||||||||||||||||||||| Sbjct: 303 gaaagatataggattccaatatgtatggtctatgagttacatcataaaaggcaatgtgat 362 Query: 122 aaagcatcaatataataaaactaatagagaatgaaaaattgtaacttgaaagaagaacta 181 |||||||||||||||||||| ||| ||||||| |||| ||||||||||| ||||| || Sbjct: 363 aaagcatcaatataataaaaataacagagaattcgaaatcgtaacttgaaacaagaaata 422 Query: 182 caaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcgg 241 ||||||| || |||||||||||||| ||||||||||||||||||||||||||| |||||| Sbjct: 423 caaatttaaaacaataataaagagcggcccgggttaataaaactgagaaaattgactcgg 482 Query: 242 aaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcag 301 |||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||| || Sbjct: 483 aaagaaattttttggaagctccattgtgggattcagacctaaccattaaaggagaagtag 542 Query: 302 tgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttcat 361 ||||||||||||||||||||| | |||||||||||||||||||||||| ||| ||||||| Sbjct: 543 tgggaacgacagaacctatgactgcataggattttattgaaaagaatcataatacttcat 602 Query: 362 tgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt-----tataaa 416 |||||||||||||||||||| || ||| ||||||||||||| | |||||| Sbjct: 603 tgggtgggatggcggaacaacccaaaaaaattgccttatttggtaaggttataatataaa 662 Query: 417 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaat 476 ||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 663 ttagcaaataagacaggaaagagtaaatattcgcccgcgaaatctttattgaattaaaat 722 Query: 477 actttaccgcgattcaataagagtaaaaataaggatatttttt----agaaggactacat 532 ||||||||||||||||||||||||||||||||||| ||||||| |||| || ||||| Sbjct: 723 actttaccgcgattcaataagagtaaaaataaggagattttttgttaagaaagattacat 782 Query: 533 tattatctataaatatagaatttagataaatatccacacacatctggatatattctagat 592 || | | |||| ||||||||| |||||||||| ||||||||||| |||||||||||||| Sbjct: 783 ta-tctatatatatatagaatatagataaatagacacacacatctagatatattctagat 841 Query: 593 cttcttttttgactatatat 612 ||||||| || ||||||||| Sbjct: 842 cttctttctttactatatat 861
>gb|AY912191.1| Aulonemia patula ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1186 Score = 700 bits (353), Expect = 0.0 Identities = 553/620 (89%), Gaps = 13/620 (2%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||| Sbjct: 213 agcaaaactaaagggatgtggataaaaggagggatgatagaaagaaagaagaggaa-taa 271 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| | |||||||||||||||||||||||||||||||||||||| Sbjct: 272 gaaagatataggattccaatatgtatggtctatgaattacatcataaaaggcaatgtgat 331 Query: 122 aaagcatcaatataataaaactaatagagaatgaaaaattgtaacttgaaagaagaacta 181 |||||||||||||||||||| ||| ||||||| |||| |||||| |||| ||||| || Sbjct: 332 aaagcatcaatataataaaaataacagagaattcgaaatcgtaactcgaaacaagaaata 391 Query: 182 caaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcgg 241 ||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||| Sbjct: 392 caaattttaagcaataataaagagcggcccgggttaagaaaactgagaaaattggctcgg 451 Query: 242 aaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcag 301 ||||||| |||||||||||||| ||| || ||||||||||||||||| || |||||| || Sbjct: 452 aaagaaactttttggaagctccattgtggaattcagacctaaccattaaaagagaagtag 511 Query: 302 tgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttcat 361 ||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||| Sbjct: 512 tgggaacgacagaacctatgactgcataggattttattgaaaagaatcctaatacttcat 571 Query: 362 tgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt-----tataaa 416 |||||||||||||||||||| || ||| ||||||||||||| | |||||| Sbjct: 572 tgggtgggatggcggaacaanccaaaaaaattgccttatttggtaaggttataatataaa 631 Query: 417 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaat 476 ||| |||||||| |||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 632 ttagcaaataaggcaggaaagagtaaatattcgcccgcgaaatctttattgaattagaat 691 Query: 477 actttaccgcgattcaataagagtaaaaataaggatatttttt----agaaggactacat 532 |||| ||||||||||||||||||||||||||||| ||||||| |||| || ||| Sbjct: 692 tctttcccgcgattcaataagagtaaaaataaggagatttttttttaagaaagattac-- 749 Query: 533 tattatctataaatatagaatttagataaatatccacacacatctggatatattctagat 592 |||||||||||||||||||| |||||||||| |||||||||||| |||||||||||||| Sbjct: 750 -attatctataaatatagaatatagataaatagccacacacatctagatatattctagat 808 Query: 593 cttcttttttgactatatat 612 ||||||| |||||||||||| Sbjct: 809 cttctttcttgactatatat 828
>gb|AF133467.1|AF133467 Phyllostachys pubescens ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1232 Score = 698 bits (352), Expect = 0.0 Identities = 554/620 (89%), Gaps = 14/620 (2%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| ||| Sbjct: 266 agcaaaactaaagggatgtggataaaaggagggatgatagaaagaaggaagaagaa-taa 324 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| | |||||||||||||| ||||||||||||||||||||||| Sbjct: 325 gaaagatataggattccaatatgtatggtctatgagttacatcataaaaggcaatgtgat 384 Query: 122 aaagcatcaatataataaaactaatagagaatgaaaaattgtaacttgaaagaagaacta 181 |||||||||||||||||||| ||| ||||||| |||| ||||||||||| || || || Sbjct: 385 aaagcatcaatataataaaaataacagagaattcgaaatcgtaacttgaaacaaaaaata 444 Query: 182 caaattttaagcaataataaa-----gagccgcccgggttaataaaactgagaaaattaa 236 |||||||||||||||||||| |||| ||||||||||||||||||||||||||| | Sbjct: 445 gaaattttaagcaataataaaataaagagcggcccgggttaataaaactgagaaaattga 504 Query: 237 ctcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggaga 296 ||||||||||||||||| | ||||||| ||| |||||||||||||||||||| ||||||| Sbjct: 505 ctcggaaagaaatttttggaaagctccattgtgggattcagacctaaccattaaaggaga 564 Query: 297 agcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacac 356 || ||||||||||||||||||||||| | |||||||||||||||||||||||||||| || Sbjct: 565 agtagtgggaacgacagaacctatgactgcataggattttattgaaaagaatcctaagac 624 Query: 357 ttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaa 416 |||||||||||||||||||||||||||| ||| ||||||||||||| ||||||| Sbjct: 625 ttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttataaa 684 Query: 417 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaat 476 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 685 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaatctttattgaattagaat 744 Query: 477 actttaccgcgattcaataagagtaaaaataaggatatttttt----agaaggactacat 532 ||||| |||||||||||||||||| |||||||| ||||||| |||| || ||| Sbjct: 745 actttcccgcgattcaataagagt-cgaataaggagatttttttttaagaaagattac-- 801 Query: 533 tattatctataaatatagaatttagataaatatccacacacatctggatatattctagat 592 |||||||||||||||||||| |||||||||| ||||||||||| |||||||||||||| Sbjct: 802 -attatctataaatatagaatatagataaatagacacacacatctagatatattctagat 860 Query: 593 cttcttttttgactatatat 612 ||||||| |||||||||||| Sbjct: 861 cttctttcttgactatatat 880
>gb|U54744.1|PPU54744 Phyllostachys pubescens ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1072 Score = 698 bits (352), Expect = 0.0 Identities = 554/620 (89%), Gaps = 14/620 (2%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| ||| Sbjct: 243 agcaaaactaaagggatgtggataaaaggagggatgatagaaagaaggaagaagaa-taa 301 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| | |||||||||||||| ||||||||||||||||||||||| Sbjct: 302 gaaagatataggattccaatatgtatggtctatgagttacatcataaaaggcaatgtgat 361 Query: 122 aaagcatcaatataataaaactaatagagaatgaaaaattgtaacttgaaagaagaacta 181 |||||||||||||||||||| ||| ||||||| |||| ||||||||||| || || || Sbjct: 362 aaagcatcaatataataaaaataacagagaattcgaaatcgtaacttgaaacaaaaaata 421 Query: 182 caaattttaagcaataataaa-----gagccgcccgggttaataaaactgagaaaattaa 236 |||||||||||||||||||| |||| ||||||||||||||||||||||||||| | Sbjct: 422 gaaattttaagcaataataaaataaagagcggcccgggttaataaaactgagaaaattga 481 Query: 237 ctcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggaga 296 ||||||||||||||||| | ||||||| ||| |||||||||||||||||||| ||||||| Sbjct: 482 ctcggaaagaaatttttggaaagctccattgtgggattcagacctaaccattaaaggaga 541 Query: 297 agcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacac 356 || ||||||||||||||||||||||| | |||||||||||||||||||||||||||| || Sbjct: 542 agtagtgggaacgacagaacctatgactgcataggattttattgaaaagaatcctaagac 601 Query: 357 ttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaa 416 |||||||||||||||||||||||||||| ||| ||||||||||||| ||||||| Sbjct: 602 ttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttataaa 661 Query: 417 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaat 476 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 662 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaatctttattgaattagaat 721 Query: 477 actttaccgcgattcaataagagtaaaaataaggatatttttt----agaaggactacat 532 ||||| |||||||||||||||||| |||||||| ||||||| |||| || ||| Sbjct: 722 actttcccgcgattcaataagagt-cgaataaggagatttttttttaagaaagattac-- 778 Query: 533 tattatctataaatatagaatttagataaatatccacacacatctggatatattctagat 592 |||||||||||||||||||| |||||||||| ||||||||||| |||||||||||||| Sbjct: 779 -attatctataaatatagaatatagataaatagacacacacatctagatatattctagat 837 Query: 593 cttcttttttgactatatat 612 ||||||| |||||||||||| Sbjct: 838 cttctttcttgactatatat 857
>gb|AY912209.1| Nastus elongatus ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1098 Score = 692 bits (349), Expect = 0.0 Identities = 552/620 (89%), Gaps = 19/620 (3%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||| Sbjct: 125 agcaaaactaaagggatgtggataaaaggagggatgatagaaagaaagaagaggaa-taa 183 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| | |||||||||||||| ||||||||||||| ||||||||| Sbjct: 184 gaaagatataggattccaatatgtatggtctatgagttacatcataaaaagcaatgtgat 243 Query: 122 aaagcatcaatataataaaactaatagagaatgaaaaattgtaacttgaaagaagaacta 181 |||||||||||||||||||| ||| ||||||| |||| ||||||||||| ||||| || Sbjct: 244 aaagcatcaatataataaaaataacagagaattcgaaatcgtaacttgaaacaagaaata 303 Query: 182 caaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcgg 241 ||||||| || |||||||||||||| ||||||||||||||||||||||||||| |||||| Sbjct: 304 caaatttaaaacaataataaagagcggcccgggttaataaaactgagaaaattgactcgg 363 Query: 242 aaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcag 301 |||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||| || Sbjct: 364 aaagaaattttttggaagctccattgtgggattcagacctaaccattaaaggagaagtag 423 Query: 302 tgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttcat 361 ||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||| Sbjct: 424 tgggaacgacagaacctatgactgcataggattttattgaaaagaatcctaatacttcat 483 Query: 362 tgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt-----tataaa 416 ||||||||||||||||||||||| ||| ||||||||||||| | |||||| Sbjct: 484 tgggtgggatggcggaacaaaccaaaataattgccttatttggtaaggttataatataaa 543 Query: 417 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaat 476 ||||||||||||||||||||||||||||||||||||||||||| || ||||||| Sbjct: 544 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaatcttt------ttagaat 597 Query: 477 actttaccgcgattcaataagagtaaaaataaggatatttttt----agaaggactacat 532 ||||||||||||||||||||||||||||||||| | ||||||| |||| || ||| Sbjct: 598 actttaccgcgattcaataagagtaaaaataagaagattttttgttaagaaagattac-- 655 Query: 533 tattatctataaatatagaatttagataaatatccacacacatctggatatattctagat 592 |||||||||||||||||||| |||||||||| ||||||||||| |||||||||||||| Sbjct: 656 -attatctataaatatagaatatagataaatagacacacacatctagatatattctagat 714 Query: 593 cttcttttttgactatatat 612 ||||||| |||||||||||| Sbjct: 715 cttctttcttgactatatat 734
>gb|AF133468.1|AF133468 Schizostachyum luzonicum ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1225 Score = 686 bits (346), Expect = 0.0 Identities = 554/621 (89%), Gaps = 16/621 (2%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||| Sbjct: 267 agcaaaactaaagggatgtggataaaaggagggatgatagaaagaaagaagaggaa-taa 325 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| ||| || | |||||||||||||| ||||||||||||||||||||||| Sbjct: 326 gaaagatataggatttcaatatgtatggtctatgagttacatcataaaaggcaatgtgat 385 Query: 122 aaagcatcaatataataaaac-taatagagaatgaaaaattgtaacttgaaagaagaact 180 |||||||||||| || |||| ||| ||||||| |||| ||||||||||| ||||| | Sbjct: 386 aaagcatcaataaaaaaaaaaataacagagaattcgaaatcgtaacttgaaacaagaaat 445 Query: 181 acaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcg 240 |||||||| || |||||||||||||| ||||||||||||||||||||||||||| ||||| Sbjct: 446 acaaatttaaaacaataataaagagcggcccgggttaataaaactgagaaaattgactcg 505 Query: 241 gaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagca 300 ||||||||||||||||||||||| ||| ||||||||||||||| |||| ||||||||| | Sbjct: 506 gaaagaaattttttggaagctccattgtgggattcagacctaatcattaaaggagaagta 565 Query: 301 gtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttca 360 |||||||||||||||||||||| | |||||||||||||||||||||||||||| |||||| Sbjct: 566 gtgggaacgacagaacctatgactgcataggattttattgaaaagaatcctaatacttca 625 Query: 361 ttgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt-----tataa 415 |||||||||||||||||||||||| ||| ||||||||||||| | ||||| Sbjct: 626 ttgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttataatataa 685 Query: 416 attaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaa 475 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 686 attaacaaataagacaggaaagagtaaatattcgcccgcgaaatctttattgaattagaa 745 Query: 476 tactttaccgcgattcaataagagtaaaaataaggatatttttt----agaaggactaca 531 ||||||||||||||||||||||||| |||||||||| ||||||| |||| || |||| Sbjct: 746 tactttaccgcgattcaataagagt-aaaataaggagattttttgttaagaaagattaca 804 Query: 532 ttattatctataaatatagaatttagataaatatccacacacatctggatatattctaga 591 |||||||||||||||||| |||||||||| ||||||||||| ||||||||||||| Sbjct: 805 ----tatctataaatatagaatatagataaatagacacacacatctagatatattctaga 860 Query: 592 tcttcttttttgactatatat 612 |||||||| |||||||||||| Sbjct: 861 tcttctttcttgactatatat 881
>gb|U54747.1|SLU54747 Schizostachyum luzonicum ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1065 Score = 686 bits (346), Expect = 0.0 Identities = 554/621 (89%), Gaps = 16/621 (2%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||| Sbjct: 244 agcaaaactaaagggatgtggataaaaggagggatgatagaaagaaagaagaggaa-taa 302 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| ||| || | |||||||||||||| ||||||||||||||||||||||| Sbjct: 303 gaaagatataggatttcaatatgtatggtctatgagttacatcataaaaggcaatgtgat 362 Query: 122 aaagcatcaatataataaaac-taatagagaatgaaaaattgtaacttgaaagaagaact 180 |||||||||||| || |||| ||| ||||||| |||| ||||||||||| ||||| | Sbjct: 363 aaagcatcaataaaaaaaaaaataacagagaattcgaaatcgtaacttgaaacaagaaat 422 Query: 181 acaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcg 240 |||||||| || |||||||||||||| ||||||||||||||||||||||||||| ||||| Sbjct: 423 acaaatttaaaacaataataaagagcggcccgggttaataaaactgagaaaattgactcg 482 Query: 241 gaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagca 300 ||||||||||||||||||||||| ||| ||||||||||||||| |||| ||||||||| | Sbjct: 483 gaaagaaattttttggaagctccattgtgggattcagacctaatcattaaaggagaagta 542 Query: 301 gtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttca 360 |||||||||||||||||||||| | |||||||||||||||||||||||||||| |||||| Sbjct: 543 gtgggaacgacagaacctatgactgcataggattttattgaaaagaatcctaatacttca 602 Query: 361 ttgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt-----tataa 415 |||||||||||||||||||||||| ||| ||||||||||||| | ||||| Sbjct: 603 ttgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttataatataa 662 Query: 416 attaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaa 475 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 663 attaacaaataagacaggaaagagtaaatattcgcccgcgaaatctttattgaattagaa 722 Query: 476 tactttaccgcgattcaataagagtaaaaataaggatatttttt----agaaggactaca 531 ||||||||||||||||||||||||| |||||||||| ||||||| |||| || |||| Sbjct: 723 tactttaccgcgattcaataagagt-aaaataaggagattttttgttaagaaagattaca 781 Query: 532 ttattatctataaatatagaatttagataaatatccacacacatctggatatattctaga 591 |||||||||||||||||| |||||||||| ||||||||||| ||||||||||||| Sbjct: 782 ----tatctataaatatagaatatagataaatagacacacacatctagatatattctaga 837 Query: 592 tcttcttttttgactatatat 612 |||||||| |||||||||||| Sbjct: 838 tcttctttcttgactatatat 858
>gb|AY912205.1| Greslania rivularis ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1228 Score = 676 bits (341), Expect = 0.0 Identities = 551/620 (88%), Gaps = 15/620 (2%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||| ||||||||||||| |||| |||||||||||||| ||||||||| ||| Sbjct: 250 agcaaaactaaaaggatgtggataaaaggagagatgatagaaagaaagaagaggaa-taa 308 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| | |||||||||||||| ||||||||||||||||||||||| Sbjct: 309 gaaagatataggattccaatatgtatggtctatgagttacatcataaaaggcaatgtgat 368 Query: 122 aaagcatcaatataataaaactaatagagaatgaaaaattgtaacttgaaagaagaacta 181 |||||||||||| || ||| ||| ||||||| |||| ||||||||||| ||||| || Sbjct: 369 aaagcatcaataaaaaaaa--taacagagaattcgaaatcgtaacttgaaacaagaaata 426 Query: 182 caaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcgg 241 ||||||| || |||||||||||||| ||||||||||||||||||||||||||| |||||| Sbjct: 427 caaatttaaaacaataataaagagcggcccgggttaataaaactgagaaaattgactcgg 486 Query: 242 aaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcag 301 |||||||||||||||||||||| ||| ||||||||||||||| |||| ||||||||| || Sbjct: 487 aaagaaattttttggaagctccattgtgggattcagacctaatcattaaaggagaagtag 546 Query: 302 tgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttcat 361 ||||||||||||||||||||| | |||||||||||||||||||||||||||| |||| || Sbjct: 547 tgggaacgacagaacctatgactgcataggattttattgaaaagaatcctaatactttat 606 Query: 362 tgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt-----tataaa 416 ||||||||||||||||||||||| ||| |||||||| |||| | |||||| Sbjct: 607 tgggtgggatggcggaacaaaccaaaaaaattgccttatttgctaaggttataatataaa 666 Query: 417 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaat 476 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 667 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaatctttattgaattagaat 726 Query: 477 actttaccgcgattcaataagagtaaaaataaggatatttttt----agaaggactacat 532 |||||| |||||||||||||||||||||||||||| ||||||| |||| || ||| Sbjct: 727 actttatcgcgattcaataagagtaaaaataaggagattttttgttaagaaagattac-- 784 Query: 533 tattatctataaatatagaatttagataaatatccacacacatctggatatattctagat 592 |||||||||||||||||||| |||||||||| ||||||||||| |||||||||||||| Sbjct: 785 -attatctataaatatagaatatagataaatagacacacacatctagatatattctagat 843 Query: 593 cttcttttttgactatatat 612 ||||||| |||||||||||| Sbjct: 844 cttctttcttgactatatat 863
>gb|AF133460.1|AF133460 Streptogyna americana ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1228 Score = 674 bits (340), Expect = 0.0 Identities = 454/493 (92%), Gaps = 1/493 (0%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 266 agcaaaactaaagggatgtggataaaaggagggatgatagaaagaaggaagaggaa-taa 324 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| | |||||||||||||||||||||||||||||||||||||| Sbjct: 325 gaaagatataggattccaatatgtatggtctatgaattacatcataaaaggcaatgtgat 384 Query: 122 aaagcatcaatataataaaactaatagagaatgaaaaattgtaacttgaaagaagaacta 181 ||||||||||||||| |||| ||| ||||||| |||| ||||||||||| ||||| || Sbjct: 385 aaagcatcaatataaaaaaaataacagagaattcgaaatcgtaacttgaaacaagaaata 444 Query: 182 caaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcgg 241 |||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||| Sbjct: 445 aaaattttaagcaataataaagagcggcccgggttaataaaactgataaaattgactcgg 504 Query: 242 aaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcag 301 |||||||||||||||||||||| |||||||||||| ||||||||||| |||||||||||| Sbjct: 505 aaagaaattttttggaagctccattgcgggattcaaacctaaccattaaaggagaagcag 564 Query: 302 tgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttcat 361 ||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||| Sbjct: 565 tgggaacgacagaacctatgactgcataggattttattgaaaagaatcctaatacttcat 624 Query: 362 tgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaac 421 ||||||||||||||||||||||| ||| ||||||||||||| |||| ||||||| Sbjct: 625 tgggtgggatggcggaacaaaccaaaaaaattggcttatttggtaaggttatgaattaac 684 Query: 422 aaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaatacttt 481 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 685 aaataagacaggaaagagtaaatattcgcccgcgaaatctttattgaattagaatacttt 744 Query: 482 accgcgattcaat 494 ||||||||||||| Sbjct: 745 accgcgattcaat 757 Score = 93.7 bits (47), Expect = 6e-16 Identities = 65/71 (91%) Strand = Plus / Plus Query: 542 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 601 |||||||||||| |||||||||| ||||||||||| || |||||||||||||||||| | Sbjct: 813 taaatatagaatatagataaataaacacacacatctagacatattctagatcttctttct 872 Query: 602 tgactatatat 612 ||||||||||| Sbjct: 873 tgactatatat 883
>gb|AF133487.1|AF133487 Puelia olyriformis ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1217 Score = 670 bits (338), Expect = 0.0 Identities = 469/515 (91%), Gaps = 5/515 (0%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaa---- 57 ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 262 agcaaaaataaagggatgtggataaaaggagggatgatagaaagaaggaagaggaagagg 321 Query: 58 -ataaataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaat 116 |||| ||||||||| |||||| | |||||||||||||||||| ||||||||||||||| Sbjct: 322 aataagaaagatataggattccaatatgtatggtctatgaattatatcataaaaggcaat 381 Query: 117 gtgaaaaagcatcaatataataaaactaatagagaatgaaaaattgtaacttgaaagaag 176 |||| |||||||||||||||||||| ||| |||||| |||| ||||||||||| ||| Sbjct: 382 gtgataaagcatcaatataataaaaataactgagaattcgaaatcgtaacttgaaacaag 441 Query: 177 aactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaa 236 || || |||||| ||||||||||||||||| ||||||||||||||||||||||||||| | Sbjct: 442 aaataaaaatttaaagcaataataaagagcggcccgggttaataaaactgagaaaattga 501 Query: 237 ctcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggaga 296 ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 502 ctcggaaagaaattttttggaagctccattgcgggattcagacctaaccattaaaggaga 561 Query: 297 agcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacac 356 |||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 562 agcagtgggaacgacagaacctatgactgcataggattttattgaaaagaatcctaacac 621 Query: 357 ttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaa 416 |||||||||||||||||||||||||||| | | |||||||||||| |||| || Sbjct: 622 ttcattgggtgggatggcggaacaaaccaaaaaaatagctttatttggtaaggttatgaa 681 Query: 417 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaat 476 ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| Sbjct: 682 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaatctttattggattagaat 741 Query: 477 actttaccgcgattcaataagagtaaaaataagga 511 ||||||||||||||||||||||||||||||||||| Sbjct: 742 actttaccgcgattcaataagagtaaaaataagga 776 Score = 83.8 bits (42), Expect = 6e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 555 tagataaatatccacacacatctggatatattctagatcttcttttttgactatatat 612 |||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||| Sbjct: 819 tagataaatagacacacacatctagatatattctagatcttctttcttgactatatat 876
>gb|AY912210.1| Nastus productus ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1067 Score = 652 bits (329), Expect = 0.0 Identities = 467/514 (90%), Gaps = 6/514 (1%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||| Sbjct: 239 agcaaaactaaagggatgtggataaaaggagggatgatagaaagaaagaagaggaa-taa 297 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| | |||||||||||||| ||||||||||||||||||||||| Sbjct: 298 gaaagatataggattccaatatgtatggtctatgagttacatcataaaaggcaatgtgat 357 Query: 122 aaagcatcaatataataaaactaatagagaatgaaaaattgtaacttgaaagaagaacta 181 |||||||||||||||||||| ||| ||||||| |||| ||||||||||| ||||| || Sbjct: 358 aaagcatcaatataataaaaataacagagaattcgaaatcgtaacttgaaacaagaaata 417 Query: 182 caaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcgg 241 ||||||| || |||||||||||||| |||| |||||||||||||||||||||| |||||| Sbjct: 418 caaatttaaaacaataataaagagcggcccaggttaataaaactgagaaaattgactcgg 477 Query: 242 aaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcag 301 |||||||||||||||||||||| ||| ||||||||||||||| |||| ||||||||| || Sbjct: 478 aaagaaattttttggaagctccattgtgggattcagacctaatcattaaaggagaagtag 537 Query: 302 tgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttcat 361 ||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||| Sbjct: 538 tgggaacgacagaacctatgactgcataggattttattgaaaagaatcctaatacttcat 597 Query: 362 tgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt-----tataaa 416 ||||||||||||||||||||||| ||| ||||||||||||| | |||||| Sbjct: 598 tgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttataatataaa 657 Query: 417 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaat 476 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 658 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaatctttattgaattagaat 717 Query: 477 actttaccgcgattcaataagagtaaaaataagg 510 |||||||||||||||||||||||||||||||||| Sbjct: 718 actttaccgcgattcaataagagtaaaaataagg 751 Score = 117 bits (59), Expect = 4e-23 Identities = 74/79 (93%) Strand = Plus / Plus Query: 534 attatctataaatatagaatttagataaatatccacacacatctggatatattctagatc 593 |||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||| Sbjct: 778 attatctataaatatagaatatagataaatagacacacacatctagatatattctagatc 837 Query: 594 ttcttttttgactatatat 612 |||||| |||||||||||| Sbjct: 838 ttctttcttgactatatat 856
>gb|AF133476.1|AF133476 Brachyelytrum erectum ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1248 Score = 634 bits (320), Expect = e-179 Identities = 452/497 (90%), Gaps = 1/497 (0%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| Sbjct: 267 agcaaaactaaagggatgtggataaagggaaggatgatagaaagaaggaagaggaa-taa 325 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 | ||||||||| |||||| | |||||||||||||||||| ||||||||||||||||||| Sbjct: 326 aaaagatataggattccaatatgtatggtctatgaattatatcataaaaggcaatgtgat 385 Query: 122 aaagcatcaatataataaaactaatagagaatgaaaaattgtaacttgaaagaagaacta 181 |||||||||||||||||||| ||| ||| ||| |||| ||||||||||| |||||||| Sbjct: 386 aaagcatcaatataataaaaataacagaaaattcgaaatcgtaacttgaaacaagaacta 445 Query: 182 caaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcgg 241 | ||||| ||||||||||||||||| | |||||||| |||||||||||||||| |||||| Sbjct: 446 ctaatttaaagcaataataaagagcggtccgggttattaaaactgagaaaatttactcgg 505 Query: 242 aaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcag 301 ||| | |||||||||||||||| |||||||||| ||||||||||||| || ||||||||| Sbjct: 506 aaatatattttttggaagctccattgcgggattgagacctaaccattaaaagagaagcag 565 Query: 302 tgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttcat 361 |||||||||||||||| |||| |||||||||||||||||||||||||||||| ||||||| Sbjct: 566 tgggaacgacagaacccatgactccataggattttattgaaaagaatcctaatacttcat 625 Query: 362 tgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaac 421 ||| ||||||||||||||||||| ||| ||||||||||||| |||||||||||| Sbjct: 626 tggatgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttataaattaac 685 Query: 422 aaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaatacttt 481 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 686 aaataagacaggaaagagtaaatattcgcccgcgaaatccttattgaattagaatacttt 745 Query: 482 accgcgattcaataaga 498 | | | ||||||||||| Sbjct: 746 aacccaattcaataaga 762 Score = 71.9 bits (36), Expect = 2e-09 Identities = 63/72 (87%) Strand = Plus / Plus Query: 541 ataaatatagaatttagataaatatccacacacatctggatatattctagatcttctttt 600 ||||||||||||| | |||||||| |||| |||| | ||||||||||| ||||||||| Sbjct: 805 ataaatatagaatatggataaatagacacaaacatttagatatattctaaatcttctttc 864 Query: 601 ttgactatatat 612 |||||||||||| Sbjct: 865 ttgactatatat 876
>gb|AY912204.1| Greslania circinata ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1170 Score = 630 bits (318), Expect = e-177 Identities = 471/523 (90%), Gaps = 6/523 (1%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||| Sbjct: 268 agcaaaactaaagggatgtggataaaaggagggatgatagaaagaaagaagaggaa-taa 326 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| | |||||||||||||| ||||||||||||||||||||||| Sbjct: 327 gaaagatataggattccaatatgtatggtctatgagttacatcataaaaggcaatgtgat 386 Query: 122 aaagcatcaatataataaaactaatagagaatgaaaaattgtaacttgaaagaagaacta 181 ||||||||||||||| |||| ||| ||||||| |||| |||||||||| ||||| || Sbjct: 387 aaagcatcaatataaaaaaaataacagagaattcgaaatcataacttgaaacaagaaata 446 Query: 182 caaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcgg 241 ||||||| || |||||| ||||||| | ||||||||||||||||||||||||| |||||| Sbjct: 447 caaatttaaaacaataacaaagagcggaccgggttaataaaactgagaaaattgactcgg 506 Query: 242 aaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcag 301 |||||||||| ||||||||||| ||| ||||||||||||||| |||| ||||||||| || Sbjct: 507 aaagaaatttattggaagctccattgtgggattcagacctaatcattaaaggagaagtag 566 Query: 302 tgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttcat 361 ||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||| Sbjct: 567 tgggaacgacagaacctatgactgcataggattttattgaaaagaatcctaatacttcat 626 Query: 362 tgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt-----tataaa 416 ||||||||||||||||||||||| ||| ||||||||||||| | |||||| Sbjct: 627 tgggtgggatggcggaacaaaccaaaagaattgccttatttggtaaggttataatataaa 686 Query: 417 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaat 476 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 687 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaatctttattgaattagaat 746 Query: 477 actttaccgcgattcaataagagtaaaaataaggatatttttt 519 ||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 747 actttaccgcgattcaataagagtaaaaataaggagatttttt 789
>gb|AF133473.1|AF133473 Otatea acuminata ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1185 Score = 630 bits (318), Expect = e-177 Identities = 453/499 (90%), Gaps = 6/499 (1%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||| Sbjct: 261 agcaaaactaaagggatgtggataaaaggagggatgatagaaagaaagaagaggaa-taa 319 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| | |||||||||||||||||||||||||||||||||||||| Sbjct: 320 gaaagatataggattccaatatgtatggtctatgaattacatcataaaaggcaatgtgat 379 Query: 122 aaagcatcaatataataaaactaatagagaatgaaaaattgtaacttgaaagaagaacta 181 |||||||||||||||||||| ||| ||||||| |||| |||||| |||| ||||| || Sbjct: 380 aaagcatcaatataataaaaataacagagaattcgaaatcgtaactcgaaacaagaaata 439 Query: 182 caaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcgg 241 ||||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||| || Sbjct: 440 caaatttgaagcaataataaagagcggcccgggttaataaaactgagaaaattgacttgg 499 Query: 242 aaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcag 301 |||||||||||||||||||||| ||| || ||||||||||||||||| ||||||||| || Sbjct: 500 aaagaaattttttggaagctccattgtggaattcagacctaaccattaaaggagaagtag 559 Query: 302 tgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttcat 361 ||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||| Sbjct: 560 tgggaacgacagaacctatgactgcataggattttattgaaaagaatcctaatacttcat 619 Query: 362 tgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt-----tataaa 416 ||||||||||||||||||||||| ||| ||||||||||||| | |||||| Sbjct: 620 tgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttataatataaa 679 Query: 417 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaat 476 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 680 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaatctttattgaattagaat 739 Query: 477 actttaccgcgattcaata 495 ||||||||||||||||||| Sbjct: 740 actttaccgcgattcaata 758 Score = 113 bits (57), Expect = 7e-22 Identities = 72/77 (93%) Strand = Plus / Plus Query: 536 tatctataaatatagaatttagataaatatccacacacatctggatatattctagatctt 595 |||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||| Sbjct: 757 tatctataaatatagaatatagataaatagacacacacatctagatatattctagatctt 816 Query: 596 cttttttgactatatat 612 |||| |||||||||||| Sbjct: 817 ctttcttgactatatat 833
>gb|U54749.1|OAU54749 Otatea acuminata ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1025 Score = 630 bits (318), Expect = e-177 Identities = 453/499 (90%), Gaps = 6/499 (1%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||| Sbjct: 238 agcaaaactaaagggatgtggataaaaggagggatgatagaaagaaagaagaggaa-taa 296 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| | |||||||||||||||||||||||||||||||||||||| Sbjct: 297 gaaagatataggattccaatatgtatggtctatgaattacatcataaaaggcaatgtgat 356 Query: 122 aaagcatcaatataataaaactaatagagaatgaaaaattgtaacttgaaagaagaacta 181 |||||||||||||||||||| ||| ||||||| |||| |||||| |||| ||||| || Sbjct: 357 aaagcatcaatataataaaaataacagagaattcgaaatcgtaactcgaaacaagaaata 416 Query: 182 caaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcgg 241 ||||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||| || Sbjct: 417 caaatttgaagcaataataaagagcggcccgggttaataaaactgagaaaattgacttgg 476 Query: 242 aaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcag 301 |||||||||||||||||||||| ||| || ||||||||||||||||| ||||||||| || Sbjct: 477 aaagaaattttttggaagctccattgtggaattcagacctaaccattaaaggagaagtag 536 Query: 302 tgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttcat 361 ||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||| Sbjct: 537 tgggaacgacagaacctatgactgcataggattttattgaaaagaatcctaatacttcat 596 Query: 362 tgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt-----tataaa 416 ||||||||||||||||||||||| ||| ||||||||||||| | |||||| Sbjct: 597 tgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttataatataaa 656 Query: 417 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaat 476 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 657 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaatctttattgaattagaat 716 Query: 477 actttaccgcgattcaata 495 ||||||||||||||||||| Sbjct: 717 actttaccgcgattcaata 735 Score = 113 bits (57), Expect = 7e-22 Identities = 72/77 (93%) Strand = Plus / Plus Query: 536 tatctataaatatagaatttagataaatatccacacacatctggatatattctagatctt 595 |||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||| Sbjct: 734 tatctataaatatagaatatagataaatagacacacacatctagatatattctagatctt 793 Query: 596 cttttttgactatatat 612 |||| |||||||||||| Sbjct: 794 ctttcttgactatatat 810
>gb|AF133475.1|AF133475 Avena sativa ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1187 Score = 622 bits (314), Expect = e-175 Identities = 537/611 (87%), Gaps = 22/611 (3%) Strand = Plus / Plus Query: 5 aaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataaata 64 ||||||||||||||| ||||||||||||||||||||||||||| ||||||| | ||| || Sbjct: 217 aaaactaaagggatgcggataaagggagggatgatagaaagaaagaagagggattaagta 276 Query: 65 agatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaaaaa 124 |||||||| |||||| | ||||||||||||||||| |||||||||| ||||||||| ||| Sbjct: 277 agatataggattccaatatgtatggtctatgaattgcatcataaaaagcaatgtgataaa 336 Query: 125 gcatcaatataataaaactaatagagaatgaaaaat-----tgtaacttgaaagaagaac 179 ||||||||||||||||| |||||||||| | |||| ||||||||||| |||||| Sbjct: 337 gcatcaatataataaaaaaaatagagaattagaaatcgtaacgtaacttgaaacaagaac 396 Query: 180 tacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactc 239 || |||||| |||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 397 tagaaatttaaagcaataataaagagccatcctggttaataaaactgagaaaattaactg 456 Query: 240 ggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagc 299 |||||||||||||||||||||||| ||| || ||||||||||||||||||||||||| || Sbjct: 457 ggaaagaaattttttggaagctccattgtggaattcagacctaaccattcaaggagaggc 516 Query: 300 agtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttc 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 517 agtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaatacttc 576 Query: 360 attgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaatta 419 ||||||| ||||||||||||||||| || |||||||||||||| |||||||||| Sbjct: 577 attgggtaggatggcggaacaaaccaaaaaaattttcttatttggtaaggttataaatta 636 Query: 420 acaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaatact 479 ||||||||||||| |||||||||||||||||||||||||| ||| | |||||||||||| Sbjct: 637 acaaataagacagaaaagagtaaatattcgcccgcgaaatccttttaaaattagaatact 696 Query: 480 ttaccgcga------ttcaataagagtaaaaataaggatattttttagaaggactacatt 533 ||||| | |||||||||||||||||||| |||||||| |||| ||| Sbjct: 697 ttaccattaccattattcaataagagtaaaaataaagatatttt----aagg-----att 747 Query: 534 attatctataa-atatagaatttagataa-atatccacacacatctggatatattctaga 591 | | ||||||| ||||||||||||||||| ||| ||||||||||| ||||||||||||| Sbjct: 748 actctctataaaatatagaatttagataatatagacacacacatctagatatattctaga 807 Query: 592 tcttctttttt 602 ||||||||||| Sbjct: 808 tcttctttttt 818 Score = 73.8 bits (37), Expect = 6e-10 Identities = 64/71 (90%), Gaps = 4/71 (5%) Strand = Plus / Plus Query: 543 aaatatagaatttagataa-atatccacacacatctggatatattctagatcttcttttt 601 ||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||| Sbjct: 758 aaatatagaatttagataatatagacacacacatctagatatattctagatcttcttttt 817 Query: 602 t---gactata 609 | ||||||| Sbjct: 818 ttttgactata 828
>gb|AY912201.1| Cathariostachys capitata ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1202 Score = 620 bits (313), Expect = e-174 Identities = 543/620 (87%), Gaps = 13/620 (2%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||| Sbjct: 243 agcaaaactaaagggatgtggataaaaggagggatgatagaaagaaagaagaggaa-taa 301 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| | ||||||| |||||| ||||||||||||| ||||||||| Sbjct: 302 gaaagatataggattccaatatgtatggcctatgagttacatcataaaaagcaatgtgat 361 Query: 122 aaagcatcaatataataaaactaatagagaatgaaaaattgtaacttgaaagaagaacta 181 |||||||||||||||||||| | | |||| || |||| ||||||||||| ||||| | Sbjct: 362 aaagcatcaatataataaaaatcacagagcattcgaaatcgtaacttgaaacaagaaatc 421 Query: 182 caaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcgg 241 ||||||| ||||||||||||||||| ||||||||||||||| ||||||||||| |||||| Sbjct: 422 caaatttaaagcaataataaagagcggcccgggttaataaacctgagaaaattgactcgg 481 Query: 242 aaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcag 301 |||||||||||||||||||||| ||| |||||||||||||| ||||| ||||||||| || Sbjct: 482 aaagaaattttttggaagctccattgtgggattcagacctatccattaaaggagaagtag 541 Query: 302 tgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttcat 361 |||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||| Sbjct: 542 tgggaacgacagaacctatgcctgcataggattttattgaaaagaatcctaatacttcat 601 Query: 362 tgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt-----tataaa 416 |||||||||||||||||||| || ||| |||||||| |||| | |||| | Sbjct: 602 tgggtgggatggcggaacaanccaaaataattgccttatttgataaggttatgatataga 661 Query: 417 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaat 476 ||||||||| |||||||| |||||| ||||||||||||||||| ||||||||||||||| Sbjct: 662 ttaacaaatgagacaggagagagtagatattcgcccgcgaaatctttattgaattagaat 721 Query: 477 actttaccgcgattcaataagagtaaaaataaggatatttttt----agaaggactacat 532 |||| |||||||||||| |||||||||||||||| ||||||| |||| || ||| Sbjct: 722 acttgcccgcgattcaatcagagtaaaaataaggagattttttgttaagaaagattac-- 779 Query: 533 tattatctataaatatagaatttagataaatatccacacacatctggatatattctagat 592 |||||||||||||||||||| |||||||||| | ||||||||| |||||||||||||| Sbjct: 780 -attatctataaatatagaatatagataaatagacccacacatctagatatattctagat 838 Query: 593 cttcttttttgactatatat 612 ||||||| |||||||||||| Sbjct: 839 cttctttcttgactatatat 858
>gb|AF133474.1|AF133474 Poa pratensis ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1097 Score = 618 bits (312), Expect = e-174 Identities = 459/511 (89%), Gaps = 7/511 (1%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 273 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaattaa 332 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 |||||||||| |||||| | ||||||||||||||||| |||||||||| |||||||| Sbjct: 333 gtaagatataggattccaatatgtatggtctatgaattgcatcataaaaaacaatgtgat 392 Query: 122 aaagcatcaatataataaaactaatagagaatgaaaaattgtaacttgaaagaagaacta 181 |||||||||||||||||||||||||||||||| | |||| ||||||||||| ||||||| Sbjct: 393 aaagcatcaatataataaaactaatagagaattagaaatcgtaacttgaaaaaagaactc 452 Query: 182 caaattttaagcaataataaaga-------gccgcccgggttaataaaactgagaaaatt 234 |||||| ||||||||||||||| |||| |||| |||||||||||||||||||| Sbjct: 453 taaatttaaagcaataataaagaataaagagccgaccggattaataaaactgagaaaatt 512 Query: 235 aactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaagga 294 |||||||||||| ||||||| |||||||| ||| || ||| ||||||||||||||||| Sbjct: 513 aactcggaaagatatttttttgaagctccattgtggaattagaacctaaccattcaagga 572 Query: 295 gaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaac 354 ||||||||||||||||| |||||||||||| ||||||||||||| |||| |||||||| Sbjct: 573 gaagcagtgggaacgacggaacctatgatttaataggattttatttaaaaaaatcctaat 632 Query: 355 acttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttata 414 ||||||||||||||||||||||| |||||| ||||||||||||||||| ||||| Sbjct: 633 acttcattgggtgggatggcggagcaaaccaaaaaaattgtcttatttggtaaggttata 692 Query: 415 aattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattaga 474 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 693 aattaacaaataagacaggaaagagtaaatattcgcccgcgaaatccttattgaattaga 752 Query: 475 atactttaccgcgattcaataagagtaaaaa 505 |||||||||| |||||||||||||||||| Sbjct: 753 atactttaccattattcaataagagtaaaaa 783
>gb|AF133492.1|AF133492 Humbertochloa greenwayi ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1218 Score = 593 bits (299), Expect = e-166 Identities = 453/505 (89%), Gaps = 5/505 (0%) Strand = Plus / Plus Query: 4 caaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataaat 63 |||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| Sbjct: 266 caaaactaaagggatgtggataaaaggagggatgatagaaagaaggaagag-aaataaga 324 Query: 64 aagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaaaa 123 ||||||||| |||||| | |||||||||||||||||||||||||||||||||||||| || Sbjct: 325 aagatataggattccaatatgtatggtctatgaattacatcataaaaggcaatgtgataa 384 Query: 124 agcatcaatataataaaactaatagagaatgaaaaattgtaa----cttgaaagaagaac 179 |||||||||||||||||| || ||||||| ||||| |||| |||||| ||||| Sbjct: 385 agcatcaatataataaaaatagcagagaattcaaaatcgtaatttgattgaaacaagaaa 444 Query: 180 tacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactc 239 |||||||| |||||||||| ||||||| |||||||||||||||||||||||||| |||| Sbjct: 445 tacaaattctaagcaataacaaagagcagcccgggttaataaaactgagaaaatggactc 504 Query: 240 ggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagc 299 ||||||| |||||||||||||||| ||||| |||||| ||||||||||| |||||||||| Sbjct: 505 ggaaagatattttttggaagctccattgcgagattcaaacctaaccattaaaggagaagc 564 Query: 300 agtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttc 359 |||||||||||||||||||||| | |||||||||| ||||||| |||||||| ||||| Sbjct: 565 tgtgggaacgacagaacctatgactggataggatttttttgaaaacaatcctaatacttc 624 Query: 360 attgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaatta 419 ||||||||||||||||||||||||| ||| |||||||| |||| |||| ||||| Sbjct: 625 attgggtgggatggcggaacaaaccaaaaaagttgccttatttgataaggttatgaatta 684 Query: 420 acaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaatact 479 |||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| Sbjct: 685 acaaataagacaggaaagagtaaatattcgcccgcgaaatctttattgaattagagtact 744 Query: 480 ttaccgcgattcaataagagtaaaa 504 ||||||||||||||||||||||||| Sbjct: 745 ttaccgcgattcaataagagtaaaa 769 Score = 79.8 bits (40), Expect = 1e-11 Identities = 61/68 (89%) Strand = Plus / Plus Query: 542 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 601 |||||||||||| |||||||||| ||||||||||| ||||||||||||||| ||||| | Sbjct: 811 taaatatagaatatagataaataaacacacacatctagatatattctagatcgtctttct 870 Query: 602 tgactata 609 || ||||| Sbjct: 871 tggctata 878
>gb|DQ289157.1| Oryza punctata J ribosomal protein L16 (rpl16) gene, partial cds; chloroplast Length = 1116 Score = 581 bits (293), Expect = e-162 Identities = 454/507 (89%), Gaps = 6/507 (1%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| ||| |||||||||||||||||||||| |||||| Sbjct: 262 agcaaaactaaagggatgtggataaaaggaaggatgatagaaagaaggaagag-aaataa 320 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| | |||||||||||||||||||||||||||| ||||||||| Sbjct: 321 gaaagatataggattccaatatgtatggtctatgaattacatcataaaaagcaatgtgat 380 Query: 122 aaagcatcaatataataaaactaatagagaatgaaaaattgtaacttga----aagaaga 177 |||||||||||||||||||| ||| ||||||| |||| |||| |||| || |||| Sbjct: 381 aaagcatcaatataataaaaataacagagaattcgaaatcgtaatttgattgaaacaaga 440 Query: 178 actacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaac 237 | ||||||||| ||| ||||| ||||||| |||| |||||||||||||||||| || || Sbjct: 441 aatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactgagaaa-ttgac 499 Query: 238 tcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaa 297 |||||||||||||||||||||||||| ||||| |||||| ||||||||||| |||||||| Sbjct: 500 tcggaaagaaattttttggaagctccattgcgagattcaaacctaaccattaaaggagaa 559 Query: 298 gcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacact 357 ||||||||||||||||||||||||| | |||||||||| ||||||||||||| || ||| Sbjct: 560 gcagtgggaacgacagaacctatgactggataggattttcttgaaaagaatcccaatact 619 Query: 358 tcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaat 417 ||||||||||||||||||||||||||| ||| |||||||| |||| |||| ||| Sbjct: 620 tcattgggtgggatggcggaacaaaccaaaaaaattgccttatttgataaggttatgaat 679 Query: 418 taacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaata 477 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 680 taacaaataagacaggaaagagtaaatattcgcccgcgaaatttttattgaattagaata 739 Query: 478 ctttaccgcgattcaataagagtaaaa 504 ||||||||||||||||||||||||||| Sbjct: 740 ctttaccgcgattcaataagagtaaaa 766 Score = 77.8 bits (39), Expect = 4e-11 Identities = 63/71 (88%) Strand = Plus / Plus Query: 542 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 601 |||||||||||| |||||||||| | |||||||| ||||||||||||||| ||||| | Sbjct: 804 taaatatagaatatagataaataaagatacacatctagatatattctagatcctctttct 863 Query: 602 tgactatatat 612 ||||||||||| Sbjct: 864 tgactatatat 874
>gb|DQ289156.1| Oryza grandiglumis I ribosomal protein L16 (rpl16) gene, partial cds; chloroplast Length = 1117 Score = 581 bits (293), Expect = e-162 Identities = 454/507 (89%), Gaps = 6/507 (1%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| ||| |||||||||||||||||||||| |||||| Sbjct: 262 agcaaaactaaagggatgtggataaaaggaaggatgatagaaagaaggaagag-aaataa 320 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| | |||||||||||||||||||||||||||| ||||||||| Sbjct: 321 gaaagatataggattccaatatgtatggtctatgaattacatcataaaaagcaatgtgat 380 Query: 122 aaagcatcaatataataaaactaatagagaatgaaaaattgtaacttga----aagaaga 177 |||||||||||||||||||| ||| ||||||| |||| |||| |||| || |||| Sbjct: 381 aaagcatcaatataataaaaataacagagaattcgaaatcgtaatttgattgaaacaaga 440 Query: 178 actacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaac 237 | ||||||||| ||| ||||| ||||||| |||| |||||||||||||||||| || || Sbjct: 441 aatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactgagaaa-ttgac 499 Query: 238 tcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaa 297 |||||||||||||||||||||||||| ||||| |||||| ||||||||||| |||||||| Sbjct: 500 tcggaaagaaattttttggaagctccattgcgagattcaaacctaaccattaaaggagaa 559 Query: 298 gcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacact 357 ||||||||||||||||||||||||| | |||||||||| ||||||||||||| || ||| Sbjct: 560 gcagtgggaacgacagaacctatgactggataggattttcttgaaaagaatcccaatact 619 Query: 358 tcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaat 417 ||||||||||||||||||||||||||| ||| |||||||| |||| |||| ||| Sbjct: 620 tcattgggtgggatggcggaacaaaccaaaaaaattgccttatttgataaggttatgaat 679 Query: 418 taacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaata 477 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 680 taacaaataagacaggaaagagtaaatattcgcccgcgaaatttttattgaattagaata 739 Query: 478 ctttaccgcgattcaataagagtaaaa 504 ||||||||||||||||||||||||||| Sbjct: 740 ctttaccgcgattcaataagagtaaaa 766 Score = 85.7 bits (43), Expect = 2e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 542 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 601 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 805 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 864 Query: 602 tgactatatat 612 ||||||||||| Sbjct: 865 tgactatatat 875
>gb|DQ289155.1| Oryza latifolia H ribosomal protein L16 (rpl16) gene, partial cds; chloroplast Length = 1118 Score = 581 bits (293), Expect = e-162 Identities = 454/507 (89%), Gaps = 6/507 (1%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| ||| |||||||||||||||||||||| |||||| Sbjct: 261 agcaaaactaaagggatgtggataaaaggaaggatgatagaaagaaggaagag-aaataa 319 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| | |||||||||||||||||||||||||||| ||||||||| Sbjct: 320 gaaagatataggattccaatatgtatggtctatgaattacatcataaaaagcaatgtgat 379 Query: 122 aaagcatcaatataataaaactaatagagaatgaaaaattgtaacttga----aagaaga 177 |||||||||||||||||||| ||| ||||||| |||| |||| |||| || |||| Sbjct: 380 aaagcatcaatataataaaaataacagagaattcgaaatcgtaatttgattgaaacaaga 439 Query: 178 actacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaac 237 | ||||||||| ||| ||||| ||||||| |||| |||||||||||||||||| || || Sbjct: 440 aatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactgagaaa-ttgac 498 Query: 238 tcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaa 297 |||||||||||||||||||||||||| ||||| |||||| ||||||||||| |||||||| Sbjct: 499 tcggaaagaaattttttggaagctccattgcgagattcaaacctaaccattaaaggagaa 558 Query: 298 gcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacact 357 ||||||||||||||||||||||||| | |||||||||| ||||||||||||| || ||| Sbjct: 559 gcagtgggaacgacagaacctatgactggataggattttcttgaaaagaatcccaatact 618 Query: 358 tcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaat 417 ||||||||||||||||||||||||||| ||| |||||||| |||| |||| ||| Sbjct: 619 tcattgggtgggatggcggaacaaaccaaaaaaattgccttatttgataaggttatgaat 678 Query: 418 taacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaata 477 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 679 taacaaataagacaggaaagagtaaatattcgcccgcgaaatttttattgaattagaata 738 Query: 478 ctttaccgcgattcaataagagtaaaa 504 ||||||||||||||||||||||||||| Sbjct: 739 ctttaccgcgattcaataagagtaaaa 765 Score = 85.7 bits (43), Expect = 2e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 542 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 601 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 806 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 865 Query: 602 tgactatatat 612 ||||||||||| Sbjct: 866 tgactatatat 876
>gb|DQ289154.1| Oryza officinalis G ribosomal protein L16 (rpl16) gene, partial cds; chloroplast Length = 1118 Score = 581 bits (293), Expect = e-162 Identities = 454/507 (89%), Gaps = 6/507 (1%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| ||| |||||||||||||||||||||| |||||| Sbjct: 262 agcaaaactaaagggatgtggataaaaggaaggatgatagaaagaaggaagag-aaataa 320 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| | |||||||||||||||||||||||||||| ||||||||| Sbjct: 321 gaaagatataggattccaatatgtatggtctatgaattacatcataaaaagcaatgtgat 380 Query: 122 aaagcatcaatataataaaactaatagagaatgaaaaattgtaacttga----aagaaga 177 |||||||||||||||||||| ||| ||||||| |||| |||| |||| || |||| Sbjct: 381 aaagcatcaatataataaaaataacagagaattcgaaatcgtaatttgattgaaacaaga 440 Query: 178 actacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaac 237 | ||||||||| ||| ||||| ||||||| |||| |||||||||||||||||| || || Sbjct: 441 aatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactgagaaa-ttgac 499 Query: 238 tcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaa 297 |||||||||||||||||||||||||| ||||| |||||| ||||||||||| |||||||| Sbjct: 500 tcggaaagaaattttttggaagctccattgcgagattcaaacctaaccattaaaggagaa 559 Query: 298 gcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacact 357 ||||||||||||||||||||||||| | |||||||||| ||||||||||||| || ||| Sbjct: 560 gcagtgggaacgacagaacctatgactggataggattttcttgaaaagaatcccaatact 619 Query: 358 tcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaat 417 ||||||||||||||||||||||||||| ||| |||||||| |||| |||| ||| Sbjct: 620 tcattgggtgggatggcggaacaaaccaaaaaaattgccttatttgataaggttatgaat 679 Query: 418 taacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaata 477 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 680 taacaaataagacaggaaagagtaaatattcgcccgcgaaatttttattgaattagaata 739 Query: 478 ctttaccgcgattcaataagagtaaaa 504 ||||||||||||||||||||||||||| Sbjct: 740 ctttaccgcgattcaataagagtaaaa 766 Score = 85.7 bits (43), Expect = 2e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 542 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 601 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 806 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 865 Query: 602 tgactatatat 612 ||||||||||| Sbjct: 866 tgactatatat 876
>gb|AF133458.1|AF133458 Leersia virginica ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1209 Score = 581 bits (293), Expect = e-162 Identities = 454/507 (89%), Gaps = 6/507 (1%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| ||| |||||||||||||||||||||| |||||| Sbjct: 243 agcaaaactaaagggatgtggataaaaggaaggatgatagaaagaaggaagag-aaataa 301 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| | |||||||||||||||||||| ||||||| ||||||||| Sbjct: 302 gaaagatataggattccaatatgtatggtctatgaattacaccataaaaagcaatgtgat 361 Query: 122 aaagcatcaatataataaaactaatagagaatgaaaaattgtaacttga----aagaaga 177 |||||||||||||||||||| ||| ||||||| |||| |||| |||| || |||| Sbjct: 362 aaagcatcaatataataaaaataacagagaattcgaaatcgtaatttgattgaaacaaga 421 Query: 178 actacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaac 237 | ||||||||| ||||||||| ||||||| ||||||||||||||||||||||| || || Sbjct: 422 aatacaaatttcaagcaataacaaagagcgtcccgggttaataaaactgagaaa-ttgac 480 Query: 238 tcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaa 297 |||||||||||||||||||||||||| ||||| |||||| ||||||||||| |||||||| Sbjct: 481 tcggaaagaaattttttggaagctccattgcgagattcaaacctaaccattaaaggagaa 540 Query: 298 gcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacact 357 ||||||||||||||||||||||||| | |||||||||| ||||||| | ||| || ||| Sbjct: 541 gcagtgggaacgacagaacctatgactggataggattttcttgaaaaaagtcccaatact 600 Query: 358 tcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaat 417 ||||||||||||||||||||||||||| |||||||||||| |||| |||| ||| Sbjct: 601 tcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgataaggttatgaat 660 Query: 418 taacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaata 477 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 661 taacaaataagacaggaaagagtaaatattcgcccgcgaaatttttattgaattagaata 720 Query: 478 ctttaccgcgattcaataagagtaaaa 504 ||||||||||||||||||||||||||| Sbjct: 721 ctttaccgcgattcaataagagtaaaa 747 Score = 109 bits (55), Expect = 1e-20 Identities = 73/79 (92%) Strand = Plus / Plus Query: 534 attatctataaatatagaatttagataaatatccacacacatctggatatattctagatc 593 |||||||||||||||||||| |||||||||| || |||||||| ||||||||||||||| Sbjct: 787 attatctataaatatagaatatagataaataaacatacacatctagatatattctagatc 846 Query: 594 ttcttttttgactatatat 612 |||||| |||||||||||| Sbjct: 847 ttctttcttgactatatat 865
>gb|U54750.1|RPU54750 Rhipidocladum pittieri ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1010 Score = 581 bits (293), Expect = e-162 Identities = 437/486 (89%), Gaps = 6/486 (1%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||| Sbjct: 242 agcaaaactaaagggatgtggataaaaggagggatgatagaaagaaagaagaggaa-taa 300 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| | |||||||||||||||||||||||||||||||||||||| Sbjct: 301 gaaagatataggattccaatatgtatggtctatgaattacatcataaaaggcaatgtgat 360 Query: 122 aaagcatcaatataataaaactaatagagaatgaaaaattgtaacttgaaagaagaacta 181 |||||||||||||||||||| ||| || |||| |||| |||||| |||| ||||| || Sbjct: 361 aaagcatcaatataataaaaataacagcgaattcgaaatcgtaactcgaaacaagaaata 420 Query: 182 caaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcgg 241 |||||||||||||||||||||||| || ||||||||||||||||||||||| |||||| Sbjct: 421 gaaattttaagcaataataaagagcgtccggggttaataaaactgagaaaattgactcgg 480 Query: 242 aaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcag 301 |||||||||||||||||||||| ||| || ||||||||||||||||| ||||||||| || Sbjct: 481 aaagaaattttttggaagctccattgtggaattcagacctaaccattaaaggagaagtag 540 Query: 302 tgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttcat 361 ||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||| Sbjct: 541 tgggaacgacagaacctatgactgcataggattttattgaaaagaatcctaatacttcat 600 Query: 362 tgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt-----tataaa 416 ||||||||||||||||||||||| ||| ||||||||||||| | |||||| Sbjct: 601 tgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttataatataaa 660 Query: 417 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaat 476 |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 661 ttaacaaataaggcaggaaagagtaaatattcgcccgcgaaatctttattgaattagaat 720 Query: 477 acttta 482 |||||| Sbjct: 721 acttta 726 Score = 101 bits (51), Expect = 3e-18 Identities = 66/71 (92%) Strand = Plus / Plus Query: 542 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 601 |||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||| | Sbjct: 725 taaatatagaatatagataaatagacacacacatctagatatattctagatcttctttct 784 Query: 602 tgactatatat 612 ||||||||||| Sbjct: 785 tgactatatat 795
>gb|AF133485.1|AF133485 Arundo donax ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1207 Score = 573 bits (289), Expect = e-160 Identities = 464/525 (88%), Gaps = 16/525 (3%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| |||||||||||||| |||||||||| ||| ||| Sbjct: 268 agcaaaactaaagggatgtggataaaaggagggatgatagacagaaggaagaagaa-taa 326 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 327 gaaagatataggattccaatgtgtatggtctatgaattacatcataaaaggcaatgtgat 386 Query: 122 aaagcatcaatat--------aataaaactaatagagaatgaaaaattgtaacttgaaag 173 ||||||||||||| ||||||| ||| ||||||| |||| ||||||||||| Sbjct: 387 aaagcatcaatataataaaataataaaaataagagagaattcgaaatcgtaacttgaaat 446 Query: 174 aagaactacaaattttaagcaataataaa-------gagccgcccgggttaataaaactg 226 || || | |||||| ||||||||||||| |||| ||||||||||||||||||| Sbjct: 447 aaaaaatcaaaatttaaagcaataataaataataaggagcagcccgggttaataaaactg 506 Query: 227 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 286 |||||||| |||||||||||||||||||||||||||| |||| ||||||| ||||||||| Sbjct: 507 agaaaattgactcggaaagaaattttttggaagctccattgcaggattcaaacctaacca 566 Query: 287 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 346 || |||||||||| |||||||||||| ||||||||| | ||||||||||||||||||||| Sbjct: 567 ttaaaggagaagctgtgggaacgacaaaacctatgactacataggattttattgaaaaga 626 Query: 347 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 406 ||||||| |||||||||||||||||||||||||||||| ||| |||||||||| Sbjct: 627 atcctaatacttcattgggtgggatggcggaacaaaccaaaaaaattgctttatttggta 686 Query: 407 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 466 || |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 687 aggttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatctttatt 746 Query: 467 gaattagaatactttaccgcgattcaataagagtaaaaataagga 511 | |||||||||||||||| |||||||||||||||||||||||||| Sbjct: 747 ggattagaatactttaccacgattcaataagagtaaaaataagga 791 Score = 63.9 bits (32), Expect = 6e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 577 tggatatattctagatcttcttttttgactatatat 612 ||||||||||||||||||||||| |||||||||||| Sbjct: 839 tggatatattctagatcttctttcttgactatatat 874
>ref|XM_481016.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2472 Score = 567 bits (286), Expect = e-158 Identities = 454/508 (89%), Gaps = 7/508 (1%) Strand = Plus / Plus Query: 2 agcaaaactaaaggg-atgtggataaagggagggatgatagaaagaaggaagaggaaata 60 ||||||||||||||| |||| |||||| ||| |||||||||||||||||||||| ||||| Sbjct: 1953 agcaaaactaaaggggatgtagataaaaggaaggatgatagaaagaaggaagag-aaata 2011 Query: 61 aataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtga 120 | ||||||||| |||||| | |||||||||||||||||||||||||||| ||||||||| Sbjct: 2012 agaaagatataggattccaatatgtatggtctatgaattacatcataaaaagcaatgtga 2071 Query: 121 aaaagcatcaatataataaaactaatagagaatgaaaaattgtaacttga----aagaag 176 |||||||||||||||||||| ||| ||||||| |||| |||| |||| || ||| Sbjct: 2072 taaagcatcaatataataaaaataacagagaattcgaaatcgtaatttgattgaaacaag 2131 Query: 177 aactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaa 236 || ||||||||| ||| ||||| ||||||| |||| |||||||||||||||||| || | Sbjct: 2132 aaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactgagaaa-ttga 2190 Query: 237 ctcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggaga 296 ||||||||||||||||||||||||||| ||||| |||||| ||||||||||| ||||||| Sbjct: 2191 ctcggaaagaaattttttggaagctccattgcgagattcaaacctaaccattaaaggaga 2250 Query: 297 agcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacac 356 |||||||||||||||||||||||||| | |||||||||| ||||||||||||| || || Sbjct: 2251 agcagtgggaacgacagaacctatgactggataggattttcttgaaaagaatcccaatac 2310 Query: 357 ttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaa 416 |||||||||||||||||||||||||||| |||||||||||| |||| |||| || Sbjct: 2311 ttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgataaggttatgaa 2370 Query: 417 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaat 476 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 2371 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttattgaattagaat 2430 Query: 477 actttaccgcgattcaataagagtaaaa 504 |||||||||||||||||||||||||||| Sbjct: 2431 actttaccgcgattcaataagagtaaaa 2458
>ref|XM_481017.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2472 Score = 567 bits (286), Expect = e-158 Identities = 454/508 (89%), Gaps = 7/508 (1%) Strand = Plus / Plus Query: 2 agcaaaactaaaggg-atgtggataaagggagggatgatagaaagaaggaagaggaaata 60 ||||||||||||||| |||| |||||| ||| |||||||||||||||||||||| ||||| Sbjct: 1953 agcaaaactaaaggggatgtagataaaaggaaggatgatagaaagaaggaagag-aaata 2011 Query: 61 aataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtga 120 | ||||||||| |||||| | |||||||||||||||||||||||||||| ||||||||| Sbjct: 2012 agaaagatataggattccaatatgtatggtctatgaattacatcataaaaagcaatgtga 2071 Query: 121 aaaagcatcaatataataaaactaatagagaatgaaaaattgtaacttga----aagaag 176 |||||||||||||||||||| ||| ||||||| |||| |||| |||| || ||| Sbjct: 2072 taaagcatcaatataataaaaataacagagaattcgaaatcgtaatttgattgaaacaag 2131 Query: 177 aactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaa 236 || ||||||||| ||| ||||| ||||||| |||| |||||||||||||||||| || | Sbjct: 2132 aaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactgagaaa-ttga 2190 Query: 237 ctcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggaga 296 ||||||||||||||||||||||||||| ||||| |||||| ||||||||||| ||||||| Sbjct: 2191 ctcggaaagaaattttttggaagctccattgcgagattcaaacctaaccattaaaggaga 2250 Query: 297 agcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacac 356 |||||||||||||||||||||||||| | |||||||||| ||||||||||||| || || Sbjct: 2251 agcagtgggaacgacagaacctatgactggataggattttcttgaaaagaatcccaatac 2310 Query: 357 ttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaa 416 |||||||||||||||||||||||||||| |||||||||||| |||| |||| || Sbjct: 2311 ttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgataaggttatgaa 2370 Query: 417 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaat 476 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 2371 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttattgaattagaat 2430 Query: 477 actttaccgcgattcaataagagtaaaa 504 |||||||||||||||||||||||||||| Sbjct: 2431 actttaccgcgattcaataagagtaaaa 2458
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 567 bits (286), Expect = e-158 Identities = 454/508 (89%), Gaps = 7/508 (1%) Strand = Plus / Minus Query: 2 agcaaaactaaaggg-atgtggataaagggagggatgatagaaagaaggaagaggaaata 60 ||||||||||||||| |||| |||||| ||| |||||||||||||||||||||| ||||| Sbjct: 78961 agcaaaactaaaggggatgtagataaaaggaaggatgatagaaagaaggaagag-aaata 78903 Query: 61 aataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtga 120 | ||||||||| |||||| | |||||||||||||||||||||||||||| ||||||||| Sbjct: 78902 agaaagatataggattccaatatgtatggtctatgaattacatcataaaaagcaatgtga 78843 Query: 121 aaaagcatcaatataataaaactaatagagaatgaaaaattgtaacttga----aagaag 176 |||||||||||||||||||| ||| ||||||| |||| |||| |||| || ||| Sbjct: 78842 taaagcatcaatataataaaaataacagagaattcgaaatcgtaatttgattgaaacaag 78783 Query: 177 aactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaa 236 || ||||||||| ||| ||||| ||||||| |||| |||||||||||||||||| || | Sbjct: 78782 aaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactgagaaa-ttga 78724 Query: 237 ctcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggaga 296 ||||||||||||||||||||||||||| ||||| |||||| ||||||||||| ||||||| Sbjct: 78723 ctcggaaagaaattttttggaagctccattgcgagattcaaacctaaccattaaaggaga 78664 Query: 297 agcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacac 356 |||||||||||||||||||||||||| | |||||||||| ||||||||||||| || || Sbjct: 78663 agcagtgggaacgacagaacctatgactggataggattttcttgaaaagaatcccaatac 78604 Query: 357 ttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaa 416 |||||||||||||||||||||||||||| |||||||||||| |||| |||| || Sbjct: 78603 ttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgataaggttatgaa 78544 Query: 417 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaat 476 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 78543 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttattgaattagaat 78484 Query: 477 actttaccgcgattcaataagagtaaaa 504 |||||||||||||||||||||||||||| Sbjct: 78483 actttaccgcgattcaataagagtaaaa 78456 Score = 85.7 bits (43), Expect = 2e-13 Identities = 64/71 (90%) Strand = Plus / Minus Query: 542 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 601 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 78414 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 78355 Query: 602 tgactatatat 612 ||||||||||| Sbjct: 78354 tgactatatat 78344
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 567 bits (286), Expect = e-158 Identities = 454/508 (89%), Gaps = 7/508 (1%) Strand = Plus / Minus Query: 2 agcaaaactaaaggg-atgtggataaagggagggatgatagaaagaaggaagaggaaata 60 ||||||||||||||| |||| |||||| ||| |||||||||||||||||||||| ||||| Sbjct: 78961 agcaaaactaaaggggatgtagataaaaggaaggatgatagaaagaaggaagag-aaata 78903 Query: 61 aataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtga 120 | ||||||||| |||||| | |||||||||||||||||||||||||||| ||||||||| Sbjct: 78902 agaaagatataggattccaatatgtatggtctatgaattacatcataaaaagcaatgtga 78843 Query: 121 aaaagcatcaatataataaaactaatagagaatgaaaaattgtaacttga----aagaag 176 |||||||||||||||||||| ||| ||||||| |||| |||| |||| || ||| Sbjct: 78842 taaagcatcaatataataaaaataacagagaattcgaaatcgtaatttgattgaaacaag 78783 Query: 177 aactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaa 236 || ||||||||| ||| ||||| ||||||| |||| |||||||||||||||||| || | Sbjct: 78782 aaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactgagaaa-ttga 78724 Query: 237 ctcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggaga 296 ||||||||||||||||||||||||||| ||||| |||||| ||||||||||| ||||||| Sbjct: 78723 ctcggaaagaaattttttggaagctccattgcgagattcaaacctaaccattaaaggaga 78664 Query: 297 agcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacac 356 |||||||||||||||||||||||||| | |||||||||| ||||||||||||| || || Sbjct: 78663 agcagtgggaacgacagaacctatgactggataggattttcttgaaaagaatcccaatac 78604 Query: 357 ttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaa 416 |||||||||||||||||||||||||||| |||||||||||| |||| |||| || Sbjct: 78603 ttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgataaggttatgaa 78544 Query: 417 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaat 476 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 78543 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttattgaattagaat 78484 Query: 477 actttaccgcgattcaataagagtaaaa 504 |||||||||||||||||||||||||||| Sbjct: 78483 actttaccgcgattcaataagagtaaaa 78456 Score = 85.7 bits (43), Expect = 2e-13 Identities = 64/71 (90%) Strand = Plus / Minus Query: 542 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 601 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 78414 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 78355 Query: 602 tgactatatat 612 ||||||||||| Sbjct: 78354 tgactatatat 78344
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 567 bits (286), Expect = e-158 Identities = 454/508 (89%), Gaps = 7/508 (1%) Strand = Plus / Minus Query: 2 agcaaaactaaaggg-atgtggataaagggagggatgatagaaagaaggaagaggaaata 60 ||||||||||||||| |||| |||||| ||| |||||||||||||||||||||| ||||| Sbjct: 78904 agcaaaactaaaggggatgtagataaaaggaaggatgatagaaagaaggaagag-aaata 78846 Query: 61 aataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtga 120 | ||||||||| |||||| | |||||||||||||||||||||||||||| ||||||||| Sbjct: 78845 agaaagatataggattccaatatgtatggtctatgaattacatcataaaaagcaatgtga 78786 Query: 121 aaaagcatcaatataataaaactaatagagaatgaaaaattgtaacttga----aagaag 176 |||||||||||||||||||| ||| ||||||| |||| |||| |||| || ||| Sbjct: 78785 taaagcatcaatataataaaaataacagagaattcgaaatcgtaatttgattgaaacaag 78726 Query: 177 aactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaa 236 || ||||||||| ||| ||||| ||||||| |||| |||||||||||||||||| || | Sbjct: 78725 aaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactgagaaa-ttga 78667 Query: 237 ctcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggaga 296 ||||||||||||||||||||||||||| ||||| |||||| ||||||||||| ||||||| Sbjct: 78666 ctcggaaagaaattttttggaagctccattgcgagattcaaacctaaccattaaaggaga 78607 Query: 297 agcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacac 356 |||||||||||||||||||||||||| | |||||||||| ||||||||||||| || || Sbjct: 78606 agcagtgggaacgacagaacctatgactggataggattttcttgaaaagaatcccaatac 78547 Query: 357 ttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaa 416 |||||||||||||||||||||||||||| |||||||||||| |||| |||| || Sbjct: 78546 ttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgataaggttatgaa 78487 Query: 417 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaat 476 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 78486 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttattgaattagaat 78427 Query: 477 actttaccgcgattcaataagagtaaaa 504 |||||||||||||||||||||||||||| Sbjct: 78426 actttaccgcgattcaataagagtaaaa 78399 Score = 85.7 bits (43), Expect = 2e-13 Identities = 64/71 (90%) Strand = Plus / Minus Query: 542 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 601 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 78358 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 78299 Query: 602 tgactatatat 612 ||||||||||| Sbjct: 78298 tgactatatat 78288
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 567 bits (286), Expect = e-158 Identities = 454/508 (89%), Gaps = 7/508 (1%) Strand = Plus / Minus Query: 2 agcaaaactaaaggg-atgtggataaagggagggatgatagaaagaaggaagaggaaata 60 ||||||||||||||| |||| |||||| ||| |||||||||||||||||||||| ||||| Sbjct: 54967 agcaaaactaaaggggatgtagataaaaggaaggatgatagaaagaaggaagag-aaata 54909 Query: 61 aataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtga 120 | ||||||||| |||||| | |||||||||||||||||||||||||||| ||||||||| Sbjct: 54908 agaaagatataggattccaatatgtatggtctatgaattacatcataaaaagcaatgtga 54849 Query: 121 aaaagcatcaatataataaaactaatagagaatgaaaaattgtaacttga----aagaag 176 |||||||||||||||||||| ||| ||||||| |||| |||| |||| || ||| Sbjct: 54848 taaagcatcaatataataaaaataacagagaattcgaaatcgtaatttgattgaaacaag 54789 Query: 177 aactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaa 236 || ||||||||| ||| ||||| ||||||| |||| |||||||||||||||||| || | Sbjct: 54788 aaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactgagaaa-ttga 54730 Query: 237 ctcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggaga 296 ||||||||||||||||||||||||||| ||||| |||||| ||||||||||| ||||||| Sbjct: 54729 ctcggaaagaaattttttggaagctccattgcgagattcaaacctaaccattaaaggaga 54670 Query: 297 agcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacac 356 |||||||||||||||||||||||||| | |||||||||| ||||||||||||| || || Sbjct: 54669 agcagtgggaacgacagaacctatgactggataggattttcttgaaaagaatcccaatac 54610 Query: 357 ttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaa 416 |||||||||||||||||||||||||||| |||||||||||| |||| |||| || Sbjct: 54609 ttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgataaggttatgaa 54550 Query: 417 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaat 476 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 54549 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttattgaattagaat 54490 Query: 477 actttaccgcgattcaataagagtaaaa 504 |||||||||||||||||||||||||||| Sbjct: 54489 actttaccgcgattcaataagagtaaaa 54462 Score = 85.7 bits (43), Expect = 2e-13 Identities = 64/71 (90%) Strand = Plus / Minus Query: 542 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 601 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 54425 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 54366 Query: 602 tgactatatat 612 ||||||||||| Sbjct: 54365 tgactatatat 54355
>gb|AC134345.2| Oryza sativa (jpaonica cultivar-group) chromosome 5 PAC clone P0012A07, complete sequence Length = 136858 Score = 567 bits (286), Expect = e-158 Identities = 454/508 (89%), Gaps = 7/508 (1%) Strand = Plus / Minus Query: 2 agcaaaactaaaggg-atgtggataaagggagggatgatagaaagaaggaagaggaaata 60 ||||||||||||||| |||| |||||| ||| |||||||||||||||||||||| ||||| Sbjct: 127795 agcaaaactaaaggggatgtagataaaaggaaggatgatagaaagaaggaagag-aaata 127737 Query: 61 aataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtga 120 | ||||||||| |||||| | |||||||||||||||||||||||||||| ||||||||| Sbjct: 127736 agaaagatataggattccaatatgtatggtctatgaattacatcataaaaagcaatgtga 127677 Query: 121 aaaagcatcaatataataaaactaatagagaatgaaaaattgtaacttga----aagaag 176 |||||||||||||||||||| ||| ||||||| |||| |||| |||| || ||| Sbjct: 127676 taaagcatcaatataataaaaataacagagaattcgaaatcgtaatttgattgaaacaag 127617 Query: 177 aactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaa 236 || ||||||||| ||| ||||| ||||||| |||| |||||||||||||||||| || | Sbjct: 127616 aaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactgagaaa-ttga 127558 Query: 237 ctcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggaga 296 ||||||||||||||||||||||||||| ||||| |||||| ||||||||||| ||||||| Sbjct: 127557 ctcggaaagaaattttttggaagctccattgcgagattcaaacctaaccattaaaggaga 127498 Query: 297 agcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacac 356 |||||||||||||||||||||||||| | |||||||||| ||||||||||||| || || Sbjct: 127497 agcagtgggaacgacagaacctatgactggataggattttcttgaaaagaatcccaatac 127438 Query: 357 ttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaa 416 |||||||||||||||||||||||||||| |||||||||||| |||| |||| || Sbjct: 127437 ttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgataaggttatgaa 127378 Query: 417 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaat 476 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 127377 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttattgaattagaat 127318 Query: 477 actttaccgcgattcaataagagtaaaa 504 |||||||||||||||||||||||||||| Sbjct: 127317 actttaccgcgattcaataagagtaaaa 127290 Score = 85.7 bits (43), Expect = 2e-13 Identities = 64/71 (90%) Strand = Plus / Minus Query: 542 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 601 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 127253 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 127194 Query: 602 tgactatatat 612 ||||||||||| Sbjct: 127193 tgactatatat 127183
>gb|DQ289153.1| Oryza glumipatula F ribosomal protein L16 (rpl16) gene, partial cds; chloroplast Length = 1110 Score = 567 bits (286), Expect = e-158 Identities = 454/508 (89%), Gaps = 7/508 (1%) Strand = Plus / Plus Query: 2 agcaaaactaaaggg-atgtggataaagggagggatgatagaaagaaggaagaggaaata 60 ||||||||||||||| |||| |||||| ||| |||||||||||||||||||||| ||||| Sbjct: 255 agcaaaactaaaggggatgtagataaaaggaaggatgatagaaagaaggaagag-aaata 313 Query: 61 aataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtga 120 | ||||||||| |||||| | |||||||||||||||||||||||||||| ||||||||| Sbjct: 314 agaaagatataggattccaatatgtatggtctatgaattacatcataaaaagcaatgtga 373 Query: 121 aaaagcatcaatataataaaactaatagagaatgaaaaattgtaacttga----aagaag 176 |||||||||||||||||||| ||| ||||||| |||| |||| |||| || ||| Sbjct: 374 taaagcatcaatataataaaaataacagagaattcgaaatcgtaatttgattgaaacaag 433 Query: 177 aactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaa 236 || ||||||||| ||| ||||| ||||||| |||| |||||||||||||||||| || | Sbjct: 434 aaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactgagaaa-ttga 492 Query: 237 ctcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggaga 296 ||||||||||||||||||||||||||| ||||| |||||| ||||||||||| ||||||| Sbjct: 493 ctcggaaagaaattttttggaagctccattgcgagattcaaacctaaccattaaaggaga 552 Query: 297 agcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacac 356 |||||||||||||||||||||||||| | |||||||||| ||||||||||||| || || Sbjct: 553 agcagtgggaacgacagaacctatgactggataggattttcttgaaaagaatcccaatac 612 Query: 357 ttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaa 416 |||||||||||||||||||||||||||| |||||||||||| |||| |||| || Sbjct: 613 ttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgataaggttatgaa 672 Query: 417 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaat 476 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 673 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttattgaattagaat 732 Query: 477 actttaccgcgattcaataagagtaaaa 504 |||||||||||||||||||||||||||| Sbjct: 733 actttaccgcgattcaataagagtaaaa 760 Score = 85.7 bits (43), Expect = 2e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 542 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 601 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 798 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 857 Query: 602 tgactatatat 612 ||||||||||| Sbjct: 858 tgactatatat 868
>gb|DQ289152.1| Oryza glumipatula E ribosomal protein L16 (ribosomal protein L16) gene, partial cds; chloroplast Length = 1109 Score = 567 bits (286), Expect = e-158 Identities = 454/508 (89%), Gaps = 7/508 (1%) Strand = Plus / Plus Query: 2 agcaaaactaaaggg-atgtggataaagggagggatgatagaaagaaggaagaggaaata 60 ||||||||||||||| |||| |||||| ||| |||||||||||||||||||||| ||||| Sbjct: 254 agcaaaactaaaggggatgtagataaaaggaaggatgatagaaagaaggaagag-aaata 312 Query: 61 aataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtga 120 | ||||||||| |||||| | |||||||||||||||||||||||||||| ||||||||| Sbjct: 313 agaaagatataggattccaatatgtatggtctatgaattacatcataaaaagcaatgtga 372 Query: 121 aaaagcatcaatataataaaactaatagagaatgaaaaattgtaacttga----aagaag 176 |||||||||||||||||||| ||| ||||||| |||| |||| |||| || ||| Sbjct: 373 taaagcatcaatataataaaaataacagagaattcgaaatcgtaatttgattgaaacaag 432 Query: 177 aactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaa 236 || ||||||||| ||| ||||| ||||||| |||| |||||||||||||||||| || | Sbjct: 433 aaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactgagaaa-ttga 491 Query: 237 ctcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggaga 296 ||||||||||||||||||||||||||| ||||| |||||| ||||||||||| ||||||| Sbjct: 492 ctcggaaagaaattttttggaagctccattgcgagattcaaacctaaccattaaaggaga 551 Query: 297 agcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacac 356 |||||||||||||||||||||||||| | |||||||||| ||||||||||||| || || Sbjct: 552 agcagtgggaacgacagaacctatgactggataggattttcttgaaaagaatcccaatac 611 Query: 357 ttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaa 416 |||||||||||||||||||||||||||| |||||||||||| |||| |||| || Sbjct: 612 ttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgataaggttatgaa 671 Query: 417 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaat 476 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 672 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttattgaattagaat 731 Query: 477 actttaccgcgattcaataagagtaaaa 504 |||||||||||||||||||||||||||| Sbjct: 732 actttaccgcgattcaataagagtaaaa 759 Score = 85.7 bits (43), Expect = 2e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 542 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 601 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 797 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 856 Query: 602 tgactatatat 612 ||||||||||| Sbjct: 857 tgactatatat 867
>gb|DQ289151.1| Oryza meridionalis D ribosomal protein L16 (rpl16) gene, partial cds; chloroplast Length = 1112 Score = 567 bits (286), Expect = e-158 Identities = 454/508 (89%), Gaps = 7/508 (1%) Strand = Plus / Plus Query: 2 agcaaaactaaaggg-atgtggataaagggagggatgatagaaagaaggaagaggaaata 60 ||||||||||||||| |||| |||||| ||| |||||||||||||||||||||| ||||| Sbjct: 254 agcaaaactaaaggggatgtagataaaaggaaggatgatagaaagaaggaagag-aaata 312 Query: 61 aataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtga 120 | ||||||||| |||||| | |||||||||||||||||||||||||||| ||||||||| Sbjct: 313 agaaagatataggattccaatatgtatggtctatgaattacatcataaaaagcaatgtga 372 Query: 121 aaaagcatcaatataataaaactaatagagaatgaaaaattgtaacttga----aagaag 176 |||||||||||||||||||| ||| ||||||| |||| |||| |||| || ||| Sbjct: 373 taaagcatcaatataataaaaataacagagaattcgaaatcgtaatttgattgaaacaag 432 Query: 177 aactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaa 236 || ||||||||| ||| ||||| ||||||| |||| |||||||||||||||||| || | Sbjct: 433 aaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactgagaaa-ttga 491 Query: 237 ctcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggaga 296 ||||||||||||||||||||||||||| ||||| |||||| ||||||||||| ||||||| Sbjct: 492 ctcggaaagaaattttttggaagctccattgcgagattcaaacctaaccattaaaggaga 551 Query: 297 agcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacac 356 |||||||||||||||||||||||||| | |||||||||| ||||||||||||| || || Sbjct: 552 agcagtgggaacgacagaacctatgactggataggattttcttgaaaagaatcccaatac 611 Query: 357 ttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaa 416 |||||||||||||||||||||||||||| |||||||||||| |||| |||| || Sbjct: 612 ttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgataaggttatgaa 671 Query: 417 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaat 476 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 672 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttattgaattagaat 731 Query: 477 actttaccgcgattcaataagagtaaaa 504 |||||||||||||||||||||||||||| Sbjct: 732 actttaccgcgattcaataagagtaaaa 759 Score = 85.7 bits (43), Expect = 2e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 542 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 601 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 800 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 859 Query: 602 tgactatatat 612 ||||||||||| Sbjct: 860 tgactatatat 870
>gb|DQ289150.1| Oryza barthii C ribosomal protein L16 (rpl16) gene, partial cds; chloroplast Length = 1106 Score = 567 bits (286), Expect = e-158 Identities = 454/508 (89%), Gaps = 7/508 (1%) Strand = Plus / Plus Query: 2 agcaaaactaaaggg-atgtggataaagggagggatgatagaaagaaggaagaggaaata 60 ||||||||||||||| |||| |||||| ||| |||||||||||||||||||||| ||||| Sbjct: 253 agcaaaactaaaggggatgtagataaaaggaaggatgatagaaagaaggaagag-aaata 311 Query: 61 aataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtga 120 | ||||||||| |||||| | |||||||||||||||||||||||||||| ||||||||| Sbjct: 312 agaaagatataggattccaatatgtatggtctatgaattacatcataaaaagcaatgtga 371 Query: 121 aaaagcatcaatataataaaactaatagagaatgaaaaattgtaacttga----aagaag 176 |||||||||||||||||||| ||| ||||||| |||| |||| |||| || ||| Sbjct: 372 taaagcatcaatataataaaaataacagagaattcgaaatcgtaatttgattgaaacaag 431 Query: 177 aactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaa 236 || ||||||||| ||| ||||| ||||||| |||| |||||||||||||||||| || | Sbjct: 432 aaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactgagaaa-ttga 490 Query: 237 ctcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggaga 296 ||||||||||||||||||||||||||| ||||| |||||| ||||||||||| ||||||| Sbjct: 491 ctcggaaagaaattttttggaagctccattgcgagattcaaacctaaccattaaaggaga 550 Query: 297 agcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacac 356 |||||||||||||||||||||||||| | |||||||||| ||||||||||||| || || Sbjct: 551 agcagtgggaacgacagaacctatgactggataggattttcttgaaaagaatcccaatac 610 Query: 357 ttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaa 416 |||||||||||||||||||||||||||| |||||||||||| |||| |||| || Sbjct: 611 ttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgataaggttatgaa 670 Query: 417 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaat 476 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 671 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttattgaattagaat 730 Query: 477 actttaccgcgattcaataagagtaaaa 504 |||||||||||||||||||||||||||| Sbjct: 731 actttaccgcgattcaataagagtaaaa 758 Score = 85.7 bits (43), Expect = 2e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 542 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 601 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 794 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 853 Query: 602 tgactatatat 612 ||||||||||| Sbjct: 854 tgactatatat 864
>gb|DQ289148.1| Oryza sativa A ribosomal protein L16 (rpl16) gene, partial cds; chloroplast Length = 1113 Score = 567 bits (286), Expect = e-158 Identities = 454/508 (89%), Gaps = 7/508 (1%) Strand = Plus / Plus Query: 2 agcaaaactaaaggg-atgtggataaagggagggatgatagaaagaaggaagaggaaata 60 ||||||||||||||| |||| |||||| ||| |||||||||||||||||||||| ||||| Sbjct: 254 agcaaaactaaaggggatgtagataaaaggaaggatgatagaaagaaggaagag-aaata 312 Query: 61 aataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtga 120 | ||||||||| |||||| | |||||||||||||||||||||||||||| ||||||||| Sbjct: 313 agaaagatataggattccaatatgtatggtctatgaattacatcataaaaagcaatgtga 372 Query: 121 aaaagcatcaatataataaaactaatagagaatgaaaaattgtaacttga----aagaag 176 |||||||||||||||||||| ||| ||||||| |||| |||| |||| || ||| Sbjct: 373 taaagcatcaatataataaaaataacagagaattcgaaatcgtaatttgattgaaacaag 432 Query: 177 aactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaa 236 || ||||||||| ||| ||||| ||||||| |||| |||||||||||||||||| || | Sbjct: 433 aaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactgagaaa-ttga 491 Query: 237 ctcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggaga 296 ||||||||||||||||||||||||||| ||||| |||||| ||||||||||| ||||||| Sbjct: 492 ctcggaaagaaattttttggaagctccattgcgagattcaaacctaaccattaaaggaga 551 Query: 297 agcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacac 356 |||||||||||||||||||||||||| | |||||||||| ||||||||||||| || || Sbjct: 552 agcagtgggaacgacagaacctatgactggataggattttcttgaaaagaatcccaatac 611 Query: 357 ttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaa 416 |||||||||||||||||||||||||||| |||||||||||| |||| |||| || Sbjct: 612 ttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgataaggttatgaa 671 Query: 417 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaat 476 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 672 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttattgaattagaat 731 Query: 477 actttaccgcgattcaataagagtaaaa 504 |||||||||||||||||||||||||||| Sbjct: 732 actttaccgcgattcaataagagtaaaa 759 Score = 85.7 bits (43), Expect = 2e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 542 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 601 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 801 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 860 Query: 602 tgactatatat 612 ||||||||||| Sbjct: 861 tgactatatat 871
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 567 bits (286), Expect = e-158 Identities = 454/508 (89%), Gaps = 7/508 (1%) Strand = Plus / Plus Query: 2 agcaaaactaaaggg-atgtggataaagggagggatgatagaaagaaggaagaggaaata 60 ||||||||||||||| |||| |||||| ||| |||||||||||||||||||||| ||||| Sbjct: 14454738 agcaaaactaaaggggatgtagataaaaggaaggatgatagaaagaaggaagag-aaata 14454796 Query: 61 aataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtga 120 | ||||||||| |||||| | |||||||||||||||||||||||||||| ||||||||| Sbjct: 14454797 agaaagatataggattccaatatgtatggtctatgaattacatcataaaaagcaatgtga 14454856 Query: 121 aaaagcatcaatataataaaactaatagagaatgaaaaattgtaacttga----aagaag 176 |||||||||||||||||||| ||| ||||||| |||| |||| |||| || ||| Sbjct: 14454857 taaagcatcaatataataaaaataacagagaattcgaaatcgtaatttgattgaaacaag 14454916 Query: 177 aactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaa 236 || ||||||||| ||| ||||| ||||||| |||| |||||||||||||||||| || | Sbjct: 14454917 aaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactgagaaa-ttga 14454975 Query: 237 ctcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggaga 296 ||||||||||||||||||||||||||| ||||| |||||| ||||||||||| ||||||| Sbjct: 14454976 ctcggaaagaaattttttggaagctccattgcgagattcaaacctaaccattaaaggaga 14455035 Query: 297 agcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacac 356 |||||||||||||||||||||||||| | |||||||||| ||||||||||||| || || Sbjct: 14455036 agcagtgggaacgacagaacctatgactggataggattttcttgaaaagaatcccaatac 14455095 Query: 357 ttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaa 416 |||||||||||||||||||||||||||| |||||||||||| |||| |||| || Sbjct: 14455096 ttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgataaggttatgaa 14455155 Query: 417 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaat 476 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 14455156 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttattgaattagaat 14455215 Query: 477 actttaccgcgattcaataagagtaaaa 504 |||||||||||||||||||||||||||| Sbjct: 14455216 actttaccgcgattcaataagagtaaaa 14455243 Score = 355 bits (179), Expect = 1e-94 Identities = 339/388 (87%), Gaps = 7/388 (1%) Strand = Plus / Plus Query: 2 agcaaaactaaaggg-atgtggataaagggagggatgatagaaagaaggaagaggaaata 60 ||||||||||||||| |||| |||||| ||| |||||||||||||||||||||| ||||| Sbjct: 11894943 agcaaaactaaaggggatgtagataaaaggaaggatgatagaaagaaggaagag-aaata 11895001 Query: 61 aataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtga 120 | ||||||||| |||||| | |||||||||||||||||||||||||||| ||||||||| Sbjct: 11895002 agaaagatataggattccaatatgtatggtctatgaattacatcataaaaagcaatgtga 11895061 Query: 121 aaaagcatcaatataataaaactaatagagaatgaaaaattgtaacttga----aagaag 176 |||||||||||||||||||| ||| | ||||| |||| |||| |||| || ||| Sbjct: 11895062 taaagcatcaatataataaaaataacaaagaattcgaaatcgtaatttgattgaaacaag 11895121 Query: 177 aactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaa 236 || ||||||||| ||| ||||| |||||| |||| |||||||||||||||||| || | Sbjct: 11895122 aaatacaaatttcaaggaataacaaagagtgtcccgagttaataaaactgagaaa-ttga 11895180 Query: 237 ctcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggaga 296 || |||||||||||||||||||||||| ||| | |||| | ||||||||||| ||||||| Sbjct: 11895181 cttggaaagaaattttttggaagctccattgtgagattaaaacctaaccattaaaggaga 11895240 Query: 297 agcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacac 356 ||| |||||||||||||||||||||| | |||||||||| ||||||||||||| || || Sbjct: 11895241 agccgtgggaacgacagaacctatgactggataggattttcttgaaaagaatcccaatac 11895300 Query: 357 ttcattgggtgggatggcggaacaaacc 384 |||||||||||||||||||||||||||| Sbjct: 11895301 ttcattgggtgggatggcggaacaaacc 11895328 Score = 165 bits (83), Expect = 2e-37 Identities = 86/87 (98%) Strand = Plus / Plus Query: 418 taacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaata 477 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 11895349 taacaaataagacaggaaagagtaaatattcgcccgcgaaatttttattgaattagaata 11895408 Query: 478 ctttaccgcgattcaataagagtaaaa 504 ||||||||||||||||||||||||||| Sbjct: 11895409 ctttaccgcgattcaataagagtaaaa 11895435 Score = 85.7 bits (43), Expect = 2e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 542 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 601 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 14455279 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 14455338 Query: 602 tgactatatat 612 ||||||||||| Sbjct: 14455339 tgactatatat 14455349 Score = 85.7 bits (43), Expect = 2e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 542 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 601 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 11895468 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 11895527 Query: 602 tgactatatat 612 ||||||||||| Sbjct: 11895528 tgactatatat 11895538
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 567 bits (286), Expect = e-158 Identities = 454/508 (89%), Gaps = 7/508 (1%) Strand = Plus / Plus Query: 2 agcaaaactaaaggg-atgtggataaagggagggatgatagaaagaaggaagaggaaata 60 ||||||||||||||| |||| |||||| ||| |||||||||||||||||||||| ||||| Sbjct: 9258108 agcaaaactaaaggggatgtagataaaaggaaggatgatagaaagaaggaagag-aaata 9258166 Query: 61 aataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtga 120 | ||||||||| |||||| | |||||||||||||||||||||||||||| ||||||||| Sbjct: 9258167 agaaagatataggattccaatatgtatggtctatgaattacatcataaaaagcaatgtga 9258226 Query: 121 aaaagcatcaatataataaaactaatagagaatgaaaaattgtaacttga----aagaag 176 |||||||||||||||||||| ||| ||||||| |||| |||| |||| || ||| Sbjct: 9258227 taaagcatcaatataataaaaataacagagaattcgaaatcgtaatttgattgaaacaag 9258286 Query: 177 aactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaa 236 || ||||||||| ||| ||||| ||||||| |||| |||||||||||||||||| || | Sbjct: 9258287 aaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactgagaaa-ttga 9258345 Query: 237 ctcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggaga 296 ||||||||||||||||||||||||||| ||||| |||||| ||||||||||| ||||||| Sbjct: 9258346 ctcggaaagaaattttttggaagctccattgcgagattcaaacctaaccattaaaggaga 9258405 Query: 297 agcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacac 356 |||||||||||||||||||||||||| | |||||||||| ||||||||||||| || || Sbjct: 9258406 agcagtgggaacgacagaacctatgactggataggattttcttgaaaagaatcccaatac 9258465 Query: 357 ttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaa 416 |||||||||||||||||||||||||||| |||||||||||| |||| |||| || Sbjct: 9258466 ttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgataaggttatgaa 9258525 Query: 417 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaat 476 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 9258526 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttattgaattagaat 9258585 Query: 477 actttaccgcgattcaataagagtaaaa 504 |||||||||||||||||||||||||||| Sbjct: 9258586 actttaccgcgattcaataagagtaaaa 9258613 Score = 85.7 bits (43), Expect = 2e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 542 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 601 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 9258647 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 9258706 Query: 602 tgactatatat 612 ||||||||||| Sbjct: 9258707 tgactatatat 9258717
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 567 bits (286), Expect = e-158 Identities = 454/508 (89%), Gaps = 7/508 (1%) Strand = Plus / Minus Query: 2 agcaaaactaaaggg-atgtggataaagggagggatgatagaaagaaggaagaggaaata 60 ||||||||||||||| |||| |||||| ||| |||||||||||||||||||||| ||||| Sbjct: 12757508 agcaaaactaaaggggatgtagataaaaggaaggatgatagaaagaaggaagag-aaata 12757450 Query: 61 aataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtga 120 | ||||||||| |||||| | |||||||||||||||||||||||||||| ||||||||| Sbjct: 12757449 agaaagatataggattccaatatgtatggtctatgaattacatcataaaaagcaatgtga 12757390 Query: 121 aaaagcatcaatataataaaactaatagagaatgaaaaattgtaacttga----aagaag 176 |||||||||||||||||||| ||| ||||||| |||| |||| |||| || ||| Sbjct: 12757389 taaagcatcaatataataaaaataacagagaattcgaaatcgtaatttgattgaaacaag 12757330 Query: 177 aactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaa 236 || ||||||||| ||| ||||| ||||||| |||| |||||||||||||||||| || | Sbjct: 12757329 aaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactgagaaa-ttga 12757271 Query: 237 ctcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggaga 296 ||||||||||||||||||||||||||| ||||| |||||| ||||||||||| ||||||| Sbjct: 12757270 ctcggaaagaaattttttggaagctccattgcgagattcaaacctaaccattaaaggaga 12757211 Query: 297 agcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacac 356 |||||||||||||||||||||||||| | |||||||||| ||||||||||||| || || Sbjct: 12757210 agcagtgggaacgacagaacctatgactggataggattttcttgaaaagaatcccaatac 12757151 Query: 357 ttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaa 416 |||||||||||||||||||||||||||| |||||||||||| |||| |||| || Sbjct: 12757150 ttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgataaggttatgaa 12757091 Query: 417 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaat 476 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 12757090 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttattgaattagaat 12757031 Query: 477 actttaccgcgattcaataagagtaaaa 504 |||||||||||||||||||||||||||| Sbjct: 12757030 actttaccgcgattcaataagagtaaaa 12757003 Score = 490 bits (247), Expect = e-135 Identities = 447/509 (87%), Gaps = 9/509 (1%) Strand = Plus / Plus Query: 2 agcaaaactaaaggg-atgtggataaagggagggatgatagaaagaaggaagaggaaata 60 ||||||||||||||| |||| |||||| ||| |||||||||||||||||||||| ||| | Sbjct: 19544076 agcaaaactaaaggggatgtagataaaaggaaggatgatagaaagaaggaagagaaaaaa 19544135 Query: 61 aataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtga 120 | ||||||||| |||||| | |||||||||||||||||||||||||||| ||||||||| Sbjct: 19544136 ga-aagatataggattccaatatgtatggtctatgaattacatcataaaaagcaatgtga 19544194 Query: 121 aaaagcatcaatataataaaactaatagagaatgaaaaattgtaacttga----aagaag 176 |||||||||||||||||||| ||| | ||||| |||| |||| |||| || ||| Sbjct: 19544195 taaagcatcaatataataaaaataacaaagaattcgaaatcgtaatttgattgaaacaag 19544254 Query: 177 aactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaa 236 || ||||||||| ||| ||||| ||||||| || | ||||||||| |||||||| || | Sbjct: 19544255 aaatacaaatttcaaggaataacaaagagcgtcctgagttaataaa-ctgagaaa-ttga 19544312 Query: 237 ctcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggaga 296 ||||||||||||||||||||||||||| ||||| |||||| ||||||||||| ||||||| Sbjct: 19544313 ctcggaaagaaattttttggaagctccattgcgagattcaaacctaaccattaaaggaga 19544372 Query: 297 agcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacac 356 ||||||||||| |||||||||||||| | |||||||||| ||||||| ||||| || || Sbjct: 19544373 agcagtgggaatgacagaacctatgactggataggattttcttgaaaaaaatcccaatac 19544432 Query: 357 ttcattgggtgggatggcggaacaaacc-nnnnnnnttgtcttatttggtaagtttataa 415 |||||||||||||||||||||||||||| |||||||||||| |||| |||| | Sbjct: 19544433 ttcattgggtgggatggcggaacaaaccaaaaaaaattgtcttatttgataaggttatga 19544492 Query: 416 attaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaa 475 |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| Sbjct: 19544493 attaacaaataagacatgaaagagtaaatattcgcccgcgaaatttttattgaattagaa 19544552 Query: 476 tactttaccgcgattcaataagagtaaaa 504 ||||||||||||||||||||||||||||| Sbjct: 19544553 tactttaccgcgattcaataagagtaaaa 19544581 Score = 85.7 bits (43), Expect = 2e-13 Identities = 64/71 (90%) Strand = Plus / Minus Query: 542 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 601 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 12756966 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 12756907 Query: 602 tgactatatat 612 ||||||||||| Sbjct: 12756906 tgactatatat 12756896 Score = 79.8 bits (40), Expect = 1e-11 Identities = 65/72 (90%), Gaps = 1/72 (1%) Strand = Plus / Plus Query: 542 taaatatagaatttagataaatatccacacacatctggatatattctagatcttctttt- 600 |||||||||||| |||||||||| || |||||||| ||||||||||||||| |||||| Sbjct: 19544614 taaatatagaatatagataaataaacatacacatctagatatattctagatcctcttttc 19544673 Query: 601 ttgactatatat 612 |||||||||||| Sbjct: 19544674 ttgactatatat 19544685
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 567 bits (286), Expect = e-158 Identities = 454/508 (89%), Gaps = 7/508 (1%) Strand = Plus / Plus Query: 2 agcaaaactaaaggg-atgtggataaagggagggatgatagaaagaaggaagaggaaata 60 ||||||||||||||| |||| |||||| ||| |||||||||||||||||||||| ||||| Sbjct: 69321 agcaaaactaaaggggatgtagataaaaggaaggatgatagaaagaaggaagag-aaata 69379 Query: 61 aataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtga 120 | ||||||||| |||||| | |||||||||||||||||||||||||||| ||||||||| Sbjct: 69380 agaaagatataggattccaatatgtatggtctatgaattacatcataaaaagcaatgtga 69439 Query: 121 aaaagcatcaatataataaaactaatagagaatgaaaaattgtaacttga----aagaag 176 |||||||||||||||||||| ||| ||||||| |||| |||| |||| || ||| Sbjct: 69440 taaagcatcaatataataaaaataacagagaattcgaaatcgtaatttgattgaaacaag 69499 Query: 177 aactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaa 236 || ||||||||| ||| ||||| ||||||| |||| |||||||||||||||||| || | Sbjct: 69500 aaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactgagaaa-ttga 69558 Query: 237 ctcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggaga 296 ||||||||||||||||||||||||||| ||||| |||||| ||||||||||| ||||||| Sbjct: 69559 ctcggaaagaaattttttggaagctccattgcgagattcaaacctaaccattaaaggaga 69618 Query: 297 agcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacac 356 |||||||||||||||||||||||||| | |||||||||| ||||||||||||| || || Sbjct: 69619 agcagtgggaacgacagaacctatgactggataggattttcttgaaaagaatcccaatac 69678 Query: 357 ttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaa 416 |||||||||||||||||||||||||||| |||||||||||| |||| |||| || Sbjct: 69679 ttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgataaggttatgaa 69738 Query: 417 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaat 476 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 69739 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttattgaattagaat 69798 Query: 477 actttaccgcgattcaataagagtaaaa 504 |||||||||||||||||||||||||||| Sbjct: 69799 actttaccgcgattcaataagagtaaaa 69826 Score = 85.7 bits (43), Expect = 2e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 542 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 601 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 69860 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 69919 Query: 602 tgactatatat 612 ||||||||||| Sbjct: 69920 tgactatatat 69930
>dbj|AP005707.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0465E03 Length = 151206 Score = 567 bits (286), Expect = e-158 Identities = 454/508 (89%), Gaps = 7/508 (1%) Strand = Plus / Plus Query: 2 agcaaaactaaaggg-atgtggataaagggagggatgatagaaagaaggaagaggaaata 60 ||||||||||||||| |||| |||||| ||| |||||||||||||||||||||| ||||| Sbjct: 146541 agcaaaactaaaggggatgtagataaaaggaaggatgatagaaagaaggaagag-aaata 146599 Query: 61 aataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtga 120 | ||||||||| |||||| | |||||||||||||||||||||||||||| ||||||||| Sbjct: 146600 agaaagatataggattccaatatgtatggtctatgaattacatcataaaaagcaatgtga 146659 Query: 121 aaaagcatcaatataataaaactaatagagaatgaaaaattgtaacttga----aagaag 176 |||||||||||||||||||| ||| ||||||| |||| |||| |||| || ||| Sbjct: 146660 taaagcatcaatataataaaaataacagagaattcgaaatcgtaatttgattgaaacaag 146719 Query: 177 aactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaa 236 || ||||||||| ||| ||||| ||||||| |||| |||||||||||||||||| || | Sbjct: 146720 aaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactgagaaa-ttga 146778 Query: 237 ctcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggaga 296 ||||||||||||||||||||||||||| ||||| |||||| ||||||||||| ||||||| Sbjct: 146779 ctcggaaagaaattttttggaagctccattgcgagattcaaacctaaccattaaaggaga 146838 Query: 297 agcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacac 356 |||||||||||||||||||||||||| | |||||||||| ||||||||||||| || || Sbjct: 146839 agcagtgggaacgacagaacctatgactggataggattttcttgaaaagaatcccaatac 146898 Query: 357 ttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaa 416 |||||||||||||||||||||||||||| |||||||||||| |||| |||| || Sbjct: 146899 ttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgataaggttatgaa 146958 Query: 417 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaat 476 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 146959 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttattgaattagaat 147018 Query: 477 actttaccgcgattcaataagagtaaaa 504 |||||||||||||||||||||||||||| Sbjct: 147019 actttaccgcgattcaataagagtaaaa 147046 Score = 85.7 bits (43), Expect = 2e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 542 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 601 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 147082 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 147141 Query: 602 tgactatatat 612 ||||||||||| Sbjct: 147142 tgactatatat 147152
>dbj|AP005683.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1585_D02 Length = 103172 Score = 567 bits (286), Expect = e-158 Identities = 454/508 (89%), Gaps = 7/508 (1%) Strand = Plus / Plus Query: 2 agcaaaactaaaggg-atgtggataaagggagggatgatagaaagaaggaagaggaaata 60 ||||||||||||||| |||| |||||| ||| |||||||||||||||||||||| ||||| Sbjct: 54303 agcaaaactaaaggggatgtagataaaaggaaggatgatagaaagaaggaagag-aaata 54361 Query: 61 aataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtga 120 | ||||||||| |||||| | |||||||||||||||||||||||||||| ||||||||| Sbjct: 54362 agaaagatataggattccaatatgtatggtctatgaattacatcataaaaagcaatgtga 54421 Query: 121 aaaagcatcaatataataaaactaatagagaatgaaaaattgtaacttga----aagaag 176 |||||||||||||||||||| ||| ||||||| |||| |||| |||| || ||| Sbjct: 54422 taaagcatcaatataataaaaataacagagaattcgaaatcgtaatttgattgaaacaag 54481 Query: 177 aactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaa 236 || ||||||||| ||| ||||| ||||||| |||| |||||||||||||||||| || | Sbjct: 54482 aaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactgagaaa-ttga 54540 Query: 237 ctcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggaga 296 ||||||||||||||||||||||||||| ||||| |||||| ||||||||||| ||||||| Sbjct: 54541 ctcggaaagaaattttttggaagctccattgcgagattcaaacctaaccattaaaggaga 54600 Query: 297 agcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacac 356 |||||||||||||||||||||||||| | |||||||||| ||||||||||||| || || Sbjct: 54601 agcagtgggaacgacagaacctatgactggataggattttcttgaaaagaatcccaatac 54660 Query: 357 ttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaa 416 |||||||||||||||||||||||||||| |||||||||||| |||| |||| || Sbjct: 54661 ttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgataaggttatgaa 54720 Query: 417 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaat 476 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 54721 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttattgaattagaat 54780 Query: 477 actttaccgcgattcaataagagtaaaa 504 |||||||||||||||||||||||||||| Sbjct: 54781 actttaccgcgattcaataagagtaaaa 54808 Score = 85.7 bits (43), Expect = 2e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 542 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 601 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 54844 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 54903 Query: 602 tgactatatat 612 ||||||||||| Sbjct: 54904 tgactatatat 54914
>dbj|AK072149.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013128P04, full insert sequence Length = 2475 Score = 567 bits (286), Expect = e-158 Identities = 454/508 (89%), Gaps = 7/508 (1%) Strand = Plus / Plus Query: 2 agcaaaactaaaggg-atgtggataaagggagggatgatagaaagaaggaagaggaaata 60 ||||||||||||||| |||| |||||| ||| |||||||||||||||||||||| ||||| Sbjct: 1955 agcaaaactaaaggggatgtagataaaaggaaggatgatagaaagaaggaagag-aaata 2013 Query: 61 aataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtga 120 | ||||||||| |||||| | |||||||||||||||||||||||||||| ||||||||| Sbjct: 2014 agaaagatataggattccaatatgtatggtctatgaattacatcataaaaagcaatgtga 2073 Query: 121 aaaagcatcaatataataaaactaatagagaatgaaaaattgtaacttga----aagaag 176 |||||||||||||||||||| ||| ||||||| |||| |||| |||| || ||| Sbjct: 2074 taaagcatcaatataataaaaataacagagaattcgaaatcgtaatttgattgaaacaag 2133 Query: 177 aactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaa 236 || ||||||||| ||| ||||| ||||||| |||| |||||||||||||||||| || | Sbjct: 2134 aaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactgagaaa-ttga 2192 Query: 237 ctcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggaga 296 ||||||||||||||||||||||||||| ||||| |||||| ||||||||||| ||||||| Sbjct: 2193 ctcggaaagaaattttttggaagctccattgcgagattcaaacctaaccattaaaggaga 2252 Query: 297 agcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacac 356 |||||||||||||||||||||||||| | |||||||||| ||||||||||||| || || Sbjct: 2253 agcagtgggaacgacagaacctatgactggataggattttcttgaaaagaatcccaatac 2312 Query: 357 ttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaa 416 |||||||||||||||||||||||||||| |||||||||||| |||| |||| || Sbjct: 2313 ttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgataaggttatgaa 2372 Query: 417 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaat 476 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 2373 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttattgaattagaat 2432 Query: 477 actttaccgcgattcaataagagtaaaa 504 |||||||||||||||||||||||||||| Sbjct: 2433 actttaccgcgattcaataagagtaaaa 2460
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 567 bits (286), Expect = e-158 Identities = 454/508 (89%), Gaps = 7/508 (1%) Strand = Plus / Minus Query: 2 agcaaaactaaaggg-atgtggataaagggagggatgatagaaagaaggaagaggaaata 60 ||||||||||||||| |||| |||||| ||| |||||||||||||||||||||| ||||| Sbjct: 78901 agcaaaactaaaggggatgtagataaaaggaaggatgatagaaagaaggaagag-aaata 78843 Query: 61 aataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtga 120 | ||||||||| |||||| | |||||||||||||||||||||||||||| ||||||||| Sbjct: 78842 agaaagatataggattccaatatgtatggtctatgaattacatcataaaaagcaatgtga 78783 Query: 121 aaaagcatcaatataataaaactaatagagaatgaaaaattgtaacttga----aagaag 176 |||||||||||||||||||| ||| ||||||| |||| |||| |||| || ||| Sbjct: 78782 taaagcatcaatataataaaaataacagagaattcgaaatcgtaatttgattgaaacaag 78723 Query: 177 aactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaa 236 || ||||||||| ||| ||||| ||||||| |||| |||||||||||||||||| || | Sbjct: 78722 aaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactgagaaa-ttga 78664 Query: 237 ctcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggaga 296 ||||||||||||||||||||||||||| ||||| |||||| ||||||||||| ||||||| Sbjct: 78663 ctcggaaagaaattttttggaagctccattgcgagattcaaacctaaccattaaaggaga 78604 Query: 297 agcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacac 356 |||||||||||||||||||||||||| | |||||||||| ||||||||||||| || || Sbjct: 78603 agcagtgggaacgacagaacctatgactggataggattttcttgaaaagaatcccaatac 78544 Query: 357 ttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaa 416 |||||||||||||||||||||||||||| |||||||||||| |||| |||| || Sbjct: 78543 ttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgataaggttatgaa 78484 Query: 417 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaat 476 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 78483 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttattgaattagaat 78424 Query: 477 actttaccgcgattcaataagagtaaaa 504 |||||||||||||||||||||||||||| Sbjct: 78423 actttaccgcgattcaataagagtaaaa 78396 Score = 85.7 bits (43), Expect = 2e-13 Identities = 64/71 (90%) Strand = Plus / Minus Query: 542 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 601 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 78358 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 78299 Query: 602 tgactatatat 612 ||||||||||| Sbjct: 78298 tgactatatat 78288
>gb|AY847081.1| Phragmites australis ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1166 Score = 561 bits (283), Expect = e-157 Identities = 456/514 (88%), Gaps = 9/514 (1%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| |||||||||||||| |||||||||| ||| ||| Sbjct: 234 agcaaaactaaagggatgtggataaaaggagggatgatagatagaaggaagaagaa-taa 292 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 293 gaaagatataggattccaatgtgtatggtctatgaattacatcataaaaggcaatgtgat 352 Query: 122 aaagcatcaatataataa-------aactaatagagaatgaaaaattgtaacttgaaaga 174 |||||||||||||||||| || ||| ||||||| |||| ||||||||||| | Sbjct: 353 aaagcatcaatataataaaataataaaataaaagagaattcgaaatcgtaacttgaaaca 412 Query: 175 agaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaatt 234 | || ||| || |||||||||||| |||| || ||||||||||||||||||||||| Sbjct: 413 aaaaaacaaaaattaaagcaataataaggagcaaccggggttaataaaactgagaaaatt 472 Query: 235 aactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaagga 294 |||||||||||||||||||||||||||| |||| ||||||| ||||||||||| ||||| Sbjct: 473 gactcggaaagaaattttttggaagctccattgcaggattcaaacctaaccattaaagga 532 Query: 295 gaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaac 354 ||||| |||||||||||| ||||||||| | |||||||||||||| ||||||||||||| Sbjct: 533 gaagctgtgggaacgacaaaacctatgactgcataggattttattcaaaagaatcctaat 592 Query: 355 acttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttata 414 |||||||||||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 593 acttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttggtaaggttata 652 Query: 415 aattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattaga 474 ||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 653 aattaacaaataagacaggaaagagtaaatattcgcccgcgaaatctttattggattaga 712 Query: 475 atactttaccgcgattcaataagagtaaaaataa 508 |||||||| | ||||||||||||||||||||||| Sbjct: 713 atacttta-cacgattcaataagagtaaaaataa 745 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 580 atatattctagatcttcttttttgactatatat 612 |||||||||||||||||||| |||||||||||| Sbjct: 797 atatattctagatcttctttcttgactatatat 829
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 559 bits (282), Expect = e-156 Identities = 453/508 (89%), Gaps = 7/508 (1%) Strand = Plus / Plus Query: 2 agcaaaactaaaggg-atgtggataaagggagggatgatagaaagaaggaagaggaaata 60 ||||||||||||||| |||| |||||| ||| |||||||||||||||||||||| ||||| Sbjct: 71793 agcaaaactaaaggggatgtagataaaaggaaggatgatagaaagaaggaagag-aaata 71851 Query: 61 aataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtga 120 | ||||||||| |||||| | |||||||||||||||||||||||||||| ||||||||| Sbjct: 71852 agaaagatataggattccaatatgtatggtctatgaattacatcataaaaagcaatgtga 71911 Query: 121 aaaagcatcaatataataaaactaatagagaatgaaaaattgtaacttga----aagaag 176 |||||||||||||||||||| ||| ||||||| || | |||| |||| || ||| Sbjct: 71912 taaagcatcaatataataaaaataacagagaattcgaagtcgtaatttgattgaaacaag 71971 Query: 177 aactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaa 236 || ||||||||| ||| ||||| ||||||| |||| |||||||||||||||||| || | Sbjct: 71972 aaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactgagaaa-ttga 72030 Query: 237 ctcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggaga 296 ||||||||||||||||||||||||||| ||||| |||||| ||||||||||| ||||||| Sbjct: 72031 ctcggaaagaaattttttggaagctccattgcgagattcaaacctaaccattaaaggaga 72090 Query: 297 agcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacac 356 |||||||||||||||||||||||||| | |||||||||| ||||||||||||| || || Sbjct: 72091 agcagtgggaacgacagaacctatgactggataggattttcttgaaaagaatcccaatac 72150 Query: 357 ttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaa 416 |||||||||||||||||||||||||||| |||||||||||| |||| |||| || Sbjct: 72151 ttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgataaggttatgaa 72210 Query: 417 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaat 476 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 72211 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttattgaattagaat 72270 Query: 477 actttaccgcgattcaataagagtaaaa 504 |||||||||||||||||||||||||||| Sbjct: 72271 actttaccgcgattcaataagagtaaaa 72298 Score = 85.7 bits (43), Expect = 2e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 542 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 601 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 72338 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 72397 Query: 602 tgactatatat 612 ||||||||||| Sbjct: 72398 tgactatatat 72408
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 559 bits (282), Expect = e-156 Identities = 453/508 (89%), Gaps = 7/508 (1%) Strand = Plus / Minus Query: 2 agcaaaactaaaggg-atgtggataaagggagggatgatagaaagaaggaagaggaaata 60 ||||||||||||||| |||| |||||| ||| |||||||||||||||||||||| ||||| Sbjct: 77143 agcaaaactaaaggggatgtagataaaaggaaggatgatagaaagaaggaagag-aaata 77085 Query: 61 aataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtga 120 | ||||||||| |||||| | |||||||||||||||||||||||||||| ||||||||| Sbjct: 77084 agaaagatataggattccaatatgtatggtctatgaattacatcataaaaagcaatgtga 77025 Query: 121 aaaagcatcaatataataaaactaatagagaatgaaaaattgtaacttga----aagaag 176 |||||||||||||||||||| ||| ||||||| || | |||| |||| || ||| Sbjct: 77024 taaagcatcaatataataaaaataacagagaattcgaagtcgtaatttgattgaaacaag 76965 Query: 177 aactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaa 236 || ||||||||| ||| ||||| ||||||| |||| |||||||||||||||||| || | Sbjct: 76964 aaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactgagaaa-ttga 76906 Query: 237 ctcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggaga 296 ||||||||||||||||||||||||||| ||||| |||||| ||||||||||| ||||||| Sbjct: 76905 ctcggaaagaaattttttggaagctccattgcgagattcaaacctaaccattaaaggaga 76846 Query: 297 agcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacac 356 |||||||||||||||||||||||||| | |||||||||| ||||||||||||| || || Sbjct: 76845 agcagtgggaacgacagaacctatgactggataggattttcttgaaaagaatcccaatac 76786 Query: 357 ttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaa 416 |||||||||||||||||||||||||||| |||||||||||| |||| |||| || Sbjct: 76785 ttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgataaggttatgaa 76726 Query: 417 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaat 476 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 76725 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttattgaattagaat 76666 Query: 477 actttaccgcgattcaataagagtaaaa 504 |||||||||||||||||||||||||||| Sbjct: 76665 actttaccgcgattcaataagagtaaaa 76638 Score = 85.7 bits (43), Expect = 2e-13 Identities = 64/71 (90%) Strand = Plus / Minus Query: 542 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 601 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 76603 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 76544 Query: 602 tgactatatat 612 ||||||||||| Sbjct: 76543 tgactatatat 76533
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 559 bits (282), Expect = e-156 Identities = 453/508 (89%), Gaps = 7/508 (1%) Strand = Plus / Minus Query: 2 agcaaaactaaaggg-atgtggataaagggagggatgatagaaagaaggaagaggaaata 60 ||||||||||||||| |||| |||||| ||| |||||||||||||||||||||| ||||| Sbjct: 11207 agcaaaactaaaggggatgtagataaaaggaaggatgatagaaagaaggaagag-aaata 11149 Query: 61 aataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtga 120 | ||||||||| |||||| | |||||||||||||||||||||||||||| ||||||||| Sbjct: 11148 agaaagatataggattccaatatgtatggtctatgaattacatcataaaaagcaatgtga 11089 Query: 121 aaaagcatcaatataataaaactaatagagaatgaaaaattgtaacttga----aagaag 176 |||||||||||||||||||| ||| ||||||| || | |||| |||| || ||| Sbjct: 11088 taaagcatcaatataataaaaataacagagaattcgaagtcgtaatttgattgaaacaag 11029 Query: 177 aactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaa 236 || ||||||||| ||| ||||| ||||||| |||| |||||||||||||||||| || | Sbjct: 11028 aaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactgagaaa-ttga 10970 Query: 237 ctcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggaga 296 ||||||||||||||||||||||||||| ||||| |||||| ||||||||||| ||||||| Sbjct: 10969 ctcggaaagaaattttttggaagctccattgcgagattcaaacctaaccattaaaggaga 10910 Query: 297 agcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacac 356 |||||||||||||||||||||||||| | |||||||||| ||||||||||||| || || Sbjct: 10909 agcagtgggaacgacagaacctatgactggataggattttcttgaaaagaatcccaatac 10850 Query: 357 ttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaa 416 |||||||||||||||||||||||||||| |||||||||||| |||| |||| || Sbjct: 10849 ttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgataaggttatgaa 10790 Query: 417 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaat 476 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 10789 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttattgaattagaat 10730 Query: 477 actttaccgcgattcaataagagtaaaa 504 |||||||||||||||||||||||||||| Sbjct: 10729 actttaccgcgattcaataagagtaaaa 10702 Score = 85.7 bits (43), Expect = 2e-13 Identities = 64/71 (90%) Strand = Plus / Minus Query: 542 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 601 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 10667 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 10608 Query: 602 tgactatatat 612 ||||||||||| Sbjct: 10607 tgactatatat 10597
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 559 bits (282), Expect = e-156 Identities = 453/508 (89%), Gaps = 7/508 (1%) Strand = Plus / Plus Query: 2 agcaaaactaaaggg-atgtggataaagggagggatgatagaaagaaggaagaggaaata 60 ||||||||||||||| |||| |||||| ||| |||||||||||||||||||||| ||||| Sbjct: 9190720 agcaaaactaaaggggatgtagataaaaggaaggatgatagaaagaaggaagag-aaata 9190778 Query: 61 aataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtga 120 | ||||||||| |||||| | |||||||||||||||||||||||||||| ||||||||| Sbjct: 9190779 agaaagatataggattccaatatgtatggtctatgaattacatcataaaaagcaatgtga 9190838 Query: 121 aaaagcatcaatataataaaactaatagagaatgaaaaattgtaacttga----aagaag 176 |||||||||||||||||||| ||| ||||||| || | |||| |||| || ||| Sbjct: 9190839 taaagcatcaatataataaaaataacagagaattcgaagtcgtaatttgattgaaacaag 9190898 Query: 177 aactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaa 236 || ||||||||| ||| ||||| ||||||| |||| |||||||||||||||||| || | Sbjct: 9190899 aaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactgagaaa-ttga 9190957 Query: 237 ctcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggaga 296 ||||||||||||||||||||||||||| ||||| |||||| ||||||||||| ||||||| Sbjct: 9190958 ctcggaaagaaattttttggaagctccattgcgagattcaaacctaaccattaaaggaga 9191017 Query: 297 agcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacac 356 |||||||||||||||||||||||||| | |||||||||| ||||||||||||| || || Sbjct: 9191018 agcagtgggaacgacagaacctatgactggataggattttcttgaaaagaatcccaatac 9191077 Query: 357 ttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaa 416 |||||||||||||||||||||||||||| |||||||||||| |||| |||| || Sbjct: 9191078 ttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgataaggttatgaa 9191137 Query: 417 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaat 476 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 9191138 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttattgaattagaat 9191197 Query: 477 actttaccgcgattcaataagagtaaaa 504 |||||||||||||||||||||||||||| Sbjct: 9191198 actttaccgcgattcaataagagtaaaa 9191225 Score = 559 bits (282), Expect = e-156 Identities = 453/508 (89%), Gaps = 7/508 (1%) Strand = Plus / Plus Query: 2 agcaaaactaaaggg-atgtggataaagggagggatgatagaaagaaggaagaggaaata 60 ||||||||||||||| |||| |||||| ||| |||||||||||||||||||||| ||||| Sbjct: 9113767 agcaaaactaaaggggatgtagataaaaggaaggatgatagaaagaaggaagag-aaata 9113825 Query: 61 aataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtga 120 | ||||||||| |||||| | |||||||||||||||||||||||||||| ||||||||| Sbjct: 9113826 agaaagatataggattccaatatgtatggtctatgaattacatcataaaaagcaatgtga 9113885 Query: 121 aaaagcatcaatataataaaactaatagagaatgaaaaattgtaacttga----aagaag 176 |||||||||||||||||||| ||| ||||||| || | |||| |||| || ||| Sbjct: 9113886 taaagcatcaatataataaaaataacagagaattcgaagtcgtaatttgattgaaacaag 9113945 Query: 177 aactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaa 236 || ||||||||| ||| ||||| ||||||| |||| |||||||||||||||||| || | Sbjct: 9113946 aaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactgagaaa-ttga 9114004 Query: 237 ctcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggaga 296 ||||||||||||||||||||||||||| ||||| |||||| ||||||||||| ||||||| Sbjct: 9114005 ctcggaaagaaattttttggaagctccattgcgagattcaaacctaaccattaaaggaga 9114064 Query: 297 agcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacac 356 |||||||||||||||||||||||||| | |||||||||| ||||||||||||| || || Sbjct: 9114065 agcagtgggaacgacagaacctatgactggataggattttcttgaaaagaatcccaatac 9114124 Query: 357 ttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaa 416 |||||||||||||||||||||||||||| |||||||||||| |||| |||| || Sbjct: 9114125 ttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgataaggttatgaa 9114184 Query: 417 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaat 476 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 9114185 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttattgaattagaat 9114244 Query: 477 actttaccgcgattcaataagagtaaaa 504 |||||||||||||||||||||||||||| Sbjct: 9114245 actttaccgcgattcaataagagtaaaa 9114272 Score = 85.7 bits (43), Expect = 2e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 542 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 601 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 9191265 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 9191324 Query: 602 tgactatatat 612 ||||||||||| Sbjct: 9191325 tgactatatat 9191335 Score = 85.7 bits (43), Expect = 2e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 542 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 601 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 9114312 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 9114371 Query: 602 tgactatatat 612 ||||||||||| Sbjct: 9114372 tgactatatat 9114382
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 559 bits (282), Expect = e-156 Identities = 453/508 (89%), Gaps = 7/508 (1%) Strand = Plus / Minus Query: 2 agcaaaactaaaggg-atgtggataaagggagggatgatagaaagaaggaagaggaaata 60 ||||||||||||||| |||| |||||| ||| |||||||||||||||||||||| ||||| Sbjct: 10370751 agcaaaactaaaggggatgtagataaaaggaaggatgatagaaagaaggaagag-aaata 10370693 Query: 61 aataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtga 120 | ||||||||| |||||| | |||||||||||||||||||||||||||| ||||||||| Sbjct: 10370692 agaaagatataggattccaatatgtatggtctatgaattacatcataaaaagcaatgtga 10370633 Query: 121 aaaagcatcaatataataaaactaatagagaatgaaaaattgtaacttga----aagaag 176 |||||||||||||||||||| ||| ||||||| || | |||| |||| || ||| Sbjct: 10370632 taaagcatcaatataataaaaataacagagaattcgaagtcgtaatttgattgaaacaag 10370573 Query: 177 aactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaa 236 || ||||||||| ||| ||||| ||||||| |||| |||||||||||||||||| || | Sbjct: 10370572 aaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactgagaaa-ttga 10370514 Query: 237 ctcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggaga 296 ||||||||||||||||||||||||||| ||||| |||||| ||||||||||| ||||||| Sbjct: 10370513 ctcggaaagaaattttttggaagctccattgcgagattcaaacctaaccattaaaggaga 10370454 Query: 297 agcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacac 356 |||||||||||||||||||||||||| | |||||||||| ||||||||||||| || || Sbjct: 10370453 agcagtgggaacgacagaacctatgactggataggattttcttgaaaagaatcccaatac 10370394 Query: 357 ttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaa 416 |||||||||||||||||||||||||||| |||||||||||| |||| |||| || Sbjct: 10370393 ttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgataaggttatgaa 10370334 Query: 417 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaat 476 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 10370333 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttattgaattagaat 10370274 Query: 477 actttaccgcgattcaataagagtaaaa 504 |||||||||||||||||||||||||||| Sbjct: 10370273 actttaccgcgattcaataagagtaaaa 10370246 Score = 85.7 bits (43), Expect = 2e-13 Identities = 64/71 (90%) Strand = Plus / Minus Query: 542 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 601 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 10370211 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 10370152 Query: 602 tgactatatat 612 ||||||||||| Sbjct: 10370151 tgactatatat 10370141
>dbj|AK058501.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-F04, full insert sequence Length = 547 Score = 559 bits (282), Expect = e-156 Identities = 453/508 (89%), Gaps = 7/508 (1%) Strand = Plus / Plus Query: 2 agcaaaactaaaggg-atgtggataaagggagggatgatagaaagaaggaagaggaaata 60 ||||||||||||||| |||| |||||| ||| |||||||||||||||||||||| ||||| Sbjct: 27 agcaaaactaaaggggatgtagataaaaggaaggatgatagaaagaaggaagag-aaata 85 Query: 61 aataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtga 120 | ||||||||| |||||| | |||||||||||||||||||||||||||| ||||||||| Sbjct: 86 agaaagatataggattccaatatgtatggtctatgaattacatcataaaaagcaatgtga 145 Query: 121 aaaagcatcaatataataaaactaatagagaatgaaaaattgtaacttga----aagaag 176 |||||||||||||||||||| ||| ||||||| |||| |||| |||| || ||| Sbjct: 146 taaagcatcaatataataaaaataacagagaattcgaaatcgtaatttgattgaaacaag 205 Query: 177 aactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaa 236 || ||||||||| ||| ||||| ||||||| |||| |||| ||||||||||||| || | Sbjct: 206 aaatacaaatttcaaggaataacaaagagcgtcccgagttagtaaaactgagaaa-ttga 264 Query: 237 ctcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggaga 296 ||||||||||||||||||||||||||| ||||| |||||| ||||||||||| ||||||| Sbjct: 265 ctcggaaagaaattttttggaagctccattgcgagattcaaacctaaccattaaaggaga 324 Query: 297 agcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacac 356 |||||||||||||||||||||||||| | |||||||||| ||||||||||||| || || Sbjct: 325 agcagtgggaacgacagaacctatgactggataggattttcttgaaaagaatcccaatac 384 Query: 357 ttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaa 416 |||||||||||||||||||||||||||| |||||||||||| |||| |||| || Sbjct: 385 ttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgataaggttatgaa 444 Query: 417 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaat 476 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 445 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttattgaattagaat 504 Query: 477 actttaccgcgattcaataagagtaaaa 504 |||||||||||||||||||||||||||| Sbjct: 505 actttaccgcgattcaataagagtaaaa 532
>gb|DQ289149.1| Oryza sativa ribosomal protein L16 (rpl16) gene, partial cds; chloroplast Length = 1103 Score = 559 bits (282), Expect = e-156 Identities = 453/508 (89%), Gaps = 7/508 (1%) Strand = Plus / Plus Query: 2 agcaaaactaaaggg-atgtggataaagggagggatgatagaaagaaggaagaggaaata 60 ||||||||||||||| |||| |||||| ||| |||||||||||||||||||||| ||||| Sbjct: 253 agcaaaactaaaggggatgtagataaaaggaaggatgatagaaagaaggaagag-aaata 311 Query: 61 aataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtga 120 | ||||||||| |||||| | |||||||||||||||||||||||||||| ||||||||| Sbjct: 312 agaaagatataggattccaatatgtatggtctatgaattacatcataaaaagcaatgtga 371 Query: 121 aaaagcatcaatataataaaactaatagagaatgaaaaattgtaacttga----aagaag 176 |||||||||||||||||||| ||| ||| ||| |||| |||| |||| || ||| Sbjct: 372 taaagcatcaatataataaaaataacagataattcgaaatcgtaatttgattgaaacaag 431 Query: 177 aactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaa 236 || ||||||||| ||| ||||| ||||||| |||| |||||||||||||||||| || | Sbjct: 432 aaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactgagaaa-ttga 490 Query: 237 ctcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggaga 296 ||||||||||||||||||||||||||| ||||| |||||| ||||||||||| ||||||| Sbjct: 491 ctcggaaagaaattttttggaagctccattgcgagattcaaacctaaccattaaaggaga 550 Query: 297 agcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacac 356 |||||||||||||||||||||||||| | |||||||||| ||||||||||||| || || Sbjct: 551 agcagtgggaacgacagaacctatgactggataggattttcttgaaaagaatcccaatac 610 Query: 357 ttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaa 416 |||||||||||||||||||||||||||| |||||||||||| |||| |||| || Sbjct: 611 ttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgataaggttatgaa 670 Query: 417 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaat 476 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 671 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttattgaattagaat 730 Query: 477 actttaccgcgattcaataagagtaaaa 504 |||||||||||||||||||||||||||| Sbjct: 731 actttaccgcgattcaataagagtaaaa 758 Score = 85.7 bits (43), Expect = 2e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 542 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 601 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 791 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 850 Query: 602 tgactatatat 612 ||||||||||| Sbjct: 851 tgactatatat 861
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 559 bits (282), Expect = e-156 Identities = 453/508 (89%), Gaps = 7/508 (1%) Strand = Plus / Minus Query: 2 agcaaaactaaaggg-atgtggataaagggagggatgatagaaagaaggaagaggaaata 60 ||||||||||||||| |||| |||||| ||| |||||||||||||||||||||| ||||| Sbjct: 10376790 agcaaaactaaaggggatgtagataaaaggaaggatgatagaaagaaggaagag-aaata 10376732 Query: 61 aataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtga 120 | ||||||||| |||||| | |||||||||||||||||||||||||||| ||||||||| Sbjct: 10376731 agaaagatataggattccaatatgtatggtctatgaattacatcataaaaagcaatgtga 10376672 Query: 121 aaaagcatcaatataataaaactaatagagaatgaaaaattgtaacttga----aagaag 176 |||||||||||||||||||| ||| ||||||| || | |||| |||| || ||| Sbjct: 10376671 taaagcatcaatataataaaaataacagagaattcgaagtcgtaatttgattgaaacaag 10376612 Query: 177 aactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaa 236 || ||||||||| ||| ||||| ||||||| |||| |||||||||||||||||| || | Sbjct: 10376611 aaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactgagaaa-ttga 10376553 Query: 237 ctcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggaga 296 ||||||||||||||||||||||||||| ||||| |||||| ||||||||||| ||||||| Sbjct: 10376552 ctcggaaagaaattttttggaagctccattgcgagattcaaacctaaccattaaaggaga 10376493 Query: 297 agcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacac 356 |||||||||||||||||||||||||| | |||||||||| ||||||||||||| || || Sbjct: 10376492 agcagtgggaacgacagaacctatgactggataggattttcttgaaaagaatcccaatac 10376433 Query: 357 ttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaa 416 |||||||||||||||||||||||||||| |||||||||||| |||| |||| || Sbjct: 10376432 ttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgataaggttatgaa 10376373 Query: 417 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaat 476 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 10376372 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttattgaattagaat 10376313 Query: 477 actttaccgcgattcaataagagtaaaa 504 |||||||||||||||||||||||||||| Sbjct: 10376312 actttaccgcgattcaataagagtaaaa 10376285 Score = 85.7 bits (43), Expect = 2e-13 Identities = 64/71 (90%) Strand = Plus / Minus Query: 542 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 601 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 10376250 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 10376191 Query: 602 tgactatatat 612 ||||||||||| Sbjct: 10376190 tgactatatat 10376180
>gb|DQ289158.1| Oryza australiensis k ribosomal protein L16 (rpl16) gene, partial cds; chloroplast Length = 1117 Score = 557 bits (281), Expect = e-155 Identities = 451/507 (88%), Gaps = 6/507 (1%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| ||| |||||||||||| ||||||||| |||||| Sbjct: 265 agcaaaactaaagggatgtggataaaaggaaggatgatagaaacaaggaagag-aaataa 323 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| | |||||||||||||||||||||||||||| ||||||||| Sbjct: 324 gaaagatataggattccaatatgtatggtctatgaattacatcataaaaagcaatgtgat 383 Query: 122 aaagcatcaatataataaaactaatagagaatgaaaaattgtaacttga----aagaaga 177 |||||||||||||||||||| ||| ||||||| |||| |||| |||| || |||| Sbjct: 384 aaagcatcaatataataaaaataacagagaattcgaaatcgtaatttgattgaaacaaga 443 Query: 178 actacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaac 237 | ||||||||| ||| ||||| ||||||| |||| |||||||||||||||||| || || Sbjct: 444 aatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactgagaaa-ttgac 502 Query: 238 tcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaa 297 |||||||||||||||||||||||||| ||||| ||||| ||||||||||| |||||||| Sbjct: 503 tcggaaagaaattttttggaagctccattgcgaaattcaaacctaaccattaaaggagaa 562 Query: 298 gcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacact 357 ||||||||||||||||||||||||| | |||||||||| ||||||||||||| || ||| Sbjct: 563 gcagtgggaacgacagaacctatgactggataggattttcttgaaaagaatcccaatact 622 Query: 358 tcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaat 417 ||||||||||||||||||||||||||| ||| |||||||| |||| |||| ||| Sbjct: 623 tcattgggtgggatggcggaacaaaccaaaaaaattgccttatttgataaggttatgaat 682 Query: 418 taacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaata 477 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| Sbjct: 683 taacaaataagacaggaaagagtaaatattcgcccgcgaaatttttattgaattaaaata 742 Query: 478 ctttaccgcgattcaataagagtaaaa 504 ||||||||||||||||||||||||||| Sbjct: 743 ctttaccgcgattcaataagagtaaaa 769 Score = 85.7 bits (43), Expect = 2e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 542 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 601 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 805 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 864 Query: 602 tgactatatat 612 ||||||||||| Sbjct: 865 tgactatatat 875
>gb|AY912206.1| Hickelia madagascariensis ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1108 Score = 555 bits (280), Expect = e-155 Identities = 414/460 (90%), Gaps = 12/460 (2%) Strand = Plus / Plus Query: 162 gtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataa 221 ||||||||||| ||||| ||||||||| || ||||||||||||||||||||||||||||| Sbjct: 400 gtaacttgaaacaagaaatacaaatttaaaacaataataaagagccgcccgggttaataa 459 Query: 222 aactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacct 281 ||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 460 aactgagaaaattgactcggaaagaaattttttggaagctccattgtgggattcagacct 519 Query: 282 aaccattcaaggagaagcagtgggaacgacagaacctatgattccataggattttattga 341 ||||||| ||||||||| ||||||||||||| ||||||||| | ||||||||||| |||| Sbjct: 520 aaccattaaaggagaagtagtgggaacgacaaaacctatgactgcataggattttcttga 579 Query: 342 aaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatt 401 |||||||||||| |||||||||||||||||||||||||||||| ||| |||||| Sbjct: 580 aaagaatcctaatacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatt 639 Query: 402 tggtaagtt-----tataaattaacaaataagacaggaaagagtaaatattcgcccgcga 456 ||||||| | |||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 640 tggtaaggttataatataaattaacaaataagacaggaaagagtaaattttcgcccgcga 699 Query: 457 aattcttattgaattagaatactttaccgcgattcaataagagtaaaaataaggatattt 516 ||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 700 aatctttattgaattagaatactttaccgcgattcaataagagtaaaaataaggagattt 759 Query: 517 ttt----agaaggactacattattatctataaatatagaatttagataaatatccacaca 572 ||| |||| || ||| |||||||||||||||||||| |||||||||| |||||| Sbjct: 760 tttgttaagaaagattac---attatctataaatatagaatatagataaatagacacaca 816 Query: 573 catctggatatattctagatcttcttttttgactatatat 612 ||||| ||||||||||||||||||||| |||||||||||| Sbjct: 817 catctagatatattctagatcttctttcttgactatatat 856 Score = 99.6 bits (50), Expect = 1e-17 Identities = 107/124 (86%), Gaps = 3/124 (2%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 ||||||||||| || ||||||||||| ||||||||||||||||||| |||| | ||| Sbjct: 226 agcaaaactaagggcatgtggataaaaggagggatgatagaaagaaagaaggg--aatnc 283 Query: 62 ataa-gatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtga 120 ||| ||||| | |||||| | |||||||||||||| ||||||||||||| ||||||||| Sbjct: 284 gtaatgatatgggattccaatatgtatggtctatgagttacatcataaaaagcaatgtga 343 Query: 121 aaaa 124 |||| Sbjct: 344 aaaa 347
>dbj|AK071967.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013084G06, full insert sequence Length = 1764 Score = 553 bits (279), Expect = e-154 Identities = 440/493 (89%), Gaps = 6/493 (1%) Strand = Plus / Plus Query: 16 gatgtggataaagggagggatgatagaaagaaggaagaggaaataaataagatatagaat 75 ||||| |||||| ||| |||||||||||||||||||||| |||||| ||||||||| || Sbjct: 1 gatgtagataaaaggaaggatgatagaaagaaggaagag-aaataagaaagatataggat 59 Query: 76 tccactgtgtatggtctatgaattacatcataaaaggcaatgtgaaaaagcatcaatata 135 |||| | |||||||||||||||||||||||||||| ||||||||| |||||||||||||| Sbjct: 60 tccaatatgtatggtctatgaattacatcataaaaagcaatgtgataaagcatcaatata 119 Query: 136 ataaaactaatagagaatgaaaaattgtaacttga----aagaagaactacaaattttaa 191 |||||| ||| ||||||| |||| |||| |||| || ||||| ||||||||| || Sbjct: 120 ataaaaataacagagaattcgaaatcgtaatttgattgaaacaagaaatacaaatttcaa 179 Query: 192 gcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaattt 251 | ||||| ||||||| |||| |||||||||||||||||| || |||||||||||||||| Sbjct: 180 ggaataacaaagagcgtcccgagttaataaaactgagaaa-ttgactcggaaagaaattt 238 Query: 252 tttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 311 |||||||||||| ||||| |||||| ||||||||||| |||||||||||||||||||||| Sbjct: 239 tttggaagctccattgcgagattcaaacctaaccattaaaggagaagcagtgggaacgac 298 Query: 312 agaacctatgattccataggattttattgaaaagaatcctaacacttcattgggtgggat 371 ||||||||||| | |||||||||| ||||||||||||| || ||||||||||||||||| Sbjct: 299 agaacctatgactggataggattttcttgaaaagaatcccaatacttcattgggtgggat 358 Query: 372 ggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaataagaca 431 ||||||||||||| |||||||||||| |||| |||| ||||||||||||||||| Sbjct: 359 ggcggaacaaaccaaaaaaattgtcttatttgataaggttatgaattaacaaataagaca 418 Query: 432 ggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgattc 491 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 419 ggaaagagtaaatattcgcccgcgaaatttttattgaattagaatactttaccgcgattc 478 Query: 492 aataagagtaaaa 504 ||||||||||||| Sbjct: 479 aataagagtaaaa 491 Score = 77.8 bits (39), Expect = 4e-11 Identities = 63/71 (88%) Strand = Plus / Plus Query: 542 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 601 |||||||||||| |||||| ||| || |||||||| ||||||||||||||| ||||| | Sbjct: 534 taaatatagaatatagatagataaacatacacatctagatatattctagatcctctttct 593 Query: 602 tgactatatat 612 ||||||||||| Sbjct: 594 tgactatatat 604
>gb|AY847095.1| Megastachya mucronata ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1154 Score = 551 bits (278), Expect = e-154 Identities = 455/513 (88%), Gaps = 5/513 (0%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| |||||||||||||| |||||||| | ||| ||| Sbjct: 238 agcaaaactaaagggatgtggataaaaggagggatgatagatagaaggaaaaagaa-taa 296 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 297 gaaagatataggattccaatgtgtatggtctatgaattacatcataaaaggcaatgtgat 356 Query: 122 aaagcatcaatataat---aaaactaatagagaatgaaaaattgtaacttgaaagaagaa 178 |||||||||||||||| |||| || ||||||| |||| ||||||| ||| || || Sbjct: 357 aaagcatcaatataattataaaaaaaagagagaattcgaaatcgtaacttcaaacaataa 416 Query: 179 ctacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaact 238 || |||||| ||||||||| ||||||| ||| || |||||||||||||||||||| ||| Sbjct: 417 ataaaaatttaaagcaataaaaaagagcagccgggattaataaaactgagaaaattgact 476 Query: 239 cggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaag 298 |||||| |||||||||||||||||| |||| ||||||| ||||||||||| ||||||||| Sbjct: 477 cggaaataaattttttggaagctccattgcaggattcaaacctaaccattaaaggagaag 536 Query: 299 cagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacactt 358 | |||||||||||| ||||||||| | |||||||||||||||||||||||||||| |||| Sbjct: 537 ctgtgggaacgacaaaacctatgactgcataggattttattgaaaagaatcctaatactt 596 Query: 359 cattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaatt 418 |||||||||||||||||||||||||| |||| |||||||||||| || |||||| Sbjct: 597 cattgggtgggatggcggaacaaaccaaaaaaattgttttatttggtaaggttttaaatt 656 Query: 419 aacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaatac 478 ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| Sbjct: 657 aacaaataagacaggaaagagtaaatattcgcccgcgaaatctttattggattagaatac 716 Query: 479 tttaccgcgattcaataagagtaaaaataagga 511 |||| | ||||||||||||| |||||| ||||| Sbjct: 717 ttta-cacgattcaataagaataaaaaaaagga 748 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Plus Query: 577 tggatatattctagatcttcttttttgactat 608 |||||||||||| |||||||||| |||||||| Sbjct: 788 tggatatattctggatcttctttcttgactat 819
>ref|XM_479425.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2380 Score = 551 bits (278), Expect = e-154 Identities = 452/508 (88%), Gaps = 7/508 (1%) Strand = Plus / Plus Query: 2 agcaaaactaaaggg-atgtggataaagggagggatgatagaaagaaggaagaggaaata 60 ||||||||||||||| |||| |||||| ||| |||||||||||||||||||||| ||||| Sbjct: 1861 agcaaaactaaaggggatgtagataaaaggaaggatgatagaaagaaggaagag-aaata 1919 Query: 61 aataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtga 120 | ||||||||| |||||| | |||||||||||||||||||||||||||| ||||||||| Sbjct: 1920 agaaagatataggattccaatatgtatggtctatgaattacatcataaaaagcaatgtga 1979 Query: 121 aaaagcatcaatataataaaactaatagagaatgaaaaattgtaacttga----aagaag 176 |||||||||||||||||||| ||| ||||||| |||| |||| |||| || ||| Sbjct: 1980 taaagcatcaatataataaaaataacagagaattcgaaatcgtaatttgattgaaacaag 2039 Query: 177 aactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaa 236 || || |||||| ||| ||||| |||||| |||| |||||||||||||||||| || | Sbjct: 2040 aaataaaaatttcaaggaataacaaagagagtcccgagttaataaaactgagaaa-ttga 2098 Query: 237 ctcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggaga 296 ||||||||||||||||||||||||||| ||||| |||||| ||||||||||| ||||||| Sbjct: 2099 ctcggaaagaaattttttggaagctccattgcgagattcaaacctaaccattaaaggaga 2158 Query: 297 agcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacac 356 |||||||||||||||||||||||||| | |||||||||| ||||||||||||| || || Sbjct: 2159 agcagtgggaacgacagaacctatgactggataggattttcttgaaaagaatcccaatac 2218 Query: 357 ttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaa 416 |||||||||||||||||||||||||||| |||||||||||| |||| |||| || Sbjct: 2219 ttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgataaggttatgaa 2278 Query: 417 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaat 476 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 2279 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttattgaattagaat 2338 Query: 477 actttaccgcgattcaataagagtaaaa 504 |||||||||||||||||||||||||||| Sbjct: 2339 actttaccgcgattcaataagagtaaaa 2366
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 551 bits (278), Expect = e-154 Identities = 453/508 (89%), Gaps = 8/508 (1%) Strand = Plus / Minus Query: 2 agcaaaactaaaggg-atgtggataaagggagggatgatagaaagaaggaagaggaaata 60 ||||||||||||||| |||| |||||| ||| |||||||||||||||||||||| ||||| Sbjct: 78948 agcaaaactaaaggggatgtagataaaaggaaggatgatagaaagaaggaagag-aaata 78890 Query: 61 aataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtga 120 | ||||||||| |||| | | |||||||||||||||||||||||||||| ||||||||| Sbjct: 78889 agaaagatataggattcaa-tatgtatggtctatgaattacatcataaaaagcaatgtga 78831 Query: 121 aaaagcatcaatataataaaactaatagagaatgaaaaattgtaacttga----aagaag 176 |||||||||||||||||||| ||| ||||||| |||| |||| |||| || ||| Sbjct: 78830 taaagcatcaatataataaaaataacagagaattcgaaatcgtaatttgattgaaacaag 78771 Query: 177 aactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaa 236 || ||||||||| ||| ||||| ||||||| |||| |||||||||||||||||| || | Sbjct: 78770 aaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactgagaaa-ttga 78712 Query: 237 ctcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggaga 296 ||||||||||||||||||||||||||| ||||| |||||| ||||||||||| ||||||| Sbjct: 78711 ctcggaaagaaattttttggaagctccattgcgagattcaaacctaaccattaaaggaga 78652 Query: 297 agcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacac 356 |||||||||||||||||||||||||| | |||||||||| ||||||||||||| || || Sbjct: 78651 agcagtgggaacgacagaacctatgactggataggattttcttgaaaagaatcccaatac 78592 Query: 357 ttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaa 416 |||||||||||||||||||||||||||| |||||||||||| |||| |||| || Sbjct: 78591 ttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgataaggttatgaa 78532 Query: 417 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaat 476 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 78531 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttattgaattagaat 78472 Query: 477 actttaccgcgattcaataagagtaaaa 504 |||||||||||||||||||||||||||| Sbjct: 78471 actttaccgcgattcaataagagtaaaa 78444 Score = 85.7 bits (43), Expect = 2e-13 Identities = 64/71 (90%) Strand = Plus / Minus Query: 542 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 601 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 78402 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 78343 Query: 602 tgactatatat 612 ||||||||||| Sbjct: 78342 tgactatatat 78332
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 551 bits (278), Expect = e-154 Identities = 452/508 (88%), Gaps = 7/508 (1%) Strand = Plus / Minus Query: 2 agcaaaactaaaggg-atgtggataaagggagggatgatagaaagaaggaagaggaaata 60 ||||||||||||||| |||| |||||| ||| |||||||||||||||||||||| ||||| Sbjct: 27924435 agcaaaactaaaggggatgtagataaaaggaaggatgatagaaagaaggaagag-aaata 27924377 Query: 61 aataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtga 120 | ||||||||| |||||| | |||||||||||||||||||||||||||| ||||||||| Sbjct: 27924376 agaaagatataggattccaatatgtatggtctatgaattacatcataaaaagcaatgtga 27924317 Query: 121 aaaagcatcaatataataaaactaatagagaatgaaaaattgtaacttga----aagaag 176 |||||||||||||||||||| ||| ||||||| |||| |||| |||| || ||| Sbjct: 27924316 taaagcatcaatataataaaaataacagagaattcgaaatcgtaatttgattgaaacaag 27924257 Query: 177 aactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaa 236 || || |||||| ||| ||||| |||||| |||| |||||||||||||||||| || | Sbjct: 27924256 aaataaaaatttcaaggaataacaaagagagtcccgagttaataaaactgagaaa-ttga 27924198 Query: 237 ctcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggaga 296 ||||||||||||||||||||||||||| ||||| |||||| ||||||||||| ||||||| Sbjct: 27924197 ctcggaaagaaattttttggaagctccattgcgagattcaaacctaaccattaaaggaga 27924138 Query: 297 agcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacac 356 |||||||||||||||||||||||||| | |||||||||| ||||||||||||| || || Sbjct: 27924137 agcagtgggaacgacagaacctatgactggataggattttcttgaaaagaatcccaatac 27924078 Query: 357 ttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaa 416 |||||||||||||||||||||||||||| |||||||||||| |||| |||| || Sbjct: 27924077 ttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgataaggttatgaa 27924018 Query: 417 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaat 476 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 27924017 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttattgaattagaat 27923958 Query: 477 actttaccgcgattcaataagagtaaaa 504 |||||||||||||||||||||||||||| Sbjct: 27923957 actttaccgcgattcaataagagtaaaa 27923930 Score = 85.7 bits (43), Expect = 2e-13 Identities = 64/71 (90%) Strand = Plus / Minus Query: 542 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 601 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 27923897 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 27923838 Query: 602 tgactatatat 612 ||||||||||| Sbjct: 27923837 tgactatatat 27923827
>dbj|AP005452.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0453E03 Length = 159980 Score = 551 bits (278), Expect = e-154 Identities = 452/508 (88%), Gaps = 7/508 (1%) Strand = Plus / Minus Query: 2 agcaaaactaaaggg-atgtggataaagggagggatgatagaaagaaggaagaggaaata 60 ||||||||||||||| |||| |||||| ||| |||||||||||||||||||||| ||||| Sbjct: 87793 agcaaaactaaaggggatgtagataaaaggaaggatgatagaaagaaggaagag-aaata 87735 Query: 61 aataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtga 120 | ||||||||| |||||| | |||||||||||||||||||||||||||| ||||||||| Sbjct: 87734 agaaagatataggattccaatatgtatggtctatgaattacatcataaaaagcaatgtga 87675 Query: 121 aaaagcatcaatataataaaactaatagagaatgaaaaattgtaacttga----aagaag 176 |||||||||||||||||||| ||| ||||||| |||| |||| |||| || ||| Sbjct: 87674 taaagcatcaatataataaaaataacagagaattcgaaatcgtaatttgattgaaacaag 87615 Query: 177 aactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaa 236 || || |||||| ||| ||||| |||||| |||| |||||||||||||||||| || | Sbjct: 87614 aaataaaaatttcaaggaataacaaagagagtcccgagttaataaaactgagaaa-ttga 87556 Query: 237 ctcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggaga 296 ||||||||||||||||||||||||||| ||||| |||||| ||||||||||| ||||||| Sbjct: 87555 ctcggaaagaaattttttggaagctccattgcgagattcaaacctaaccattaaaggaga 87496 Query: 297 agcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacac 356 |||||||||||||||||||||||||| | |||||||||| ||||||||||||| || || Sbjct: 87495 agcagtgggaacgacagaacctatgactggataggattttcttgaaaagaatcccaatac 87436 Query: 357 ttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaa 416 |||||||||||||||||||||||||||| |||||||||||| |||| |||| || Sbjct: 87435 ttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgataaggttatgaa 87376 Query: 417 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaat 476 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 87375 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttattgaattagaat 87316 Query: 477 actttaccgcgattcaataagagtaaaa 504 |||||||||||||||||||||||||||| Sbjct: 87315 actttaccgcgattcaataagagtaaaa 87288 Score = 85.7 bits (43), Expect = 2e-13 Identities = 64/71 (90%) Strand = Plus / Minus Query: 542 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 601 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 87255 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 87196 Query: 602 tgactatatat 612 ||||||||||| Sbjct: 87195 tgactatatat 87185
>dbj|AP003825.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1343_D04 Length = 143407 Score = 551 bits (278), Expect = e-154 Identities = 452/508 (88%), Gaps = 7/508 (1%) Strand = Plus / Minus Query: 2 agcaaaactaaaggg-atgtggataaagggagggatgatagaaagaaggaagaggaaata 60 ||||||||||||||| |||| |||||| ||| |||||||||||||||||||||| ||||| Sbjct: 13769 agcaaaactaaaggggatgtagataaaaggaaggatgatagaaagaaggaagag-aaata 13711 Query: 61 aataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtga 120 | ||||||||| |||||| | |||||||||||||||||||||||||||| ||||||||| Sbjct: 13710 agaaagatataggattccaatatgtatggtctatgaattacatcataaaaagcaatgtga 13651 Query: 121 aaaagcatcaatataataaaactaatagagaatgaaaaattgtaacttga----aagaag 176 |||||||||||||||||||| ||| ||||||| |||| |||| |||| || ||| Sbjct: 13650 taaagcatcaatataataaaaataacagagaattcgaaatcgtaatttgattgaaacaag 13591 Query: 177 aactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaa 236 || || |||||| ||| ||||| |||||| |||| |||||||||||||||||| || | Sbjct: 13590 aaataaaaatttcaaggaataacaaagagagtcccgagttaataaaactgagaaa-ttga 13532 Query: 237 ctcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggaga 296 ||||||||||||||||||||||||||| ||||| |||||| ||||||||||| ||||||| Sbjct: 13531 ctcggaaagaaattttttggaagctccattgcgagattcaaacctaaccattaaaggaga 13472 Query: 297 agcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacac 356 |||||||||||||||||||||||||| | |||||||||| ||||||||||||| || || Sbjct: 13471 agcagtgggaacgacagaacctatgactggataggattttcttgaaaagaatcccaatac 13412 Query: 357 ttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaa 416 |||||||||||||||||||||||||||| |||||||||||| |||| |||| || Sbjct: 13411 ttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgataaggttatgaa 13352 Query: 417 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaat 476 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 13351 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttattgaattagaat 13292 Query: 477 actttaccgcgattcaataagagtaaaa 504 |||||||||||||||||||||||||||| Sbjct: 13291 actttaccgcgattcaataagagtaaaa 13264 Score = 85.7 bits (43), Expect = 2e-13 Identities = 64/71 (90%) Strand = Plus / Minus Query: 542 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 601 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 13231 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 13172 Query: 602 tgactatatat 612 ||||||||||| Sbjct: 13171 tgactatatat 13161
>gb|DQ289159.1| Oryza granulata L ribosomal protein L16 (rpl16) gene, partial cds; chloroplast Length = 1142 Score = 543 bits (274), Expect = e-151 Identities = 454/512 (88%), Gaps = 12/512 (2%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||| ||||||||||||||||| ||| |||||||||||||||||||||| |||||| Sbjct: 256 agcaaaacaaaagggatgtggataaaaggaaggatgatagaaagaaggaagag-aaataa 314 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| | |||||||||||||||||||||||||||| ||||||||| Sbjct: 315 gaaagatataggattccaatatgtatggtctatgaattacatcataaaaagcaatgtgat 374 Query: 122 aaagcatcaatataataaaactaatagagaatgaaaaattgtaacttga----aagaaga 177 |||||||||||||||||||| ||| ||||||| |||| |||| |||| || |||| Sbjct: 375 aaagcatcaatataataaaaataacagagaattcgaaatcgtaatttgattgaaacaaga 434 Query: 178 actacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaac 237 | ||||||||| ||||||||| ||||||| ||||||||||||||||||||||| || || Sbjct: 435 aatacaaatttcaagcaataacaaagagcgtcccgggttaataaaactgagaaa-ttgac 493 Query: 238 tcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaa 297 |||||||||||||||||||||||||| ||||| |||||| ||||||||||| |||||||| Sbjct: 494 tcggaaagaaattttttggaagctccattgcgagattcaaacctaaccattaaaggagaa 553 Query: 298 gcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacact 357 ||||||||||||||||||||||||| | |||||||||| ||||||||||||| || ||| Sbjct: 554 gcagtgggaacgacagaacctatgactggataggattttcttgaaaagaatcccaatact 613 Query: 358 tcattgggtgggatggcggaacaaaccnnnnnnnttgtctta-----tttggtaagttta 412 ||||| ||||||||||||||||||||| ||| |||| |||| |||| ||| Sbjct: 614 tcatt-ggtgggatggcggaacaaaccaaaaaaattgccttatttgatttgataaggtta 672 Query: 413 taaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaatta 472 | |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 673 tgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttattgaatta 732 Query: 473 gaatactttaccgcgattcaataagagtaaaa 504 |||||||||||||||||||||||||||||||| Sbjct: 733 gaatactttaccgcgattcaataagagtaaaa 764 Score = 85.7 bits (43), Expect = 2e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 542 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 601 |||||||||||| |||||||||| || ||||| || ||||||||||||||||||||| | Sbjct: 821 taaatatagaatatagataaataaacatacacacctagatatattctagatcttctttct 880 Query: 602 tgactatatat 612 ||||||||||| Sbjct: 881 tgactatatat 891
>gb|AF133462.1|AF133462 Pariana radiciflora ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1262 Score = 543 bits (274), Expect = e-151 Identities = 464/522 (88%), Gaps = 11/522 (2%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||| ||||||||||||| ||||||||||||||||||| ||||||| ||||| Sbjct: 273 agcaaaactaaa-ggatgtggataaaaggagggatgatagaaagaaagaagagg-aataa 330 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| | |||||||||||||| ||||||||||||||||||||| | Sbjct: 331 gaaagatataggattccaatatgtatggtctatgagttacatcataaaaggcaatgtaat 390 Query: 122 aaagcatcaatataataaaactaatagagaatgaaaaattgtaacttgaaagaagaacta 181 ||||||||||||||| |||| ||||||||||| |||| ||||||||||| ||||| || Sbjct: 391 aaagcatcaatataa-aaaaataatagagaatttgaaatcgtaacttgaaacaagaaata 449 Query: 182 caaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcgg 241 ||||||| ||||||||||||||||| || |||||||| ||||||||||||||| |||||| Sbjct: 450 caaatttgaagcaataataaagagcagctcgggttaaaaaaactgagaaaattgactcgg 509 Query: 242 aaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcag 301 |||||||||||||| ||||||| ||| |||||||||||||||||||| ||||||||| || Sbjct: 510 aaagaaattttttgaaagctccattgtgggattcagacctaaccattaaaggagaagtag 569 Query: 302 tgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttcat 361 ||||||||| ||| ||||||| | ||||||||||| ||| ||||||| |||| ||||||| Sbjct: 570 tgggaacgatagagcctatgactgcataggatttttttggaaagaattctaatacttcat 629 Query: 362 tgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaac 421 ||||||||||||||||||||||| ||| |||||| |||| |||||||||||| Sbjct: 630 tgggtgggatggcggaacaaaccaaaaaaattgncttatt---taaggttataaattaac 686 Query: 422 aaataagacaggaaagagtaaatattcgcccgcgaaattcttatt--gaatt--agaata 477 |||||||||||||||||||||||||||||||||||||| |||||| ||||| |||||| Sbjct: 687 aaataagacaggaaagagtaaatattcgcccgcgaaatccttattaagaattaaagaata 746 Query: 478 ctttaccgcgattcaataagagtaaaaataaggatatttttt 519 ||||||||||||||||||||||| ||||||||| ||||||| Sbjct: 747 ctttaccgcgattcaataagagt-caaataaggagatttttt 787 Score = 111 bits (56), Expect = 3e-21 Identities = 74/80 (92%) Strand = Plus / Plus Query: 533 tattatctataaatatagaatttagataaatatccacacacatctggatatattctagat 592 ||||||||||||||||||||| |||||||||| |||| |||||| |||||||||||||| Sbjct: 807 tattatctataaatatagaatatagataaatagacacagacatctagatatattctagat 866 Query: 593 cttcttttttgactatatat 612 ||||||| |||||||||||| Sbjct: 867 cttctttcttgactatatat 886
>gb|U54740.1|PRU54740 Pariana radiciflora ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1102 Score = 543 bits (274), Expect = e-151 Identities = 464/522 (88%), Gaps = 11/522 (2%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||| ||| Sbjct: 250 agcaaaactaaagg-atgtggataaaaggagggatgatagaaagaaagaagaggaa-taa 307 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| | |||||||||||||| ||||||||||||||||||||| | Sbjct: 308 gaaagatataggattccaatatgtatggtctatgagttacatcataaaaggcaatgtaat 367 Query: 122 aaagcatcaatataataaaactaatagagaatgaaaaattgtaacttgaaagaagaacta 181 ||||||||||||||| |||| ||||||||||| |||| ||||||||||| ||||| || Sbjct: 368 aaagcatcaatataaaaaaa-taatagagaatttgaaatcgtaacttgaaacaagaaata 426 Query: 182 caaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcgg 241 ||||||| ||||||||||||||||| || |||||||| ||||||||||||||| |||||| Sbjct: 427 caaatttgaagcaataataaagagcagctcgggttaaaaaaactgagaaaattgactcgg 486 Query: 242 aaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcag 301 |||||||||||||| ||||||| ||| |||||||||||||||||||| ||||||||| || Sbjct: 487 aaagaaattttttgaaagctccattgtgggattcagacctaaccattaaaggagaagtag 546 Query: 302 tgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttcat 361 ||||||||| ||| ||||||| | ||||||||||| ||| ||||||| |||| ||||||| Sbjct: 547 tgggaacgatagagcctatgactgcataggatttttttggaaagaattctaatacttcat 606 Query: 362 tgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaac 421 ||||||||||||||||||||||| ||| |||||| |||| |||||||||||| Sbjct: 607 tgggtgggatggcggaacaaaccaaaaaaattgncttatt---taaggttataaattaac 663 Query: 422 aaataagacaggaaagagtaaatattcgcccgcgaaattcttatt--gaatt--agaata 477 |||||||||||||||||||||||||||||||||||||| |||||| ||||| |||||| Sbjct: 664 aaataagacaggaaagagtaaatattcgcccgcgaaatccttattaagaattaaagaata 723 Query: 478 ctttaccgcgattcaataagagtaaaaataaggatatttttt 519 ||||||||||||||||||||||| ||||||||| ||||||| Sbjct: 724 ctttaccgcgattcaataagagt-caaataaggagatttttt 764 Score = 111 bits (56), Expect = 3e-21 Identities = 74/80 (92%) Strand = Plus / Plus Query: 533 tattatctataaatatagaatttagataaatatccacacacatctggatatattctagat 592 ||||||||||||||||||||| |||||||||| |||| |||||| |||||||||||||| Sbjct: 784 tattatctataaatatagaatatagataaatagacacagacatctagatatattctagat 843 Query: 593 cttcttttttgactatatat 612 ||||||| |||||||||||| Sbjct: 844 cttctttcttgactatatat 863
>dbj|AK104024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-009-E05, full insert sequence Length = 485 Score = 539 bits (272), Expect = e-150 Identities = 433/486 (89%), Gaps = 6/486 (1%) Strand = Plus / Plus Query: 23 ataaagggagggatgatagaaagaaggaagaggaaataaataagatatagaattccactg 82 ||||| ||| |||||||||||||||||||||| |||||| ||||||||| |||||| | Sbjct: 1 ataaaaggaaggatgatagaaagaaggaagag-aaataagaaagatataggattccaata 59 Query: 83 tgtatggtctatgaattacatcataaaaggcaatgtgaaaaagcatcaatataataaaac 142 |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 60 tgtatggtctatgaattacatcataaaaagcaatgtgataaagcatcaatataataaaaa 119 Query: 143 taatagagaatgaaaaattgtaacttga----aagaagaactacaaattttaagcaataa 198 ||| ||||||| |||| |||| |||| || ||| | ||||||||| ||| ||||| Sbjct: 120 taacagagaattcgaaatcgtaatttgattgaaacaaggaatacaaatttcaaggaataa 179 Query: 199 taaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaattttttggaa 258 ||||||| |||| |||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 180 caaagagcgtcccgagttaataaaactgagaaa-ttgactcggaaagaaattttttggaa 238 Query: 259 gctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgacagaacct 318 ||||| ||||| |||||| ||||||||||| ||||||||||||||||||||||||||||| Sbjct: 239 gctccattgcgagattcaaacctaaccattaaaggagaagcagtgggaacgacagaacct 298 Query: 319 atgattccataggattttattgaaaagaatcctaacacttcattgggtgggatggcggaa 378 |||| | |||||||||| ||||||||||||| || |||||||||||||||||||||||| Sbjct: 299 atgactggataggattttcttgaaaagaatcccaatacttcattgggtgggatggcggaa 358 Query: 379 caaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaataagacaggaaaga 438 |||||| |||||||||||| |||| |||| |||||||||||||||||||||||| Sbjct: 359 caaaccaaaaaaattgtcttatttgataaggttatgaattaacaaataagacaggaaaga 418 Query: 439 gtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataaga 498 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 419 gtaaatattcgcccgcgaaatttttattgaattagaatactttaccgcgattcaataaga 478 Query: 499 gtaaaa 504 |||||| Sbjct: 479 gtaaaa 484
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 535 bits (270), Expect = e-149 Identities = 450/508 (88%), Gaps = 7/508 (1%) Strand = Plus / Plus Query: 2 agcaaaactaaaggg-atgtggataaagggagggatgatagaaagaaggaagaggaaata 60 ||||||||||||||| |||| |||||| ||| |||||||||||||||||||||| ||||| Sbjct: 23180156 agcaaaactaaaggggatgtagataaaaggaaggatgatagaaagaaggaagag-aaata 23180214 Query: 61 aataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtga 120 | ||||||||| |||||| | |||||||||||||||||||||||||||| ||||||||| Sbjct: 23180215 agaaagatataggattccaatatgtatggtctatgaattacatcataaaaagcaatgtga 23180274 Query: 121 aaaagcatcaatataataaaactaatagagaatgaaaaattgtaacttgaaagaa----g 176 |||||||||||||||||||| ||| ||||||| |||| |||| |||| ||| | Sbjct: 23180275 taaagcatcaatataataaaaataacagagaattcgaaatcgtaatttgattgaaacgag 23180334 Query: 177 aactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaa 236 || ||||||||| ||| ||||| ||||||| |||| |||||||||| ||||||| || | Sbjct: 23180335 aaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaagtgagaaa-ttga 23180393 Query: 237 ctcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggaga 296 ||||||||||||||||||||||||||| ||||| |||||| ||||||||||| ||||||| Sbjct: 23180394 ctcggaaagaaattttttggaagctccattgcgagattcaaacctaaccattaaaggaga 23180453 Query: 297 agcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacac 356 |||||||||||||||||||||||| | | |||||||||| ||||||||||||| || || Sbjct: 23180454 agcagtgggaacgacagaacctattactggataggattttcttgaaaagaatcccaatac 23180513 Query: 357 ttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaa 416 |||||||||||||||||||||||||||| |||||||||| | |||| |||| || Sbjct: 23180514 ttcattgggtgggatggcggaacaaaccaaaaaaattgtcttattcgataaggttatgaa 23180573 Query: 417 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaat 476 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 23180574 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttattgaattagaat 23180633 Query: 477 actttaccgcgattcaataagagtaaaa 504 |||||||||||||||||||||||||||| Sbjct: 23180634 actttaccgcgattcaataagagtaaaa 23180661 Score = 85.7 bits (43), Expect = 2e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 542 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 601 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 23180694 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 23180753 Query: 602 tgactatatat 612 ||||||||||| Sbjct: 23180754 tgactatatat 23180764
>dbj|AP004236.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0417D05 Length = 165752 Score = 535 bits (270), Expect = e-149 Identities = 450/508 (88%), Gaps = 7/508 (1%) Strand = Plus / Plus Query: 2 agcaaaactaaaggg-atgtggataaagggagggatgatagaaagaaggaagaggaaata 60 ||||||||||||||| |||| |||||| ||| |||||||||||||||||||||| ||||| Sbjct: 130804 agcaaaactaaaggggatgtagataaaaggaaggatgatagaaagaaggaagag-aaata 130862 Query: 61 aataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtga 120 | ||||||||| |||||| | |||||||||||||||||||||||||||| ||||||||| Sbjct: 130863 agaaagatataggattccaatatgtatggtctatgaattacatcataaaaagcaatgtga 130922 Query: 121 aaaagcatcaatataataaaactaatagagaatgaaaaattgtaacttgaaagaa----g 176 |||||||||||||||||||| ||| ||||||| |||| |||| |||| ||| | Sbjct: 130923 taaagcatcaatataataaaaataacagagaattcgaaatcgtaatttgattgaaacgag 130982 Query: 177 aactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaa 236 || ||||||||| ||| ||||| ||||||| |||| |||||||||| ||||||| || | Sbjct: 130983 aaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaagtgagaaa-ttga 131041 Query: 237 ctcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggaga 296 ||||||||||||||||||||||||||| ||||| |||||| ||||||||||| ||||||| Sbjct: 131042 ctcggaaagaaattttttggaagctccattgcgagattcaaacctaaccattaaaggaga 131101 Query: 297 agcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacac 356 |||||||||||||||||||||||| | | |||||||||| ||||||||||||| || || Sbjct: 131102 agcagtgggaacgacagaacctattactggataggattttcttgaaaagaatcccaatac 131161 Query: 357 ttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaa 416 |||||||||||||||||||||||||||| |||||||||| | |||| |||| || Sbjct: 131162 ttcattgggtgggatggcggaacaaaccaaaaaaattgtcttattcgataaggttatgaa 131221 Query: 417 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaat 476 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 131222 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttattgaattagaat 131281 Query: 477 actttaccgcgattcaataagagtaaaa 504 |||||||||||||||||||||||||||| Sbjct: 131282 actttaccgcgattcaataagagtaaaa 131309 Score = 85.7 bits (43), Expect = 2e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 542 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 601 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 131342 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 131401 Query: 602 tgactatatat 612 ||||||||||| Sbjct: 131402 tgactatatat 131412
>dbj|AP003623.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0642B07 Length = 139297 Score = 535 bits (270), Expect = e-149 Identities = 450/508 (88%), Gaps = 7/508 (1%) Strand = Plus / Plus Query: 2 agcaaaactaaaggg-atgtggataaagggagggatgatagaaagaaggaagaggaaata 60 ||||||||||||||| |||| |||||| ||| |||||||||||||||||||||| ||||| Sbjct: 14918 agcaaaactaaaggggatgtagataaaaggaaggatgatagaaagaaggaagag-aaata 14976 Query: 61 aataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtga 120 | ||||||||| |||||| | |||||||||||||||||||||||||||| ||||||||| Sbjct: 14977 agaaagatataggattccaatatgtatggtctatgaattacatcataaaaagcaatgtga 15036 Query: 121 aaaagcatcaatataataaaactaatagagaatgaaaaattgtaacttgaaagaa----g 176 |||||||||||||||||||| ||| ||||||| |||| |||| |||| ||| | Sbjct: 15037 taaagcatcaatataataaaaataacagagaattcgaaatcgtaatttgattgaaacgag 15096 Query: 177 aactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaa 236 || ||||||||| ||| ||||| ||||||| |||| |||||||||| ||||||| || | Sbjct: 15097 aaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaagtgagaaa-ttga 15155 Query: 237 ctcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggaga 296 ||||||||||||||||||||||||||| ||||| |||||| ||||||||||| ||||||| Sbjct: 15156 ctcggaaagaaattttttggaagctccattgcgagattcaaacctaaccattaaaggaga 15215 Query: 297 agcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacac 356 |||||||||||||||||||||||| | | |||||||||| ||||||||||||| || || Sbjct: 15216 agcagtgggaacgacagaacctattactggataggattttcttgaaaagaatcccaatac 15275 Query: 357 ttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaa 416 |||||||||||||||||||||||||||| |||||||||| | |||| |||| || Sbjct: 15276 ttcattgggtgggatggcggaacaaaccaaaaaaattgtcttattcgataaggttatgaa 15335 Query: 417 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaat 476 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 15336 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttattgaattagaat 15395 Query: 477 actttaccgcgattcaataagagtaaaa 504 |||||||||||||||||||||||||||| Sbjct: 15396 actttaccgcgattcaataagagtaaaa 15423 Score = 85.7 bits (43), Expect = 2e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 542 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 601 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 15456 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 15515 Query: 602 tgactatatat 612 ||||||||||| Sbjct: 15516 tgactatatat 15526
>gb|AY847088.1| Loudetia simplex ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1028 Score = 533 bits (269), Expect = e-148 Identities = 450/510 (88%), Gaps = 7/510 (1%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||| ||||||||||||| |||||||||||||| |||||||||| ||| ||| Sbjct: 203 agcaaaactaaaaggatgtggataaaaggagggatgatagatagaaggaagacgaa-taa 261 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 262 gaaagatataggattccaatgtgtatggtctatgaattacatcataaaaggcaatgtgat 321 Query: 122 aaagcatcaatataataaaactaatagagaatgaaaaattgtaacttgaaagaagaacta 181 |||||||||||||||||||| ||||| | || || || | | ||||||||| || || Sbjct: 322 aaagcatcaatataataaaa-taataaaaaaagagaattcgaaacttgaaacaaaaa--- 377 Query: 182 caaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcgg 241 || || ||||||||| ||||||| |||| |||| ||||||||||||||||| |||||| Sbjct: 378 --aaattaaagcaataaaaaagagcagccccggttgataaaactgagaaaattgactcgg 435 Query: 242 aaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcag 301 |||||||||||||||||||||| |||| ||||||| ||||||||||| || ||||||| | Sbjct: 436 aaagaaattttttggaagctccattgcaggattcaaacctaaccattaaaagagaagctg 495 Query: 302 tgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttcat 361 ||||||||||| ||||||||| | ||||||||||| || ||||||||||||| ||||||| Sbjct: 496 tgggaacgacaaaacctatgactgcataggatttttttaaaaagaatcctaatacttcat 555 Query: 362 tgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaac 421 ||||||||||||||||||||||| ||| |||||||||||| |||||||||||| Sbjct: 556 tgggtgggatggcggaacaaaccaaaaaacttgctttatttggtaaggttataaattaac 615 Query: 422 aaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaatacttt 481 |||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| Sbjct: 616 aaataagacaggaaagagtaaatattcgcccgcgaaatctttattggattagaatacttt 675 Query: 482 accgcgattcaataagagtaaaaataagga 511 | | ||||||||||||| |||||||||||| Sbjct: 676 atcacgattcaataagaataaaaataagga 705
>gb|AY847074.1| Merxmuellera macowanii ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1077 Score = 531 bits (268), Expect = e-148 Identities = 454/518 (87%), Gaps = 9/518 (1%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 ||||||||||| |||||||||||||| |||||||||||||| |||||||| || ||| Sbjct: 230 agcaaaactaacgggatgtggataaaaggagggatgatagatagaaggaatcataa-taa 288 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 | |||||| |||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 289 taataatataggattccaatgtgtatggtctatgaattacatcataaaaggcaatgtgat 348 Query: 122 aaagcatcaatat--------aataaaactaatagagaatgaaaaattgtaacttgaaag 173 ||||||||||||| ||||||| || ||||||| |||| |||||||||| Sbjct: 349 aaagcatcaatataataaaataataaaaaaaagagagaatttgaaatcataacttgaaac 408 Query: 174 aagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaat 233 || || || |||||| ||| ||||||||||||| |||||||||||||||||||||||||| Sbjct: 409 aataaataaaaatttaaagaaataataaagagcagcccgggttaataaaactgagaaaat 468 Query: 234 taactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaagg 293 | |||||||||||||||||||||||||||| |||| ||||||| ||||||||||| |||| Sbjct: 469 tgactcggaaagaaattttttggaagctccattgcaggattcaaacctaaccattaaagg 528 Query: 294 agaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaa 353 |||||| |||||||||||| ||||||||| | ||||||||||| |||||||||||||||| Sbjct: 529 agaagctgtgggaacgacaaaacctatgactgcataggattttcttgaaaagaatcctaa 588 Query: 354 cacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttat 413 |||||||||||||||||||||||||||||| ||| |||||||||||| |||| Sbjct: 589 tacttcattgggtgggatggcggaacaaacccccaaaattgctttatttggtaaggttat 648 Query: 414 aaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattag 473 |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| Sbjct: 649 aaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatctttattggattag 708 Query: 474 aatactttaccgcgattcaataagagtaaaaataagga 511 ||||||||||| ||||||||||||||||||||||||| Sbjct: 709 aatactttaccatgattcaataagagtaaaaataagga 746
>gb|AF133463.1|AF133463 Sucrea maculata ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1190 Score = 527 bits (266), Expect = e-146 Identities = 455/518 (87%), Gaps = 8/518 (1%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||| ||| Sbjct: 265 agcaaaactaaaaggatgtggataaaaggagggatgatagaaagcaggaagaggaa-taa 323 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| | || || ||||||||||||| ||||||||||||||||||||| | Sbjct: 324 gaaagatataggactctcctatgtatggtctatgggttacatcataaaaggcaatgtaat 383 Query: 122 aaagcatcaatataataaaactaatagagaatgaaaaattgtaacttgaaagaagaacta 181 |||||||||||||||| ||| ||||||||||| |||| ||||||||||| ||||| || Sbjct: 384 aaagcatcaatataatcaaaataatagagaattcgaaatcgtaacttgaaacaagaaata 443 Query: 182 caaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcgg 241 ||||||| |||||||||||| |||| | || ||||||||||||||||||||| |||||| Sbjct: 444 caaatttaaagcaataataaggagcaactcgagttaataaaactgagaaaattgactcgg 503 Query: 242 aaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcag 301 |||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||| || Sbjct: 504 aaagaaattttttggaagctccattgtgggattcagacctaaccattaaaggagaagtag 563 Query: 302 tgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttcat 361 ||||||||| ||||||||||| | ||||| ||| | ||| || |||| ||||||| Sbjct: 564 tgggaacgatagaacctatgactgcatagaattcttttg------attctaatacttcat 617 Query: 362 tgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaac 421 ||||| ||||||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 618 tgggtaggatggcggaacaaaccaaaaaaattgtcttatttggtaaggttataaattaac 677 Query: 422 aaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaatacttt 481 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 678 aaataagacaggaaagagtaaatattcgcccgcgaaatccttattgaattagaatacttt 737 Query: 482 accgcgattcaataagagtaaaaataaggatatttttt 519 || | |||||||||||||| ||||||||| ||||||| Sbjct: 738 actgtgattcaataagagt-caaataaggagatttttt 774 Score = 83.8 bits (42), Expect = 6e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 555 tagataaatatccacacacatctggatatattctagatcttcttttttgactatatat 612 |||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||| Sbjct: 804 tagataaatagacacacacatctagatatattctagatcttctttcttgactatatat 861
>gb|AY847091.1| Gynerium sagittatum ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1184 Score = 525 bits (265), Expect = e-146 Identities = 453/516 (87%), Gaps = 14/516 (2%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 ||||||||||||||||||| |||||| |||||||||||||| |||||||||| ||| ||| Sbjct: 236 agcaaaactaaagggatgtcgataaaaggagggatgatagatagaaggaagaagaa-taa 294 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaa----ggcaatg 117 ||||||||| |||||| ||||||||| |||||||||||||||||||| ||||||| Sbjct: 295 gaaagatataggattccaatgtgtatggcctatgaattacatcataaaaaaaaggcaatg 354 Query: 118 tgaaaaagcatcaatataa--------taaaactaatagagaatgaaaaattgtaacttg 169 ||| ||||||||||||||| ||||| || ||||||| |||| |||||||| Sbjct: 355 tgataaagcatcaatataataaaataataaaaaaaagagagaattcgaaatcgtaacttg 414 Query: 170 aaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgaga 229 ||| || || || |||||| ||||||||| ||||||| |||||||||||||||||||||| Sbjct: 415 aaacaataaataaaaatttaaagcaataaaaaagagcagcccgggttaataaaactgaga 474 Query: 230 aaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattc 289 ||||| |||||||||||||||||||||||||||| |||| ||||||| ||||||||||| Sbjct: 475 aaattgactcggaaagaaattttttggaagctccattgcaggattcaaacctaaccatta 534 Query: 290 aaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatc 349 |||||||||| |||||||||||| ||||||||| | |||||||||||||||||||||||| Sbjct: 535 aaggagaagctgtgggaacgacaaaacctatgactgcataggattttattgaaaagaatc 594 Query: 350 ctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagt 409 ||||||||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 595 ctaacacttcattgggtgggatggcggaacaaaccaaaaaaattgctttatttggtaagg 654 Query: 410 ttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaa 469 || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | Sbjct: 655 ttctaaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatccttattgga 714 Query: 470 ttagaatactttaccgcgattcaataagagtaaaaa 505 |||||| |||||| | ||||||||||||| |||||| Sbjct: 715 ttagaaaacttta-cacgattcaataagaataaaaa 749 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 577 tggatatattctagatcttcttttttgactatatat 612 ||||||||||||||||||||||| || ||||||||| Sbjct: 802 tggatatattctagatcttctttctttactatatat 837
>gb|AF133488.1|AF133488 Pharus lappulaceus ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1182 Score = 525 bits (265), Expect = e-146 Identities = 448/506 (88%), Gaps = 4/506 (0%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||| ||| Sbjct: 229 agcaaaactaaagggatgtggataaatggagggatgatagaaagaaagaataggaa-taa 287 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| | |||||||||||||||||||||||||||||||||||||| Sbjct: 288 gaaagatataggattccaatatgtatggtctatgaattacatcataaaaggcaatgtgat 347 Query: 122 aaagcatcaatataataaaactaatagagaatgaaaaattgtaacttgaaagaagaacta 181 |||||||||||||||||||| ||| |||||| |||| ||||||||||| ||||| || Sbjct: 348 aaagcatcaatataataaaaataactgagaattcgaaatcgtaacttgaaacaagaaata 407 Query: 182 caaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcgg 241 | || ||| ||||||||||||| ||| ||||||||||||||||||||||| |||||| Sbjct: 408 gga-ttaaaagaaataataaagagcagcctgggttaataaaactgagaaaattgactcgg 466 Query: 242 aaagaaatttt-ttggaagctccgttgcgggattcagacctaaccattcaaggagaagca 300 ||||||||||| ||||||||||| ||||||| |||||||||||||||| | ||||||||| Sbjct: 467 aaagaaattttgttggaagctccattgcggggttcagacctaaccattaatggagaagca 526 Query: 301 gtgggaacgacagaacctatgattccataggattttattgaaaa-gaatcctaacacttc 359 |||||||||||||||||||||| | |||| |||||| || |||| ||||||||| ||||| Sbjct: 527 gtgggaacgacagaacctatgactgcataagattttcttaaaaacgaatcctaatacttc 586 Query: 360 attgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaatta 419 ||||||||||||||||||||||||| ||| |||||||||||| ||||||||| Sbjct: 587 attgggtgggatggcggaacaaaccaaaaaaattgctttatttggtaaggttataaattg 646 Query: 420 acaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaatact 479 | ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| Sbjct: 647 atgaataagacaggaaagagtaaatattcgcccgcgaaatctttattggattagaatact 706 Query: 480 ttaccgcgattcaataagagtaaaaa 505 |||| | ||||||||||||||||||| Sbjct: 707 ttactgtgattcaataagagtaaaaa 732 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 556 agataaatatccacacacatctggatatattctagatcttcttttttgactatatat 612 ||||||||| ||||||| ||| ||||||||||| ||||||||| |||| ||||||| Sbjct: 779 agataaatagacacacacgtctagatatattctatatcttctttcttgattatatat 835
>gb|AY847073.1| Danthonia spicata ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1114 Score = 517 bits (261), Expect = e-143 Identities = 331/354 (93%), Gaps = 2/354 (0%) Strand = Plus / Plus Query: 106 taaaaggcaatgtgaaaaagcatcaatataataaaactaatagagaatgaaaaattgtaa 165 ||||||||||||||| |||||||||||||||||||| ||| ||||||| |||| |||| Sbjct: 283 taaaaggcaatgtgataaagcatcaatataataaaaataacagagaattcgaaatcgtaa 342 Query: 166 cttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaact 225 ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 343 cttgaaacaagaactacaaatttaaagcaataataaagagccgcccgggttaataaaact 402 Query: 226 gagaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacc 285 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 403 gagaaaattaactcggaaagaaattttttggaagctccattgcgggattcagacctaacc 462 Query: 286 attcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaag 345 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 463 attcaaggagaagcagtgggaacgacagaacctatgactccataggattttattgaaaag 522 Query: 346 aatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggt 405 |||||||| |||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 523 aatcctaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttggt 582 Query: 406 aagtttataaattaacaaataagacagg-aaagagtaaatattcgcccgcgaaa 458 ||| ||||||||||||||| |||||||| ||||||| ||||||||||||||||| Sbjct: 583 aaggttataaattaacaaaaaagacaggaaaagagt-aatattcgcccgcgaaa 635 Score = 111 bits (56), Expect = 3e-21 Identities = 56/56 (100%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaa 57 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 197 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaa 252 Score = 89.7 bits (45), Expect = 1e-14 Identities = 96/111 (86%), Gaps = 9/111 (8%) Strand = Plus / Plus Query: 472 agaatactttaccgcgattcaataagagtaaaaataaggatatttttt-----agaagga 526 |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 635 agaatactttaccgcgattcaataagagtaaaaataaggagattttttttttaagaagga 694 Query: 527 ctacattattatctataaatatagaatttagataaatatccacacacatct 577 ||| |||||||||||| ||||||| ||||||||| ||||||||||| Sbjct: 695 ttac---attatctataaa-atagaatatagataaatggacacacacatct 741
>gb|AY847084.1| Pennisetum setaceum ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1016 Score = 513 bits (259), Expect = e-142 Identities = 455/522 (87%), Gaps = 13/522 (2%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| |||||||||||||| |||||||||| ||| ||| Sbjct: 227 agcaaaactaaagggatgtggataaaaggagggatgatagatagaaggaagaagaa-taa 285 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaag----gcaatg 117 |||||||||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 286 gaaagatatagaattccaatgtgtatggtctatgaattacatcataaaaaaaaagcaatg 345 Query: 118 tgaaaaagcatcaatataa--------taaaactaatagagaatgaaaaattgtaacttg 169 | | ||||||||||||||| ||||| || ||||||| |||| |||||||| Sbjct: 346 ttataaagcatcaatataataaaataataaaaaaaagagagaattcgaaatcgtaacttg 405 Query: 170 aaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgaga 229 ||| || || | |||||| ||| ||||| ||||||| ||||| || ||||||||||||| Sbjct: 406 aaataaaaaatcaaaatttaaagaaataaaaaagagcagcccgcgtcaataaaactgaga 465 Query: 230 aaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattc 289 ||||| |||||||||||||||||||||||||||| |||| ||||||| ||||||||||| Sbjct: 466 aaattgactcggaaagaaattttttggaagctccattgcaggattcaaacctaaccatta 525 Query: 290 aaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatc 349 |||||||||| |||||||||||| ||||||||| ||| |||||||||||||||||||| Sbjct: 526 aaggagaagctgtgggaacgacaaaacctatgacgacatcggattttattgaaaagaatc 585 Query: 350 ctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagt 409 ||||||||||||||||||||||||||||||||||| ||| ||||||| |||| Sbjct: 586 ctaacacttcattgggtgggatggcggaacaaaccaaaaaaattgctttatttgataaga 645 Query: 410 ttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaa 469 || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | Sbjct: 646 ttctaaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatccttattgga 705 Query: 470 ttagaatactttaccgcgattcaataagagtaaaaataagga 511 ||||||||||||||| ||||||||||||| |||||||||||| Sbjct: 706 ttagaatactttaccacgattcaataagaataaaaataagga 747
>gb|AY847100.1| Chasmanthium sessiliflorum ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1142 Score = 505 bits (255), Expect = e-140 Identities = 422/479 (88%), Gaps = 7/479 (1%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||| ||||||| |||||||||||||| |||||||||| ||| ||| Sbjct: 212 agcaaaactaaagggatggggataaaaggagggatgatagatagaaggaagaagaa-taa 270 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 271 gaaagatataggattccaatgtgtatggtctatgaattacatcataaaaggcaatgtgat 330 Query: 122 aaagcatcaatataataaa------actaatagagaatgaaaaattgtaacttgaaagaa 175 ||||||||||||||||||| | || ||||||| |||| ||||||||||| || Sbjct: 331 aaagcatcaatataataaataaaaaaaaaagagagaattcgaaatcgtaacttgaaacaa 390 Query: 176 gaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaatta 235 || || |||||| ||||||||| ||||||| ||| ||||||||||||||||||||||| Sbjct: 391 taaataaaaatttaaagcaataaaaaagagcagccagggttaataaaactgagaaaattg 450 Query: 236 actcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggag 295 |||||||||||||||||||||||||||| |||| ||||||| ||||||||||| |||||| Sbjct: 451 actcggaaagaaattttttggaagctccattgcaggattcaaacctaaccattaaaggag 510 Query: 296 aagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaaca 355 |||| |||||||||| | ||||||||| | |||||||||||||||||||||||||||| | Sbjct: 511 aagctgtgggaacgagaaaacctatgactgcataggattttattgaaaagaatcctaata 570 Query: 356 cttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataa 415 |||||||||||||||||||| |||||||| || |||||||||||| |||||| Sbjct: 571 cttcattgggtgggatggcgaaacaaaccaaaaaaaatgctttatttggtaaggttataa 630 Query: 416 attaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattaga 474 |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 631 attaacaaataagacaggaaagagtaaatattcgcccgcgaaatctttattggattaga 689 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 577 tggatatattctagatcttcttttttgactat 608 ||||||||||||||||||||||| |||||||| Sbjct: 764 tggatatattctagatcttctttcttgactat 795
>gb|AY847099.1| Chasmanthium laxum rpl16 gene, intron; chloroplast Length = 1165 Score = 498 bits (251), Expect = e-137 Identities = 420/478 (87%), Gaps = 8/478 (1%) Strand = Plus / Plus Query: 4 caaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataaat 63 |||||||||||||||| ||||||| |||||||||||||| |||||||||| ||| ||| Sbjct: 234 caaaactaaagggatggggataaaaggagggatgatagatagaaggaagaagaa-taaga 292 Query: 64 aagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaaaa 123 ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| || Sbjct: 293 aagatataggattccaatgtgtatggtctatgaattacatcataaaaggcaatgtgataa 352 Query: 124 agcatcaatataata-------aaactaatagagaatgaaaaattgtaacttgaaagaag 176 ||||||||||||||| ||| || ||||||| |||| ||||||||||| || Sbjct: 353 agcatcaatataataaataaaaaaaaaaagagagaattcgaaatcgtaacttgaaacaat 412 Query: 177 aactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaa 236 || || |||||| ||||||||| ||||||| ||| ||||||||||||||||||||||| | Sbjct: 413 aaataaaaatttaaagcaataaaaaagagcagccagggttaataaaactgagaaaattga 472 Query: 237 ctcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggaga 296 ||||||||||||||||||||||||||| |||| ||||||| ||||||||||| ||||||| Sbjct: 473 ctcggaaagaaattttttggaagctccattgcaggattcaaacctaaccattaaaggaga 532 Query: 297 agcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacac 356 ||| |||||||||| | ||||||||| | |||||||||||||||||||||||||||| || Sbjct: 533 agctgtgggaacgagaaaacctatgactgcataggattttattgaaaagaatcctaatac 592 Query: 357 ttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaa 416 ||||||||||||||||||| |||||||| || |||||||||||| ||||||| Sbjct: 593 ttcattgggtgggatggcgaaacaaaccaaaaaaaatgctttatttggtaaggttataaa 652 Query: 417 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattaga 474 ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 653 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaatctttattggattaga 710 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 577 tggatatattctagatcttcttttttgactat 608 ||||||||||||||||||||||| |||||||| Sbjct: 786 tggatatattctagatcttctttcttgactat 817
>gb|AF133482.1|AF133482 Chasmanthium laxum ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1195 Score = 498 bits (251), Expect = e-137 Identities = 444/509 (87%), Gaps = 15/509 (2%) Strand = Plus / Plus Query: 4 caaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataaat 63 |||||||||||||||| ||||||| |||||||||||||| |||||||||| ||| ||| Sbjct: 260 caaaactaaagggatggggataaaaggagggatgatagatagaaggaagaagaa-taaga 318 Query: 64 aagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaaaa 123 ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| || Sbjct: 319 aagatataggattccaatgtgtatggtctatgaattacatcataaaaggcaatgtgataa 378 Query: 124 agcatcaatataata-------aaactaatagagaatgaaaaattgtaacttgaaagaag 176 ||||||||||||||| ||| || ||||||| |||| ||||||||||| || Sbjct: 379 agcatcaatataataaaataaaaaaaaaagagagaattcgaaatcgtaacttgaaacaat 438 Query: 177 aactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaa 236 || || |||||| ||||||||| ||||||| ||| ||||||||||||||||||||||| | Sbjct: 439 aaataaaaatttaaagcaataaaaaagagcagcctgggttaataaaactgagaaaattga 498 Query: 237 ctcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggaga 296 ||||||||||||||||||||||||||| |||| ||||||| ||||||||||| ||||||| Sbjct: 499 ctcggaaagaaattttttggaagctccattgcaggattcaaacctaaccattaaaggaga 558 Query: 297 agcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacac 356 ||| ||||||||| |||| |||||| | |||||||||||||||||||||||||||| || Sbjct: 559 agctgtgggaacg--agaatctatgactgcataggattttattgaaaagaatcctaatac 616 Query: 357 ttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaa 416 ||||||||||||||||||| |||||||| |||| |||||||||||| ||||||| Sbjct: 617 ttcattgggtgggatggcgaaacaaaccaaaaaaattgttttatttggtaaggttataaa 676 Query: 417 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaat 476 ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 677 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaatctttattggcttagaa- 735 Query: 477 actttaccgcgattcaataagagtaaaaa 505 ||||||||||||||||| |||||| Sbjct: 736 ----caccgcgattcaataagaataaaaa 760 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 577 tggatatattctagatcttcttttttgactat 608 ||||||||||||||||||||||| |||||||| Sbjct: 816 tggatatattctagatcttctttcttgactat 847
>gb|AY847089.1| Tristachya biseriata ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1150 Score = 496 bits (250), Expect = e-137 Identities = 445/510 (87%), Gaps = 7/510 (1%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| |||||||||||||| |||||||||| ||| ||| Sbjct: 234 agcaaaactaaagggatgtggataaaaggagggatgatagatagaaggaagaagaa-taa 292 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 293 gaaagatataggattccaatgtgtatggtctatgaattacatcataaaaggcaatgtgat 352 Query: 122 aaagcatcaatataataaaactaatagagaatgaaaaattgtaacttgaaagaagaacta 181 |||||||||| |||| |||| ||||| | || || || | | ||||||||| || || Sbjct: 353 aaagcatcaaaataaaaaaa-taataaaaaaagagaattcgaaacttgaaacaaaaa--- 408 Query: 182 caaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcgg 241 || || ||||||||| ||||||| |||| |||| ||||||||||||||||| |||||| Sbjct: 409 --aaattaaagcaataaaaaagagcagccccggttgataaaactgagaaaattgactcgg 466 Query: 242 aaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcag 301 |||||||||||||||||||||| |||| ||||||| ||||||||||| || ||||||| | Sbjct: 467 aaagaaattttttggaagctccattgcaggattcaaacctaaccattaaaagagaagctg 526 Query: 302 tgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttcat 361 ||||||||||| ||||||||| | |||||||||||||| ||||||||||||| ||||||| Sbjct: 527 tgggaacgacaaaacctatgactgcataggattttattaaaaagaatcctaatacttcat 586 Query: 362 tgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaac 421 |||| |||||||||||||||||| ||| |||||||||||| |||||||||||| Sbjct: 587 tgggcgggatggcggaacaaaccaaaaaaattgctttatttggtaaggttataaattaac 646 Query: 422 aaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaatacttt 481 ||||||||| | |||||||||||||||||| ||||||| |||||| ||||||||||||| Sbjct: 647 aaataagacngaaaagagtaaatattcgcctgcgaaatctttattggattagaatacttt 706 Query: 482 accgcgattcaataagagtaaaaataagga 511 | | ||||||||||| | |||||||||||| Sbjct: 707 atcacgattcaataaaaataaaaataagga 736 Score = 63.9 bits (32), Expect = 6e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 577 tggatatattctagatcttcttttttgactatatat 612 ||||||||||||||||||||||| |||||||||||| Sbjct: 778 tggatatattctagatcttctttcttgactatatat 813
>gb|AC120991.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0006J12, complete sequence Length = 157069 Score = 490 bits (247), Expect = e-135 Identities = 447/509 (87%), Gaps = 9/509 (1%) Strand = Plus / Plus Query: 2 agcaaaactaaaggg-atgtggataaagggagggatgatagaaagaaggaagaggaaata 60 ||||||||||||||| |||| |||||| ||| |||||||||||||||||||||| ||| | Sbjct: 144788 agcaaaactaaaggggatgtagataaaaggaaggatgatagaaagaaggaagagaaaaaa 144847 Query: 61 aataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtga 120 | ||||||||| |||||| | |||||||||||||||||||||||||||| ||||||||| Sbjct: 144848 ga-aagatataggattccaatatgtatggtctatgaattacatcataaaaagcaatgtga 144906 Query: 121 aaaagcatcaatataataaaactaatagagaatgaaaaattgtaacttga----aagaag 176 |||||||||||||||||||| ||| | ||||| |||| |||| |||| || ||| Sbjct: 144907 taaagcatcaatataataaaaataacaaagaattcgaaatcgtaatttgattgaaacaag 144966 Query: 177 aactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaa 236 || ||||||||| ||| ||||| ||||||| || | ||||||||| |||||||| || | Sbjct: 144967 aaatacaaatttcaaggaataacaaagagcgtcctgagttaataaa-ctgagaaa-ttga 145024 Query: 237 ctcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggaga 296 ||||||||||||||||||||||||||| ||||| |||||| ||||||||||| ||||||| Sbjct: 145025 ctcggaaagaaattttttggaagctccattgcgagattcaaacctaaccattaaaggaga 145084 Query: 297 agcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacac 356 ||||||||||| |||||||||||||| | |||||||||| ||||||| ||||| || || Sbjct: 145085 agcagtgggaatgacagaacctatgactggataggattttcttgaaaaaaatcccaatac 145144 Query: 357 ttcattgggtgggatggcggaacaaacc-nnnnnnnttgtcttatttggtaagtttataa 415 |||||||||||||||||||||||||||| |||||||||||| |||| |||| | Sbjct: 145145 ttcattgggtgggatggcggaacaaaccaaaaaaaattgtcttatttgataaggttatga 145204 Query: 416 attaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaa 475 |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| Sbjct: 145205 attaacaaataagacatgaaagagtaaatattcgcccgcgaaatttttattgaattagaa 145264 Query: 476 tactttaccgcgattcaataagagtaaaa 504 ||||||||||||||||||||||||||||| Sbjct: 145265 tactttaccgcgattcaataagagtaaaa 145293 Score = 79.8 bits (40), Expect = 1e-11 Identities = 65/72 (90%), Gaps = 1/72 (1%) Strand = Plus / Plus Query: 542 taaatatagaatttagataaatatccacacacatctggatatattctagatcttctttt- 600 |||||||||||| |||||||||| || |||||||| ||||||||||||||| |||||| Sbjct: 145326 taaatatagaatatagataaataaacatacacatctagatatattctagatcctcttttc 145385 Query: 601 ttgactatatat 612 |||||||||||| Sbjct: 145386 ttgactatatat 145397
>gb|AC104708.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1174_H11, complete sequence Length = 102567 Score = 490 bits (247), Expect = e-135 Identities = 447/509 (87%), Gaps = 9/509 (1%) Strand = Plus / Plus Query: 2 agcaaaactaaaggg-atgtggataaagggagggatgatagaaagaaggaagaggaaata 60 ||||||||||||||| |||| |||||| ||| |||||||||||||||||||||| ||| | Sbjct: 3975 agcaaaactaaaggggatgtagataaaaggaaggatgatagaaagaaggaagagaaaaaa 4034 Query: 61 aataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtga 120 | ||||||||| |||||| | |||||||||||||||||||||||||||| ||||||||| Sbjct: 4035 ga-aagatataggattccaatatgtatggtctatgaattacatcataaaaagcaatgtga 4093 Query: 121 aaaagcatcaatataataaaactaatagagaatgaaaaattgtaacttga----aagaag 176 |||||||||||||||||||| ||| | ||||| |||| |||| |||| || ||| Sbjct: 4094 taaagcatcaatataataaaaataacaaagaattcgaaatcgtaatttgattgaaacaag 4153 Query: 177 aactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaa 236 || ||||||||| ||| ||||| ||||||| || | ||||||||| |||||||| || | Sbjct: 4154 aaatacaaatttcaaggaataacaaagagcgtcctgagttaataaa-ctgagaaa-ttga 4211 Query: 237 ctcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggaga 296 ||||||||||||||||||||||||||| ||||| |||||| ||||||||||| ||||||| Sbjct: 4212 ctcggaaagaaattttttggaagctccattgcgagattcaaacctaaccattaaaggaga 4271 Query: 297 agcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacac 356 ||||||||||| |||||||||||||| | |||||||||| ||||||| ||||| || || Sbjct: 4272 agcagtgggaatgacagaacctatgactggataggattttcttgaaaaaaatcccaatac 4331 Query: 357 ttcattgggtgggatggcggaacaaacc-nnnnnnnttgtcttatttggtaagtttataa 415 |||||||||||||||||||||||||||| |||||||||||| |||| |||| | Sbjct: 4332 ttcattgggtgggatggcggaacaaaccaaaaaaaattgtcttatttgataaggttatga 4391 Query: 416 attaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaa 475 |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| Sbjct: 4392 attaacaaataagacatgaaagagtaaatattcgcccgcgaaatttttattgaattagaa 4451 Query: 476 tactttaccgcgattcaataagagtaaaa 504 ||||||||||||||||||||||||||||| Sbjct: 4452 tactttaccgcgattcaataagagtaaaa 4480 Score = 79.8 bits (40), Expect = 1e-11 Identities = 65/72 (90%), Gaps = 1/72 (1%) Strand = Plus / Plus Query: 542 taaatatagaatttagataaatatccacacacatctggatatattctagatcttctttt- 600 |||||||||||| |||||||||| || |||||||| ||||||||||||||| |||||| Sbjct: 4513 taaatatagaatatagataaataaacatacacatctagatatattctagatcctcttttc 4572 Query: 601 ttgactatatat 612 |||||||||||| Sbjct: 4573 ttgactatatat 4584
>gb|AY912215.1| Temochloa liliana ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1149 Score = 490 bits (247), Expect = e-135 Identities = 445/512 (86%), Gaps = 11/512 (2%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 ||||||||||||||||||||||||||||||||||||||||| |||||||||| || ||| Sbjct: 231 agcaaaactaaagggatgtggataaagggagggatgatagatagaaggaagaataa-taa 289 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 | ||||||| ||||| |||||||||||||||||| ||||||||||||||||||||| Sbjct: 290 gaaggatataggattcctatgtgtatggtctatgaatgacatcataaaaggcaatgtgat 349 Query: 122 aaagcatcaatataataaaactaatagagaatgaaaaattgtaacttgaaagaagaacta 181 |||||||||||| || |||| || | ||||| ||||| ||||||||||| || || || Sbjct: 350 aaagcatcaataaaaaaaaa--aagaaagaattcaaaatcgtaacttgaaacaataaata 407 Query: 182 caaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcgg 241 |||||| || ||||||||| |||| || |||||||||||||||||||||||| |||||| Sbjct: 408 aaaatttaaaacaataataaggagcagctcgggttaataaaactgagaaaattgactcgg 467 Query: 242 aaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcag 301 |||||||||||||||||||||| |||| ||||||| |||||| |||| || ||||||| | Sbjct: 468 aaagaaattttttggaagctccattgcaggattcaaacctaagcattaaaagagaagctg 527 Query: 302 tgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttcat 361 ||||||||||| ||||||||| ||||||||||||| |||||||||||||||| ||||||| Sbjct: 528 tgggaacgacaaaacctatgactccataggatttttttgaaaagaatcctaatacttcat 587 Query: 362 tgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaa- 420 ||||||||||||||||||||||| ||| |||||||||||| ||||||||||| Sbjct: 588 tgggtgggatggcggaacaaaccaaaaaaattgctttatttggtaaggttataaattaac 647 Query: 421 -------caaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattag 473 |||||||||||| |||||||||||||||||||||||||| |||||| ||| | Sbjct: 648 aaataagcaaataagacagtaaagagtaaatattcgcccgcgaaatctttattggatttg 707 Query: 474 aatactttaccgcgattcaataagagtaaaaa 505 ||||||||||| ||||| |||||||||||||| Sbjct: 708 aatactttaccacgatttaataagagtaaaaa 739
>gb|U54741.1|SMU54741 Sucrea maculata ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1030 Score = 482 bits (243), Expect = e-133 Identities = 426/487 (87%), Gaps = 8/487 (1%) Strand = Plus / Plus Query: 33 ggatgatagaaagaaggaagaggaaataaataagatatagaattccactgtgtatggtct 92 ||||||||||||| ||||||||||| ||| ||||||||| | || || |||||||||| Sbjct: 256 ggatgatagaaagcaggaagaggaa-taagaaagatataggactctcctatgtatggtct 314 Query: 93 atgaattacatcataaaaggcaatgtgaaaaagcatcaatataataaaactaatagagaa 152 ||| ||||||||||||||||||||| | |||||||||||||||| ||| |||||||||| Sbjct: 315 atgggttacatcataaaaggcaatgtaataaagcatcaatataatcaaaataatagagaa 374 Query: 153 tgaaaaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccg 212 | |||| ||||||||||| ||||| ||||||||| |||||||||||| |||| | || Sbjct: 375 ttcgaaatcgtaacttgaaacaagaaatacaaatttaaagcaataataaggagcaactcg 434 Query: 213 ggttaataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcggga 272 ||||||||||||||||||||| |||||||||||||||||||||||||||| ||| |||| Sbjct: 435 agttaataaaactgagaaaattgactcggaaagaaattttttggaagctccattgtggga 494 Query: 273 ttcagacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccatagga 332 |||||||||||||||| ||||||||| ||||||||||| ||||||||||| | ||||| | Sbjct: 495 ttcagacctaaccattaaaggagaagtagtgggaacgatagaacctatgactgcatagaa 554 Query: 333 ttttattgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnt 392 || | ||| || |||| |||||||||||| ||||||||||||||||| | Sbjct: 555 ttcttttg------attctaatacttcattgggtaggatggcggaacaaaccaaaaaaat 608 Query: 393 tgtcttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgccc 452 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 609 tgtcttatttggtaaggttataaattaacaaataagacaggaaagagtaaatattcgccc 668 Query: 453 gcgaaattcttattgaattagaatactttaccgcgattcaataagagtaaaaataaggat 512 ||||||| ||||||||||||||||||||||| | |||||||||||||| ||||||||| Sbjct: 669 gcgaaatccttattgaattagaatactttactgtgattcaataagagt-caaataaggag 727 Query: 513 atttttt 519 ||||||| Sbjct: 728 atttttt 734 Score = 83.8 bits (42), Expect = 6e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 555 tagataaatatccacacacatctggatatattctagatcttcttttttgactatatat 612 |||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||| Sbjct: 764 tagataaatagacacacacatctagatatattctagatcttctttcttgactatatat 821
>gb|AY847096.1| Bromuniola gossweileri rpl16 gene, intron; chloroplast Length = 557 Score = 476 bits (240), Expect = e-131 Identities = 417/478 (87%), Gaps = 8/478 (1%) Strand = Plus / Plus Query: 4 caaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataaat 63 |||||||||| ||||| ||||||| |||||||| ||||| |||||||||| ||| ||| Sbjct: 45 caaaactaaaaggatggggataaaaggagggatnatagatagaaggaagaagaa-taaga 103 Query: 64 aagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaaaa 123 ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| || Sbjct: 104 aagatataggattccaatgtgtatggtctatgaattacatcataaaaggcaatgtgataa 163 Query: 124 agcatcaatataata-------aaactaatagagaatgaaaaattgtaacttgaaagaag 176 ||| ||||||||||| ||| || ||||||| |||| ||||||||||| || Sbjct: 164 agcctcaatataataaataaaaaaaaaaagagagaattcgaaatcgtaacttgaaacaat 223 Query: 177 aactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaa 236 || || |||||| ||||||||| ||||||| ||| ||||||||||||||||||||||| | Sbjct: 224 aaataaaaatttaaagcaataaaaaagagcagccagggttaataaaactgagaaaattga 283 Query: 237 ctcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggaga 296 ||||||||||||||||||||||||||| |||| ||||||| ||||||||||| ||||||| Sbjct: 284 ctcggaaagaaattttttggaagctccattgcaggattcaaacctaaccattaaaggaga 343 Query: 297 agcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacac 356 ||| |||||||||| | ||||||||| | |||||||||||||||||||||||||||| || Sbjct: 344 agctgtgggaacgagaaaacctatgactgcataggattttattgaaaagaatcctaatac 403 Query: 357 ttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaa 416 ||||||||||||||||||| |||||||| || |||||||||||| ||||||| Sbjct: 404 ttcattgggtgggatggcgaaacaaaccaaaaaaaatgctttatttggtaaggttataaa 463 Query: 417 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattaga 474 ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 464 ttaacaaataagacaggaaagagtaaatattcgcccgcgaaatctttattggattaga 521
>gb|AY847085.1| Arundinella hirta ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1186 Score = 472 bits (238), Expect = e-130 Identities = 447/516 (86%), Gaps = 21/516 (4%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| |||||||||||||| |||||||||| ||| ||| Sbjct: 234 agcaaaactaaagggatgtggataaaaggagggatgatagatagaaggaagaagaa-taa 292 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaa----ggcaatg 117 ||||||||| |||||| ||||||||| |||||||||||||||||||| ||||||| Sbjct: 293 gaaagatataggattccaatgtgtatgg-ctatgaattacatcataaaaaaaaggcaatg 351 Query: 118 tgaaaaagcatcaatataa--------taaaactaatagagaatgaaaaattgtaacttg 169 ||| ||||||||||||||| ||||| || ||||||| |||| |||||||| Sbjct: 352 tgataaagcatcaatataataaaataataaaaaaaagagagaattcgaaatcgtaacttg 411 Query: 170 aaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgaga 229 ||| || || || |||| | ||||||||| ||||||| ||| |||||||||||||||||| Sbjct: 412 aaacaacaaataaaaatataaagcaataaaaaagagcagcc-gggttaataaaactgaga 470 Query: 230 aaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattc 289 ||||| |||||||||||||||||||||||||||| |||| ||||||| ||||||||||| Sbjct: 471 aaattgactcggaaagaaattttttggaagctccattgcaggattcaaacctaaccatta 530 Query: 290 aaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatc 349 |||||||||| |||||||||||| ||||||||| | |||||||||||||||||||||||| Sbjct: 531 aaggagaagctgtgggaacgacaaaacctatgactacataggattttattgaaaagaatc 590 Query: 350 ctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagt 409 ||||||||||||||||||||||||||||||||||| ||| ||||||| ||| Sbjct: 591 ctaacacttcattgggtgggatggcggaacaaaccaaaaaaattgctttatttgataaag 650 Query: 410 ttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaa 469 || ||||||||||||||||||||||||||||||||||||||||||||||| || | Sbjct: 651 ttctaaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatcct------a 704 Query: 470 ttagaatactttaccgcgattcaataagagtaaaaa 505 ||||||||||||||| ||||||||||||| |||||| Sbjct: 705 ttagaatactttaccacgattcaataagaataaaaa 740 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 580 atatattctagatcttcttttttgactatatat 612 |||||||||||||||||||| |||||||||||| Sbjct: 797 atatattctagatcttctttcttgactatatat 829
>gb|AY847090.1| Isachne arundinacea ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1101 Score = 470 bits (237), Expect = e-129 Identities = 447/516 (86%), Gaps = 10/516 (1%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| |||||||||||||| |||| ||||| ||| ||| Sbjct: 202 agcaaaactaaagggatgtggataaaaggagggatgatagatagaaagaagaagaa-taa 260 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| ||||| ||||||||||||||| |||||| ||||||||||||||||| Sbjct: 261 gaaagatataggattcctatgtgtatggtctatggattacaccataaaaggcaatgtgat 320 Query: 122 aaagca-------tcaatataataaaactaatagagaatgaaaaattgtaacttgaaaga 174 |||||| | || ||||||||| ||| ||||||| |||| ||||| ||||| | Sbjct: 321 aaagcacaatatattaaaataataaaaataagagagaattcgaaatagtaacctgaaaca 380 Query: 175 agaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaatt 234 | || | ||||| |||||||||||| ||| ||||| ||||||||||||||||||||| Sbjct: 381 aaaaaaa-aaattaaaagcaataataaggagtagcccgtgttaataaaactgagaaaatt 439 Query: 235 aactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaagga 294 |||||||||||||||||||||||||||| |||| ||||||| |||||| |||| ||||| Sbjct: 440 gactcggaaagaaattttttggaagctccattgcaggattcaaacctaaacattaaagga 499 Query: 295 gaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaac 354 ||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||| Sbjct: 500 gaagctgtgggaacgacaaaacctatgacagcataggattttattgaaaagaatcctaat 559 Query: 355 acttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttata 414 |||||||| | ||||||||||||||||||| ||| |||||||||||| ||||| Sbjct: 560 acttcattagatgggatggcggaacaaaccaaaaaaattgctttatttggtaag-ttata 618 Query: 415 aattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattaga 474 ||||||||||||||||||||||||||||| ||||||||||||||| |||||| |||||| Sbjct: 619 aattaacaaataagacaggaaagagtaaaaattcgcccgcgaaatctttattggattaga 678 Query: 475 atactttaccgcgattcaataagagtaaaaataagg 510 |||||||||| ||||||||||||||||||||||||| Sbjct: 679 atactttaccacgattcaataagagtaaaaataagg 714 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 572 acatctggatatattctagatcttcttttttgactatatat 612 |||| |||||||||| |||||||||||| | ||||||||| Sbjct: 754 acatttggatatattatagatcttctttctaaactatatat 794
>gb|AY847080.1| Sporobolus indicus ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1023 Score = 462 bits (233), Expect = e-127 Identities = 449/523 (85%), Gaps = 19/523 (3%) Strand = Plus / Plus Query: 5 aaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataaata 64 ||||||||| ||||||||||||| ||||||||||||||||||||||||| ||| ||| | Sbjct: 229 aaaactaaacggatgtggataaaaggagggatgatagaaagaaggaagaagaa-taagaa 287 Query: 65 agatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaaaaa 124 ||||||| |||||| | || ||||||||||||||||||||||||||||||||||| ||| Sbjct: 288 agatataagattccaatatggatggtctatgaattacatcataaaaggcaatgtgataaa 347 Query: 125 gcatcaatataataaa--------actaatagagaatgaaaaattgtaacttgaaagaag 176 |||||||||||||||| | ||| ||||||| |||| |||| |||||| || Sbjct: 348 gcatcaatataataaaataataaaaataagagagaattttaaatcgtaatttgaaacaat 407 Query: 177 aactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaa 236 || || |||||| ||||||||||||||||| |||||| |||||||||||||||||||||| Sbjct: 408 aaataaaaatttaaagcaataataaagagcagcccggattaataaaactgagaaaattaa 467 Query: 237 ctcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggaga 296 |||| |||| |||||||||||| |||| ||||||| ||||||||||| ||||||| Sbjct: 468 ctcgaaaag------tttggaagctccattgcaggattcaaacctaaccattaaaggaga 521 Query: 297 agcagtgggaacgacagaacctatgattccatag----gattttattgaaaagaatccta 352 ||| |||||||||||| ||||||||| | ||||| |||||||||||||||||||||| Sbjct: 522 agctgtgggaacgacaaaacctatgactgcataggattgattttattgaaaagaatccta 581 Query: 353 acacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagttta 412 | |||||||||||||||||||||||||||||| ||| |||||||||||| ||| Sbjct: 582 atacttcattgggtgggatggcggaacaaaccaaaaaaattgctttatttggtaaggtta 641 Query: 413 taaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaatta 472 ||||||||||||||||||| ||||||||||||||||||||||||||| |||||| |||| Sbjct: 642 taaattaacaaataagacaagaaagagtaaatattcgcccgcgaaatctttattggatta 701 Query: 473 gaatactttaccgcgattcaataagagtaaaaataaggatatt 515 ||||||||||| ||||||||||| |||||| ||||||||| Sbjct: 702 gaatactttactatgattcaataaggttaaaaaaaaggatatt 744
>gb|AY847107.1| Zeugites hackelii ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1073 Score = 460 bits (232), Expect = e-126 Identities = 403/462 (87%), Gaps = 9/462 (1%) Strand = Plus / Plus Query: 4 caaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataaat 63 |||||||||||||||||||||||| ||||||||||||| |||||||| | ||| ||| Sbjct: 238 caaaactaaagggatgtggataaaaggagggatgataggtagaaggaaaaagaa-taaga 296 Query: 64 aagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaaaa 123 ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| || Sbjct: 297 aagatataggattccaatgtgtatggtctatgaattacatcataaaaggcaatgtgataa 356 Query: 124 agcatcaat--------ataataaaactaatagagaatgaaaaattgtaacttgaaagaa 175 ||||||||| |||| |||| || ||||||| |||| ||||||||||| || Sbjct: 357 agcatcaatataataaaataagaaaaaaaagagagaattcgaaatcgtaacttgaaacaa 416 Query: 176 gaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaatta 235 || || |||||| ||||||||| ||||||| ||||||||||||||||||||||||||| Sbjct: 417 taaataaaaatttcaagcaataaaaaagagcagcccgggttaataaaactgagaaaattg 476 Query: 236 actcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggag 295 |||||||||||||||||||||||||||| |||| ||||||| ||||||||||| |||||| Sbjct: 477 actcggaaagaaattttttggaagctccattgcaggattcaaacctaaccattaaaggag 536 Query: 296 aagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaaca 355 |||| |||||||||| | ||||||||| | ||||||||||||||||||||||||||| | Sbjct: 537 aagctgtgggaacgaaaaaacctatgactggataggattttattgaaaagaatcctaata 596 Query: 356 cttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataa 415 ||||||||||||||||||||||||||||| | | |||||||||||| |||||| Sbjct: 597 cttcattgggtgggatggcggaacaaaccaaaaaaatggctttatttggtaaggttataa 656 Query: 416 attaacaaataagacaggaaagagtaaatattcgcccgcgaa 457 |||| ||||||||||||||||||||||| ||||||||||||| Sbjct: 657 attaccaaataagacaggaaagagtaaacattcgcccgcgaa 698
>gb|AY847076.1| Aristida purpurea var. curvifolia ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1112 Score = 456 bits (230), Expect = e-125 Identities = 435/502 (86%), Gaps = 4/502 (0%) Strand = Plus / Plus Query: 4 caaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataaat 63 |||||||||||||||||||||||| |||||||||||| | |||||||||| || ||| Sbjct: 228 caaaactaaagggatgtggataaaaggagggatgatacatagaaggaagaataa-taaga 286 Query: 64 aagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaaaa 123 | || ||| ||||| ||||||||| |||||||| ||||||||||||||||||||| || Sbjct: 287 aggacttaggattcctatgtgtatgggctatgaatgacatcataaaaggcaatgtgataa 346 Query: 124 agcatcaatataataaaactaatagagaatgaaaaattgtaacttgaaagaagaactaca 183 |||||||| | || |||| || | ||||| ||||| ||||||||||| || || || | Sbjct: 347 agcatcaaaaaaaaaaaa--aagaaagaattcaaaatcgtaacttgaaacaataaataaa 404 Query: 184 aattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaa 243 ||||| || ||||||||| |||| || |||||||||||||||||||||||| |||||||| Sbjct: 405 aatttaaaacaataataaggagcagctcgggttaataaaactgagaaaattgactcggaa 464 Query: 244 agaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtg 303 |||||||||||||||||||| |||| ||||||| |||||| |||| || ||||||| ||| Sbjct: 465 agaaattttttggaagctccattgcaggattcaaacctaagcattaaaagagaagctgtg 524 Query: 304 ggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttcattg 363 ||||||||| ||||||||| ||||||||||||| |||||||||||||||| ||||||||| Sbjct: 525 ggaacgacaaaacctatgactccataggatttttttgaaaagaatcctaatacttcattg 584 Query: 364 ggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaa 423 ||||||||||||||||||||| ||| |||||||||||| |||||||||||||| Sbjct: 585 ggtgggatggcggaacaaaccaaaaaaattgctttatttggtaaggttataaattaacaa 644 Query: 424 ataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttac 483 ||||||||| |||||||||||||| ||||||||||| |||||| ||| |||||||||| Sbjct: 645 ataagacagtaaagagtaaatatttgcccgcgaaatctttattggatttgaatacttta- 703 Query: 484 cgcgattcaataagagtaaaaa 505 | ||||| |||||||||||||| Sbjct: 704 cacgatttaataagagtaaaaa 725
>gb|AY847075.1| Karroochloa purpurea ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1053 Score = 454 bits (229), Expect = e-124 Identities = 434/502 (86%), Gaps = 7/502 (1%) Strand = Plus / Plus Query: 4 caaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataaat 63 ||||| |||| ||||||||||||| |||||||||||||| |||||||||| || ||| Sbjct: 228 caaaagtaaaaggatgtggataaaaggagggatgatagatagaaggaagaataa-taaga 286 Query: 64 aagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaaaa 123 | ||||||| |||||| ||||||||||||||||||||||||||||||||||||||| || Sbjct: 287 aggatataggattccaacgtgtatggtctatgaattacatcataaaaggcaatgtgataa 346 Query: 124 agcatcaatataataaaactaatagagaatgaaaaattgtaacttgaaagaagaactaca 183 |||||||||| |||| || ||||||| |||||||||||||||| || | | | Sbjct: 347 agcatcaata----aaaa--aagagagaatttgaaattgtaacttgaaacaactaatcaa 400 Query: 184 aattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaa 243 |||| ||| ||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 401 aattgaaagaaataataaagagcagcccgggttaataaaactgagaaaattaactcgaaa 460 Query: 244 agaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtg 303 ||||||||||| |||||||| |||| ||||||| ||||||||||| |||||||||| || Sbjct: 461 agaaatttttttgaagctccattgcaggattcaaacctaaccattaaaggagaagctatg 520 Query: 304 ggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttcattg 363 ||||||||| ||||||||| | |||||||||||||||||||||||||||| || |||| | Sbjct: 521 ggaacgacaaaacctatgactgcataggattttattgaaaagaatcctaatacatcatcg 580 Query: 364 ggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaa 423 ||||||||||||||||||||| ||| ||||||||||| |||||||||||||| Sbjct: 581 ggtgggatggcggaacaaaccccaaaacttgctttatttggtaaaattataaattaacaa 640 Query: 424 ataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttac 483 |||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||| Sbjct: 641 ataagacaggaaagagtaaatattcgcccgcgaaatatttattggattcgaatactttac 700 Query: 484 cgcgattcaataagagtaaaaa 505 ||||||||||| |||||| Sbjct: 701 tataattcaataagactaaaaa 722
>gb|AF133481.1|AF133481 Chloris distichophylla ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1180 Score = 452 bits (228), Expect = e-124 Identities = 441/513 (85%), Gaps = 21/513 (4%) Strand = Plus / Plus Query: 6 aaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataaataa 65 |||| ||||||||||||||||| |||||||||||||| |||||||||| ||| ||| || Sbjct: 261 aaacaaaagggatgtggataaaaggagggatgatagatagaaggaagaagaa-taagaaa 319 Query: 66 gatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaaaaag 125 |||||| |||||| |||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 320 gatataagattccaatgtgtatggtctatgaattacatcataaaaggcaatgtgataaag 379 Query: 126 catcaatataat--------aaaactaatagagaatgaaaaattgtaactt--gaaagaa 175 |||||||||||| |||| ||| ||||||| ||||| |||| || |||| || Sbjct: 380 catcaatataataaaataataaaaataagagagaatttaaaatcgtaatttttgaaacaa 439 Query: 176 gaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaatta 235 || || |||||| ||||||||||||||||| |||| ||||||||||||| ||||||||| Sbjct: 440 taaataaaaatttgaagcaataataaagagcagcccaggttaataaaactaagaaaatta 499 Query: 236 actcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggag 295 |||||||||| ||||||| ||||||||| ||||||| ||||||||||| |||||| Sbjct: 500 actcggaaag------tttggaaactccgttgcaggattcaaacctaaccattaaaggag 553 Query: 296 aagcagtgggaacgacagaacctatgattccataggatt----ttattgaaaagaatcct 351 |||| |||||||||||| ||||||||| | ||||||||| ||||||||||||||||| Sbjct: 554 aagctgtgggaacgacaaaacctatgactgcataggattgattttattgaaaagaatcct 613 Query: 352 aacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagttt 411 || ||||||||||| |||||||||||||||||| |||||||||||| |||| || Sbjct: 614 aatacttcattgggcgggatggcggaacaaaccaaaaaaattgtcttatttgataaggtt 673 Query: 412 ataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaatt 471 |||||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||| Sbjct: 674 ataaattaacaaataagacaagaaagagtaaatattcgcccgcgaaatctttattggatt 733 Query: 472 agaatactttaccgcgattcaataagagtaaaa 504 |||||||||||| ||||||||||| |||||| Sbjct: 734 agaatactttactatgattcaataagggtaaaa 766 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 577 tggatatattctagatcttcttttttgactatatat 612 ||||||||||||||||||||||| || ||||||||| Sbjct: 820 tggatatattctagatcttctttctttactatatat 855
>gb|AY847109.1| Zeugites munroanus ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 952 Score = 450 bits (227), Expect = e-123 Identities = 411/473 (86%), Gaps = 5/473 (1%) Strand = Plus / Plus Query: 6 aaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataaataa 65 |||| ||||||||||||||||| ||||||||||||| |||||||| | ||| ||| || Sbjct: 122 aaacaaaagggatgtggataaaaggagggatgataggtagaaggaaaaagaa-taagaaa 180 Query: 66 gatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaaaaag 125 ||||||| ||||| |||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 181 gatataggattcccatgtgtatggtctatgaattacatcataaaaggcaatgtgataaag 240 Query: 126 catcaatataataa----aactaatagagaatgaaaaattgtaacttgaaagaagaacta 181 |||||||||||||| || || ||||||| |||| ||||||||||| || || || Sbjct: 241 catcaatataataagaaaaaaaaagagagaatttgaaatcgtaacttgaaacaataaata 300 Query: 182 caaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcgg 241 |||||| ||||||||| ||||||| ||||| ||||||||||||||||||||| |||||| Sbjct: 301 aaaatttcaagcaataaaaaagagcagcccgagttaataaaactgagaaaattgactcgg 360 Query: 242 aaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcag 301 |||||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||| | Sbjct: 361 aaagaaattttttggaagctccattgcaggattcaaacctaaccattaaaggagaagctg 420 Query: 302 tgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttcat 361 ||||||||| | ||||||||| | |||||||||||| |||||||||||||| ||||||| Sbjct: 421 tgggaacgaaaaaacctatgactagataggattttatggaaaagaatcctaatacttcat 480 Query: 362 tgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaac 421 ||||||||||||||||||||||| | | |||||||||||| |||||||||||| Sbjct: 481 tgggtgggatggcggaacaaaccaaaaaaatggctttatttggtaaggttataaattaac 540 Query: 422 aaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattaga 474 ||||||| |||||||||||||| |||| |||||||||| |||||| |||||| Sbjct: 541 aaataaggcaggaaagagtaaacattcccccgcgaaatctttattggattaga 593
>gb|AY847108.1| Zeugites mexicanus ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1056 Score = 450 bits (227), Expect = e-123 Identities = 411/473 (86%), Gaps = 5/473 (1%) Strand = Plus / Plus Query: 6 aaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataaataa 65 |||| ||||||||||||||||| ||||||||||||| |||||||| | ||| ||| || Sbjct: 232 aaacaaaagggatgtggataaaaggagggatgataggtagaaggaaaaagaa-taagaaa 290 Query: 66 gatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaaaaag 125 ||||||| ||||| |||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 291 gatataggattcccatgtgtatggtctatgaattacatcataaaaggcaatgtgataaag 350 Query: 126 catcaatataat----aaaactaatagagaatgaaaaattgtaacttgaaagaagaacta 181 |||||||||||| |||| || ||||||| |||| ||||||||||| || || || Sbjct: 351 catcaatataattagaaaaaaaaagagagaattcgaaatcgtaacttgaaacaataaata 410 Query: 182 caaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcgg 241 |||||| ||||||||| ||||||| ||||| ||||||||||||||||||||| || ||| Sbjct: 411 aaaatttaaagcaataaaaaagagcagcccgagttaataaaactgagaaaattgacccgg 470 Query: 242 aaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcag 301 |||||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||| | Sbjct: 471 aaagaaattttttggaagctccattgcaggattcaaacctaaccattaaaggagaagctg 530 Query: 302 tgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttcat 361 ||||||||| | ||||||||| | |||||||||||| |||||||||||||| ||||||| Sbjct: 531 tgggaacgaaaaaacctatgactggataggattttatggaaaagaatcctaatacttcat 590 Query: 362 tgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaac 421 ||||||||||||||||||||||| | | |||||||||||| |||||||||||| Sbjct: 591 tgggtgggatggcggaacaaaccaaaaaaatggctttatttggtaaggttataaattaac 650 Query: 422 aaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattaga 474 ||||||| |||||||||||||| ||||||||||||||| |||||| |||||| Sbjct: 651 aaataaggcaggaaagagtaaacattcgcccgcgaaatctttattggattaga 703
>gb|AF133464.1|AF133464 Lithachne pauciflora ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1189 Score = 448 bits (226), Expect = e-122 Identities = 436/506 (86%), Gaps = 8/506 (1%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 254 agcaaaactaaaaggatgtggataaaaggagggatgatagaaagaaggaagaggaa-taa 312 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||| ||| | ||| |||||||||||||| ||||||||||||||||||||| | Sbjct: 313 taaagatgtaggactcccacatgtatggtctatgagttacatcataaaaggcaatgtaat 372 Query: 122 aaagcatcaatataataaaactaatagagaatgaaaaattgtaacttgaaagaagaacta 181 |||||||||||||||||||| || |||||||| |||| ||||||||||| ||||| || Sbjct: 373 aaagcatcaatataataaaaatattagagaatttgaaatcgtaacttgaaacaagaaata 432 Query: 182 caaattttaagcaata-----ataaagagccgcccgggttaataaaactgagaaaattaa 236 ||||||||||||||| |||| |||| | ||||||||||||||||||||||| | Sbjct: 433 taaattttaagcaatacaataataaggagcaactggggttaataaaactgagaaaattga 492 Query: 237 ctcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggaga 296 ||| |||||| ||||||||||| |||| ||| || ||||||||||||||||| ||||||| Sbjct: 493 ctcagaaagatattttttggaaactccattgtggaattcagacctaaccattaaaggaga 552 Query: 297 agcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacac 356 || ||||||||||| ||||||||||| | |||| ||||| ||||||||||| |||| | Sbjct: 553 agtagtgggaacgatagaacctatgactgtatagaatttttttgaaaagaattctaattc 612 Query: 357 ttcatt--gggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttata 414 |||||| ||| |||||||||||||||||| ||||||||||| ||||| ||||| Sbjct: 613 ttcattaggggagggatggcggaacaaaccaaaaaaattgtcttatttagtaaggttata 672 Query: 415 aattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattaga 474 ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| | || Sbjct: 673 aattaacaaataagataggaaagagtaaatattcgcccgcgaaatccttattgaagtgga 732 Query: 475 atactttaccgcgattcaataagagt 500 | ||||||| |||||||||||||||| Sbjct: 733 aaactttactgcgattcaataagagt 758 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 570 acacatctggatatattctagatcttcttttttgactatatat 612 |||||||| ||||||||||||||||| ||| |||||||||||| Sbjct: 802 acacatctagatatattctagatcttttttcttgactatatat 844
>gb|AF133490.1|AF133490 Streptochaeta angustifolia ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1243 Score = 446 bits (225), Expect = e-122 Identities = 444/514 (86%), Gaps = 9/514 (1%) Strand = Plus / Plus Query: 10 taaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataaataagata 69 |||||||||||||||||| ||||||||||||||||||| ||| ||||| ||| |||||| Sbjct: 296 taaagggatgtggataaatggagggatgatagaaagaaagaacaggaa-taagaaagata 354 Query: 70 tagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaaaaagcatc 129 ||| |||||| | ||||||||| |||||||||||||||||||||| ||||| |||||||| Sbjct: 355 taggattccaatatgtatggtccatgaattacatcataaaaggcagtgtgataaagcatc 414 Query: 130 aatataataaaactaatagagaatgaaaaattgtaacttgaaagaagaactacaaatttt 189 ||||||||| || ||| |||||| |||| ||||||||||| ||||| || || | Sbjct: 415 aatataatataaataactgagaattccaaatcgtaacttgaaacaagaaatagaa-tgaa 473 Query: 190 aagcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaat 249 ||| ||||||||||||| || |||||||||||||||||||||| |||||||||||||| Sbjct: 474 aagaaataataaagagcaacctgggttaataaaactgagaaaatggactcggaaagaaat 533 Query: 250 ttt-ttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaac 308 ||| ||||||||||| |||| || |||||||||||||||| |||||||| |||||||| Sbjct: 534 tttgttggaagctccattgcagggttcagacctaaccattagtggagaagctgtgggaac 593 Query: 309 gacagaacctatgattccataggattttattgaaaa-gaatcctaacacttcattgggtg 367 |||||||||||||| | ||||||||||||||||||| ||||||||| ||||||||||||| Sbjct: 594 gacagaacctatgactacataggattttattgaaaacgaatcctaatacttcattgggtg 653 Query: 368 ggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaataa 427 ||||||||||||||||| ||| |||||||||||| || | |||| || ||||| Sbjct: 654 ggatggcggaacaaaccaaaaaaattgctttatttggtaaggttttgaattgacgaataa 713 Query: 428 gacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaa-----tacttta 482 |||||||||||||||||||||||||||||||| |||||| |||| || ||||||| Sbjct: 714 gacaggaaagagtaaatattcgcccgcgaaatctttattggattacaatactttacttta 773 Query: 483 ccgcgattcaataagagtaaaaataaggatattt 516 ||| ||||||||||||||||||||||||| |||| Sbjct: 774 ccgtgattcaataagagtaaaaataaggagattt 807 Score = 44.1 bits (22), Expect = 0.53 Identities = 49/58 (84%) Strand = Plus / Plus Query: 555 tagataaatatccacacacatctggatatattctagatcttcttttttgactatatat 612 |||||||||| |||| |||||| |||| ||| || |||||||| |||||||||||| Sbjct: 844 tagataaatagacacagacatctagatagattttatctcttctttcttgactatatat 901
>gb|AY847110.1| Zeugites pringlei ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1060 Score = 442 bits (223), Expect = e-121 Identities = 404/465 (86%), Gaps = 5/465 (1%) Strand = Plus / Plus Query: 14 gggatgtggataaagggagggatgatagaaagaaggaagaggaaataaataagatataga 73 |||||||||||||| ||||||||||||| |||||||| | ||| ||| ||||||||| Sbjct: 244 gggatgtggataaaaggagggatgataggtagaaggaaaaagaa-taagaaagatatagt 302 Query: 74 attccactgtgtatggtctatgaattacatcataaaaggcaatgtgaaaaagcatcaata 133 |||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 303 attccaatgtgtatggtctatgaattacatcataaaaggcaatgtgataaagcatcaata 362 Query: 134 taataa----aactaatagagaatgaaaaattgtaacttgaaagaagaactacaaatttt 189 |||||| || || ||||||| |||| ||||||||||| || || || |||||| Sbjct: 363 taataagaaaaaaaaagagagaattcgaaatcgtaacttgaaacaataaataaaaattta 422 Query: 190 aagcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaat 249 ||||||||| ||||||| ||||| ||||||||||||||||||||| || ||||||||||| Sbjct: 423 aagcaataaaaaagagcagcccgagttaataaaactgagaaaattgacccggaaagaaat 482 Query: 250 tttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacg 309 |||||||||||||| |||| ||||||| ||||||||||| |||||||||| ||||||||| Sbjct: 483 tttttggaagctccattgcaggattcaaacctaaccattaaaggagaagctgtgggaacg 542 Query: 310 acagaacctatgattccataggattttattgaaaagaatcctaacacttcattgggtggg 369 | | ||||||||| | |||||||||||| |||||||||||||| ||||||||||||||| Sbjct: 543 aaaaaacctatgactggataggattttatggaaaagaatcctaatacttcattgggtggg 602 Query: 370 atggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaataaga 429 ||||||||||||||| | | |||||||||||| || |||||||||||||||| Sbjct: 603 atggcggaacaaaccaaaaaaatggctttatttggtaagattttaaattaacaaataagg 662 Query: 430 caggaaagagtaaatattcgcccgcgaaattcttattgaattaga 474 |||||||||||||| ||||||||||||||| |||||| |||||| Sbjct: 663 caggaaagagtaaacattcgcccgcgaaatctttattggattaga 707
>gb|AF133484.1|AF133484 Phragmites australis ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1199 Score = 432 bits (218), Expect = e-118 Identities = 292/319 (91%) Strand = Plus / Plus Query: 190 aagcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaat 249 |||||||||||| |||| || ||||||||||||||||||||||| |||||||||||||| Sbjct: 459 aagcaataataaggagcaaccggggttaataaaactgagaaaattgactcggaaagaaat 518 Query: 250 tttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacg 309 |||||||||||||| |||| ||||||| ||||||||||| |||||||||| ||||||||| Sbjct: 519 tttttggaagctccattgcaggattcaaacctaaccattaaaggagaagctgtgggaacg 578 Query: 310 acagaacctatgattccataggattttattgaaaagaatcctaacacttcattgggtggg 369 ||| ||||||||| | |||||||||||||| ||||||||||||| ||||||||||||||| Sbjct: 579 acaaaacctatgactgcataggattttattcaaaagaatcctaatacttcattgggtggg 638 Query: 370 atggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaataaga 429 ||||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 639 atggcggaacaaaccaaaaaaattgtcttatttggtaaggttataaattaacaaataaga 698 Query: 430 caggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgat 489 |||||||||||||||||||||||||||||| |||||| |||||||||||||||| |||| Sbjct: 699 caggaaagagtaaatattcgcccgcgaaatctttattggattagaatactttaccacgat 758 Query: 490 tcaataagagtaaaaataa 508 ||||||||||||||||||| Sbjct: 759 tcaataagagtaaaaataa 777 Score = 198 bits (100), Expect = 2e-47 Identities = 131/140 (93%), Gaps = 1/140 (0%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| |||||||||||||| |||||||||| ||| ||| Sbjct: 260 agcaaaactaaagggatgtggataaaaggagggatgatagatagaaggaagaagaa-taa 318 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 319 gaaagatataggattccaatgtgtatggtctatgaattacatcataaaaggcaatgtgat 378 Query: 122 aaagcatcaatataataaaa 141 |||||||||||||||||||| Sbjct: 379 aaagcatcaatataataaaa 398 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 580 atatattctagatcttcttttttgactatatat 612 |||||||||||||||||||| |||||||||||| Sbjct: 830 atatattctagatcttctttcttgactatatat 862
>dbj|AK059459.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-C07, full insert sequence Length = 352 Score = 430 bits (217), Expect = e-117 Identities = 307/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Plus Query: 167 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 226 |||||| ||||| ||||||||| ||| ||||| ||||||| |||| ||||||||||||| Sbjct: 1 ttgaaacaagaaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactg 60 Query: 227 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 286 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 61 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 119 Query: 287 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 346 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 120 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaga 179 Query: 347 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 406 |||| || |||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 180 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgata 239 Query: 407 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 466 || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 240 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttatt 299 Query: 467 gaattagaatactttaccgcgattcaataagagtaaaa 504 |||||||||||||||||||||||||||||||||||||| Sbjct: 300 gaattagaatactttaccgcgattcaataagagtaaaa 337
>gb|AF133479.1|AF133479 Eleusine indica ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1091 Score = 428 bits (216), Expect = e-117 Identities = 444/521 (85%), Gaps = 21/521 (4%) Strand = Plus / Plus Query: 4 caaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataaat 63 |||||||||||||||||||||||| |||||||||||||| |||||||||| ||| ||| Sbjct: 263 caaaactaaagggatgtggataaaaggagggatgatagatagaaggaagaagaa-taaga 321 Query: 64 aagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaaaa 123 |||||||| |||||| |||||||||||||||||||||||||||||||||||||||| || Sbjct: 322 aagatataagattccaatgtgtatggtctatgaattacatcataaaaggcaatgtgataa 381 Query: 124 agcatcaata--------taataaaactaatagagaatgaaaaattgtaactt--gaaag 173 |||||||||| |||||||| ||| ||||||| ||||| ||| || |||| Sbjct: 382 agcatcaatataataaaataataaaaataagagagaatttaaaatcataatttttgaaac 441 Query: 174 aagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaat 233 || || || |||||||||||||||||||||||| |||| ||||||||||||| ||||||| Sbjct: 442 aataaataaaaattttaagcaataataaagagcagcccaggttaataaaactaagaaaat 501 Query: 234 taactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaagg 293 |||||||||||| ||||||||||||||||| ||||||| ||||||||||| |||| Sbjct: 502 taactcggaaagtttaagtttggaagctccgttgcaggattcaaacctaaccattaaagg 561 Query: 294 agaagcagtgggaacgacagaacctatgattccatag----gattttattgaaaagaatc 349 |||||| |||||||||||| ||||||||| | ||||| ||||||||||||||||||| Sbjct: 562 agaagctgtgggaacgacaaaacctatgactgcataggattgattttattgaaaagaatc 621 Query: 350 ctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggt---- 405 |||| ||||||||||| |||||||||||||||||| |||| ||||||| | Sbjct: 622 ctaatacttcattgggcgggatggcggaacaaaccaaaaaaattgttttatttgatttta 681 Query: 406 --aagtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattctt 463 ||| |||||||||||||||||||||| ||||||||||||||||||||||||||| || Sbjct: 682 ataaggttataaattaacaaataagacaagaaagagtaaatattcgcccgcgaaatcttt 741 Query: 464 attgaattagaatactttaccgcgattcaataagagtaaaa 504 |||| ||||||||||||||| ||||||||||| |||||| Sbjct: 742 attggattagaatactttactatgattcaataagggtaaaa 782 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 578 ggatatattctagatcttcttttttgactatatat 612 |||||||||||||||||||||| |||||||||||| Sbjct: 839 ggatatattctagatcttctttcttgactatatat 873
>gb|AY847077.1| Stipagrostis zeyheri ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1146 Score = 412 bits (208), Expect = e-112 Identities = 380/437 (86%), Gaps = 12/437 (2%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| |||||||||||||| |||||||||| ||| ||| Sbjct: 235 agcaaaactaaagggatgtggataaaaggagggatgatagatagaaggaagaagaa-taa 293 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 | ||||||| |||||| | |||||||||||||||||||||||||||||||||||||| Sbjct: 294 gaaggatataggattccaatatgtatggtctatgaattacatcataaaaggcaatgtgat 353 Query: 122 aaagcatcaatataata--------aaactaatagagaatgaaaaattgtaacttgaaag 173 ||||||||||||||||| ||| ||| | ||||| ||||| |||||||||| Sbjct: 354 aaagcatcaatataataaaatattaaaaataagaaagaattcaaaatcataacttgaaac 413 Query: 174 aagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaat 233 || || || |||||| ||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 414 aaaaaataaaaatttaaagcaataataaagagcagctcgggttaataaaactgagaaaat 473 Query: 234 taactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaagg 293 | |||||||||||||||||||||||||||| |||| ||||||| ||||||||||| |||| Sbjct: 474 tgactcggaaagaaattttttggaagctccattgcaggattcaaacctaaccattaaagg 533 Query: 294 agaagcagtgggaacgacagaacctatgattccatagga--ttttattgaaaagaatcct 351 |||||| |||||||||||| ||||||||| | ||||||| |||| |||||||||||||| Sbjct: 534 agaagctgtgggaacgacaaaacctatgactgcataggatttttttttgaaaagaatcct 593 Query: 352 aacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagttt 411 || |||||||||||||||||||||||||||||| ||| ||||||||| || || Sbjct: 594 aatacttcattgggtgggatggcggaacaaaccaaaaaaattgctttatttggt-agatt 652 Query: 412 ataaattaacaaataag 428 ||||||||||||||||| Sbjct: 653 ataaattaacaaataag 669 Score = 69.9 bits (35), Expect = 9e-09 Identities = 41/43 (95%) Strand = Plus / Plus Query: 463 tattgaattagaatactttaccgcgattcaataagagtaaaaa 505 ||||| |||||||||||||||| |||||||||||||||||||| Sbjct: 670 tattggattagaatactttaccacgattcaataagagtaaaaa 712
>gb|AF133486.1|AF133486 Molinia caerulea ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1211 Score = 406 bits (205), Expect = e-110 Identities = 291/322 (90%) Strand = Plus / Plus Query: 187 tttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaaga 246 ||||||||||||||| |||| || ||||||||||||||||||||||| ||||||||||| Sbjct: 458 tttaagcaataataaggagcaaccggggttaataaaactgagaaaattgactcggaaaga 517 Query: 247 aattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtggga 306 ||||||||||||||||| |||| | ||||| ||||||||||| |||||||||| |||||| Sbjct: 518 aattttttggaagctccattgcagaattcaaacctaaccattaaaggagaagctgtggga 577 Query: 307 acgacagaacctatgattccataggattttattgaaaagaatcctaacacttcattgggt 366 |||||| ||||||||| | |||||||||||||||||||||||||||| |||||||||||| Sbjct: 578 acgacaaaacctatgactgcataggattttattgaaaagaatcctaatacttcattgggt 637 Query: 367 gggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaata 426 |||||||||||||||||| ||| |||||||||||| ||||||||||||||||| Sbjct: 638 gggatggcggaacaaaccaaaaaaattgctttatttggtaaggttataaattaacaaata 697 Query: 427 agacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgc 486 ||||||||||||||||||||||||||||||||| |||||| |||| |||||||||| | Sbjct: 698 agacaggaaagagtaaatattcgcccgcgaaatctttattggattaagatactttaccac 757 Query: 487 gattcaataagagtaaaaataa 508 |||||||||||||||||||||| Sbjct: 758 gattcaataagagtaaaaataa 779 Score = 198 bits (100), Expect = 2e-47 Identities = 131/140 (93%), Gaps = 1/140 (0%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| |||||||||||||| |||||||||| ||| ||| Sbjct: 262 agcaaaactaaagggatgtggataaaaggagggatgatagatagaaggaagaagaa-taa 320 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 321 gaaagatataggattccaatgtgtatggtctatgaattacatcataaaaggcaatgtgat 380 Query: 122 aaagcatcaatataataaaa 141 |||||||||||||||||||| Sbjct: 381 aaagcatcaatataataaaa 400 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 580 atatattctagatcttcttttttgactatatat 612 |||||||||||||||||||| |||||||||||| Sbjct: 834 atatattctagatcttctttcttgactatatat 866
>gb|AY847104.1| Zeugites sylvaticus ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1051 Score = 404 bits (204), Expect = e-109 Identities = 343/389 (88%), Gaps = 9/389 (2%) Strand = Plus / Plus Query: 4 caaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataaat 63 |||||||||||||||||||||||| ||||||||||||| |||||||| | ||| ||| Sbjct: 210 caaaactaaagggatgtggataaaaggagggatgataggtagaaggaaaaagaa-taaga 268 Query: 64 aagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaaaa 123 ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| || Sbjct: 269 aagatataggattccaatgtgtatggtctatgaattacatcataaaaggcaatgtgataa 328 Query: 124 agcatcaat--------ataataaaactaatagagaatgaaaaattgtaacttgaaagaa 175 ||||||||| |||| |||| || ||||||| |||| ||||||||||| || Sbjct: 329 agcatcaatataataaaataagaaaaaaaagagagaattcgaaatcgtaacttgaaacaa 388 Query: 176 gaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaatta 235 || || ||||| ||||||||| ||||||| ||||||||||||||||||||||||||| Sbjct: 389 taaataaaaattgcaagcaataaaaaagagcagcccgggttaataaaactgagaaaattg 448 Query: 236 actcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggag 295 |||||||||||||||||||||||||||| |||| ||||||| ||||||||||| |||||| Sbjct: 449 actcggaaagaaattttttggaagctccattgcaggattcaaacctaaccattaaaggag 508 Query: 296 aagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaaca 355 |||| |||||||||||| ||||||||| | ||||||||||||||||||||||||||| | Sbjct: 509 aagctgtgggaacgacaaaacctatgactggataggattttattgaaaagaatcctaata 568 Query: 356 cttcattgggtgggatggcggaacaaacc 384 ||||||||||||||||||||||||||||| Sbjct: 569 cttcattgggtgggatggcggaacaaacc 597 Score = 107 bits (54), Expect = 4e-20 Identities = 72/78 (92%) Strand = Plus / Plus Query: 397 ttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgcccgcga 456 |||||||||||| |||||||||| ||||||||||||||||||||||| |||||||||| | Sbjct: 609 ttatttggtaaggttataaattaccaaataagacaggaaagagtaaacattcgcccgcta 668 Query: 457 aattcttattgaattaga 474 |||| |||||| |||||| Sbjct: 669 aatttttattggattaga 686
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 402 bits (203), Expect = e-109 Identities = 300/332 (90%), Gaps = 2/332 (0%) Strand = Plus / Minus Query: 181 acaaattttaagcaataa-taaagagccgcccgggttaataaaactgagaaaattaactc 239 |||||| | ||||||||| |||||||| ||| ||||||||||||||||||||||| |||| Sbjct: 1650 acaaatataaagcaataaataaagagcagcc-gggttaataaaactgagaaaattgactc 1592 Query: 240 ggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagc 299 |||||||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||| Sbjct: 1591 ggaaagaaattttttggaagctccattgcaggattcaaacctaaccattaaaggagaagc 1532 Query: 300 agtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttc 359 |||||||||||| ||||||||| | ||||||||||||||| |||||||||||||||||| Sbjct: 1531 tgtgggaacgacaaaacctatgactacataggattttattggaaagaatcctaacacttc 1472 Query: 360 attgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaatta 419 ||||||||||||||||||||||||| ||| ||||||| |||| || ||||||| Sbjct: 1471 attgggtgggatggcggaacaaaccaaaaaaattgctttatttgataaggttctaaatta 1412 Query: 420 acaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaatact 479 |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 1411 acaaataagacaggaaagagtaaatattcgcccgcgaaatccttattggattagaatact 1352 Query: 480 ttaccgcgattcaataagagtaaaaataagga 511 ||||| ||||||||||||| |||||| ||||| Sbjct: 1351 ttaccacgattcaataagaataaaaaaaagga 1320 Score = 149 bits (75), Expect = 1e-32 Identities = 128/144 (88%), Gaps = 5/144 (3%) Strand = Plus / Minus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 ||||||||||||||||| |||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 1846 agcaaaactaaagggatctggataaaaggagggatgatagatagaaggaagaag-aataa 1788 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcat----aaaaggcaatg 117 ||||||||| ||||| |||||||||| ||||||||||||||| ||||||||||| Sbjct: 1787 gaaagatataggattcccatgtgtatggtttatgaattacatcataaaaaaaaggcaatg 1728 Query: 118 tgaaaaagcatcaatataataaaa 141 ||| |||||||||||||||||||| Sbjct: 1727 tgataaagcatcaatataataaaa 1704 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 579 gatatattctagatcttcttttttgactatatat 612 ||||||||||||||||||||| |||||||||||| Sbjct: 1273 gatatattctagatcttctttcttgactatatat 1240
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 402 bits (203), Expect = e-109 Identities = 300/332 (90%), Gaps = 2/332 (0%) Strand = Plus / Minus Query: 181 acaaattttaagcaataa-taaagagccgcccgggttaataaaactgagaaaattaactc 239 |||||| | ||||||||| |||||||| ||| ||||||||||||||||||||||| |||| Sbjct: 81207 acaaatataaagcaataaataaagagcagcc-gggttaataaaactgagaaaattgactc 81149 Query: 240 ggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagc 299 |||||||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||| Sbjct: 81148 ggaaagaaattttttggaagctccattgcaggattcaaacctaaccattaaaggagaagc 81089 Query: 300 agtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttc 359 |||||||||||| ||||||||| | ||||||||||||||| |||||||||||||||||| Sbjct: 81088 tgtgggaacgacaaaacctatgactacataggattttattggaaagaatcctaacacttc 81029 Query: 360 attgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaatta 419 ||||||||||||||||||||||||| ||| ||||||| |||| || ||||||| Sbjct: 81028 attgggtgggatggcggaacaaaccaaaaaaattgctttatttgataaggttctaaatta 80969 Query: 420 acaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaatact 479 |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 80968 acaaataagacaggaaagagtaaatattcgcccgcgaaatccttattggattagaatact 80909 Query: 480 ttaccgcgattcaataagagtaaaaataagga 511 ||||| ||||||||||||| |||||| ||||| Sbjct: 80908 ttaccacgattcaataagaataaaaaaaagga 80877 Score = 149 bits (75), Expect = 1e-32 Identities = 128/144 (88%), Gaps = 5/144 (3%) Strand = Plus / Minus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 ||||||||||||||||| |||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 81403 agcaaaactaaagggatctggataaaaggagggatgatagatagaaggaagaag-aataa 81345 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcat----aaaaggcaatg 117 ||||||||| ||||| |||||||||| ||||||||||||||| ||||||||||| Sbjct: 81344 gaaagatataggattcccatgtgtatggtttatgaattacatcataaaaaaaaggcaatg 81285 Query: 118 tgaaaaagcatcaatataataaaa 141 ||| |||||||||||||||||||| Sbjct: 81284 tgataaagcatcaatataataaaa 81261 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 579 gatatattctagatcttcttttttgactatatat 612 ||||||||||||||||||||| |||||||||||| Sbjct: 80830 gatatattctagatcttctttcttgactatatat 80797
>gb|AF133459.1|AF133459 Ehrharta calycina ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1192 Score = 398 bits (201), Expect = e-108 Identities = 299/334 (89%) Strand = Plus / Plus Query: 167 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 226 |||||| ||||| ||||||||||||||||||||||||||| | ||||||||||||||||| Sbjct: 413 ttgaaacaagaaatacaaattttaagcaataataaagagcggtccgggttaataaaactg 472 Query: 227 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 286 | | |||| |||||||||||||||||||| ||||||| ||||| ||| | |||||| || Sbjct: 473 atagaattgactcggaaagaaattttttgaaagctccattgcgaaatttaaacctaatca 532 Query: 287 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 346 || | |||||||| |||||||||||||||| |||| | ||||||||||||||||||||| Sbjct: 533 ttaagggagaagctgtgggaacgacagaactcatgactgcataggattttattgaaaaga 592 Query: 347 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 406 ||||||| |||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 593 atcctaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgata 652 Query: 407 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 466 || |||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 653 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatccttatt 712 Query: 467 gaattagaatactttaccgcgattcaataagagt 500 ||||||||||||||||||| ||||||||| |||| Sbjct: 713 gaattagaatactttaccgtgattcaataggagt 746 Score = 121 bits (61), Expect = 3e-24 Identities = 119/137 (86%), Gaps = 6/137 (4%) Strand = Plus / Plus Query: 5 aaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataaata 64 ||||| ||||||||||||||||| |||| |||||||||||||||||||| |||||| | Sbjct: 251 aaaacaaaagggatgtggataaaaggagagatgatagaaagaaggaaga-taaataagaa 309 Query: 65 agatatagaattccactgtgtatggtctatgaattacat-----cataaaaggcaatgtg 119 |||||||| |||||| | |||||||||||||||||| || ||||||||||||||| Sbjct: 310 agatataggattccaatatgtatggtctatgaattaaataataaaataaaaggcaatgtg 369 Query: 120 aaaaagcatcaatataa 136 | ||||||||||||||| Sbjct: 370 ataaagcatcaatataa 386 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 542 taaatatagaatttagataaatatccacacacatctggatatattcta 589 |||||||||||| |||||||||| | ||||||||| ||||||||||| Sbjct: 789 taaatatagaatatagataaataaacgcacacatctagatatattcta 836
>gb|AY847098.1| Chasmanthium latifolium ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1132 Score = 396 bits (200), Expect = e-107 Identities = 408/475 (85%), Gaps = 6/475 (1%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 ||||| |||||||||||| | ||||| |||||||||| ||| |||||||||| ||| | Sbjct: 209 agcaacactaaagggatgggcataaaaggagggatgagagatagaaggaagaagaagaag 268 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 | ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 269 a-aagatataggattccaatgtgtatggtctatgaattacatcataaaaggcaatgtgat 327 Query: 122 aaagcatcaatataataaaactaatagaga--atgaaaaattgtaacttgaaagaagaac 179 |||||||||||||||||||| || ||||| || |||||||||||||||| || || Sbjct: 328 aaagcatcaatataataaaaaaaaaagagagaattcgaaattgtaacttgaaacaataaa 387 Query: 180 tacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactc 239 || ||||| ||||||||| ||||||| ||| ||||||||||||||||||||||| |||| Sbjct: 388 taaaaattgaaagcaataaaaaagagcagcctgggttaataaaactgagaaaattgactc 447 Query: 240 ggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagc 299 |||||||||||||||||||||||| |||| ||||||| |||||||||| |||||||||| Sbjct: 448 ggaaagaaattttttggaagctccattgcaggattcaaacctaaccatgaaaggagaagc 507 Query: 300 agtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttc 359 |||||||||| | ||||||||| | |||||||||||||||||||||||||||| ||||| Sbjct: 508 tgtgggaacgagaaaacctatgactgcataggattttattgaaaagaatcctaatacttc 567 Query: 360 attgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaatta 419 |||||||||||||||||| | | || ||| |||||||||||| |||| |||| Sbjct: 568 attgggtgggatggcggacctagccaaaaaaattgctttatttggtaaggttatcaatt- 626 Query: 420 acaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattaga 474 |||| | ||| || | ||||||||||||||||||||||| |||||| |||||| Sbjct: 627 acaa--aggactggcatgagtaaatattcgcccgcgaaatctttattggattaga 679 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 577 tggatatattctagatcttcttttttgactat 608 ||||||||||||||||||||||| |||||||| Sbjct: 754 tggatatattctagatcttctttcttgactat 785
>gb|AY847082.1| Andropogon gerardii ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1186 Score = 392 bits (198), Expect = e-106 Identities = 316/355 (89%), Gaps = 2/355 (0%) Strand = Plus / Plus Query: 157 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 216 |||| ||||||||||| || || || |||| | ||||||||| ||||||| ||| | ||| Sbjct: 402 aaatcgtaacttgaaacaacaaatataaatataaagcaataaaaaagagcagcc-gagtt 460 Query: 217 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 276 |||||||||||||||||| |||||||||||||||||||||||||||| |||| ||||||| Sbjct: 461 aataaaactgagaaaattgactcggaaagaaattttttggaagctccattgcaggattca 520 Query: 277 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 336 ||||||||||| |||||||||| |||||||||||| ||||||||| | ||||||||||| Sbjct: 521 aacctaaccattaaaggagaagctgtgggaacgacaaaacctatgactacataggatttt 580 Query: 337 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtc 396 |||| ||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 581 attggaaagaatcctaacacttcattgggtgggatggcggaacaaaccaaaaaaattgct 640 Query: 397 ttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgcccgcga 456 ||||||| |||| || |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 641 ttatttgataaggttctaaattaacaaataagacaggaaagagtaaatattcgcccgcga 700 Query: 457 aattcttattgaattagaatactttaccgcgattcaataagagtaaaaataagga 511 ||| ||||||| |||||||||||||| | ||||||||||||| |||||| ||||| Sbjct: 701 aatccttattggattagaatacttta-cacgattcaataagaataaaaaaaagga 754 Score = 121 bits (61), Expect = 3e-24 Identities = 123/142 (86%), Gaps = 5/142 (3%) Strand = Plus / Plus Query: 4 caaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataaat 63 |||||||||||||||||||||||| ||||||||||| | | |||||||| ||| || | Sbjct: 237 caaaactaaagggatgtggataaaaggagggatgatttataaaaggaagaagaattaga- 295 Query: 64 aagatatagaattccactgtgtatggtctatgaattacatcataaaa----ggcaatgtg 119 ||||||||| ||||| |||||||||||||||||||| ||||||||| |||||||| Sbjct: 296 aagatataggattccgatgtgtatggtctatgaattaaatcataaaaaaagggcaatgtt 355 Query: 120 aaaaagcatcaatataataaaa 141 | |||||||||||||||||||| Sbjct: 356 ataaagcatcaatataataaaa 377 Score = 63.9 bits (32), Expect = 6e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 577 tggatatattctagatcttcttttttgactatatat 612 ||||||||||||||||||||||| |||||||||||| Sbjct: 798 tggatatattctagatcttctttcttgactatatat 833
>ref|XM_481019.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2157 Score = 385 bits (194), Expect = e-103 Identities = 253/275 (92%) Strand = Plus / Plus Query: 230 aaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattc 289 ||||| |||||||||||||||||||||||||||| ||||| |||||| ||||||||||| Sbjct: 2 aaattgactcggaaagaaattttttggaagctccattgcgagattcaaacctaaccatta 61 Query: 290 aaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatc 349 ||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||| Sbjct: 62 aaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaagaatc 121 Query: 350 ctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagt 409 | || |||||||||||||||||||||||||||||| |||||||||||| |||| Sbjct: 122 ccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgataagg 181 Query: 410 ttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaa 469 |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 182 ttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttattgaa 241 Query: 470 ttagaatactttaccgcgattcaataagagtaaaa 504 ||||||||||||||||||||||||||||||||||| Sbjct: 242 ttagaatactttaccgcgattcaataagagtaaaa 276 Score = 85.7 bits (43), Expect = 2e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 542 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 601 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 310 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 369 Query: 602 tgactatatat 612 ||||||||||| Sbjct: 370 tgactatatat 380
>ref|XM_507181.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0036E18.24 mRNA Length = 2157 Score = 385 bits (194), Expect = e-103 Identities = 253/275 (92%) Strand = Plus / Plus Query: 230 aaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattc 289 ||||| |||||||||||||||||||||||||||| ||||| |||||| ||||||||||| Sbjct: 2 aaattgactcggaaagaaattttttggaagctccattgcgagattcaaacctaaccatta 61 Query: 290 aaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatc 349 ||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||| Sbjct: 62 aaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaagaatc 121 Query: 350 ctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagt 409 | || |||||||||||||||||||||||||||||| |||||||||||| |||| Sbjct: 122 ccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgataagg 181 Query: 410 ttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaa 469 |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 182 ttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttattgaa 241 Query: 470 ttagaatactttaccgcgattcaataagagtaaaa 504 ||||||||||||||||||||||||||||||||||| Sbjct: 242 ttagaatactttaccgcgattcaataagagtaaaa 276 Score = 85.7 bits (43), Expect = 2e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 542 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 601 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 310 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 369 Query: 602 tgactatatat 612 ||||||||||| Sbjct: 370 tgactatatat 380
>gb|AY847079.1| Merxmuellera rangei ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1166 Score = 385 bits (194), Expect = e-103 Identities = 293/327 (89%), Gaps = 1/327 (0%) Strand = Plus / Plus Query: 183 aaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcgga 242 |||||| || |||||||||||||| ||||||| ||||||||||||||||||| ||||||| Sbjct: 411 aaatttaaaccaataataaagagcagcccggggtaataaaactgagaaaattgactcgga 470 Query: 243 aagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagt 302 |||| |||||||||||||||| |||| ||||||| ||||||||||| |||||||||| || Sbjct: 471 aagatattttttggaagctccattgcaggattcaaacctaaccattaaaggagaagctgt 530 Query: 303 gggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttcatt 362 |||||||||| ||||||||| | ||||||||| |||||||||||||||||| |||||||| Sbjct: 531 gggaacgacaaaacctatgactacataggattgtattgaaaagaatcctaatacttcatt 590 Query: 363 gggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaaca 422 |||||||||||||||||||||| || |||||||||||| || ||||||| || Sbjct: 591 gggtgggatggcggaacaaaccaaaaaaattactttatttggtaagattctaaattacca 650 Query: 423 aataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaatacttta 482 ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 651 aataagacaggaaagagtaaatattcgcccgcg-aatctttattgaattagaatacttta 709 Query: 483 ccgcgattcaataagagtaaaaataag 509 || ||||||||||||||||||||||| Sbjct: 710 ccatgattcaataagagtaaaaataag 736 Score = 174 bits (88), Expect = 2e-40 Identities = 128/140 (91%), Gaps = 1/140 (0%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||| ||||||||||||| |||||||||||||| |||||||||| || ||| Sbjct: 234 agcaaaactaaaaggatgtggataaaaggagggatgatagatagaaggaagaataa-taa 292 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 293 gaaagatataggattccaatgtgtatggtttatgaattacatcataaaaggcaatgtgat 352 Query: 122 aaagcatcaatataataaaa 141 |||||||||||||||||||| Sbjct: 353 aaagcatcaatataataaaa 372 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 580 atatattctagatcttcttttttgactatatat 612 |||||||||||||||||||| || ||||||||| Sbjct: 788 atatattctagatcttctttctttactatatat 820
>ref|XM_479424.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2154 Score = 385 bits (194), Expect = e-103 Identities = 253/275 (92%) Strand = Plus / Plus Query: 230 aaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattc 289 ||||| |||||||||||||||||||||||||||| ||||| |||||| ||||||||||| Sbjct: 2 aaattgactcggaaagaaattttttggaagctccattgcgagattcaaacctaaccatta 61 Query: 290 aaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatc 349 ||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||| Sbjct: 62 aaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaagaatc 121 Query: 350 ctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagt 409 | || |||||||||||||||||||||||||||||| |||||||||||| |||| Sbjct: 122 ccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgataagg 181 Query: 410 ttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaa 469 |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 182 ttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttattgaa 241 Query: 470 ttagaatactttaccgcgattcaataagagtaaaa 504 ||||||||||||||||||||||||||||||||||| Sbjct: 242 ttagaatactttaccgcgattcaataagagtaaaa 276 Score = 85.7 bits (43), Expect = 2e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 542 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 601 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 309 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 368 Query: 602 tgactatatat 612 ||||||||||| Sbjct: 369 tgactatatat 379
>ref|XM_479423.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2154 Score = 385 bits (194), Expect = e-103 Identities = 253/275 (92%) Strand = Plus / Plus Query: 230 aaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattc 289 ||||| |||||||||||||||||||||||||||| ||||| |||||| ||||||||||| Sbjct: 2 aaattgactcggaaagaaattttttggaagctccattgcgagattcaaacctaaccatta 61 Query: 290 aaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatc 349 ||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||| Sbjct: 62 aaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaagaatc 121 Query: 350 ctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagt 409 | || |||||||||||||||||||||||||||||| |||||||||||| |||| Sbjct: 122 ccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgataagg 181 Query: 410 ttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaa 469 |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 182 ttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttattgaa 241 Query: 470 ttagaatactttaccgcgattcaataagagtaaaa 504 ||||||||||||||||||||||||||||||||||| Sbjct: 242 ttagaatactttaccgcgattcaataagagtaaaa 276 Score = 85.7 bits (43), Expect = 2e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 542 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 601 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 309 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 368 Query: 602 tgactatatat 612 ||||||||||| Sbjct: 369 tgactatatat 379
>dbj|AK105308.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-117-B12, full insert sequence Length = 2166 Score = 385 bits (194), Expect = e-103 Identities = 253/275 (92%) Strand = Plus / Plus Query: 230 aaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattc 289 ||||| |||||||||||||||||||||||||||| ||||| |||||| ||||||||||| Sbjct: 2 aaattgactcggaaagaaattttttggaagctccattgcgagattcaaacctaaccatta 61 Query: 290 aaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatc 349 ||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||| Sbjct: 62 aaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaagaatc 121 Query: 350 ctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagt 409 | || |||||||||||||||||||||||||||||| |||||||||||| |||| Sbjct: 122 ccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgataagg 181 Query: 410 ttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaa 469 |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 182 ttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttattgaa 241 Query: 470 ttagaatactttaccgcgattcaataagagtaaaa 504 ||||||||||||||||||||||||||||||||||| Sbjct: 242 ttagaatactttaccgcgattcaataagagtaaaa 276 Score = 85.7 bits (43), Expect = 2e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 542 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 601 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 319 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 378 Query: 602 tgactatatat 612 ||||||||||| Sbjct: 379 tgactatatat 389
>gb|AY847087.1| Danthoniopsis petiolata ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1147 Score = 383 bits (193), Expect = e-103 Identities = 289/322 (89%), Gaps = 1/322 (0%) Strand = Plus / Plus Query: 190 aagcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaat 249 ||||||||| ||||||| |||| |||| ||||||||||||||||| |||||||||||||| Sbjct: 412 aagcaataaaaaagagcagccccggttgataaaactgagaaaattgactcggaaagaaat 471 Query: 250 tttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacg 309 |||||||||||||| |||| ||||||| ||||||||||| || ||||||| ||||||||| Sbjct: 472 tttttggaagctccattgcaggattcaaacctaaccattaaaagagaagctgtgggaacg 531 Query: 310 acagaacctatgattccataggattttattgaaaagaatcctaacacttcattgggtggg 369 ||| ||||||||| | |||||||||||| | ||||||||||||| ||||||||||||||| Sbjct: 532 acaaaacctatgactgcataggattttagtaaaaagaatcctaatacttcattgggtggg 591 Query: 370 atggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaataaga 429 ||||||||||||||| ||| |||||||||||| |||||||||||||||||||| Sbjct: 592 atggcggaacaaaccaaaaaaattgctttatttggtaaggttataaattaacaaataaga 651 Query: 430 caggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgat 489 |||||||||||||||||||||||||||||| |||||| |||||||||||||| | |||| Sbjct: 652 caggaaagagtaaatattcgcccgcgaaatctttattggattagaatacttta-cacgat 710 Query: 490 tcaataagagtaaaaataagga 511 ||||||||| |||||||||||| Sbjct: 711 tcaataagaataaaaataagga 732 Score = 151 bits (76), Expect = 3e-33 Identities = 127/140 (90%), Gaps = 3/140 (2%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 agcaaaactaaagggatgtggataaaaggagggatgatagatagaaggaagaag-aataa 290 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| ||||||||||||| |||| || |||| ||||||||||||| Sbjct: 291 gaaagatataggattccaatgtgtatggtctaggaataac-tcat-aaaggcaatgtgat 348 Query: 122 aaagcatcaatataataaaa 141 |||||||||||||||||||| Sbjct: 349 aaagcatcaatataataaaa 368 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 580 atatattctagatcttcttttttgactatatat 612 |||||||||||||||||||| |||||||||||| Sbjct: 777 atatattctagatcttctttcttgactatatat 809
>gb|AY847106.1| Zeugites capillaris ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1062 Score = 381 bits (192), Expect = e-102 Identities = 340/389 (87%), Gaps = 9/389 (2%) Strand = Plus / Plus Query: 4 caaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataaat 63 |||||||||||||||||||||||| ||||||||||||| |||||||| | ||| ||| Sbjct: 236 caaaactaaagggatgtggataaaaggagggatgataggtagaaggaaaaagaa-taaga 294 Query: 64 aagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaaaa 123 ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| || Sbjct: 295 aagatataggattccaatgtgtatggtctatgaattacatcataaaaggcaatgtgataa 354 Query: 124 agcatcaat--------ataataaaactaatagagaatgaaaaattgtaacttgaaagaa 175 ||||||||| |||| |||| || ||||||| |||| || |||||||| || Sbjct: 355 agcatcaatataataaaataagaaaaaaaagagagaattcgaaatcgtcacttgaaacaa 414 Query: 176 gaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaatta 235 || || ||||| ||||||||| ||||||| ||||||||||||||||||||||||||| Sbjct: 415 taaataaaaattgcaagcaataaaaaagagcagcccgggttaataaaactgagaaaattg 474 Query: 236 actcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggag 295 |||||||||||||||||||||||||||| |||| ||||||| |||||||||| |||||| Sbjct: 475 actcggaaagaaattttttggaagctccattgcaggattcaagcctaaccattaaaggag 534 Query: 296 aagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaaca 355 |||| |||||||||||| ||||||||| | |||||||||||||||||| |||||||| | Sbjct: 535 aagctgtgggaacgacaaaacctatgactggataggattttattgaaaaaaatcctaata 594 Query: 356 cttcattgggtgggatggcggaacaaacc 384 ||||||||||||||||||||||||||||| Sbjct: 595 cttcattgggtgggatggcggaacaaacc 623 Score = 101 bits (51), Expect = 3e-18 Identities = 60/63 (95%) Strand = Plus / Plus Query: 397 ttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgcccgcga 456 |||||||||||| |||||||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 634 ttatttggtaaggttataaattaccaaataagacaggaaagagtaaacattcgcccgcga 693 Query: 457 aat 459 ||| Sbjct: 694 aat 696
>gb|AY847114.1| Spartochloa scirpoidea ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1176 Score = 377 bits (190), Expect = e-101 Identities = 309/350 (88%), Gaps = 2/350 (0%) Strand = Plus / Plus Query: 162 gtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataa 221 ||||||| ||| || || || |||||| ||||||||| ||||||| ||| |||||||||| Sbjct: 407 gtaacttcaaacaataaataaaaatttaaagcaataaaaaagagcagccggggttaataa 466 Query: 222 aactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacct 281 ||||||||||||| ||||||||| ||||||| |||||||| |||| ||||||| |||| Sbjct: 467 aactgagaaaattgactcggaaatccattttttagaagctccattgcaggattcaaacct 526 Query: 282 aaccattcaaggagaagcagtgggaacgacagaacctatgattccataggattttattga 341 ||||||| |||||||||| |||||||||||| ||||||||| | ||||||||||| |||| Sbjct: 527 aaccattaaaggagaagctgtgggaacgacaaaacctatgactgcataggattttcttga 586 Query: 342 aaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatt 401 |||||||||||| |||||||||||||||||||||||||||||| ||| ||||| Sbjct: 587 aaagaatcctaatacttcattgggtgggatggcggaacaaaccaaaaaaattgctttatt 646 Query: 402 tggtaagtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattc 461 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 647 tggtaaggttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaaccc 706 Query: 462 ttattgaattagaatactttaccgcgattcaataagagtaaaaataagga 511 |||||| ||||||||||||| | ||||||||||||| |||||||||||| Sbjct: 707 ttattggattagaatacttt--cacgattcaataagaataaaaataagga 754 Score = 172 bits (87), Expect = 9e-40 Identities = 121/131 (92%), Gaps = 1/131 (0%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| |||||||||||||| |||||||||| ||| ||| Sbjct: 239 agcaaaactaaagggatgtggataaaaggagggatgatagatagaaggaagaagaa-taa 297 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| ||||||||| |||||||||||||||||||||||||||||| Sbjct: 298 gaaagatataggattccaatgtgtatgggctatgaattacatcataaaaggcaatgtgat 357 Query: 122 aaagcatcaat 132 ||||||||||| Sbjct: 358 aaagcatcaat 368 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 577 tggatatattctagatcttcttttttgactat 608 ||||||||||||||||||||||| |||||||| Sbjct: 796 tggatatattctagatcttctttcttgactat 827
>gb|AY847112.1| Cyperochloa hirsuta ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 931 Score = 377 bits (190), Expect = e-101 Identities = 313/355 (88%), Gaps = 1/355 (0%) Strand = Plus / Plus Query: 157 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 216 |||| ||||||| ||| || || || |||||| |||||| || ||||||| ||| ||||| Sbjct: 156 aaatcgtaacttcaaacaataaataaaaatttaaagcaacaaaaaagagcagccggggtt 215 Query: 217 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 276 |||||||||||||||||| ||||||||| |||||||||||||||||| |||| ||||||| Sbjct: 216 aataaaactgagaaaattgactcggaaataaattttttggaagctccattgcaggattca 275 Query: 277 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 336 ||||||||||| |||||||||| |||||||||||| ||||||||| | ||||||||||| Sbjct: 276 aacctaaccattaaaggagaagctgtgggaacgacaaaacctatgactgcataggatttt 335 Query: 337 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtc 396 |||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct: 336 cttgaaaagaatcctaatacttcattgggtgggatggcggaacaaaccaaaaaaatggct 395 Query: 397 ttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgcccgcga 456 |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 396 ttatttggtaaggttataaattaacaaataaaacaggaaagagtaaatattcgcccgcga 455 Query: 457 aattcttattgaattagaatactttaccgcgattcaataagagtaaaaataagga 511 ||| |||||| |||| ||||||||| | ||||||||||||| |||||||||||| Sbjct: 456 aatctttattggattaaaatacttta-cacgattcaataagaataaaaataagga 509 Score = 157 bits (79), Expect = 5e-35 Identities = 116/127 (91%), Gaps = 1/127 (0%) Strand = Plus / Plus Query: 11 aaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataaataagatat 70 ||||||||||||||||| |||||||||||||| ||||||||| | | ||| ||||||| Sbjct: 2 aaagggatgtggataaaaggagggatgatagattgaaggaagaagga-taagaaagatat 60 Query: 71 agaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaaaaagcatca 130 || |||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 61 aggattccaatgtgtatggtctatgaattacatcataaaaggcaatgtgataaagcatca 120 Query: 131 atataat 137 ||||||| Sbjct: 121 atataat 127 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Plus Query: 577 tggatatattctagatcttcttttttgactat 608 ||||||||||||| ||||||||| |||||||| Sbjct: 552 tggatatattctaaatcttctttcttgactat 583
>gb|AY912197.1| Neurolepis nana ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1230 Score = 377 bits (190), Expect = e-101 Identities = 264/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Plus Query: 174 aagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaat 233 ||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 436 aagaaatacaaatttgaagcaataataaagagcggcccgggttaataaaactgagaaaat 495 Query: 234 taactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaagg 293 | |||||||||||||||||||||||||||| ||| || ||||||||||||||||| |||| Sbjct: 496 tgactcggaaagaaattttttggaagctccattgtggaattcagacctaaccattaaagg 555 Query: 294 agaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaa 353 ||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||| Sbjct: 556 agaagtagtgggaacgacagaacctatgactgcataggattttattgaaaagaatcctaa 615 Query: 354 cacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt--- 410 |||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 616 tacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttat 675 Query: 411 --tataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 459 |||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 676 aatataaattaacaaataagacagaaaagagtaaatattcgcccgcgaaat 726 Score = 198 bits (100), Expect = 2e-47 Identities = 140/152 (92%), Gaps = 1/152 (0%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||| Sbjct: 276 agcaaaactaaagggatgtggataaaaggagggatgatagaaagaaagaagaggaa-taa 334 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| | |||||||||||||| ||||||||||||||||||||||| Sbjct: 335 gaaagatataggattccaatatgtatggtctatgagttacatcataaaaggcaatgtgat 394 Query: 122 aaagcatcaatataataaaactaatagagaat 153 |||||||||||||||||||| ||| ||||||| Sbjct: 395 aaagcatcaatataataaaaataacagagaat 426 Score = 113 bits (57), Expect = 7e-22 Identities = 112/129 (86%), Gaps = 6/129 (4%) Strand = Plus / Plus Query: 487 gattcaataagagtaaaaataaggatatttttt---agaaggactacattattatctata 543 ||||||||||||||||||||||||| ||||||| |||| || |||||||| ||||| Sbjct: 731 gattcaataagagtaaaaataaggagatttttttttagaaagattacattat---ctata 787 Query: 544 aatatagaatttagataaatatccacacacatctggatatattctagatcttcttttttg 603 |||||| ||| ||||||||| ||||| ||||| ||||||||||||||||||||| ||| Sbjct: 788 aatatataatacagataaatagacacacgcatctagatatattctagatcttctttcttg 847 Query: 604 actatatat 612 ||||||||| Sbjct: 848 actatatat 856
>gb|AY912194.1| Chusquea bambusoides ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1174 Score = 377 bits (190), Expect = e-101 Identities = 264/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Plus Query: 174 aagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaat 233 ||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 397 aagaaatacaaatttgaagcaataataaagagcggcccgggttaataaaactgagaaaat 456 Query: 234 taactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaagg 293 | |||||||||||||||||||| ||||||| ||| |||||||||||||||||||| |||| Sbjct: 457 tgactcggaaagaaattttttgtaagctccattgtgggattcagacctaaccattaaagg 516 Query: 294 agaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaa 353 ||||| ||||||||||||||||||||||| | |||||||| ||||||||||||||||||| Sbjct: 517 agaagtagtgggaacgacagaacctatgactgcataggatcttattgaaaagaatcctaa 576 Query: 354 cacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt--- 410 |||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 577 tacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttat 636 Query: 411 --tataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 459 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 637 aatataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 687 Score = 198 bits (100), Expect = 2e-47 Identities = 140/152 (92%), Gaps = 1/152 (0%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||| Sbjct: 237 agcaaaactaaagggatgtggataaaaggagggatgatagaaagaaagaagaggaa-taa 295 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| | |||||||||||||| ||||||||||||||||||||||| Sbjct: 296 gaaagatataggattccaatatgtatggtctatgagttacatcataaaaggcaatgtgat 355 Query: 122 aaagcatcaatataataaaactaatagagaat 153 |||||||||||||||||||| ||| ||||||| Sbjct: 356 aaagcatcaatataataaaaataacagagaat 387 Score = 85.7 bits (43), Expect = 2e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 542 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 601 |||||||| ||| ||||||||| ||||||||||| ||||||||||||||||||||| | Sbjct: 744 taaatatataatacagataaatagacacacacatctagatatattctagatcttctttct 803 Query: 602 tgactatatat 612 ||||||||||| Sbjct: 804 tgactatatat 814 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 487 gattcaataagagtaaaaataaggatatttttt 519 |||||||||||||||||||||||||||| |||| Sbjct: 692 gattcaataagagtaaaaataaggatatatttt 724
>gb|U62786.1|COU62786 Chusquea oxylepis ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1032 Score = 377 bits (190), Expect = e-101 Identities = 264/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Plus Query: 174 aagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaat 233 ||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 406 aagaaatacaaatttgaagcaataataaagagcggcccgggttaataaaactgagaaaat 465 Query: 234 taactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaagg 293 | |||||||||||||||||||| ||||||| ||| |||||||||||||||||||| |||| Sbjct: 466 tgactcggaaagaaattttttgtaagctccattgtgggattcagacctaaccattaaagg 525 Query: 294 agaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaa 353 ||||| ||||||||||||||||||||||| | |||||||| ||||||||||||||||||| Sbjct: 526 agaagtagtgggaacgacagaacctatgactgcataggatcttattgaaaagaatcctaa 585 Query: 354 cacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt--- 410 |||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 586 tacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttat 645 Query: 411 --tataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 459 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 646 aatataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 696 Score = 198 bits (100), Expect = 2e-47 Identities = 140/152 (92%), Gaps = 1/152 (0%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||| Sbjct: 246 agcaaaactaaagggatgtggataaaaggagggatgatagaaagaaagaagaggaa-taa 304 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| | |||||||||||||| ||||||||||||||||||||||| Sbjct: 305 gaaagatatagtattccaatatgtatggtctatgagttacatcataaaaggcaatgtgat 364 Query: 122 aaagcatcaatataataaaactaatagagaat 153 |||||||||||||||||||| ||| ||||||| Sbjct: 365 aaagcatcaatataataaaaataacagagaat 396 Score = 85.7 bits (43), Expect = 2e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 542 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 601 |||||||| ||| ||||||||| ||||||||||| ||||||||||||||||||||| | Sbjct: 753 taaatatataatacagataaatagacacacacatctagatatattctagatcttctttct 812 Query: 602 tgactatatat 612 ||||||||||| Sbjct: 813 tgactatatat 823 Score = 65.9 bits (33), Expect = 1e-07 Identities = 33/33 (100%) Strand = Plus / Plus Query: 487 gattcaataagagtaaaaataaggatatttttt 519 ||||||||||||||||||||||||||||||||| Sbjct: 701 gattcaataagagtaaaaataaggatatttttt 733
>gb|U62780.1|CAU62780 Chusquea aff. fendleri ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1031 Score = 377 bits (190), Expect = e-101 Identities = 264/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Plus Query: 174 aagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaat 233 ||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 404 aagaaatacaaatttgaagcaataataaagagcggcccgggttaataaaactgagaaaat 463 Query: 234 taactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaagg 293 | |||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||| Sbjct: 464 ttactcggaaagaaattttttggaagctccattgtgggattcagacctaaccattaaagg 523 Query: 294 agaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaa 353 ||||| ||||||||||||||||||||||| | ||||||||||| |||||||||||||||| Sbjct: 524 agaagtagtgggaacgacagaacctatgactgcataggatttttttgaaaagaatcctaa 583 Query: 354 cacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt--- 410 |||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 584 tacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttat 643 Query: 411 --tataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 459 ||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 644 aatataaattaacaaataagacaggaaagagtaaacattcgcccgcgaaat 694 Score = 190 bits (96), Expect = 4e-45 Identities = 139/152 (91%), Gaps = 1/152 (0%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| || |||||||||||||||| ||||||||| ||| Sbjct: 244 agcaaaactaaagggatgtggataaaaggggggatgatagaaagaaagaagaggaa-taa 302 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| | |||||||||||||| ||||||||||||||||||||||| Sbjct: 303 gaaagatataggattccaatatgtatggtctatgagttacatcataaaaggcaatgtgat 362 Query: 122 aaagcatcaatataataaaactaatagagaat 153 |||||||||||||||||||| ||| ||||||| Sbjct: 363 aaagcatcaatataataaaaataacagagaat 394 Score = 121 bits (61), Expect = 3e-24 Identities = 113/129 (87%), Gaps = 6/129 (4%) Strand = Plus / Plus Query: 487 gattcaataagagtaaaaataaggatatttttt---agaaggactacattattatctata 543 ||||||||||||||||||||||||||||||||| |||| || ||| |||||||||| Sbjct: 699 gattcaataagagtaaaaataaggatattttttttaagaaagattac---attatctata 755 Query: 544 aatatagaatttagataaatatccacacacatctggatatattctagatcttcttttttg 603 |||||| ||| |||||||| ||||||||||| ||||||||||||||||||||| ||| Sbjct: 756 aatatataatacggataaatagacacacacatctagatatattctagatcttctttcttg 815 Query: 604 actatatat 612 ||||||||| Sbjct: 816 actatatat 824
>gb|AY847093.1| Thysanolaena latifolia ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1182 Score = 373 bits (188), Expect = e-100 Identities = 319/364 (87%), Gaps = 2/364 (0%) Strand = Plus / Plus Query: 147 agagaatgaaaaattgtaacttgaaagaagaactacaaattttaagcaataataaagagc 206 ||||||| ||||| ||||||| ||| || || || ||||| ||||||||| ||||||| Sbjct: 394 agagaattcaaaatcgtaacttcaaacaataaataaaaattgaaagcaataaaaaagagc 453 Query: 207 cgcccgggttaataaaactgagaaaattaactcggaaagaaattttttggaagctccgtt 266 ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| || Sbjct: 454 agcccgggttaataaaactgagaaaattgactcggaaataaattttttggaagctccatt 513 Query: 267 gcgggattcagacctaaccattcaaggagaagcagtgggaacgacagaacctatgattcc 326 || ||||||| ||||||||||| |||||||||| |||||||||||| ||||||||| | | Sbjct: 514 gcaggattcaaacctaaccattaaaggagaagctgtgggaacgacaaaacctatgactgc 573 Query: 327 ataggattttattgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnn 386 ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 574 ataggattttattgaaaagaatcctaatacttcattggttgggatggcggaacaaaccaa 633 Query: 387 nnnnnttgtcttatttggtaagtttataaattaacaaataagacaggaaagagtaaatat 446 ||| |||||||||||| ||||||||||||||||| ||||||||||||||||| | Sbjct: 634 aaaaattgctttatttggtaaggttataaattaacaaatatgacaggaaagagtaaattt 693 Query: 447 tcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaaaaat 506 || |||||||||| |||||| |||| |||||||| | ||||||||||||| ||||||| Sbjct: 694 tcccccgcgaaatctttattggattataatacttt--cacgattcaataagaataaaaat 751 Query: 507 aagg 510 |||| Sbjct: 752 aagg 755 Score = 192 bits (97), Expect = 9e-46 Identities = 131/141 (92%), Gaps = 1/141 (0%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| |||||||||||||| |||||||||| ||| ||| Sbjct: 241 agcaaaactaaagggatgtggataaaaggagggatgatagatagaaggaagaagaa-taa 299 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 300 gaaagatataggattccaatgtgtatggtctatgaattacatcataaaaggcaatgtgat 359 Query: 122 aaagcatcaatataataaaac 142 |||||||||||||||| |||| Sbjct: 360 aaagcatcaatataattaaac 380 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 577 tggatatattctagatcttcttttttgactat 608 ||||||||||||||||||||||| |||||||| Sbjct: 804 tggatatattctagatcttctttcttgactat 835
>gb|AY912195.1| Chusquea culeou ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1181 Score = 369 bits (186), Expect = 7e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Plus Query: 174 aagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaat 233 ||||| || |||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 402 aagaaataaaaatttgaagcaataataaagagcggcccgggttaataaaactgagaaaat 461 Query: 234 taactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaagg 293 | |||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||| Sbjct: 462 ttactcggaaagaaattttttggaagctccattgtgggattcagacctaaccattaaagg 521 Query: 294 agaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaa 353 ||||| ||||||||||||||||||||||| | ||||||||||| |||||||||||||||| Sbjct: 522 agaagtagtgggaacgacagaacctatgactgcataggatttttttgaaaagaatcctaa 581 Query: 354 cacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt--- 410 |||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 582 tacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttat 641 Query: 411 --tataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 459 ||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 642 aatataaattaacaaataagacaggaaagagtaaacattcgcccgcgaaat 692 Score = 198 bits (100), Expect = 2e-47 Identities = 140/152 (92%), Gaps = 1/152 (0%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||| Sbjct: 242 agcaaaactaaagggatgtggataaaaggagggatgatagaaagaaagaagaggaa-taa 300 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| | |||||||||||||| ||||||||||||||||||||||| Sbjct: 301 gaaagatataggattccaatatgtatggtctatgagttacatcataaaaggcaatgtgat 360 Query: 122 aaagcatcaatataataaaactaatagagaat 153 |||||||||||||||||||| ||| ||||||| Sbjct: 361 aaagcatcaatataataaaaataacagagaat 392 Score = 117 bits (59), Expect = 4e-23 Identities = 113/130 (86%), Gaps = 7/130 (5%) Strand = Plus / Plus Query: 487 gattcaataagagtaaaaataaggatatttttt----agaaggactacattattatctat 542 ||||||||||||||||||||||||||||||||| |||| || |||||||| |||| Sbjct: 697 gattcaataagagtaaaaataaggatatttttttttaagaaagattacattat---ctat 753 Query: 543 aaatatagaatttagataaatatccacacacatctggatatattctagatcttctttttt 602 ||||||| ||| |||||||| ||||||||||| ||||||||||||||||||||| || Sbjct: 754 aaatatataatacggataaatagacacacacatctagatatattctagatcttctttctt 813 Query: 603 gactatatat 612 |||||||||| Sbjct: 814 gactatatat 823
>gb|AF133472.1|AF133472 Chusquea ramosissima ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1193 Score = 369 bits (186), Expect = 7e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Plus Query: 174 aagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaat 233 ||||| || |||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 428 aagaaataaaaatttgaagcaataataaagagcggcccgggttaataaaactgagaaaat 487 Query: 234 taactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaagg 293 | |||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||| Sbjct: 488 ttactcggaaagaaattttttggaagctccattgtgggattcagacctaaccattaaagg 547 Query: 294 agaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaa 353 ||||| ||||||||||||||||||||||| | ||||||||||| |||||||||||||||| Sbjct: 548 agaagtagtgggaacgacagaacctatgactgcataggatttttttgaaaagaatcctaa 607 Query: 354 cacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt--- 410 |||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 608 tacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttat 667 Query: 411 --tataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 459 ||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 668 aatataaattaacaaataagacaggaaagagtaaacattcgcccgcgaaat 718 Score = 198 bits (100), Expect = 2e-47 Identities = 140/152 (92%), Gaps = 1/152 (0%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||| Sbjct: 268 agcaaaactaaagggatgtggataaaaggagggatgatagaaagaaagaagaggaa-taa 326 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| | |||||||||||||| ||||||||||||||||||||||| Sbjct: 327 gaaagatataggattccaatatgtatggtctatgagttacatcataaaaggcaatgtgat 386 Query: 122 aaagcatcaatataataaaactaatagagaat 153 |||||||||||||||||||| ||| ||||||| Sbjct: 387 aaagcatcaatataataaaaataacagagaat 418 Score = 103 bits (52), Expect = 7e-19 Identities = 111/130 (85%), Gaps = 7/130 (5%) Strand = Plus / Plus Query: 487 gattcaataagagtaaaaataaggatatttttt----agaaggactacattattatctat 542 |||||||||||||||||| |||||| ||||||| |||| || |||||||| |||| Sbjct: 723 gattcaataagagtaaaantaaggagatttttttttaagaaagattacattat---ctat 779 Query: 543 aaatatagaatttagataaatatccacacacatctggatatattctagatcttctttttt 602 ||||||| ||| |||||||| ||||||||||| ||||||||||||||||||||| || Sbjct: 780 aaatatataatacggataaatagacacacacatctagatatattctagatcttctttctt 839 Query: 603 gactatatat 612 |||||||||| Sbjct: 840 gactatatat 849
>gb|U62793.1|NAU62793 Neurolepis aperta ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1052 Score = 369 bits (186), Expect = 7e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Plus Query: 174 aagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaat 233 ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 405 aagaaatacaaattttaagcaataataaagagcggcccgggttaataaaactgagaaaat 464 Query: 234 taactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaagg 293 | ||| |||||||| ||||||||||||||| ||| || ||||||||||||||||| || | Sbjct: 465 tgacttggaaagaatttttttggaagctccattgtggaattcagacctaaccattaaacg 524 Query: 294 agaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaa 353 ||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||| Sbjct: 525 agaagtagtgggaacgacagaacctatgactgcataggattttattgaaaagaatcctaa 584 Query: 354 cacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt--- 410 |||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 585 tacttcattgggtgggatggcggaacaaaccaaaagaattgccttatttggtaaggttat 644 Query: 411 --tataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 459 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 645 aatataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 695 Score = 182 bits (92), Expect = 9e-43 Identities = 138/152 (90%), Gaps = 1/152 (0%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| |||||||||||||||| || ||||||||| ||| Sbjct: 245 agcaaaactaaagggatgtggataaaaggagggatgatagaaaaaaagaagaggaa-taa 303 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| ||||| | |||||||||||||| ||||||||||||||||||||||| Sbjct: 304 gaaagatataggattcctatatgtatggtctatgagttacatcataaaaggcaatgtgat 363 Query: 122 aaagcatcaatataataaaactaatagagaat 153 |||||||||||||||||||| ||| ||||||| Sbjct: 364 aaagcatcaatataataaaaataacagagaat 395 Score = 101 bits (51), Expect = 3e-18 Identities = 72/79 (91%) Strand = Plus / Plus Query: 534 attatctataaatatagaatttagataaatatccacacacatctggatatattctagatc 593 |||||||||||||||||||| |||| ||||| ||||||||||| ||||||||| ||||| Sbjct: 767 attatctataaatatagaatatagaaaaatagacacacacatctagatatattccagatc 826 Query: 594 ttcttttttgactatatat 612 |||||| |||||||||||| Sbjct: 827 ttctttcttgactatatat 845 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 487 gattcaataagagtaaaaataagga 511 ||||||||||||||||||||||||| Sbjct: 713 gattcaataagagtaaaaataagga 737
>gb|U62789.1|CTU62789 Chusquea talamancensis ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1031 Score = 369 bits (186), Expect = 7e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Plus Query: 174 aagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaat 233 ||||| || |||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 404 aagaaataaaaatttgaagcaataataaagagcggcccgggttaataaaactgagaaaat 463 Query: 234 taactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaagg 293 | |||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||| Sbjct: 464 ttactcggaaagaaattttttggaagctccattgtgggattcagacctaaccattaaagg 523 Query: 294 agaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaa 353 ||||| ||||||||||||||||||||||| | ||||||||||| |||||||||||||||| Sbjct: 524 agaagtagtgggaacgacagaacctatgactgcataggatttttttgaaaagaatcctaa 583 Query: 354 cacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt--- 410 |||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 584 tacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttat 643 Query: 411 --tataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 459 ||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 644 aatataaattaacaaataagacaggaaagagtaaacattcgcccgcgaaat 694 Score = 198 bits (100), Expect = 2e-47 Identities = 140/152 (92%), Gaps = 1/152 (0%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||| Sbjct: 244 agcaaaactaaagggatgtggataaaaggagggatgatagaaagaaagaagaggaa-taa 302 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| | |||||||||||||| ||||||||||||||||||||||| Sbjct: 303 gaaagatataggattccaatatgtatggtctatgagttacatcataaaaggcaatgtgat 362 Query: 122 aaagcatcaatataataaaactaatagagaat 153 |||||||||||||||||||| ||| ||||||| Sbjct: 363 aaagcatcaatataataaaaataacagagaat 394 Score = 121 bits (61), Expect = 3e-24 Identities = 113/129 (87%), Gaps = 6/129 (4%) Strand = Plus / Plus Query: 487 gattcaataagagtaaaaataaggatatttttt---agaaggactacattattatctata 543 ||||||||||||||||||||||||||||||||| |||| || ||| |||||||||| Sbjct: 699 gattcaataagagtaaaaataaggatattttttttaagaaagattac---attatctata 755 Query: 544 aatatagaatttagataaatatccacacacatctggatatattctagatcttcttttttg 603 |||||| ||| |||||||| ||||||||||| ||||||||||||||||||||| ||| Sbjct: 756 aatatataatacggataaatagacacacacatctagatatattctagatcttctttcttg 815 Query: 604 actatatat 612 ||||||||| Sbjct: 816 actatatat 824
>gb|U62788.1|CSU62788 Chusquea spencei ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1031 Score = 369 bits (186), Expect = 7e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Plus Query: 174 aagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaat 233 ||||| || |||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 404 aagaaataaaaatttgaagcaataataaagagcggcccgggttaataaaactgagaaaat 463 Query: 234 taactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaagg 293 | |||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||| Sbjct: 464 ttactcggaaagaaattttttggaagctccattgtgggattcagacctaaccattaaagg 523 Query: 294 agaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaa 353 ||||| ||||||||||||||||||||||| | ||||||||||| |||||||||||||||| Sbjct: 524 agaagtagtgggaacgacagaacctatgactgcataggatttttttgaaaagaatcctaa 583 Query: 354 cacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt--- 410 |||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 584 tacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttat 643 Query: 411 --tataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 459 ||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 644 aatataaattaacaaataagacaggaaagagtaaacattcgcccgcgaaat 694 Score = 198 bits (100), Expect = 2e-47 Identities = 140/152 (92%), Gaps = 1/152 (0%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||| Sbjct: 244 agcaaaactaaagggatgtggataaaaggagggatgatagaaagaaagaagaggaa-taa 302 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| | |||||||||||||| ||||||||||||||||||||||| Sbjct: 303 gaaagatataggattccaatatgtatggtctatgagttacatcataaaaggcaatgtgat 362 Query: 122 aaagcatcaatataataaaactaatagagaat 153 |||||||||||||||||||| ||| ||||||| Sbjct: 363 aaagcatcaatataataaaaataacagagaat 394 Score = 121 bits (61), Expect = 3e-24 Identities = 113/129 (87%), Gaps = 6/129 (4%) Strand = Plus / Plus Query: 487 gattcaataagagtaaaaataaggatatttttt---agaaggactacattattatctata 543 ||||||||||||||||||||||||||||||||| |||| || ||| |||||||||| Sbjct: 699 gattcaataagagtaaaaataaggatattttttttaagaaagattac---attatctata 755 Query: 544 aatatagaatttagataaatatccacacacatctggatatattctagatcttcttttttg 603 |||||| ||| |||||||| ||||||||||| ||||||||||||||||||||| ||| Sbjct: 756 aatatataatacggataaatagacacacacatctagatatattctagatcttctttcttg 815 Query: 604 actatatat 612 ||||||||| Sbjct: 816 actatatat 824
>gb|U62787.1|CSU62787 Chusquea sp. A ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1031 Score = 369 bits (186), Expect = 7e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Plus Query: 174 aagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaat 233 ||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 407 aagaaatacaaatttgaagcaataataaagagcggcccgggttaataaaactgagaaaat 466 Query: 234 taactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaagg 293 | |||||||||||||||||||| ||||||| ||| |||||||||||||||||||| |||| Sbjct: 467 tgactcggaaagaaattttttgaaagctccattgtgggattcagacctaaccattaaagg 526 Query: 294 agaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaa 353 ||||| ||||||||||||||||||||||| | |||||||| ||||||||||||||||||| Sbjct: 527 agaagtagtgggaacgacagaacctatgactgcataggatcttattgaaaagaatcctaa 586 Query: 354 cacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt--- 410 |||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 587 tacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttat 646 Query: 411 --tataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 459 ||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 647 aatataaattaacaaataagataggaaagagtaaatattcgcccgcgaaat 697 Score = 190 bits (96), Expect = 4e-45 Identities = 139/152 (91%), Gaps = 1/152 (0%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||| Sbjct: 247 agcaaaactaaagggatgtggataaaaggagggatgatagaaagaaagaagaggaa-taa 305 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||| | |||||| | |||||||||||||| ||||||||||||||||||||||| Sbjct: 306 gaaagatatgggattccaatatgtatggtctatgagttacatcataaaaggcaatgtgat 365 Query: 122 aaagcatcaatataataaaactaatagagaat 153 |||||||||||||||||||| ||| ||||||| Sbjct: 366 aaagcatcaatataataaaaataacagagaat 397 Score = 85.7 bits (43), Expect = 2e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 542 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 601 |||||||| ||| ||||||||| ||||||||||| ||||||||||||||||||||| | Sbjct: 752 taaatatataatacagataaatagacacacacatctagatatattctagatcttctttct 811 Query: 602 tgactatatat 612 ||||||||||| Sbjct: 812 tgactatatat 822 Score = 65.9 bits (33), Expect = 1e-07 Identities = 33/33 (100%) Strand = Plus / Plus Query: 487 gattcaataagagtaaaaataaggatatttttt 519 ||||||||||||||||||||||||||||||||| Sbjct: 702 gattcaataagagtaaaaataaggatatttttt 734
>gb|U62785.1|COU62785 Chusquea oligophylla ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1032 Score = 369 bits (186), Expect = 7e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Plus Query: 174 aagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaat 233 ||||| || |||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 406 aagaaatagaaatttgaagcaataataaagagcggcccgggttaataaaactgagaaaat 465 Query: 234 taactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaagg 293 | |||||||||||||||||||| ||||||| ||| |||||||||||||||||||| |||| Sbjct: 466 tgactcggaaagaaattttttgtaagctccattgtgggattcagacctaaccattaaagg 525 Query: 294 agaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaa 353 ||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||| Sbjct: 526 agaagtagtgggaacgacagaacctatgactgcataggattttattgaaaagaatcctaa 585 Query: 354 cacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt--- 410 |||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 586 tacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttat 645 Query: 411 --tataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 459 |||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 646 aatataaattaacaaataagacaggaaagagtaaatatccgcccgcgaaat 696 Score = 190 bits (96), Expect = 4e-45 Identities = 139/152 (91%), Gaps = 1/152 (0%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||| Sbjct: 246 agcaaaactaaagggatgtggataaaaggagggatgatagaaagaaagaagaggaa-taa 304 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||| | |||||| | |||||||||||||| ||||||||||||||||||||||| Sbjct: 305 gaaagatatgggattccaatatgtatggtctatgagttacatcataaaaggcaatgtgat 364 Query: 122 aaagcatcaatataataaaactaatagagaat 153 |||||||||||||||||||| ||| ||||||| Sbjct: 365 aaagcatcaatataataaaaataacagagaat 396 Score = 85.7 bits (43), Expect = 2e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 542 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 601 |||||||| ||| ||||||||| ||||||||||| ||||||||||||||||||||| | Sbjct: 752 taaatatataatacagataaatagacacacacatctagatatattctagatcttctttct 811 Query: 602 tgactatatat 612 ||||||||||| Sbjct: 812 tgactatatat 822 Score = 65.9 bits (33), Expect = 1e-07 Identities = 33/33 (100%) Strand = Plus / Plus Query: 487 gattcaataagagtaaaaataaggatatttttt 519 ||||||||||||||||||||||||||||||||| Sbjct: 701 gattcaataagagtaaaaataaggatatttttt 733
>gb|U62784.1|CEU62784 Chusquea exasperata ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1032 Score = 369 bits (186), Expect = 7e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Plus Query: 174 aagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaat 233 ||||| || |||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 404 aagaaataaaaatttgaagcaataataaagagcggcccgggttaataaaactgagaaaat 463 Query: 234 taactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaagg 293 | |||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||| Sbjct: 464 tgactcggaaagaaattttttggaagctccattgtgggattcagacctaaccattaaagg 523 Query: 294 agaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaa 353 ||||| ||||||||||||||||||||||| | ||||||||||| |||||||||||||||| Sbjct: 524 agaagtagtgggaacgacagaacctatgactgcataggatttttttgaaaagaatcctaa 583 Query: 354 cacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt--- 410 |||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 584 tacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttat 643 Query: 411 --tataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 459 ||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 644 aatataaattaacaaataagacaggaaagagtaaacattcgcccgcgaaat 694 Score = 198 bits (100), Expect = 2e-47 Identities = 140/152 (92%), Gaps = 1/152 (0%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||| Sbjct: 244 agcaaaactaaagggatgtggataaaaggagggatgatagaaagaaagaagaggaa-taa 302 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| | |||||||||||||| ||||||||||||||||||||||| Sbjct: 303 gaaagatataggattccaatatgtatggtctatgagttacatcataaaaggcaatgtgat 362 Query: 122 aaagcatcaatataataaaactaatagagaat 153 |||||||||||||||||||| ||| ||||||| Sbjct: 363 aaagcatcaatataataaaaataacagagaat 394 Score = 109 bits (55), Expect = 1e-20 Identities = 112/130 (86%), Gaps = 7/130 (5%) Strand = Plus / Plus Query: 487 gattcaataagagtaaaaataaggatatttttt----agaaggactacattattatctat 542 ||||||||||||||||||||||||| ||||||| |||| || |||||||| |||| Sbjct: 699 gattcaataagagtaaaaataaggagatttttttttaagaaagattacattat---ctat 755 Query: 543 aaatatagaatttagataaatatccacacacatctggatatattctagatcttctttttt 602 ||||||| ||| |||||||| ||||||||||| ||||||||||||||||||||| || Sbjct: 756 aaatatataatacggataaatagacacacacatctagatatattctagatcttctttctt 815 Query: 603 gactatatat 612 |||||||||| Sbjct: 816 gactatatat 825
>gb|U54752.1|CTU54752 Chusquea tessellata ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1031 Score = 369 bits (186), Expect = 7e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Plus Query: 174 aagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaat 233 ||||| || |||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 404 aagaaataaaaatttgaagcaataataaagagcggcccgggttaataaaactgagaaaat 463 Query: 234 taactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaagg 293 | |||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||| Sbjct: 464 ttactcggaaagaaattttttggaagctccattgtgggattcagacctaaccattaaagg 523 Query: 294 agaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaa 353 ||||| ||||||||||||||||||||||| | ||||||||||| |||||||||||||||| Sbjct: 524 agaagtagtgggaacgacagaacctatgactgcataggatttttttgaaaagaatcctaa 583 Query: 354 cacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt--- 410 |||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 584 tacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttat 643 Query: 411 --tataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 459 ||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 644 aatataaattaacaaataagacaggaaagagtaaacattcgcccgcgaaat 694 Score = 198 bits (100), Expect = 2e-47 Identities = 140/152 (92%), Gaps = 1/152 (0%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||| Sbjct: 244 agcaaaactaaagggatgtggataaaaggagggatgatagaaagaaagaagaggaa-taa 302 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| | |||||||||||||| ||||||||||||||||||||||| Sbjct: 303 gaaagatataggattccaatatgtatggtctatgagttacatcataaaaggcaatgtgat 362 Query: 122 aaagcatcaatataataaaactaatagagaat 153 |||||||||||||||||||| ||| ||||||| Sbjct: 363 aaagcatcaatataataaaaataacagagaat 394 Score = 121 bits (61), Expect = 3e-24 Identities = 113/129 (87%), Gaps = 6/129 (4%) Strand = Plus / Plus Query: 487 gattcaataagagtaaaaataaggatatttttt---agaaggactacattattatctata 543 ||||||||||||||||||||||||||||||||| |||| || ||| |||||||||| Sbjct: 699 gattcaataagagtaaaaataaggatattttttttaagaaagattac---attatctata 755 Query: 544 aatatagaatttagataaatatccacacacatctggatatattctagatcttcttttttg 603 |||||| ||| |||||||| ||||||||||| ||||||||||||||||||||| ||| Sbjct: 756 aatatataatacggataaatagacacacacatctagatatattctagatcttctttcttg 815 Query: 604 actatatat 612 ||||||||| Sbjct: 816 actatatat 824
>gb|U54758.1|CSU54758 Chusquea sp. 'LC et al. 1309' ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1035 Score = 369 bits (186), Expect = 7e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Plus Query: 174 aagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaat 233 ||||| || |||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 405 aagaaataaaaatttgaagcaataataaagagcggcccgggttaataaaactgagaaaat 464 Query: 234 taactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaagg 293 | |||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||| Sbjct: 465 ttactcggaaagaaattttttggaagctccattgtgggattcagacctaaccattaaagg 524 Query: 294 agaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaa 353 ||||| ||||||||||||||||||||||| | ||||||||||| |||||||||||||||| Sbjct: 525 agaagtagtgggaacgacagaacctatgactgcataggatttttttgaaaagaatcctaa 584 Query: 354 cacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt--- 410 |||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 585 tacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttat 644 Query: 411 --tataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 459 ||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 645 aatataaattaacaaataagacaggaaagagtaaacattcgcccgcgaaat 695 Score = 198 bits (100), Expect = 2e-47 Identities = 140/152 (92%), Gaps = 1/152 (0%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||| Sbjct: 245 agcaaaactaaagggatgtggataaaaggagggatgatagaaagaaagaagaggaa-taa 303 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| | |||||||||||||| ||||||||||||||||||||||| Sbjct: 304 gaaagatataggattccaatatgtatggtctatgagttacatcataaaaggcaatgtgat 363 Query: 122 aaagcatcaatataataaaactaatagagaat 153 |||||||||||||||||||| ||| ||||||| Sbjct: 364 aaagcatcaatataataaaaataacagagaat 395 Score = 101 bits (51), Expect = 3e-18 Identities = 112/132 (84%), Gaps = 9/132 (6%) Strand = Plus / Plus Query: 487 gattcaataagagtaaaaataaggatatttttt------agaaggactacattattatct 540 ||||||||||||||||||||||||| ||||||| |||| || |||||||| || Sbjct: 700 gattcaataagagtaaaaataaggagatttttttttttaagaaagattacattat---ct 756 Query: 541 ataaatatagaatttagataaatatccacacacatctggatatattctagatcttctttt 600 ||||||||| ||| |||||||| ||||||||||| ||||||||||||||||||||| Sbjct: 757 ataaatatataatacggataaatagacacacacatctagatatattctagatcttctttc 816 Query: 601 ttgactatatat 612 |||||||||||| Sbjct: 817 ttgactatatat 828
>gb|U54754.1|CSU54754 Chusquea serpens ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1031 Score = 369 bits (186), Expect = 7e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Plus Query: 174 aagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaat 233 ||||| || |||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 404 aagaaataaaaatttgaagcaataataaagagcggcccgggttaataaaactgagaaaat 463 Query: 234 taactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaagg 293 | |||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||| Sbjct: 464 ttactcggaaagaaattttttggaagctccattgtgggattcagacctaaccattaaagg 523 Query: 294 agaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaa 353 ||||| ||||||||||||||||||||||| | ||||||||||| |||||||||||||||| Sbjct: 524 agaagtagtgggaacgacagaacctatgactgcataggatttttttgaaaagaatcctaa 583 Query: 354 cacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt--- 410 |||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 584 tacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttat 643 Query: 411 --tataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 459 ||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 644 aatataaattaacaaataagacaggaaagagtaaacattcgcccgcgaaat 694 Score = 198 bits (100), Expect = 2e-47 Identities = 140/152 (92%), Gaps = 1/152 (0%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||| Sbjct: 244 agcaaaactaaagggatgtggataaaaggagggatgatagaaagaaagaagaggaa-taa 302 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| | |||||||||||||| ||||||||||||||||||||||| Sbjct: 303 gaaagatataggattccaatatgtatggtctatgagttacatcataaaaggcaatgtgat 362 Query: 122 aaagcatcaatataataaaactaatagagaat 153 |||||||||||||||||||| ||| ||||||| Sbjct: 363 aaagcatcaatataataaaaataacagagaat 394 Score = 109 bits (55), Expect = 1e-20 Identities = 112/130 (86%), Gaps = 7/130 (5%) Strand = Plus / Plus Query: 487 gattcaataagagtaaaaataaggatatttttt----agaaggactacattattatctat 542 ||||||||||||||||||||||||| ||||||| |||| || |||||||| |||| Sbjct: 699 gattcaataagagtaaaaataaggagatttttttttaagaaagattacattat---ctat 755 Query: 543 aaatatagaatttagataaatatccacacacatctggatatattctagatcttctttttt 602 ||||||| ||| |||||||| ||||||||||| ||||||||||||||||||||| || Sbjct: 756 aaatatataataaggataaatagacacacacatctagatatattctagatcttctttctt 815 Query: 603 gactatatat 612 |||||||||| Sbjct: 816 gactatatat 825
>gb|U54753.1|CSU54753 Chusquea subtessellata ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1031 Score = 369 bits (186), Expect = 7e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Plus Query: 174 aagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaat 233 ||||| || |||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 404 aagaaataaaaatttgaagcaataataaagagcggcccgggttaataaaactgagaaaat 463 Query: 234 taactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaagg 293 | |||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||| Sbjct: 464 ttactcggaaagaaattttttggaagctccattgtgggattcagacctaaccattaaagg 523 Query: 294 agaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaa 353 ||||| ||||||||||||||||||||||| | ||||||||||| |||||||||||||||| Sbjct: 524 agaagtagtgggaacgacagaacctatgactgcataggatttttttgaaaagaatcctaa 583 Query: 354 cacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt--- 410 |||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 584 tacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttat 643 Query: 411 --tataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 459 ||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 644 aatataaattaacaaataagacaggaaagagtaaacattcgcccgcgaaat 694 Score = 198 bits (100), Expect = 2e-47 Identities = 140/152 (92%), Gaps = 1/152 (0%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||| Sbjct: 244 agcaaaactaaagggatgtggataaaaggagggatgatagaaagaaagaagaggaa-taa 302 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| | |||||||||||||| ||||||||||||||||||||||| Sbjct: 303 gaaagatataggattccaatatgtatggtctatgagttacatcataaaaggcaatgtgat 362 Query: 122 aaagcatcaatataataaaactaatagagaat 153 |||||||||||||||||||| ||| ||||||| Sbjct: 363 aaagcatcaatataataaaaataacagagaat 394 Score = 121 bits (61), Expect = 3e-24 Identities = 113/129 (87%), Gaps = 6/129 (4%) Strand = Plus / Plus Query: 487 gattcaataagagtaaaaataaggatatttttt---agaaggactacattattatctata 543 ||||||||||||||||||||||||||||||||| |||| || ||| |||||||||| Sbjct: 699 gattcaataagagtaaaaataaggatattttttttaagaaagattac---attatctata 755 Query: 544 aatatagaatttagataaatatccacacacatctggatatattctagatcttcttttttg 603 |||||| ||| |||||||| ||||||||||| ||||||||||||||||||||| ||| Sbjct: 756 aatatataatacggataaatagacacacacatctagatatattctagatcttctttcttg 815 Query: 604 actatatat 612 ||||||||| Sbjct: 816 actatatat 824
>gb|U54751.1|CRU54751 Chusquea ramosissima ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1032 Score = 369 bits (186), Expect = 7e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Plus Query: 174 aagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaat 233 ||||| || |||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 404 aagaaataaaaatttgaagcaataataaagagcggcccgggttaataaaactgagaaaat 463 Query: 234 taactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaagg 293 | |||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||| Sbjct: 464 ttactcggaaagaaattttttggaagctccattgtgggattcagacctaaccattaaagg 523 Query: 294 agaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaa 353 ||||| ||||||||||||||||||||||| | ||||||||||| |||||||||||||||| Sbjct: 524 agaagtagtgggaacgacagaacctatgactgcataggatttttttgaaaagaatcctaa 583 Query: 354 cacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt--- 410 |||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 584 tacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttat 643 Query: 411 --tataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 459 ||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 644 aatataaattaacaaataagacaggaaagagtaaacattcgcccgcgaaat 694 Score = 198 bits (100), Expect = 2e-47 Identities = 140/152 (92%), Gaps = 1/152 (0%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||| Sbjct: 244 agcaaaactaaagggatgtggataaaaggagggatgatagaaagaaagaagaggaa-taa 302 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| | |||||||||||||| ||||||||||||||||||||||| Sbjct: 303 gaaagatataggattccaatatgtatggtctatgagttacatcataaaaggcaatgtgat 362 Query: 122 aaagcatcaatataataaaactaatagagaat 153 |||||||||||||||||||| ||| ||||||| Sbjct: 363 aaagcatcaatataataaaaataacagagaat 394 Score = 109 bits (55), Expect = 1e-20 Identities = 112/130 (86%), Gaps = 7/130 (5%) Strand = Plus / Plus Query: 487 gattcaataagagtaaaaataaggatatttttt----agaaggactacattattatctat 542 ||||||||||||||||||||||||| ||||||| |||| || |||||||| |||| Sbjct: 699 gattcaataagagtaaaaataaggagatttttttttaagaaagattacattat---ctat 755 Query: 543 aaatatagaatttagataaatatccacacacatctggatatattctagatcttctttttt 602 ||||||| ||| |||||||| ||||||||||| ||||||||||||||||||||| || Sbjct: 756 aaatatataatacggataaatagacacacacatctagatatattctagatcttctttctt 815 Query: 603 gactatatat 612 |||||||||| Sbjct: 816 gactatatat 825
>gb|U54760.1|CLU54760 Chusquea liebmannii ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1032 Score = 369 bits (186), Expect = 7e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Plus Query: 174 aagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaat 233 ||||| || |||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 404 aagaaataaaaatttgaagcaataataaagagcggcccgggttaataaaactgagaaaat 463 Query: 234 taactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaagg 293 | |||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||| Sbjct: 464 tgactcggaaagaaattttttggaagctccattgtgggattcagacctaaccattaaagg 523 Query: 294 agaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaa 353 ||||| ||||||||||||||||||||||| | ||||||||||| |||||||||||||||| Sbjct: 524 agaagtagtgggaacgacagaacctatgactgcataggatttttttgaaaagaatcctaa 583 Query: 354 cacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt--- 410 |||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 584 tacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttat 643 Query: 411 --tataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 459 ||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 644 aatataaattaacaaataagacaggaaagagtaaacattcgcccgcgaaat 694 Score = 198 bits (100), Expect = 2e-47 Identities = 140/152 (92%), Gaps = 1/152 (0%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||| Sbjct: 244 agcaaaactaaagggatgtggataaaaggagggatgatagaaagaaagaagaggaa-taa 302 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| | |||||||||||||| ||||||||||||||||||||||| Sbjct: 303 gaaagatataggattccaatatgtatggtctatgagttacatcataaaaggcaatgtgat 362 Query: 122 aaagcatcaatataataaaactaatagagaat 153 |||||||||||||||||||| ||| ||||||| Sbjct: 363 aaagcatcaatataataaaaataacagagaat 394 Score = 109 bits (55), Expect = 1e-20 Identities = 112/130 (86%), Gaps = 7/130 (5%) Strand = Plus / Plus Query: 487 gattcaataagagtaaaaataaggatatttttt----agaaggactacattattatctat 542 ||||||||||||||||||||||||| ||||||| |||| || |||||||| |||| Sbjct: 699 gattcaataagagtaaaaataaggagatttttttttaagaaagattacattat---ctat 755 Query: 543 aaatatagaatttagataaatatccacacacatctggatatattctagatcttctttttt 602 ||||||| ||| |||||||| ||||||||||| ||||||||||||||||||||| || Sbjct: 756 aaatatataatacggataaatagacacacacatctagatatattctagatcttctttctt 815 Query: 603 gactatatat 612 |||||||||| Sbjct: 816 gactatatat 825
>gb|U54759.1|CCU54759 Chusquea coronalis ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1031 Score = 369 bits (186), Expect = 7e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Plus Query: 174 aagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaat 233 ||||| || |||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 403 aagaaataaaaatttgaagcaataataaagagcggcccgggttaataaaactgagaaaat 462 Query: 234 taactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaagg 293 | |||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||| Sbjct: 463 tgactcggaaagaaattttttggaagctccattgtgggattcagacctaaccattaaagg 522 Query: 294 agaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaa 353 ||||| ||||||||||||||||||||||| | ||||||||||| |||||||||||||||| Sbjct: 523 agaagtagtgggaacgacagaacctatgactgcataggatttttttgaaaagaatcctaa 582 Query: 354 cacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt--- 410 |||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 583 tacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttat 642 Query: 411 --tataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 459 ||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 643 aatataaattaacaaataagacaggaaagagtaaacattcgcccgcgaaat 693 Score = 198 bits (100), Expect = 2e-47 Identities = 140/152 (92%), Gaps = 1/152 (0%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||| Sbjct: 243 agcaaaactaaagggatgtggataaaaggagggatgatagaaagaaagaagaggaa-taa 301 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| | |||||||||||||| ||||||||||||||||||||||| Sbjct: 302 gaaagatataggattccaatatgtatggtctatgagttacatcataaaaggcaatgtgat 361 Query: 122 aaagcatcaatataataaaactaatagagaat 153 |||||||||||||||||||| ||| ||||||| Sbjct: 362 aaagcatcaatataataaaaataacagagaat 393 Score = 109 bits (55), Expect = 1e-20 Identities = 112/130 (86%), Gaps = 7/130 (5%) Strand = Plus / Plus Query: 487 gattcaataagagtaaaaataaggatatttttt----agaaggactacattattatctat 542 ||||||||||||||||||||||||| ||||||| |||| || |||||||| |||| Sbjct: 698 gattcaataagagtaaaaataaggagatttttttttaagaaagattacattat---ctat 754 Query: 543 aaatatagaatttagataaatatccacacacatctggatatattctagatcttctttttt 602 ||||||| ||| |||||||| ||||||||||| ||||||||||||||||||||| || Sbjct: 755 aaatatataatacggataaatagacacacacatctagatatattctagatcttctttctt 814 Query: 603 gactatatat 612 |||||||||| Sbjct: 815 gactatatat 824
>gb|U54757.1|CBU54757 Chusquea bilimekii ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1033 Score = 369 bits (186), Expect = 7e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Plus Query: 174 aagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaat 233 ||||| || |||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 405 aagaaataaaaatttgaagcaataataaagagcggcccgggttaataaaactgagaaaat 464 Query: 234 taactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaagg 293 | |||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||| Sbjct: 465 ttactcggaaagaaattttttggaagctccattgtgggattcagacctaaccattaaagg 524 Query: 294 agaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaa 353 ||||| ||||||||||||||||||||||| | ||||||||||| |||||||||||||||| Sbjct: 525 agaagtagtgggaacgacagaacctatgactgcataggatttttttgaaaagaatcctaa 584 Query: 354 cacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt--- 410 |||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 585 tacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttat 644 Query: 411 --tataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 459 ||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 645 aatataaattaacaaataagacaggaaagagtaaacattcgcccgcgaaat 695 Score = 198 bits (100), Expect = 2e-47 Identities = 140/152 (92%), Gaps = 1/152 (0%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||| Sbjct: 245 agcaaaactaaagggatgtggataaaaggagggatgatagaaagaaagaagaggaa-taa 303 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| | |||||||||||||| ||||||||||||||||||||||| Sbjct: 304 gaaagatataggattccaatatgtatggtctatgagttacatcataaaaggcaatgtgat 363 Query: 122 aaagcatcaatataataaaactaatagagaat 153 |||||||||||||||||||| ||| ||||||| Sbjct: 364 aaagcatcaatataataaaaataacagagaat 395 Score = 109 bits (55), Expect = 1e-20 Identities = 112/130 (86%), Gaps = 7/130 (5%) Strand = Plus / Plus Query: 487 gattcaataagagtaaaaataaggatatttttt----agaaggactacattattatctat 542 ||||||||||||||||||||||||| ||||||| |||| || |||||||| |||| Sbjct: 700 gattcaataagagtaaaaataaggagatttttttttaagaaagattacattat---ctat 756 Query: 543 aaatatagaatttagataaatatccacacacatctggatatattctagatcttctttttt 602 ||||||| ||| |||||||| ||||||||||| ||||||||||||||||||||| || Sbjct: 757 aaatatataatacggataaatagacacacacatctagatatattctagatcttctttctt 816 Query: 603 gactatatat 612 |||||||||| Sbjct: 817 gactatatat 826
>gb|U62781.1|CSU62781 Chusquea scandens ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1031 Score = 367 bits (185), Expect = 3e-98 Identities = 256/282 (90%), Gaps = 5/282 (1%) Strand = Plus / Plus Query: 183 aaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcgga 242 |||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||||| Sbjct: 413 aaatttgaagcaataataaagagcggcccgggttaataaaactgagaaaatttactcgga 472 Query: 243 aagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagt 302 ||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||| ||| Sbjct: 473 aagaaattttttggaagctccattgtgggattcagacctaaccattaaaggagaagtagt 532 Query: 303 gggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttcatt 362 |||||||||||||||||||| | ||||||||||| |||||||||||||||| |||||||| Sbjct: 533 gggaacgacagaacctatgactgcataggatttttttgaaaagaatcctaatacttcatt 592 Query: 363 gggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt-----tataaat 417 |||||||||||||||||||||| ||| ||||||||||||| | ||||||| Sbjct: 593 gggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttataatataaat 652 Query: 418 taacaaataagacaggaaagagtaaatattcgcccgcgaaat 459 |||||||||||||||||||||||||| ||||||||||||||| Sbjct: 653 taacaaataagacaggaaagagtaaacattcgcccgcgaaat 694 Score = 198 bits (100), Expect = 2e-47 Identities = 140/152 (92%), Gaps = 1/152 (0%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||| Sbjct: 244 agcaaaactaaagggatgtggataaaaggagggatgatagaaagaaagaagaggaa-taa 302 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| | |||||||||||||| ||||||||||||||||||||||| Sbjct: 303 gaaagatataggattccaatatgtatggtctatgagttacatcataaaaggcaatgtgat 362 Query: 122 aaagcatcaatataataaaactaatagagaat 153 |||||||||||||||||||| ||| ||||||| Sbjct: 363 aaagcatcaatataataaaaataacagagaat 394 Score = 121 bits (61), Expect = 3e-24 Identities = 113/129 (87%), Gaps = 6/129 (4%) Strand = Plus / Plus Query: 487 gattcaataagagtaaaaataaggatatttttt---agaaggactacattattatctata 543 ||||||||||||||||||||||||||||||||| |||| || ||| |||||||||| Sbjct: 699 gattcaataagagtaaaaataaggatattttttttaagaaagattac---attatctata 755 Query: 544 aatatagaatttagataaatatccacacacatctggatatattctagatcttcttttttg 603 |||||| ||| |||||||| ||||||||||| ||||||||||||||||||||| ||| Sbjct: 756 aatatataatacggataaatagacacacacatctagatatattctagatcttctttcttg 815 Query: 604 actatatat 612 ||||||||| Sbjct: 816 actatatat 824
>gb|AF133483.1|AF133483 Zeugites pittieri ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1107 Score = 363 bits (183), Expect = 4e-97 Identities = 263/292 (90%) Strand = Plus / Plus Query: 183 aaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcgga 242 |||||| ||||||||| ||||||| ||||||||||||||||||||||||||| ||||||| Sbjct: 451 aaatttcaagcaataaaaaagagcagcccgggttaataaaactgagaaaattgactcgga 510 Query: 243 aagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagt 302 ||||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||| || Sbjct: 511 aagaaattttttggaagctccattgcaggattcaaacctaaccattaaaggagaagctgt 570 Query: 303 gggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttcatt 362 |||||||| | ||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 571 gggaacgaaaaaacctatgactggataggattttattgaaaagaatcctaatacttcatt 630 Query: 363 gggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaaca 422 |||||||||||||||||||||| ||| |||||||||||| ||||||||||||| Sbjct: 631 gggtgggatggcggaacaaaccaaaaaaattgctttatttggtaaggttataaattaaca 690 Query: 423 aataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattaga 474 ||||||||||||||||||||| ||||||||||||||| |||||| |||||| Sbjct: 691 aataagacaggaaagagtaaacattcgcccgcgaaatctttattggattaga 742 Score = 170 bits (86), Expect = 3e-39 Identities = 126/138 (91%), Gaps = 1/138 (0%) Strand = Plus / Plus Query: 4 caaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataaat 63 |||||||||||||||||||||||| ||||||||||||| |||||||| | || ||| Sbjct: 264 caaaactaaagggatgtggataaaaggagggatgataggtagaaggaaaaataa-taaga 322 Query: 64 aagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaaaa 123 ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| || Sbjct: 323 aagatataggattccaatgtgtatggtctatgaattacatcataaaaggcaatgtgataa 382 Query: 124 agcatcaatataataaaa 141 |||||||||||||||||| Sbjct: 383 agcatcaatataataaaa 400
>gb|U62790.1|CVU62790 Chusquea vulcanalis ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1031 Score = 361 bits (182), Expect = 2e-96 Identities = 262/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Plus Query: 174 aagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaat 233 ||||| || |||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 404 aagaaataaaaatttgaagcaataataaagagcggcccgggttaataaaactgagaaaat 463 Query: 234 taactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaagg 293 | |||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||| Sbjct: 464 ttactcggaaagaaattttttggaagctccattgtgggattcagacctaaccattaaagg 523 Query: 294 agaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaa 353 ||||| ||||||||||||||||||||||| | ||||||||||| |||||||||||||||| Sbjct: 524 agaagtagtgggaacgacagaacctatgactgcataggatttttttgaaaagaatcctaa 583 Query: 354 cacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt--- 410 |||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 584 tacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttat 643 Query: 411 --tataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 459 ||||||||||| ||||||||||||||||||||| ||||||||||||||| Sbjct: 644 aatataaattaaccaataagacaggaaagagtaaacattcgcccgcgaaat 694 Score = 198 bits (100), Expect = 2e-47 Identities = 140/152 (92%), Gaps = 1/152 (0%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||| Sbjct: 244 agcaaaactaaagggatgtggataaaaggagggatgatagaaagaaagaagaggaa-taa 302 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| | |||||||||||||| ||||||||||||||||||||||| Sbjct: 303 gaaagatataggattccaatatgtatggtctatgagttacatcataaaaggcaatgtgat 362 Query: 122 aaagcatcaatataataaaactaatagagaat 153 |||||||||||||||||||| ||| ||||||| Sbjct: 363 aaagcatcaatataataaaaataacagagaat 394 Score = 121 bits (61), Expect = 3e-24 Identities = 113/129 (87%), Gaps = 6/129 (4%) Strand = Plus / Plus Query: 487 gattcaataagagtaaaaataaggatatttttt---agaaggactacattattatctata 543 ||||||||||||||||||||||||||||||||| |||| || ||| |||||||||| Sbjct: 699 gattcaataagagtaaaaataaggatattttttttaagaaagattac---attatctata 755 Query: 544 aatatagaatttagataaatatccacacacatctggatatattctagatcttcttttttg 603 |||||| ||| |||||||| ||||||||||| ||||||||||||||||||||| ||| Sbjct: 756 aatatataatacggataaatagacacacacatctagatatattctagatcttctttcttg 815 Query: 604 actatatat 612 ||||||||| Sbjct: 816 actatatat 824
>gb|U62782.1|CTU62782 Chusquea tomentosa ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1030 Score = 361 bits (182), Expect = 2e-96 Identities = 262/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Plus Query: 174 aagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaat 233 ||||| || |||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 403 aagaaataaaaatttgaagcaataataaagagcggcccgggttaataaaactgagaaaat 462 Query: 234 taactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaagg 293 | |||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||| Sbjct: 463 ttactcggaaagaaattttttggaagctccattgtgggattcagacctaaccattaaagg 522 Query: 294 agaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaa 353 ||||| ||||||||||||||||||||||| | |||||| |||| |||||||||||||||| Sbjct: 523 agaagtagtgggaacgacagaacctatgactgcatagggtttttttgaaaagaatcctaa 582 Query: 354 cacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt--- 410 |||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 583 tacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttat 642 Query: 411 --tataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 459 ||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 643 aatataaattaacaaataagacaggaaagagtaaacattcgcccgcgaaat 693 Score = 198 bits (100), Expect = 2e-47 Identities = 140/152 (92%), Gaps = 1/152 (0%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||| Sbjct: 243 agcaaaactaaagggatgtggataaaaggagggatgatagaaagaaagaagaggaa-taa 301 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| | |||||||||||||| ||||||||||||||||||||||| Sbjct: 302 gaaagatataggattccaatatgtatggtctatgagttacatcataaaaggcaatgtgat 361 Query: 122 aaagcatcaatataataaaactaatagagaat 153 |||||||||||||||||||| ||| ||||||| Sbjct: 362 aaagcatcaatataataaaaataacagagaat 393 Score = 121 bits (61), Expect = 3e-24 Identities = 113/129 (87%), Gaps = 6/129 (4%) Strand = Plus / Plus Query: 487 gattcaataagagtaaaaataaggatatttttt---agaaggactacattattatctata 543 ||||||||||||||||||||||||||||||||| |||| || ||| |||||||||| Sbjct: 698 gattcaataagagtaaaaataaggatattttttttaagaaagattac---attatctata 754 Query: 544 aatatagaatttagataaatatccacacacatctggatatattctagatcttcttttttg 603 |||||| ||| |||||||| ||||||||||| ||||||||||||||||||||| ||| Sbjct: 755 aatatataatacggataaatagacacacacatctagatatattctagatcttctttcttg 814 Query: 604 actatatat 612 ||||||||| Sbjct: 815 actatatat 823
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 359 bits (181), Expect = 7e-96 Identities = 277/309 (89%), Gaps = 3/309 (0%) Strand = Plus / Minus Query: 197 aataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaattttttgg 256 |||||||||| ||| ||||||||||||||||||||||| ||||||||| ||| || || Sbjct: 80552 aataaagagcagcc-gggttaataaaactgagaaaattgactcggaaaaaaaaatt--gg 80496 Query: 257 aagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgacagaac 316 ||||||| |||| ||||||| ||||||||||| |||||||||| |||||||||||| ||| Sbjct: 80495 aagctccattgcaggattcaaacctaaccattaaaggagaagctgtgggaacgacaaaac 80436 Query: 317 ctatgattccataggattttattgaaaagaatcctaacacttcattgggtgggatggcgg 376 |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 80435 ctatgactacataggattttattgaaaagaatcctaacacttcattgggtgggatggcgg 80376 Query: 377 aacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaataagacaggaaa 436 |||||||| ||| ||||||| |||| || |||||||||||||||||||||||| Sbjct: 80375 aacaaaccaaaaaaattgctttatttgataaggttctaaattaacaaataagacaggaaa 80316 Query: 437 gagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataa 496 ||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||||||| Sbjct: 80315 gagtaaatattcgcccgcgaaatccttattggattagaatactttaccacgattcaataa 80256 Query: 497 gagtaaaaa 505 || |||||| Sbjct: 80255 gaataaaaa 80247 Score = 157 bits (79), Expect = 5e-35 Identities = 129/144 (89%), Gaps = 5/144 (3%) Strand = Plus / Minus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 80767 agcaaaactaaagggatgtggataaaaggagggatgatagatagaaggaagaag-aataa 80709 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcat----aaaaggcaatg 117 ||||||||| ||||| | |||||||||||||||||||||||| ||||||||||| Sbjct: 80708 gaaagatataggattcccatatgtatggtctatgaattacatcataaaaaaaaggcaatg 80649 Query: 118 tgaaaaagcatcaatataataaaa 141 ||| |||||||||||||||||||| Sbjct: 80648 tgataaagcatcaatataataaaa 80625 Score = 63.9 bits (32), Expect = 6e-07 Identities = 35/36 (97%) Strand = Plus / Minus Query: 577 tggatatattctagatcttcttttttgactatatat 612 ||||||||||||||||||||||| |||||||||||| Sbjct: 80195 tggatatattctagatcttctttcttgactatatat 80160
>dbj|AP005675.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1001_G09 Length = 118018 Score = 355 bits (179), Expect = 1e-94 Identities = 339/388 (87%), Gaps = 7/388 (1%) Strand = Plus / Plus Query: 2 agcaaaactaaaggg-atgtggataaagggagggatgatagaaagaaggaagaggaaata 60 ||||||||||||||| |||| |||||| ||| |||||||||||||||||||||| ||||| Sbjct: 76433 agcaaaactaaaggggatgtagataaaaggaaggatgatagaaagaaggaagag-aaata 76491 Query: 61 aataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtga 120 | ||||||||| |||||| | |||||||||||||||||||||||||||| ||||||||| Sbjct: 76492 agaaagatataggattccaatatgtatggtctatgaattacatcataaaaagcaatgtga 76551 Query: 121 aaaagcatcaatataataaaactaatagagaatgaaaaattgtaacttga----aagaag 176 |||||||||||||||||||| ||| | ||||| |||| |||| |||| || ||| Sbjct: 76552 taaagcatcaatataataaaaataacaaagaattcgaaatcgtaatttgattgaaacaag 76611 Query: 177 aactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaa 236 || ||||||||| ||| ||||| |||||| |||| |||||||||||||||||| || | Sbjct: 76612 aaatacaaatttcaaggaataacaaagagtgtcccgagttaataaaactgagaaa-ttga 76670 Query: 237 ctcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggaga 296 || |||||||||||||||||||||||| ||| | |||| | ||||||||||| ||||||| Sbjct: 76671 cttggaaagaaattttttggaagctccattgtgagattaaaacctaaccattaaaggaga 76730 Query: 297 agcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacac 356 ||| |||||||||||||||||||||| | |||||||||| ||||||||||||| || || Sbjct: 76731 agccgtgggaacgacagaacctatgactggataggattttcttgaaaagaatcccaatac 76790 Query: 357 ttcattgggtgggatggcggaacaaacc 384 |||||||||||||||||||||||||||| Sbjct: 76791 ttcattgggtgggatggcggaacaaacc 76818 Score = 165 bits (83), Expect = 2e-37 Identities = 86/87 (98%) Strand = Plus / Plus Query: 418 taacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaata 477 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 76839 taacaaataagacaggaaagagtaaatattcgcccgcgaaatttttattgaattagaata 76898 Query: 478 ctttaccgcgattcaataagagtaaaa 504 ||||||||||||||||||||||||||| Sbjct: 76899 ctttaccgcgattcaataagagtaaaa 76925 Score = 85.7 bits (43), Expect = 2e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 542 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 601 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 76958 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 77017 Query: 602 tgactatatat 612 ||||||||||| Sbjct: 77018 tgactatatat 77028
>gb|AY912196.1| Neurolepis aristata ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1206 Score = 353 bits (178), Expect = 4e-94 Identities = 261/291 (89%), Gaps = 5/291 (1%) Strand = Plus / Plus Query: 174 aagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaat 233 ||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 414 aagaaatacaaatttgaagcaataataaagagcggcccgggttaataaaactgagaaaat 473 Query: 234 taactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaagg 293 | |||||||||||||||||||||||||||| ||| || ||||||||||||||||| |||| Sbjct: 474 tgactcggaaagaaattttttggaagctccattgtggaattcagacctaaccattaaagg 533 Query: 294 agaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaa 353 ||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||| Sbjct: 534 agaagtagtgggaacgacagaacctatgactgcataggattttattgaaaagaatcctaa 593 Query: 354 cacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt--- 410 | |||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 594 tatttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttat 653 Query: 411 --tataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 459 |||||||||||||||||| ||| ||||||||||| |||||||||||||| Sbjct: 654 aatataaattaacaaataagccagaaaagagtaaattttcgcccgcgaaat 704 Score = 198 bits (100), Expect = 2e-47 Identities = 140/152 (92%), Gaps = 1/152 (0%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||| Sbjct: 254 agcaaaactaaagggatgtggataaaaggagggatgatagaaagaaagaagaggaa-taa 312 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| | |||||||||||||| ||||||||||||||||||||||| Sbjct: 313 gaaagatataggattccaatatgtatggtctatgagttacatcataaaaggcaatgtgat 372 Query: 122 aaagcatcaatataataaaactaatagagaat 153 |||||||||||||||||||| ||| ||||||| Sbjct: 373 aaagcatcaatataataaaaataacagagaat 404 Score = 105 bits (53), Expect = 2e-19 Identities = 111/129 (86%), Gaps = 6/129 (4%) Strand = Plus / Plus Query: 487 gattcaataagagtaaaaataaggatatttttt---agaaggactacattattatctata 543 ||||||||||||||||||||||||| ||||||| |||| || |||||||| ||||| Sbjct: 709 gattcaataagagtaaaaataaggagatttttttttagaaagattacattat---ctata 765 Query: 544 aatatagaatttagataaatatccacacacatctggatatattctagatcttcttttttg 603 |||||| ||| ||||||||| ||| | ||||| ||||||||||||||||||||| ||| Sbjct: 766 aatatataatccagataaatagacactcgcatctagatatattctagatcttctttcttg 825 Query: 604 actatatat 612 ||||||||| Sbjct: 826 actatatat 834
>gb|AY847086.1| Danthoniopsis dinteri ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1152 Score = 351 bits (177), Expect = 2e-93 Identities = 285/322 (88%), Gaps = 1/322 (0%) Strand = Plus / Plus Query: 190 aagcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaat 249 ||||||||| ||||||| |||| |||| ||||||||||||||||| |||||||||||||| Sbjct: 417 aagcaataaaaaagagcagccccggttgataaaactgagaaaattgactcggaaagaaat 476 Query: 250 tttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacg 309 |||||||||||||| |||| ||||||| |||||||| || || ||||||| ||||||||| Sbjct: 477 tttttggaagctccattgcaggattcaaacctaacctttaaaagagaagctgtgggaacg 536 Query: 310 acagaacctatgattccataggattttattgaaaagaatcctaacacttcattgggtggg 369 ||| ||||||||| | ||||||||||| | ||||||||||||| ||||||||||||||| Sbjct: 537 acaaaacctatgactgcataggattttttgaaaaagaatcctaatacttcattgggtggg 596 Query: 370 atggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaataaga 429 |||||||| |||||| ||| |||||||||||| |||||||||||||||||||| Sbjct: 597 atggcggatcaaaccaaaaaaattgctttatttggtaaggttataaattaacaaataaga 656 Query: 430 caggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgat 489 |||||||||||||||||||||||||||||| ||||| |||||||||||||| | |||| Sbjct: 657 caggaaagagtaaatattcgcccgcgaaatctttattagattagaatacttta-cacgat 715 Query: 490 tcaataagagtaaaaataagga 511 ||||||||| |||||||||||| Sbjct: 716 tcaataagaataaaaataagga 737 Score = 167 bits (84), Expect = 5e-38 Identities = 128/140 (91%), Gaps = 2/140 (1%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||| ||||||||||| |||||||||||||| |||||||||| ||| ||| Sbjct: 234 agcaaaactaaagg-atgtggataaaaggagggatgatagatagaaggaagaagaa-taa 291 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| |||| ||||||||||||||||||||||||||||||||||| Sbjct: 292 gaaagatataggattccaatgtgcatggtctatgaattacatcataaaaggcaatgtgat 351 Query: 122 aaagcatcaatataataaaa 141 |||||||| ||||||||||| Sbjct: 352 aaagcatcgatataataaaa 371 Score = 48.1 bits (24), Expect = 0.034 Identities = 33/36 (91%) Strand = Plus / Plus Query: 577 tggatatattctagatcttcttttttgactatatat 612 ||||||||||||||||||| ||| || ||||||||| Sbjct: 779 tggatatattctagatcttttttctttactatatat 814
>gb|AF133477.1|AF133477 Zea mays ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1190 Score = 351 bits (177), Expect = 2e-93 Identities = 275/309 (88%), Gaps = 2/309 (0%) Strand = Plus / Plus Query: 197 aataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaattttttgg 256 ||||||||| | ||||||||||||||||||||||||| ||||||||| ||| || || Sbjct: 437 aataaagagtcagccgggttaataaaactgagaaaattgactcggaaaaaaaaatt--gg 494 Query: 257 aagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgacagaac 316 ||||||| |||| ||||||| ||||||||||| |||||||||| |||||||||||| ||| Sbjct: 495 aagctccattgcaggattcaaacctaaccattaaaggagaagctgtgggaacgacaaaac 554 Query: 317 ctatgattccataggattttattgaaaagaatcctaacacttcattgggtgggatggcgg 376 |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 555 ctatgactacataggattttattgaaaagaatcctaacacttcattgggtgggatggcgg 614 Query: 377 aacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaataagacaggaaa 436 |||||||| ||| ||||||| || | || |||||||||||||||||||||||| Sbjct: 615 aacaaaccaaaaaaattgctttatttgataggattctaaattaacaaataagacaggaaa 674 Query: 437 gagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataa 496 ||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||||||| Sbjct: 675 gagtaaatattcgcccgcgaaatccttattggattagaatactttaccacgattcaataa 734 Query: 497 gagtaaaaa 505 || |||||| Sbjct: 735 gaataaaaa 743 Score = 165 bits (83), Expect = 2e-37 Identities = 130/144 (90%), Gaps = 5/144 (3%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 223 agcaaaactaaagggatgtggataaaaggagggatgatagatagaaggaagaag-aataa 281 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcat----aaaaggcaatg 117 ||||||||| |||||| | |||||||||||||||||||||||| ||||||||||| Sbjct: 282 gaaagatataggattccaatatgtatggtctatgaattacatcataaaaaaaaggcaatg 341 Query: 118 tgaaaaagcatcaatataataaaa 141 ||| |||||||||||||||||||| Sbjct: 342 tgataaagcatcaatataataaaa 365 Score = 63.9 bits (32), Expect = 6e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 577 tggatatattctagatcttcttttttgactatatat 612 ||||||||||||||||||||||| |||||||||||| Sbjct: 796 tggatatattctagatcttctttcttgactatatat 831
>gb|U62791.1|CJU62791 Chusquea juergensii ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1059 Score = 351 bits (177), Expect = 2e-93 Identities = 263/293 (89%), Gaps = 7/293 (2%) Strand = Plus / Plus Query: 174 aagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaat 233 ||||| || |||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 408 aagaaataaaaatttgaagcaataataaagagcggcccgggttaataaaactgagaaaat 467 Query: 234 ta--actcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaa 291 | |||||||||||||||||||||||||||| ||| |||||||||||||||||||| || Sbjct: 468 ttttactcggaaagaaattttttggaagctccattgtgggattcagacctaaccattaaa 527 Query: 292 ggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcct 351 ||||||| ||||||||||||||||||||||| | ||||||||||| |||||||||||||| Sbjct: 528 ggagaagtagtgggaacgacagaacctatgactgcataggatttttttgaaaagaatcct 587 Query: 352 aacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt- 410 || |||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 588 aatacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggtt 647 Query: 411 ----tataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 459 ||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 648 ataatataaattaacaaataagacaggaaagagtaaacattcgcccgcgaaat 700 Score = 172 bits (87), Expect = 9e-40 Identities = 140/156 (89%), Gaps = 5/156 (3%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||| Sbjct: 244 agcaaaactaaagggatgtggataaaaggagggatgatagaaagaaagaagagg-aataa 302 Query: 62 ataagatatagaattcca----ctgtgtatggtctatgaattacatcataaaaggcaatg 117 ||||||||| |||||| | |||||||||||||| |||||||||||||||||||| Sbjct: 303 gaaagatataggattccaatatgtatgtatggtctatgagttacatcataaaaggcaatg 362 Query: 118 tgaaaaagcatcaatataataaaactaatagagaat 153 ||| |||||||||||||||||||| ||| ||||||| Sbjct: 363 tgataaagcatcaatataataaaaataacagagaat 398 Score = 109 bits (55), Expect = 1e-20 Identities = 112/130 (86%), Gaps = 7/130 (5%) Strand = Plus / Plus Query: 487 gattcaataagagtaaaaataaggatatttttt----agaaggactacattattatctat 542 ||||||||||||||||||||||||| ||||||| |||| || |||||||| |||| Sbjct: 705 gattcaataagagtaaaaataaggagatttttttttaagaaagattacattat---ctat 761 Query: 543 aaatatagaatttagataaatatccacacacatctggatatattctagatcttctttttt 602 ||||||| ||| |||||||| ||||||||||| ||||||||||||||||||||| || Sbjct: 762 aaatatataatacggataaatagacacacacatctagatatattctagatcttctttctt 821 Query: 603 gactatatat 612 |||||||||| Sbjct: 822 gactatatat 831
>gb|U54756.1|CPU54756 Chusquea pinifolia ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1038 Score = 351 bits (177), Expect = 2e-93 Identities = 263/293 (89%), Gaps = 7/293 (2%) Strand = Plus / Plus Query: 174 aagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaat 233 ||||| || |||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 408 aagaaataaaaatttgaagcaataataaagagcggcccgggttaataaaactgagaaaat 467 Query: 234 ta--actcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaa 291 | |||||||||||||||||||||||||||| ||| |||||||||||||||||||| || Sbjct: 468 ttttactcggaaagaaattttttggaagctccattgtgggattcagacctaaccattaaa 527 Query: 292 ggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcct 351 ||||||| ||||||||||||||||||||||| | ||||||||||| |||||||||||||| Sbjct: 528 ggagaagtagtgggaacgacagaacctatgactgcataggatttttttgaaaagaatcct 587 Query: 352 aacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt- 410 || |||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 588 aatacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggtt 647 Query: 411 ----tataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 459 ||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 648 ataatataaattaacaaataagacaggaaagagtaaacattcgcccgcgaaat 700 Score = 172 bits (87), Expect = 9e-40 Identities = 140/156 (89%), Gaps = 5/156 (3%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||| Sbjct: 244 agcaaaactaaagggatgtggataaaaggagggatgatagaaagaaagaagagg-aataa 302 Query: 62 ataagatatagaattcca----ctgtgtatggtctatgaattacatcataaaaggcaatg 117 ||||||||| |||||| | |||||||||||||| |||||||||||||||||||| Sbjct: 303 gaaagatataggattccaatatgtatgtatggtctatgagttacatcataaaaggcaatg 362 Query: 118 tgaaaaagcatcaatataataaaactaatagagaat 153 ||| |||||||||||||||||||| ||| ||||||| Sbjct: 363 tgataaagcatcaatataataaaaataacagagaat 398 Score = 109 bits (55), Expect = 1e-20 Identities = 112/130 (86%), Gaps = 7/130 (5%) Strand = Plus / Plus Query: 487 gattcaataagagtaaaaataaggatatttttt----agaaggactacattattatctat 542 ||||||||||||||||||||||||| ||||||| |||| || |||||||| |||| Sbjct: 705 gattcaataagagtaaaaataaggagatttttttttaagaaagattacattat---ctat 761 Query: 543 aaatatagaatttagataaatatccacacacatctggatatattctagatcttctttttt 602 ||||||| ||| |||||||| ||||||||||| ||||||||||||||||||||| || Sbjct: 762 aaatatataatacggataaatagacacacacatctagatatattctagatcttctttctt 821 Query: 603 gactatatat 612 |||||||||| Sbjct: 822 gactatatat 831
>gb|AY847083.1| Paspalum conjugatum ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1157 Score = 349 bits (176), Expect = 7e-93 Identities = 305/352 (86%), Gaps = 10/352 (2%) Strand = Plus / Plus Query: 157 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 216 |||| ||||||||||| || || || ||||| ||||||||| ||||||| ||||||||| Sbjct: 392 aaatcgtaacttgaaacaacaaataaaaattgaaagcaataaaaaagagcagcccgggtt 451 Query: 217 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 276 |||||||||||||||||| |||||||||| |||||||| |||||||| |||| ||||||| Sbjct: 452 aataaaactgagaaaattgactcggaaagcaatttttttgaagctccattgcaggattca 511 Query: 277 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 336 ||||| ||||| |||||||||| |||||||||||| ||||||||| | ||||||||||| Sbjct: 512 aacctagccattaaaggagaagctgtgggaacgacaaaacctatgactgcataggatttt 571 Query: 337 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtc 396 ||||||||||||||||||||||||||||||||||||||||| |||||| ||| Sbjct: 572 attgaaaagaatcctaacacttcattgggtgggatggcggagcaaaccaaaaaaattgct 631 Query: 397 ttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgcccgcga 456 ||||||| |||| || |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 632 ttatttgataaggttctaaattaacaaataagacaggaaagagtaaatattcgcccgcga 691 Query: 457 aattcttattgaattagaatactttaccgcgattcaataagagtaaaaataa 508 ||| |||| |||||||||| ||||||||||||| ||||||||| Sbjct: 692 aatcctta----------atactttaccacgattcaataagaataaaaataa 733 Score = 168 bits (85), Expect = 1e-38 Identities = 130/143 (90%), Gaps = 4/143 (2%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 229 agcaaaactaaagggatgtggataaaaggagggatgatagatagaaggaagaag-aataa 287 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcat---aaaaggcaatgt 118 |||||||| |||||| |||||||||||||||||||||||||| |||||||||||| Sbjct: 288 gagagatataggattccaatgtgtatggtctatgaattacatcataaaaaaaggcaatgt 347 Query: 119 gaaaaagcatcaatataataaaa 141 || |||||||||||||||||||| Sbjct: 348 gataaagcatcaatataataaaa 370 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 577 tggatatattctagatcttcttttttgactatatat 612 |||||||| |||||||||||||| |||||||||||| Sbjct: 776 tggatatactctagatcttctttcttgactatatat 811
>gb|AY847078.1| Eragrostis curvula ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1163 Score = 349 bits (176), Expect = 7e-93 Identities = 295/337 (87%), Gaps = 10/337 (2%) Strand = Plus / Plus Query: 183 aaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcgga 242 |||||| ||||||||||||||||| |||||||||||||||||||||| |||||||||||| Sbjct: 425 aaatttaaagcaataataaagagcagcccgggttaataaaactgagagaattaactcgga 484 Query: 243 aagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagt 302 ||| |||||||||||| |||| ||||||| ||||||||||| |||||||||| || Sbjct: 485 aag------tttggaagctccattgcaggattcaaacctaaccattaaaggagaagctgt 538 Query: 303 gggaacgacagaacctatgattccataggattt----tattgaaaagaatcctaacactt 358 |||||||||| || |||||| | |||||||||| |||||||||||||||||| |||| Sbjct: 539 gggaacgacaaaagctatgactgcataggatttattttattgaaaagaatcctaatactt 598 Query: 359 cattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaatt 418 |||||||||||||||||||||||||| ||| ||||||| |||| ||||||||| Sbjct: 599 cattgggtgggatggcggaacaaaccaaaaaaattgctttatttgttaaggttataaatt 658 Query: 419 aacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaatac 478 ||||||||||||| ||||||||||||||||||||||||||| ||||||| ||| |||||| Sbjct: 659 aacaaataagacaagaaagagtaaatattcgcccgcgaaatccttattggattcgaatac 718 Query: 479 tttaccgcgattcaataagagtaaaaataaggatatt 515 ||||| ||||||||||| ||||||||||||||||| Sbjct: 719 tttactatgattcaataagggtaaaaataaggatatt 755 Score = 186 bits (94), Expect = 6e-44 Identities = 128/138 (92%), Gaps = 1/138 (0%) Strand = Plus / Plus Query: 4 caaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataaat 63 |||||||||||||||||||||||| |||||||||||||| |||||||||| ||| ||| Sbjct: 238 caaaactaaagggatgtggataaaaggagggatgatagatagaaggaagaagaa-taaga 296 Query: 64 aagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaaaa 123 |||||||| |||||| |||||||||||||||||||||||||||||||||||||||| || Sbjct: 297 aagatataagattccaatgtgtatggtctatgaattacatcataaaaggcaatgtgataa 356 Query: 124 agcatcaatataataaaa 141 |||||||||||||||||| Sbjct: 357 agcatcaatataataaaa 374 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 577 tggatatattctagatcttcttttttgactatatat 612 ||||||||||||||||||| ||| |||||||||||| Sbjct: 795 tggatatattctagatcttttttcttgactatatat 830
>gb|AF133480.1|AF133480 Zoysia matrella ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1204 Score = 347 bits (175), Expect = 3e-92 Identities = 296/337 (87%), Gaps = 5/337 (1%) Strand = Plus / Plus Query: 183 aaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcgga 242 |||||| ||| ||||| ||||||| ||||| ||||||||||||||||||||| ||||||| Sbjct: 451 aaatttaaagaaataaaaaagagcagcccgcgttaataaaactgagaaaattgactcgga 510 Query: 243 aagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagt 302 ||||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||| || Sbjct: 511 aagaaattttttggaagctccattgcaggattcaaacctaaccattaaaggagaagctgt 570 Query: 303 gggaacgacagaacctatgattccataggatt----ttattgaaaagaatcctaacactt 358 |||||||||| ||||||||| | ||||||||| ||||||||||||||||||| |||| Sbjct: 571 gggaacgacaaaacctatgactgcataggattgattttattgaaaagaatcctaatactt 630 Query: 359 cattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaatt 418 |||||||||||||||||||||||||| ||| |||||||||||| ||||||||| Sbjct: 631 cattgggtgggatggcggaacaaaccaaaaaaattgctttatttggtaaggttataaatt 690 Query: 419 aacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaatac 478 ||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 691 aacaaataagacaagaaagagtaaatattcgcccgcgaaatctttattggattagaatag 750 Query: 479 tttaccgcgattcaataagagtaaaaataaggatatt 515 ||||| ||| || || |||| |||||||||||||| Sbjct: 751 tttactatgatcca-taggagtcaaaataaggatatt 786 Score = 145 bits (73), Expect = 2e-31 Identities = 126/140 (90%), Gaps = 4/140 (2%) Strand = Plus / Plus Query: 5 aaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaa--ataaa 62 ||||||||||||||||||||||| |||||||||||||| |||||||||| ||| | ||| Sbjct: 261 aaaactaaagggatgtggataaaaggagggatgatagatagaaggaagaagaataagaaa 320 Query: 63 taa-gatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 || |||||| |||||| | |||||||||||||||||||||||||||| ||||||||| Sbjct: 321 gaaagatataagattccaatatgtatggtctatgaattacatcataaaa-gcaatgtgat 379 Query: 122 aaagcatcaatataataaaa 141 |||||||||||||||||||| Sbjct: 380 aaagcatcaatataataaaa 399 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 580 atatattctagatcttcttttttgactatatat 612 |||||||| ||||||||||| || ||||||||| Sbjct: 839 atatattccagatcttctttctttactatatat 871
>gb|AY847105.1| Zeugites americanus ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 944 Score = 343 bits (173), Expect = 4e-91 Identities = 324/375 (86%), Gaps = 5/375 (1%) Strand = Plus / Plus Query: 104 cataaaaggcaatgtgaaaaagcatcaatataataa----aactaatagagaatgaaaaa 159 ||||||||||||||||| |||||||||||||||||| || || ||||||| ||| Sbjct: 219 cataaaaggcaatgtgataaagcatcaatataataagaaaaaaaaagagagaattcgaaa 278 Query: 160 ttgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaat 219 | ||||||||||| || || || |||||| ||||||||| ||||||| ||||| |||||| Sbjct: 279 tcgtaacttgaaacaataaataaaaatttaaagcaataaaaaagagcagcccgagttaat 338 Query: 220 aaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagac 279 ||||||||||||||| || ||||||||||||||||||||||||| |||| ||||||| || Sbjct: 339 aaaactgagaaaattgacccggaaagaaattttttggaagctccattgcaggattcaaac 398 Query: 280 ctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggattttatt 339 ||||||||| |||||||||| |||||||||| | ||||||||| | |||||||||||| Sbjct: 399 ctaaccattaaaggagaagctgtgggaacgaaaaaacctatgactggataggattttatg 458 Query: 340 gaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtctta 399 |||||||||||||| |||||||||||||||||||||||||||||| | | ||| Sbjct: 459 gaaaagaatcctaatacttcattgggtgggatggcggaacaaaccaaaaaaatggcttta 518 Query: 400 tttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 459 ||||||||| ||||||| ||||||||||| |||||||||||||| ||||||||||||||| Sbjct: 519 tttggtaaggttataaa-taacaaataaggcaggaaagagtaaacattcgcccgcgaaat 577 Query: 460 tcttattgaattaga 474 |||||| |||||| Sbjct: 578 ctttattggattaga 592
>gb|U62783.1|CSU62783 Chusquea sp. B ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1031 Score = 343 bits (173), Expect = 4e-91 Identities = 253/282 (89%), Gaps = 5/282 (1%) Strand = Plus / Plus Query: 183 aaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcgga 242 |||||| |||| |||||||||||| ||||||||||||||||||||||||||| ||||||| Sbjct: 413 aaatttgaagccataataaagagcggcccgggttaataaaactgagaaaatttactcgga 472 Query: 243 aagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagt 302 ||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||| | | Sbjct: 473 aagaaattttttggaagctccattgtgggattcagacctaaccattaaaggagaagtaat 532 Query: 303 gggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttcatt 362 |||||||||||||||||||| | ||||||||||| |||||||||||||||| |||||||| Sbjct: 533 gggaacgacagaacctatgactgcataggatttttttgaaaagaatcctaatacttcatt 592 Query: 363 gggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt-----tataaat 417 |||||||||||||||||||||| | | ||||||||||||| | ||||||| Sbjct: 593 gggtgggatggcggaacaaaccaaaaaaatggccttatttggtaaggttataatataaat 652 Query: 418 taacaaataagacaggaaagagtaaatattcgcccgcgaaat 459 |||||||||||||||||||||||||| ||||||||||||||| Sbjct: 653 taacaaataagacaggaaagagtaaacattcgcccgcgaaat 694 Score = 190 bits (96), Expect = 4e-45 Identities = 139/152 (91%), Gaps = 1/152 (0%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||| Sbjct: 244 agcaaaactaaagggatgtggataaaaggagggatgatagaaagaaagaagaggaa-taa 302 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| | |||||||||||||| ||||||||||||||||||||||| Sbjct: 303 gaaagatataggattccaatatgtatggtctatgagttacatcataaaaggcaatgtgat 362 Query: 122 aaagcatcaatataataaaactaatagagaat 153 |||||||| ||||||||||| ||| ||||||| Sbjct: 363 aaagcatccatataataaaaataacagagaat 394 Score = 121 bits (61), Expect = 3e-24 Identities = 113/129 (87%), Gaps = 6/129 (4%) Strand = Plus / Plus Query: 487 gattcaataagagtaaaaataaggatatttttt---agaaggactacattattatctata 543 ||||||||||||||||||||||||||||||||| |||| || ||| |||||||||| Sbjct: 699 gattcaataagagtaaaaataaggatattttttttaagaaagattac---attatctata 755 Query: 544 aatatagaatttagataaatatccacacacatctggatatattctagatcttcttttttg 603 |||||| ||| |||||||| ||||||||||| ||||||||||||||||||||| ||| Sbjct: 756 aatatataatacggataaatagacacacacatctagatatattctagatcttctttcttg 815 Query: 604 actatatat 612 ||||||||| Sbjct: 816 actatatat 824
>gb|U54755.1|CWU54755 Chusquea windischii ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1034 Score = 343 bits (173), Expect = 4e-91 Identities = 262/293 (89%), Gaps = 7/293 (2%) Strand = Plus / Plus Query: 174 aagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaat 233 ||||| || |||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 404 aagaaataaaaatttgaagcaataataaagagcggcccgggttaataaaactgagaaaat 463 Query: 234 ta--actcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaa 291 | |||||||||||||||||||||||||||| ||| |||||||||||||||||||| || Sbjct: 464 ttttactcggaaagaaattttttggaagctccattgtgggattcagacctaaccattaaa 523 Query: 292 ggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcct 351 ||||||| ||||||||||||||||||||||| | | ||||||||| |||||||||||||| Sbjct: 524 ggagaagtagtgggaacgacagaacctatgactgcctaggatttttttgaaaagaatcct 583 Query: 352 aacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt- 410 || |||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 584 aatacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggtt 643 Query: 411 ----tataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 459 ||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 644 ataatataaattaacaaataagacaggaaagagtaaacattcgcccgcgaaat 696 Score = 198 bits (100), Expect = 2e-47 Identities = 140/152 (92%), Gaps = 1/152 (0%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||| Sbjct: 244 agcaaaactaaagggatgtggataaaaggagggatgatagaaagaaagaagaggaa-taa 302 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| | |||||||||||||| ||||||||||||||||||||||| Sbjct: 303 gaaagatataggattccaatatgtatggtctatgagttacatcataaaaggcaatgtgat 362 Query: 122 aaagcatcaatataataaaactaatagagaat 153 |||||||||||||||||||| ||| ||||||| Sbjct: 363 aaagcatcaatataataaaaataacagagaat 394 Score = 109 bits (55), Expect = 1e-20 Identities = 112/130 (86%), Gaps = 7/130 (5%) Strand = Plus / Plus Query: 487 gattcaataagagtaaaaataaggatatttttt----agaaggactacattattatctat 542 ||||||||||||||||||||||||| ||||||| |||| || |||||||| |||| Sbjct: 701 gattcaataagagtaaaaataaggagatttttttttaagaaagattacattat---ctat 757 Query: 543 aaatatagaatttagataaatatccacacacatctggatatattctagatcttctttttt 602 ||||||| ||| |||||||| ||||||||||| ||||||||||||||||||||| || Sbjct: 758 aaatatataatacggataaatagacacacacatctagatatattctagatcttctttctt 817 Query: 603 gactatatat 612 |||||||||| Sbjct: 818 gactatatat 827
>ref|XM_506652.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1001_G09.24 mRNA Length = 1742 Score = 341 bits (172), Expect = 2e-90 Identities = 325/373 (87%), Gaps = 6/373 (1%) Strand = Plus / Plus Query: 16 gatgtggataaagggagggatgatagaaagaaggaagaggaaataaataagatatagaat 75 ||||| |||||| ||| |||||||||||||||||||||| |||||| ||||||||| || Sbjct: 1 gatgtagataaaaggaaggatgatagaaagaaggaagag-aaataagaaagatataggat 59 Query: 76 tccactgtgtatggtctatgaattacatcataaaaggcaatgtgaaaaagcatcaatata 135 |||| | |||||||||||||||||||||||||||| ||||||||| |||||||||||||| Sbjct: 60 tccaatatgtatggtctatgaattacatcataaaaagcaatgtgataaagcatcaatata 119 Query: 136 ataaaactaatagagaatgaaaaattgtaacttga----aagaagaactacaaattttaa 191 |||||| ||| | ||||| |||| |||| |||| || ||||| ||||||||| || Sbjct: 120 ataaaaataacaaagaattcgaaatcgtaatttgattgaaacaagaaatacaaatttcaa 179 Query: 192 gcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaattt 251 | ||||| |||||| |||| |||||||||||||||||| || ||| |||||||||||| Sbjct: 180 ggaataacaaagagtgtcccgagttaataaaactgagaaa-ttgacttggaaagaaattt 238 Query: 252 tttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 311 |||||||||||| ||| | |||| | ||||||||||| |||||||||| ||||||||||| Sbjct: 239 tttggaagctccattgtgagattaaaacctaaccattaaaggagaagccgtgggaacgac 298 Query: 312 agaacctatgattccataggattttattgaaaagaatcctaacacttcattgggtgggat 371 ||||||||||| | |||||||||| ||||||||||||| || ||||||||||||||||| Sbjct: 299 agaacctatgactggataggattttcttgaaaagaatcccaatacttcattgggtgggat 358 Query: 372 ggcggaacaaacc 384 ||||||||||||| Sbjct: 359 ggcggaacaaacc 371 Score = 165 bits (83), Expect = 2e-37 Identities = 86/87 (98%) Strand = Plus / Plus Query: 418 taacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaata 477 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 392 taacaaataagacaggaaagagtaaatattcgcccgcgaaatttttattgaattagaata 451 Query: 478 ctttaccgcgattcaataagagtaaaa 504 ||||||||||||||||||||||||||| Sbjct: 452 ctttaccgcgattcaataagagtaaaa 478 Score = 85.7 bits (43), Expect = 2e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 542 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 601 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 511 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 570 Query: 602 tgactatatat 612 ||||||||||| Sbjct: 571 tgactatatat 581
>gb|AY847103.1| Pohlidium petiolatum rpl16 gene, intron; chloroplast Length = 1018 Score = 339 bits (171), Expect = 6e-90 Identities = 260/292 (89%) Strand = Plus / Plus Query: 183 aaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcgga 242 |||||| ||||||||| ||||||| |||| |||||||||||||||||||||| ||||||| Sbjct: 372 aaatttcaagcaataaaaaagagcagccccggttaataaaactgagaaaattgactcgga 431 Query: 243 aagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagt 302 ||||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||| || Sbjct: 432 aagaaattttttggaagctccattgcaggattcaaacctaaccattaaaggagaagctgt 491 Query: 303 gggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttcatt 362 |||||||||| ||||||||| | |||||||||| |||||||||||||||| |||||||| Sbjct: 492 gggaacgacaaaacctatgactggataggatttttttgaaaagaatcctaatacttcatt 551 Query: 363 gggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaaca 422 |||||||||||||||||||||| | | |||||||||||| ||||||||||||| Sbjct: 552 gggtgggatggcggaacaaaccaaaaaaatggctttatttggtaaggttataaattaaca 611 Query: 423 aataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattaga 474 ||||||||||||||| ||||| ||||||||||||||| |||||| |||||| Sbjct: 612 aataagacaggaaagggtaaacattcgcccgcgaaatctttattggattaga 663 Score = 141 bits (71), Expect = 3e-30 Identities = 119/134 (88%), Gaps = 1/134 (0%) Strand = Plus / Plus Query: 4 caaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataaat 63 |||||||||||||||| ||||| ||||||||||||| |||||||| | ||| ||| Sbjct: 188 caaaactaaagggatgcanataaaaggagggatgataggtagaaggaaaaagaa-taaga 246 Query: 64 aagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaaaa 123 ||||||||| |||||| ||||||||||||||||||||| |||||||||||||||||| || Sbjct: 247 aagatataggattccaatgtgtatggtctatgaattacgtcataaaaggcaatgtgataa 306 Query: 124 agcatcaatataat 137 |||||||||||||| Sbjct: 307 agcatcaatataat 320
>gb|AY847094.1| Centotheca lappacea ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 815 Score = 335 bits (169), Expect = 1e-88 Identities = 307/355 (86%), Gaps = 9/355 (2%) Strand = Plus / Plus Query: 157 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 216 |||| ||||||| ||| || || || |||||| |||| ||| ||||||| ||| ||||| Sbjct: 52 aaatcgtaacttcaaacaataaataaaaatttaaagcggtaaaaaagagcagccggggtt 111 Query: 217 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 276 |||||||||||||||||| | ||||||| |||||||||||||||||| |||| ||||||| Sbjct: 112 aataaaactgagaaaattgattcggaaataaattttttggaagctccattgcaggattca 171 Query: 277 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 336 ||||||||||| |||||||||| |||||||||||| ||| ||||| | ||||||||||| Sbjct: 172 aacctaaccattaaaggagaagctgtgggaacgacaaaacttatgactgcataggatttt 231 Query: 337 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtc 396 ||||||||||||||||| ||||||||||| |||||||||||||||||| ||| Sbjct: 232 attgaaaagaatcctaatacttcattgggcgggatggcggaacaaaccaaaaaaattgct 291 Query: 397 ttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgcccgcga 456 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 292 ttatttggtaaggttataaattaacaaataagacaggaaagagtaaatattcgcccgcga 351 Query: 457 aattcttattgaattagaatactttaccgcgattcaataagagtaaaaataagga 511 | || |||||||||||||| | ||||||||||||| |||||||||||| Sbjct: 352 a--------tggattagaatacttta-cacgattcaataagaataaaaataagga 397 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 577 tggatatattctagatcttcttttttgactat 608 ||||||||||||||||||||||| |||||||| Sbjct: 438 tggatatattctagatcttctttattgactat 469
>gb|AF133491.1|AF133491 Joinvillea ascendens ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1229 Score = 327 bits (165), Expect = 2e-86 Identities = 281/319 (88%), Gaps = 6/319 (1%) Strand = Plus / Plus Query: 193 caataataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaatttt 252 |||||||||||||| || ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 439 caataataaagagcaccctgggttaataaaactgagaaaattgactcggaaagaaatttt 498 Query: 253 tt-ggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 311 || ||||||||| ||||||| |||||||||||||||| | |||||||| ||||||||||| Sbjct: 499 tttggaagctccattgcggggttcagacctaaccattaatggagaagctgtgggaacgac 558 Query: 312 agaacctatgattccataggattttattgaaaa-gaatcctaacacttcattgggtggga 370 ||||||||||| | ||||||||| ||||||||| ||||||||| | |||||||||||||| Sbjct: 559 agaacctatgactgcataggattctattgaaaacgaatcctaagaattcattgggtggga 618 Query: 371 tggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaa----caaata 426 |||||||||||||| ||||||||||||||||| |||| |||| | | |||| Sbjct: 619 tggcggaacaaaccaagaaaattgtcttatttggtaaggttatgaattgaacctcgaata 678 Query: 427 agacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgc 486 ||||||||||||||||||||||||||||||||| |||||| |||| |||| ||| |||| Sbjct: 679 agacaggaaagagtaaatattcgcccgcgaaatctttattggattacaatattttgccgc 738 Query: 487 gattcaataagagtaaaaa 505 ||||| ||||||||||||| Sbjct: 739 gattcgataagagtaaaaa 757 Score = 153 bits (77), Expect = 8e-34 Identities = 117/129 (90%), Gaps = 1/129 (0%) Strand = Plus / Plus Query: 10 taaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataaataagata 69 |||||||||||||||||| ||||||||||||||||||| ||| | ||| ||| |||||| Sbjct: 258 taaagggatgtggataaatggagggatgatagaaagaaagaacaagaa-taagaaagata 316 Query: 70 tagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaaaaagcatc 129 ||| |||||| | |||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 317 taggattccaatatgtatggtctatgaattacatcataaaaggcagtgtgagaaagcatc 376 Query: 130 aatataata 138 ||||||||| Sbjct: 377 aatataata 385
>gb|AY912198.1| Guadua angustifolia ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1079 Score = 323 bits (163), Expect = 4e-85 Identities = 240/268 (89%), Gaps = 5/268 (1%) Strand = Plus / Plus Query: 169 gaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgag 228 |||| ||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||| Sbjct: 292 gaaacaagaaatacaaatttgaagcaataataaagagcggcccgggttaataaaactgag 351 Query: 229 aaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccatt 288 |||||| ||| |||||||||||||||||||||||| ||| || ||||||||||||||||| Sbjct: 352 aaaattgacttggaaagaaattttttggaagctccattgtggaattcagacctaaccatt 411 Query: 289 caaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaat 348 ||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||| Sbjct: 412 aaaggagaagtagtgggaacgacagaacctatgactgcataggattttattgaaaagaat 471 Query: 349 cctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaag 408 ||||| |||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 472 cctaatacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaag 531 Query: 409 tt-----tataaattaacaaataagaca 431 | ||||||||||||||||||||| Sbjct: 532 gttctaatataaattaacaaataagaca 559 Score = 178 bits (90), Expect = 1e-41 Identities = 139/155 (89%), Gaps = 9/155 (5%) Strand = Plus / Plus Query: 464 attgaattagaatactttaccgcgattcaataagagtaaaaataaggatatttttt---- 519 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 562 attgaattagaatactttaccgcgattcaataagagtaaaaataaggagatttttttttt 621 Query: 520 --agaaggactacattattatctataaatatagaatttagataaatatccacacacatct 577 ||||||| |||||||| ||||||||||||||| |||||||||| ||||||||||| Sbjct: 622 taagaaggattacattat---ctataaatatagaatatagataaatagacacacacatct 678 Query: 578 ggatatattctagatcttcttttttgactatatat 612 ||||||||||||||||||||| |||||||||||| Sbjct: 679 agatatattctagatcttctttcttgactatatat 713 Score = 155 bits (78), Expect = 2e-34 Identities = 116/126 (92%), Gaps = 2/126 (1%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||| Sbjct: 121 agcaaaactaaagggatgtggataaaaggagggatgatagaaagaaagaagagg-aataa 179 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| | ||||||||||||||||||||||||||||||| |||||| Sbjct: 180 gaaagatataggattccaatatgtatggtctatgaattacatcataaaaggc-atgtgat 238 Query: 122 aaagca 127 |||||| Sbjct: 239 aaagca 244
>gb|AF133478.1|AF133478 Sorghum bicolor ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1200 Score = 323 bits (163), Expect = 4e-85 Identities = 258/293 (88%), Gaps = 8/293 (2%) Strand = Plus / Plus Query: 213 ggttaataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcggga 272 |||||||||||||||||||||| |||||||||||||||||||||||||||| |||| ||| Sbjct: 478 ggttaataaaactgagaaaattgactcggaaagaaattttttggaagctccattgcagga 537 Query: 273 ttcagacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccatagga 332 |||| ||||||||||| |||||||||| |||||||||||| | ||||||| | ||||||| Sbjct: 538 ttcaaacctaaccattaaaggagaagctgtgggaacgacaaagcctatgactacatagga 597 Query: 333 ttttattgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnt 392 |||||||| ||||||||||||| ||||||||||||||||||||||||||||| | Sbjct: 598 ttttattggaaagaatcctaactcttcattgggtgggatggcggaacaaaccaaaaaatt 657 Query: 393 tgtcttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgccc 452 || ||||||| |||| || |||||||||||||||||||||||||||||||||||||||| Sbjct: 658 tgctttatttgataaggttctaaattaacaaataagacaggaaagagtaaatattcgccc 717 Query: 453 gcgaaattcttattgaattagaatactttaccgcgattcaataagagtaaaaa 505 ||||||| | ||||||||||||||| ||||||||||||| |||||| Sbjct: 718 gcgaaatcc--------ttagaatactttaccacgattcaataagaataaaaa 762 Score = 168 bits (85), Expect = 1e-38 Identities = 130/143 (90%), Gaps = 4/143 (2%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 254 agcaaaactaaagggatgtggataaaaggagggatgatagatagaaggaagaag-aataa 312 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcat---aaaaggcaatgt 118 ||||||||| ||||| |||||||||||||||||||||||||| |||||||||||| Sbjct: 313 gaaagatataggattcccatgtgtatggtctatgaattacatcataaaaaaaggcaatgt 372 Query: 119 gaaaaagcatcaatataataaaa 141 || |||||||||||||||||||| Sbjct: 373 gataaagcatcaatataataaaa 395 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 579 gatatattctagatcttcttttttgactatatat 612 ||||||||||||||||||||| |||||||||||| Sbjct: 815 gatatattctagatcttctttcttgactatatat 848
>gb|U62792.1|CNU62792 Chusquea nudiramea ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1034 Score = 319 bits (161), Expect = 6e-84 Identities = 259/293 (88%), Gaps = 7/293 (2%) Strand = Plus / Plus Query: 174 aagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaat 233 ||||| || |||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 404 aagaaataaaaatttgaagcaataataaagagcggcccgggttaataaaactgagaaaat 463 Query: 234 ta--actcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaa 291 | |||||||||||||||||||||||||||| ||| |||||||||||||||||||| || Sbjct: 464 ttttactcggaaagaaattttttggaagctccattgtgggattcagacctaaccattaaa 523 Query: 292 ggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcct 351 ||||||| ||||||||||||||||||||||| | ||||||||||| |||||||||||||| Sbjct: 524 ggagaagtagtgggaacgacagaacctatgactgcataggatttttttgaaaagaatcct 583 Query: 352 aacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt- 410 || |||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 584 aatacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggtt 643 Query: 411 ----tataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 459 |||||||| |||| ||||||||| ||||||| | ||||||||||||||| Sbjct: 644 ataatataaattgacaattaagacaggcaagagtatacattcgcccgcgaaat 696 Score = 198 bits (100), Expect = 2e-47 Identities = 140/152 (92%), Gaps = 1/152 (0%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||| Sbjct: 244 agcaaaactaaagggatgtggataaaaggagggatgatagaaagaaagaagaggaa-taa 302 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| | |||||||||||||| ||||||||||||||||||||||| Sbjct: 303 gaaagatataggattccaatatgtatggtctatgagttacatcataaaaggcaatgtgat 362 Query: 122 aaagcatcaatataataaaactaatagagaat 153 |||||||||||||||||||| ||| ||||||| Sbjct: 363 aaagcatcaatataataaaaataacagagaat 394 Score = 109 bits (55), Expect = 1e-20 Identities = 112/130 (86%), Gaps = 7/130 (5%) Strand = Plus / Plus Query: 487 gattcaataagagtaaaaataaggatatttttt----agaaggactacattattatctat 542 ||||||||||||||||||||||||| ||||||| |||| || |||||||| |||| Sbjct: 701 gattcaataagagtaaaaataaggagatttttttttaagaaagattacattat---ctat 757 Query: 543 aaatatagaatttagataaatatccacacacatctggatatattctagatcttctttttt 602 ||||||| ||| |||||||| ||||||||||| ||||||||||||||||||||| || Sbjct: 758 aaatatataatacggataaatagacacacacatctagatatattctagatcttctttctt 817 Query: 603 gactatatat 612 |||||||||| Sbjct: 818 gactatatat 827
>gb|AY847101.1| Orthoclada laxa ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1068 Score = 301 bits (152), Expect = 1e-78 Identities = 278/322 (86%), Gaps = 4/322 (1%) Strand = Plus / Plus Query: 157 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 216 |||| ||| ||||||| || || | ||||||| ||||||||| ||||||| ||||||||| Sbjct: 395 aaatcgtaccttgaaacaataaatccaaatttaaagcaataaaaaagagcagcccgggtt 454 Query: 217 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 276 ||||||||||||||||| ||||||||||||||||||||||||||| |||| | ||||| Sbjct: 455 aataaaactgagaaaatgggctcggaaagaaattttttggaagctccattgcagaattca 514 Query: 277 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccatagg----a 332 |||||||||| |||||||||| |||||||||||| ||||||||| | ||||| | Sbjct: 515 atcctaaccattaaaggagaagctgtgggaacgacaaaacctatgactggataggattta 574 Query: 333 ttttattgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnt 392 ||||||||||||||||||||| | |||||||||||||||||||||||||||| | Sbjct: 575 ttttattgaaaagaatcctaatatttcattgggtgggatggcggaacaaaccaaaaaaat 634 Query: 393 tgtcttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgccc 452 | |||||||||||| |||||||||||||||||||||||||||||||||| |||||||| Sbjct: 635 ggctttatttggtaaggttataaattaacaaataagacaggaaagagtaaacattcgccc 694 Query: 453 gcgaaattcttattgaattaga 474 ||||||| |||||| |||||| Sbjct: 695 gcgaaatctttattggattaga 716 Score = 153 bits (77), Expect = 8e-34 Identities = 114/125 (91%), Gaps = 1/125 (0%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||||||||||| ||||||||||||| |||||||||| || ||| Sbjct: 234 agcaaaactaaagggatgtggataaaaggagggatgataggtagaaggaagaagat-taa 292 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| ||||||||| ||||||||||||||||||||||||||||||| Sbjct: 293 gaaagatataggattccaatgtgtatgggctatgaattacatcataaaaggcaatgtgaa 352 Query: 122 aaagc 126 ||||| Sbjct: 353 aaagc 357
>gb|AY847111.1| Zeugites sagittatus ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1018 Score = 281 bits (142), Expect = 1e-72 Identities = 214/238 (89%) Strand = Plus / Plus Query: 147 agagaatgaaaaattgtaacttgaaagaagaactacaaattttaagcaataataaagagc 206 ||||||| | |||| ||||||||||| || || | ||||| ||||||||| ||||||| Sbjct: 333 agagaattagaaatcgtaacttgaaacaataaaaaaaaattgcaagcaataaaaaagagc 392 Query: 207 cgcccgggttaataaaactgagaaaattaactcggaaagaaattttttggaagctccgtt 266 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || Sbjct: 393 agcccgggttaataaaactgagaaaattgactcggaaagaaattttttggaagctccatt 452 Query: 267 gcgggattcagacctaaccattcaaggagaagcagtgggaacgacagaacctatgattcc 326 || ||||||| ||||||||||| |||||||||| |||||||||||| ||||||||| | Sbjct: 453 gcaggattcaaacctaaccattaaaggagaagctgtgggaacgacaaaacctatgactgg 512 Query: 327 ataggattttattgaaaagaatcctaacacttcattgggtgggatggcggaacaaacc 384 ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct: 513 ataggattttattgaaaagaatcctaatacttcattgggggggatggcggaacaaacc 570 Score = 182 bits (92), Expect = 9e-43 Identities = 126/136 (92%), Gaps = 1/136 (0%) Strand = Plus / Plus Query: 6 aaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataaataa 65 |||||||||||||||||||||| ||||||||||||| |||||||| | ||| |||| || Sbjct: 184 aaactaaagggatgtggataaaaggagggatgataggtagaaggaaaaagaa-taaaaaa 242 Query: 66 gatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaaaaag 125 ||||||| |||||| |||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 243 gatataggattccaatgtgtatggtctatgaattacatcataaaaggcaatgtgataaag 302 Query: 126 catcaatataataaaa 141 |||||||||||||||| Sbjct: 303 catcaatataataaaa 318 Score = 107 bits (54), Expect = 4e-20 Identities = 72/78 (92%) Strand = Plus / Plus Query: 397 ttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgcccgcga 456 |||||||||||| |||||||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 582 ttatttggtaaggttataaattaccaaataagacaggaaagagtaaacattcgcccgcga 641 Query: 457 aattcttattgaattaga 474 ||| |||||| |||||| Sbjct: 642 aatctttattggattaga 659
>gb|AY847102.1| Lophatherum gracile ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1078 Score = 281 bits (142), Expect = 1e-72 Identities = 214/238 (89%) Strand = Plus / Plus Query: 147 agagaatgaaaaattgtaacttgaaagaagaactacaaattttaagcaataataaagagc 206 ||||||| | |||| ||||||||||| || || | ||||| ||||||||| ||||||| Sbjct: 393 agagaattagaaatcgtaacttgaaacaataaaaaaaaattgcaagcaataaaaaagagc 452 Query: 207 cgcccgggttaataaaactgagaaaattaactcggaaagaaattttttggaagctccgtt 266 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || Sbjct: 453 agcccgggttaataaaactgagaaaattgactcggaaagaaattttttggaagctccatt 512 Query: 267 gcgggattcagacctaaccattcaaggagaagcagtgggaacgacagaacctatgattcc 326 || ||||||| ||||||||||| |||||||||| |||||||||||| ||||||||| | Sbjct: 513 gcaggattcaaacctaaccattaaaggagaagctgtgggaacgacaaaacctatgactgg 572 Query: 327 ataggattttattgaaaagaatcctaacacttcattgggtgggatggcggaacaaacc 384 ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct: 573 ataggattttattgaaaagaatcctaatacttcattgggggggatggcggaacaaacc 630 Score = 182 bits (92), Expect = 9e-43 Identities = 126/136 (92%), Gaps = 1/136 (0%) Strand = Plus / Plus Query: 6 aaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataaataa 65 |||||||||||||||||||||| ||||||||||||| |||||||| | ||| |||| || Sbjct: 244 aaactaaagggatgtggataaaaggagggatgataggtagaaggaaaaagaa-taaaaaa 302 Query: 66 gatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaaaaag 125 ||||||| |||||| |||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 303 gatataggattccaatgtgtatggtctatgaattacatcataaaaggcaatgtgataaag 362 Query: 126 catcaatataataaaa 141 |||||||||||||||| Sbjct: 363 catcaatataataaaa 378 Score = 107 bits (54), Expect = 4e-20 Identities = 72/78 (92%) Strand = Plus / Plus Query: 397 ttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgcccgcga 456 |||||||||||| |||||||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 642 ttatttggtaaggttataaattaccaaataagacaggaaagagtaaacattcgcccgcga 701 Query: 457 aattcttattgaattaga 474 ||| |||||| |||||| Sbjct: 702 aatctttattggattaga 719
>gb|AY847113.1| Micraira lazaridis ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 757 Score = 278 bits (140), Expect = 2e-71 Identities = 214/238 (89%), Gaps = 2/238 (0%) Strand = Plus / Plus Query: 190 aagcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaat 249 ||||| |||||||||| ||||||||||||||||||||||||||| ||||||||| |||| Sbjct: 90 aagcattaataaagagtagcccgggttaataaaactgagaaaattgactcggaaataaat 149 Query: 250 tttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacg 309 |||||||||||||| |||| ||||||| ||||||||||| |||||||||| ||||||||| Sbjct: 150 tttttggaagctccattgcaggattcaaacctaaccattaaaggagaagctgtgggaacg 209 Query: 310 acagaacctatgattccataggattttattgaaaagaatcctaacacttcattgggtggg 369 ||| ||||||||| | |||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 210 acaaaacctatgactgcataggattttattgaaaagaatcctaatacttcattgggtggg 269 Query: 370 atggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaataa 427 ||||||||||||||| ||| |||||||||||| |||||||||||||||||| Sbjct: 270 atggcggaacaaacc-aaaaaattgctttatttggtaag-ttataaattaacaaataa 325 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 577 tggatatattctagatcttcttttttgactatatat 612 ||||||||||||||||||||||| || ||||||||| Sbjct: 418 tggatatattctagatcttctttctttactatatat 453 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 106 taaaaggcaatgtgaaaaagcatcaatataataaaa 141 ||||||||||||||| |||||||||||||| ||||| Sbjct: 1 taaaaggcaatgtgataaagcatcaatatattaaaa 36 Score = 52.0 bits (26), Expect = 0.002 Identities = 49/54 (90%), Gaps = 2/54 (3%) Strand = Plus / Plus Query: 463 tattgaattagaatactttaccgcgattcaata-agagtaaaaataaggatatt 515 ||||| |||||||||||||||| ||||| |||| ||||||||||||||| |||| Sbjct: 326 tattgtattagaatactttaccacgatt-aatatagagtaaaaataagggtatt 378
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 272 bits (137), Expect = 1e-69 Identities = 271/309 (87%), Gaps = 9/309 (2%) Strand = Plus / Minus Query: 197 aataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaattttttgg 256 |||||||||| ||| ||||||||||||||||||||||| ||||||||| ||| || || Sbjct: 80530 aataaagagcagcc-gggttaataaaactgagaaaattgactcggaaaaaaaaatt--gg 80474 Query: 257 aagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgacagaac 316 ||||||| |||| ||||||| ||||||||||| |||||||||| |||||||||||| ||| Sbjct: 80473 aagctccattgcaggattcaaacctaaccattaaaggagaagctgtgggaacgacaaaac 80414 Query: 317 ctatgattccataggattttattgaaaagaatcctaacacttcattgggtgggatggcgg 376 |||||| | ||||||| ||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 80413 ctatgactacatagga-tttattg-aaagaatcctaacacttcattgg--tggatggcgg 80358 Query: 377 aacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaataagacaggaaa 436 ||||||| ||| ||||||| |||| || |||||||||||||||||||||||| Sbjct: 80357 -acaaacc-acaaaattgctttatttgataaggttctaaattaacaaataagacaggaaa 80300 Query: 437 gagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataa 496 ||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||||||| Sbjct: 80299 gagtaaatattcgcccgcgaaatccttattggattagaatactttaccacgattcaataa 80240 Query: 497 gagtaaaaa 505 || |||||| Sbjct: 80239 gaataaaaa 80231 Score = 125 bits (63), Expect = 2e-25 Identities = 126/144 (87%), Gaps = 6/144 (4%) Strand = Plus / Minus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 ||||||||||||||| ||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 80741 agcaaaactaaagggtagtggataaaaggagggatgatagatagaaggaagaag-aataa 80683 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcat----aaaaggcaatg 117 ||||||||| ||||| | ||||||||||||||||| |||||| ||||||||||| Sbjct: 80682 gaaagatataggattcccatatgtatggtctatgaatt-catcataaaaaaaaggcaatg 80624 Query: 118 tgaaaaagcatcaatataataaaa 141 ||| |||||||||||||||||||| Sbjct: 80623 tgataaagcatcaatataataaaa 80600 Score = 63.9 bits (32), Expect = 6e-07 Identities = 35/36 (97%) Strand = Plus / Minus Query: 577 tggatatattctagatcttcttttttgactatatat 612 ||||||||||||||||||||||| |||||||||||| Sbjct: 80179 tggatatattctagatcttctttcttgactatatat 80144
>gb|M15176.1|MZECPPG Zea mays chloroplast Eco x DNA Length = 1368 Score = 272 bits (137), Expect = 1e-69 Identities = 271/309 (87%), Gaps = 9/309 (2%) Strand = Plus / Plus Query: 197 aataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaattttttgg 256 |||||||||| ||| ||||||||||||||||||||||| ||||||||| ||| || || Sbjct: 47 aataaagagcagcc-gggttaataaaactgagaaaattgactcggaaaaaaaaatt--gg 103 Query: 257 aagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgacagaac 316 ||||||| |||| ||||||| ||||||||||| |||||||||| |||||||||||| ||| Sbjct: 104 aagctccattgcaggattcaaacctaaccattaaaggagaagctgtgggaacgacaaaac 163 Query: 317 ctatgattccataggattttattgaaaagaatcctaacacttcattgggtgggatggcgg 376 |||||| | |||||||||| ||||||| |||||||||||||||||||| ||||||||| Sbjct: 164 ctatgactacataggattt-attgaaa-gaatcctaacacttcattggt--ggatggcgg 219 Query: 377 aacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaataagacaggaaa 436 | |||||| ||| ||||||| |||| || |||||||||||||||||||||||| Sbjct: 220 a-caaaccacaaaa-ttgctttatttgataaggttctaaattaacaaataagacaggaaa 277 Query: 437 gagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataa 496 ||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||||||| Sbjct: 278 gagtaaatattcgcccgcgaaatccttattggattagaatactttaccacgattcaataa 337 Query: 497 gagtaaaaa 505 || |||||| Sbjct: 338 gaataaaaa 346 Score = 63.9 bits (32), Expect = 6e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 577 tggatatattctagatcttcttttttgactatatat 612 ||||||||||||||||||||||| |||||||||||| Sbjct: 398 tggatatattctagatcttctttcttgactatatat 433
>gb|AY847097.1| Chasmanthium curvifolium ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 982 Score = 270 bits (136), Expect = 5e-69 Identities = 210/237 (88%) Strand = Plus / Plus Query: 190 aagcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaat 249 ||||||||| ||||||| ||| ||||||||||||||||||||||| |||||||||||||| Sbjct: 424 aagcaataaaaaagagcagcctgggttaataaaactgagaaaattgactcggaaagaaat 483 Query: 250 tttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacg 309 |||||||||||||| |||| ||||||| |||||||||| |||||||||| ||||||||| Sbjct: 484 tttttggaagctccattgcaggattcaaacctaaccatgaaaggagaagctgtgggaacg 543 Query: 310 acagaacctatgattccataggattttattgaaaagaatcctaacacttcattgggtggg 369 | | ||||||||| | |||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 544 agaaaacctatgactgcataggattttattgaaaagaatcctaatacttcattgggtggg 603 Query: 370 atggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaata 426 |||||||||||| || ||| ||||||||| || ||||||||||||||||| Sbjct: 604 atggcggaacaagccaaaaaaattgctttatttggttaggttataaattaacaaata 660 Score = 190 bits (96), Expect = 4e-45 Identities = 130/140 (92%), Gaps = 1/140 (0%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 |||||||||||||||||| ||||||| |||||||||||||| |||||||||| ||| ||| Sbjct: 231 agcaaaactaaagggatggggataaaaggagggatgatagatagaaggaagaagaa-taa 289 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 290 gaaagatataggattccaatgtgtatggtctatgaattacatcataaaaggcaatgtgat 349 Query: 122 aaagcatcaatataataaaa 141 |||||||||||||||||||| Sbjct: 350 aaagcatcaatataataaaa 369 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 577 tggatatattctagatcttcttttttgactat 608 ||||||||||||||||||||||| |||||||| Sbjct: 719 tggatatattctagatcttctttcttgactat 750
>dbj|AP007101.1| Saccharum spontaneum chloroplast gene for ribosomal protein L16, partial cds, strain: SES205A, clone: SSE-79kb Length = 671 Score = 264 bits (133), Expect = 3e-67 Identities = 186/201 (92%), Gaps = 2/201 (0%) Strand = Plus / Minus Query: 181 acaaattttaagcaataa-taaagagccgcccgggttaataaaactgagaaaattaactc 239 |||||| | ||||||||| |||||||| ||| ||||||||||||||||||||||| |||| Sbjct: 200 acaaatataaagcaataaataaagagcagcc-gggttaataaaactgagaaaattgactc 142 Query: 240 ggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagc 299 |||||||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||| Sbjct: 141 ggaaagaaattttttggaagctccattgcaggattcaaacctaaccattaaaggagaagc 82 Query: 300 agtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttc 359 |||||||||||| ||||||||| | ||||||||||||||| |||||||||||||||||| Sbjct: 81 tgtgggaacgacaaaacctatgactacataggattttattggaaagaatcctaacacttc 22 Query: 360 attgggtgggatggcggaaca 380 ||||||||||||||||||||| Sbjct: 21 attgggtgggatggcggaaca 1 Score = 149 bits (75), Expect = 1e-32 Identities = 128/144 (88%), Gaps = 5/144 (3%) Strand = Plus / Minus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 ||||||||||||||||| |||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 402 agcaaaactaaagggatctggataaaaggagggatgatagatagaaggaagaag-aataa 344 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcat----aaaaggcaatg 117 ||||||||| ||||| |||||||||| ||||||||||||||| ||||||||||| Sbjct: 343 gaaagatataggattcccatgtgtatggtttatgaattacatcataaaaaaaaggcaatg 284 Query: 118 tgaaaaagcatcaatataataaaa 141 ||| |||||||||||||||||||| Sbjct: 283 tgataaagcatcaatataataaaa 260
>dbj|AP007100.1| Saccharum spontaneum chloroplast gene for ribosomal protein L16, partial cds, strain: Jw385, clone: SJw-79kb Length = 672 Score = 264 bits (133), Expect = 3e-67 Identities = 186/201 (92%), Gaps = 2/201 (0%) Strand = Plus / Minus Query: 181 acaaattttaagcaataa-taaagagccgcccgggttaataaaactgagaaaattaactc 239 |||||| | ||||||||| |||||||| ||| ||||||||||||||||||||||| |||| Sbjct: 200 acaaatataaagcaataaataaagagcagcc-gggttaataaaactgagaaaattgactc 142 Query: 240 ggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagc 299 |||||||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||| Sbjct: 141 ggaaagaaattttttggaagctccattgcaggattcaaacctaaccattaaaggagaagc 82 Query: 300 agtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttc 359 |||||||||||| ||||||||| | ||||||||||||||| |||||||||||||||||| Sbjct: 81 tgtgggaacgacaaaacctatgactacataggattttattggaaagaatcctaacacttc 22 Query: 360 attgggtgggatggcggaaca 380 ||||||||||||||||||||| Sbjct: 21 attgggtgggatggcggaaca 1 Score = 149 bits (75), Expect = 1e-32 Identities = 128/144 (88%), Gaps = 5/144 (3%) Strand = Plus / Minus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 ||||||||||||||||| |||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 402 agcaaaactaaagggatctggataaaaggagggatgatagatagaaggaagaag-aataa 344 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcat----aaaaggcaatg 117 ||||||||| ||||| |||||||||| ||||||||||||||| ||||||||||| Sbjct: 343 gaaagatataggattcccatgtgtatggtttatgaattacatcataaaaaaaaggcaatg 284 Query: 118 tgaaaaagcatcaatataataaaa 141 ||| |||||||||||||||||||| Sbjct: 283 tgataaagcatcaatataataaaa 260
>dbj|AP007099.1| Saccharum spontaneum chloroplast gene for ribosomal protein L16, partial cds, strain: Glagah, clone: SGl-79kb Length = 671 Score = 264 bits (133), Expect = 3e-67 Identities = 186/201 (92%), Gaps = 2/201 (0%) Strand = Plus / Minus Query: 181 acaaattttaagcaataa-taaagagccgcccgggttaataaaactgagaaaattaactc 239 |||||| | ||||||||| |||||||| ||| ||||||||||||||||||||||| |||| Sbjct: 200 acaaatataaagcaataaataaagagcagcc-gggttaataaaactgagaaaattgactc 142 Query: 240 ggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagc 299 |||||||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||| Sbjct: 141 ggaaagaaattttttggaagctccattgcaggattcaaacctaaccattaaaggagaagc 82 Query: 300 agtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttc 359 |||||||||||| ||||||||| | ||||||||||||||| |||||||||||||||||| Sbjct: 81 tgtgggaacgacaaaacctatgactacataggattttattggaaagaatcctaacacttc 22 Query: 360 attgggtgggatggcggaaca 380 ||||||||||||||||||||| Sbjct: 21 attgggtgggatggcggaaca 1 Score = 149 bits (75), Expect = 1e-32 Identities = 128/144 (88%), Gaps = 5/144 (3%) Strand = Plus / Minus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 ||||||||||||||||| |||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 402 agcaaaactaaagggatctggataaaaggagggatgatagatagaaggaagaag-aataa 344 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcat----aaaaggcaatg 117 ||||||||| ||||| |||||||||| ||||||||||||||| ||||||||||| Sbjct: 343 gaaagatataggattcccatgtgtatggtttatgaattacatcataaaaaaaaggcaatg 284 Query: 118 tgaaaaagcatcaatataataaaa 141 ||| |||||||||||||||||||| Sbjct: 283 tgataaagcatcaatataataaaa 260
>dbj|AP007098.1| Saccharum edule chloroplast gene for ribosomal protein L16, partial cds, strain: COL/PAPUA N.G/TARC/E12, clone: EPN-79kb Length = 666 Score = 264 bits (133), Expect = 3e-67 Identities = 186/201 (92%), Gaps = 2/201 (0%) Strand = Plus / Minus Query: 181 acaaattttaagcaataa-taaagagccgcccgggttaataaaactgagaaaattaactc 239 |||||| | ||||||||| |||||||| ||| ||||||||||||||||||||||| |||| Sbjct: 200 acaaatataaagcaataaataaagagcagcc-gggttaataaaactgagaaaattgactc 142 Query: 240 ggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagc 299 |||||||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||| Sbjct: 141 ggaaagaaattttttggaagctccattgcaggattcaaacctaaccattaaaggagaagc 82 Query: 300 agtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttc 359 |||||||||||| ||||||||| | ||||||||||||||| |||||||||||||||||| Sbjct: 81 tgtgggaacgacaaaacctatgactacataggattttattggaaagaatcctaacacttc 22 Query: 360 attgggtgggatggcggaaca 380 ||||||||||||||||||||| Sbjct: 21 attgggtgggatggcggaaca 1 Score = 149 bits (75), Expect = 1e-32 Identities = 128/144 (88%), Gaps = 5/144 (3%) Strand = Plus / Minus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 ||||||||||||||||| |||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 397 agcaaaactaaagggatctggataaaaggagggatgatagatagaaggaagaag-aataa 339 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcat----aaaaggcaatg 117 ||||||||| ||||| |||||||||| ||||||||||||||| ||||||||||| Sbjct: 338 gaaagatataggattcccatgtgtatggtttatgaattacatcataaaaaaaaggcaatg 279 Query: 118 tgaaaaagcatcaatataataaaa 141 ||| |||||||||||||||||||| Sbjct: 278 tgataaagcatcaatataataaaa 255
>dbj|AP007097.1| Saccharum edule chloroplast gene for ribosomal protein L16, partial cds, strain: IN95-009, clone: EIN-79kb Length = 666 Score = 264 bits (133), Expect = 3e-67 Identities = 186/201 (92%), Gaps = 2/201 (0%) Strand = Plus / Minus Query: 181 acaaattttaagcaataa-taaagagccgcccgggttaataaaactgagaaaattaactc 239 |||||| | ||||||||| |||||||| ||| ||||||||||||||||||||||| |||| Sbjct: 200 acaaatataaagcaataaataaagagcagcc-gggttaataaaactgagaaaattgactc 142 Query: 240 ggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagc 299 |||||||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||| Sbjct: 141 ggaaagaaattttttggaagctccattgcaggattcaaacctaaccattaaaggagaagc 82 Query: 300 agtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttc 359 |||||||||||| ||||||||| | ||||||||||||||| |||||||||||||||||| Sbjct: 81 tgtgggaacgacaaaacctatgactacataggattttattggaaagaatcctaacacttc 22 Query: 360 attgggtgggatggcggaaca 380 ||||||||||||||||||||| Sbjct: 21 attgggtgggatggcggaaca 1 Score = 149 bits (75), Expect = 1e-32 Identities = 128/144 (88%), Gaps = 5/144 (3%) Strand = Plus / Minus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 ||||||||||||||||| |||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 397 agcaaaactaaagggatctggataaaaggagggatgatagatagaaggaagaag-aataa 339 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcat----aaaaggcaatg 117 ||||||||| ||||| |||||||||| ||||||||||||||| ||||||||||| Sbjct: 338 gaaagatataggattcccatgtgtatggtttatgaattacatcataaaaaaaaggcaatg 279 Query: 118 tgaaaaagcatcaatataataaaa 141 ||| |||||||||||||||||||| Sbjct: 278 tgataaagcatcaatataataaaa 255
>dbj|AP007096.1| Saccharum sinense chloroplast gene for ribosomal protein L16, partial cds, strain: Ooshima, clone: SiO-79kb Length = 666 Score = 264 bits (133), Expect = 3e-67 Identities = 186/201 (92%), Gaps = 2/201 (0%) Strand = Plus / Minus Query: 181 acaaattttaagcaataa-taaagagccgcccgggttaataaaactgagaaaattaactc 239 |||||| | ||||||||| |||||||| ||| ||||||||||||||||||||||| |||| Sbjct: 200 acaaatataaagcaataaataaagagcagcc-gggttaataaaactgagaaaattgactc 142 Query: 240 ggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagc 299 |||||||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||| Sbjct: 141 ggaaagaaattttttggaagctccattgcaggattcaaacctaaccattaaaggagaagc 82 Query: 300 agtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttc 359 |||||||||||| ||||||||| | ||||||||||||||| |||||||||||||||||| Sbjct: 81 tgtgggaacgacaaaacctatgactacataggattttattggaaagaatcctaacacttc 22 Query: 360 attgggtgggatggcggaaca 380 ||||||||||||||||||||| Sbjct: 21 attgggtgggatggcggaaca 1 Score = 149 bits (75), Expect = 1e-32 Identities = 128/144 (88%), Gaps = 5/144 (3%) Strand = Plus / Minus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 ||||||||||||||||| |||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 397 agcaaaactaaagggatctggataaaaggagggatgatagatagaaggaagaag-aataa 339 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcat----aaaaggcaatg 117 ||||||||| ||||| |||||||||| ||||||||||||||| ||||||||||| Sbjct: 338 gaaagatataggattcccatgtgtatggtttatgaattacatcataaaaaaaaggcaatg 279 Query: 118 tgaaaaagcatcaatataataaaa 141 ||| |||||||||||||||||||| Sbjct: 278 tgataaagcatcaatataataaaa 255
>dbj|AP007095.1| Saccharum barberi chloroplast gene for ribosomal protein L16, partial cds, strain: Chunnee, clone: BCh-79kb Length = 666 Score = 264 bits (133), Expect = 3e-67 Identities = 186/201 (92%), Gaps = 2/201 (0%) Strand = Plus / Minus Query: 181 acaaattttaagcaataa-taaagagccgcccgggttaataaaactgagaaaattaactc 239 |||||| | ||||||||| |||||||| ||| ||||||||||||||||||||||| |||| Sbjct: 200 acaaatataaagcaataaataaagagcagcc-gggttaataaaactgagaaaattgactc 142 Query: 240 ggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagc 299 |||||||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||| Sbjct: 141 ggaaagaaattttttggaagctccattgcaggattcaaacctaaccattaaaggagaagc 82 Query: 300 agtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttc 359 |||||||||||| ||||||||| | ||||||||||||||| |||||||||||||||||| Sbjct: 81 tgtgggaacgacaaaacctatgactacataggattttattggaaagaatcctaacacttc 22 Query: 360 attgggtgggatggcggaaca 380 ||||||||||||||||||||| Sbjct: 21 attgggtgggatggcggaaca 1 Score = 149 bits (75), Expect = 1e-32 Identities = 128/144 (88%), Gaps = 5/144 (3%) Strand = Plus / Minus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 ||||||||||||||||| |||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 397 agcaaaactaaagggatctggataaaaggagggatgatagatagaaggaagaag-aataa 339 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcat----aaaaggcaatg 117 ||||||||| ||||| |||||||||| ||||||||||||||| ||||||||||| Sbjct: 338 gaaagatataggattcccatgtgtatggtttatgaattacatcataaaaaaaaggcaatg 279 Query: 118 tgaaaaagcatcaatataataaaa 141 ||| |||||||||||||||||||| Sbjct: 278 tgataaagcatcaatataataaaa 255
>dbj|AP007094.1| Saccharum sinense chloroplast gene for ribosomal protein L16, partial cds, strain: Tekcha, clone: SiTe-79kb Length = 666 Score = 264 bits (133), Expect = 3e-67 Identities = 186/201 (92%), Gaps = 2/201 (0%) Strand = Plus / Minus Query: 181 acaaattttaagcaataa-taaagagccgcccgggttaataaaactgagaaaattaactc 239 |||||| | ||||||||| |||||||| ||| ||||||||||||||||||||||| |||| Sbjct: 200 acaaatataaagcaataaataaagagcagcc-gggttaataaaactgagaaaattgactc 142 Query: 240 ggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagc 299 |||||||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||| Sbjct: 141 ggaaagaaattttttggaagctccattgcaggattcaaacctaaccattaaaggagaagc 82 Query: 300 agtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttc 359 |||||||||||| ||||||||| | ||||||||||||||| |||||||||||||||||| Sbjct: 81 tgtgggaacgacaaaacctatgactacataggattttattggaaagaatcctaacacttc 22 Query: 360 attgggtgggatggcggaaca 380 ||||||||||||||||||||| Sbjct: 21 attgggtgggatggcggaaca 1 Score = 149 bits (75), Expect = 1e-32 Identities = 128/144 (88%), Gaps = 5/144 (3%) Strand = Plus / Minus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 ||||||||||||||||| |||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 397 agcaaaactaaagggatctggataaaaggagggatgatagatagaaggaagaag-aataa 339 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcat----aaaaggcaatg 117 ||||||||| ||||| |||||||||| ||||||||||||||| ||||||||||| Sbjct: 338 gaaagatataggattcccatgtgtatggtttatgaattacatcataaaaaaaaggcaatg 279 Query: 118 tgaaaaagcatcaatataataaaa 141 ||| |||||||||||||||||||| Sbjct: 278 tgataaagcatcaatataataaaa 255
>dbj|AP007093.1| Saccharum barberi chloroplast gene for ribosomal protein L16, partial cds, strain: Kewali14, clone: BKe-79kb Length = 666 Score = 264 bits (133), Expect = 3e-67 Identities = 186/201 (92%), Gaps = 2/201 (0%) Strand = Plus / Minus Query: 181 acaaattttaagcaataa-taaagagccgcccgggttaataaaactgagaaaattaactc 239 |||||| | ||||||||| |||||||| ||| ||||||||||||||||||||||| |||| Sbjct: 200 acaaatataaagcaataaataaagagcagcc-gggttaataaaactgagaaaattgactc 142 Query: 240 ggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagc 299 |||||||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||| Sbjct: 141 ggaaagaaattttttggaagctccattgcaggattcaaacctaaccattaaaggagaagc 82 Query: 300 agtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttc 359 |||||||||||| ||||||||| | ||||||||||||||| |||||||||||||||||| Sbjct: 81 tgtgggaacgacaaaacctatgactacataggattttattggaaagaatcctaacacttc 22 Query: 360 attgggtgggatggcggaaca 380 ||||||||||||||||||||| Sbjct: 21 attgggtgggatggcggaaca 1 Score = 149 bits (75), Expect = 1e-32 Identities = 128/144 (88%), Gaps = 5/144 (3%) Strand = Plus / Minus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 ||||||||||||||||| |||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 397 agcaaaactaaagggatctggataaaaggagggatgatagatagaaggaagaag-aataa 339 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcat----aaaaggcaatg 117 ||||||||| ||||| |||||||||| ||||||||||||||| ||||||||||| Sbjct: 338 gaaagatataggattcccatgtgtatggtttatgaattacatcataaaaaaaaggcaatg 279 Query: 118 tgaaaaagcatcaatataataaaa 141 ||| |||||||||||||||||||| Sbjct: 278 tgataaagcatcaatataataaaa 255
>dbj|AP007092.1| Saccharum robustum chloroplast gene for ribosomal protein L16, exon 2, partial sequence Length = 666 Score = 264 bits (133), Expect = 3e-67 Identities = 186/201 (92%), Gaps = 2/201 (0%) Strand = Plus / Minus Query: 181 acaaattttaagcaataa-taaagagccgcccgggttaataaaactgagaaaattaactc 239 |||||| | ||||||||| |||||||| ||| ||||||||||||||||||||||| |||| Sbjct: 200 acaaatataaagcaataaataaagagcagcc-gggttaataaaactgagaaaattgactc 142 Query: 240 ggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagc 299 |||||||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||| Sbjct: 141 ggaaagaaattttttggaagctccattgcaggattcaaacctaaccattaaaggagaagc 82 Query: 300 agtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttc 359 |||||||||||| ||||||||| | ||||||||||||||| |||||||||||||||||| Sbjct: 81 tgtgggaacgacaaaacctatgactacataggattttattggaaagaatcctaacacttc 22 Query: 360 attgggtgggatggcggaaca 380 ||||||||||||||||||||| Sbjct: 21 attgggtgggatggcggaaca 1 Score = 149 bits (75), Expect = 1e-32 Identities = 128/144 (88%), Gaps = 5/144 (3%) Strand = Plus / Minus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 ||||||||||||||||| |||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 397 agcaaaactaaagggatctggataaaaggagggatgatagatagaaggaagaag-aataa 339 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcat----aaaaggcaatg 117 ||||||||| ||||| |||||||||| ||||||||||||||| ||||||||||| Sbjct: 338 gaaagatataggattcccatgtgtatggtttatgaattacatcataaaaaaaaggcaatg 279 Query: 118 tgaaaaagcatcaatataataaaa 141 ||| |||||||||||||||||||| Sbjct: 278 tgataaagcatcaatataataaaa 255
>dbj|AP007091.1| Saccharum robustum chloroplast gene for ribosomal protein L16, partial cds, strain: 6, clone: R6-79kb Length = 666 Score = 264 bits (133), Expect = 3e-67 Identities = 186/201 (92%), Gaps = 2/201 (0%) Strand = Plus / Minus Query: 181 acaaattttaagcaataa-taaagagccgcccgggttaataaaactgagaaaattaactc 239 |||||| | ||||||||| |||||||| ||| ||||||||||||||||||||||| |||| Sbjct: 200 acaaatataaagcaataaataaagagcagcc-gggttaataaaactgagaaaattgactc 142 Query: 240 ggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagc 299 |||||||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||| Sbjct: 141 ggaaagaaattttttggaagctccattgcaggattcaaacctaaccattaaaggagaagc 82 Query: 300 agtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttc 359 |||||||||||| ||||||||| | ||||||||||||||| |||||||||||||||||| Sbjct: 81 tgtgggaacgacaaaacctatgactacataggattttattggaaagaatcctaacacttc 22 Query: 360 attgggtgggatggcggaaca 380 ||||||||||||||||||||| Sbjct: 21 attgggtgggatggcggaaca 1 Score = 149 bits (75), Expect = 1e-32 Identities = 128/144 (88%), Gaps = 5/144 (3%) Strand = Plus / Minus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 ||||||||||||||||| |||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 397 agcaaaactaaagggatctggataaaaggagggatgatagatagaaggaagaag-aataa 339 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcat----aaaaggcaatg 117 ||||||||| ||||| |||||||||| ||||||||||||||| ||||||||||| Sbjct: 338 gaaagatataggattcccatgtgtatggtttatgaattacatcataaaaaaaaggcaatg 279 Query: 118 tgaaaaagcatcaatataataaaa 141 ||| |||||||||||||||||||| Sbjct: 278 tgataaagcatcaatataataaaa 255
>dbj|AP007090.1| Saccharum officinarum chloroplast gene for ribosomal protein L16, partial cds, strain: Fiji40, clone: OFi-79kb Length = 665 Score = 264 bits (133), Expect = 3e-67 Identities = 186/201 (92%), Gaps = 2/201 (0%) Strand = Plus / Minus Query: 181 acaaattttaagcaataa-taaagagccgcccgggttaataaaactgagaaaattaactc 239 |||||| | ||||||||| |||||||| ||| ||||||||||||||||||||||| |||| Sbjct: 200 acaaatataaagcaataaataaagagcagcc-gggttaataaaactgagaaaattgactc 142 Query: 240 ggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagc 299 |||||||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||| Sbjct: 141 ggaaagaaattttttggaagctccattgcaggattcaaacctaaccattaaaggagaagc 82 Query: 300 agtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttc 359 |||||||||||| ||||||||| | ||||||||||||||| |||||||||||||||||| Sbjct: 81 tgtgggaacgacaaaacctatgactacataggattttattggaaagaatcctaacacttc 22 Query: 360 attgggtgggatggcggaaca 380 ||||||||||||||||||||| Sbjct: 21 attgggtgggatggcggaaca 1 Score = 149 bits (75), Expect = 1e-32 Identities = 128/144 (88%), Gaps = 5/144 (3%) Strand = Plus / Minus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 ||||||||||||||||| |||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 396 agcaaaactaaagggatctggataaaaggagggatgatagatagaaggaagaag-aataa 338 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcat----aaaaggcaatg 117 ||||||||| ||||| |||||||||| ||||||||||||||| ||||||||||| Sbjct: 337 gaaagatataggattcccatgtgtatggtttatgaattacatcataaaaaaaaggcaatg 278 Query: 118 tgaaaaagcatcaatataataaaa 141 ||| |||||||||||||||||||| Sbjct: 277 tgataaagcatcaatataataaaa 254
>dbj|AP007089.1| Saccharum officinarum chloroplast gene for ribosomal protein L16, partial cds, strain: Badila, clone: OBa-79kb Length = 665 Score = 264 bits (133), Expect = 3e-67 Identities = 186/201 (92%), Gaps = 2/201 (0%) Strand = Plus / Minus Query: 181 acaaattttaagcaataa-taaagagccgcccgggttaataaaactgagaaaattaactc 239 |||||| | ||||||||| |||||||| ||| ||||||||||||||||||||||| |||| Sbjct: 200 acaaatataaagcaataaataaagagcagcc-gggttaataaaactgagaaaattgactc 142 Query: 240 ggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagc 299 |||||||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||| Sbjct: 141 ggaaagaaattttttggaagctccattgcaggattcaaacctaaccattaaaggagaagc 82 Query: 300 agtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttc 359 |||||||||||| ||||||||| | ||||||||||||||| |||||||||||||||||| Sbjct: 81 tgtgggaacgacaaaacctatgactacataggattttattggaaagaatcctaacacttc 22 Query: 360 attgggtgggatggcggaaca 380 ||||||||||||||||||||| Sbjct: 21 attgggtgggatggcggaaca 1 Score = 149 bits (75), Expect = 1e-32 Identities = 128/144 (88%), Gaps = 5/144 (3%) Strand = Plus / Minus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 ||||||||||||||||| |||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 396 agcaaaactaaagggatctggataaaaggagggatgatagatagaaggaagaag-aataa 338 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcat----aaaaggcaatg 117 ||||||||| ||||| |||||||||| ||||||||||||||| ||||||||||| Sbjct: 337 gaaagatataggattcccatgtgtatggtttatgaattacatcataaaaaaaaggcaatg 278 Query: 118 tgaaaaagcatcaatataataaaa 141 ||| |||||||||||||||||||| Sbjct: 277 tgataaagcatcaatataataaaa 254
>ref|XM_450631.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2141 Score = 188 bits (95), Expect = 1e-44 Identities = 140/155 (90%) Strand = Plus / Plus Query: 230 aaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattc 289 ||||| ||| |||||||||||||||||||||||| ||| | |||| | ||||||||||| Sbjct: 2 aaattgacttggaaagaaattttttggaagctccattgtgagattaaaacctaaccatta 61 Query: 290 aaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatc 349 |||||||||| |||||||||||||||||||||| | |||||||||| |||||||||||| Sbjct: 62 aaggagaagccgtgggaacgacagaacctatgactggataggattttcttgaaaagaatc 121 Query: 350 ctaacacttcattgggtgggatggcggaacaaacc 384 | || |||||||||||||||||||||||||||||| Sbjct: 122 ccaatacttcattgggtgggatggcggaacaaacc 156 Score = 165 bits (83), Expect = 2e-37 Identities = 86/87 (98%) Strand = Plus / Plus Query: 418 taacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaata 477 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 177 taacaaataagacaggaaagagtaaatattcgcccgcgaaatttttattgaattagaata 236 Query: 478 ctttaccgcgattcaataagagtaaaa 504 ||||||||||||||||||||||||||| Sbjct: 237 ctttaccgcgattcaataagagtaaaa 263 Score = 85.7 bits (43), Expect = 2e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 542 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 601 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 296 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 355 Query: 602 tgactatatat 612 ||||||||||| Sbjct: 356 tgactatatat 366
>gb|AF276969.1| Spartina anglica ribosomal protein L16 (rpl16) gene, intron and partial cds; chloroplast gene for chloroplast product Length = 680 Score = 186 bits (94), Expect = 6e-44 Identities = 148/167 (88%), Gaps = 1/167 (0%) Strand = Plus / Plus Query: 331 gattttattgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnn 390 ||||||||||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct: 41 gattttattgaaaagaatcctaatacttcattggg-gggatggcggaacaaaccaaaaaa 99 Query: 391 nttgtcttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgc 450 ||| |||||||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 100 attgctttatttggtaaggttataaattaacaaataagacaagaaagagtaaatattcgc 159 Query: 451 ccgcgaaattcttattgaattagaatactttaccgcgattcaataag 497 ||||||||| |||||| ||||||||||||||| ||||||||||| Sbjct: 160 ccgcgaaatctttattggattagaatactttactatgattcaataag 206 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 487 gattcaataagagtaaaaataaggatatt 515 ||||||||||| |||||||||||||||| Sbjct: 244 gattcaataaggttaaaaataaggatatt 272
>gb|AF276968.1| Spartina alterniflora ribosomal protein L16 (rpl16) gene, intron and partial cds; chloroplast gene for chloroplast product Length = 680 Score = 186 bits (94), Expect = 6e-44 Identities = 148/167 (88%), Gaps = 1/167 (0%) Strand = Plus / Plus Query: 331 gattttattgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnn 390 ||||||||||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct: 41 gattttattgaaaagaatcctaatacttcattggg-gggatggcggaacaaaccaaaaaa 99 Query: 391 nttgtcttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgc 450 ||| |||||||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 100 attgctttatttggtaaggttataaattaacaaataagacaagaaagagtaaatattcgc 159 Query: 451 ccgcgaaattcttattgaattagaatactttaccgcgattcaataag 497 ||||||||| |||||| ||||||||||||||| ||||||||||| Sbjct: 160 ccgcgaaatctttattggattagaatactttactatgattcaataag 206 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 487 gattcaataagagtaaaaataaggatatt 515 ||||||||||| |||||||||||||||| Sbjct: 244 gattcaataaggttaaaaataaggatatt 272
>gb|AF133489.1|AF133489 Anomochloa marantoidea ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1222 Score = 184 bits (93), Expect = 2e-43 Identities = 152/169 (89%), Gaps = 2/169 (1%) Strand = Plus / Plus Query: 218 ataaaactgagaaaattaactcggaaagaaatttt-ttggaagctccgttgcgggattca 276 |||||||||||||||| ||||||||| |||||| ||||||||||| |||| || |||| Sbjct: 464 ataaaactgagaaaatggactcggaaataaatttggttggaagctccattgcagggttca 523 Query: 277 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 336 |||||||||||| | |||||||| ||||||||||||||||| |||| | ||||||||| | Sbjct: 524 gacctaaccattaatggagaagctgtgggaacgacagaacccatgactgcataggattct 583 Query: 337 attgaaaa-gaatcctaacacttcattgggtgggatggcggaacaaacc 384 ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 584 tttgaaaacgaatcctaacacttcattgggtgggatggcggaacaaacc 632 Score = 105 bits (53), Expect = 2e-19 Identities = 117/137 (85%), Gaps = 1/137 (0%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 ||||||| ||||||||||| |||||| ||||||||||||||||||| ||| ||||| ||| Sbjct: 268 agcaaaaataaagggatgtagataaatggagggatgatagaaagaaagaacaggaa-taa 326 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaa 121 || || || |||||| | ||||||||||||||||||||| ||||||||| ||||| Sbjct: 327 gaaaaatcgaggattccaatatgtatggtctatgaattacattctaaaaggcagtgtgat 386 Query: 122 aaagcatcaatataata 138 |||||||| ||| |||| Sbjct: 387 aaagcatccatagaata 403 Score = 65.9 bits (33), Expect = 1e-07 Identities = 79/93 (84%), Gaps = 1/93 (1%) Strand = Plus / Plus Query: 428 gacaggaaagagtaaatattcgcccgcgaaattcttatt-gaattagaatactttaccgc 486 |||||||||||||||||||||||||||||||| ||||| | | | |||||||| || Sbjct: 690 gacaggaaagagtaaatattcgcccgcgaaatctttattatagtaacaatactttcccat 749 Query: 487 gattcaataagagtaaaaataaggatatttttt 519 |||||||||||| |||||| || || ||||||| Sbjct: 750 gattcaataagaataaaaagaaagagatttttt 782 Score = 44.1 bits (22), Expect = 0.53 Identities = 46/53 (86%), Gaps = 2/53 (3%) Strand = Plus / Plus Query: 556 agataaatatccacacacatctggatatattctagatcttcttttttgactat 608 |||||||||| |||||| ||| ||||||||||| |||||||| |||||||| Sbjct: 826 agataaatat--acacacgtctagatatattctatctcttctttcttgactat 876
>gb|AF276970.1| Spartina maritima ribosomal protein L16 (rpl16) gene, intron and partial cds; chloroplast gene for chloroplast product Length = 656 Score = 180 bits (91), Expect = 4e-42 Identities = 136/152 (89%), Gaps = 1/152 (0%) Strand = Plus / Plus Query: 331 gattttattgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnn 390 ||||||||||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct: 41 gattttattgaaaagaatcctaatacttcattggg-gggatggcggaacaaaccaaaaaa 99 Query: 391 nttgtcttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgc 450 ||| |||||||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 100 attgctttatttggtaaggttataaattaacaaataagacaagaaagagtaaatattcgc 159 Query: 451 ccgcgaaattcttattgaattagaatacttta 482 ||||||||| |||||| |||||||||||||| Sbjct: 160 ccgcgaaatctttattggattagaatacttta 191 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 487 gattcaataagagtaaaaataaggatatt 515 ||||||||||| |||||||||||||||| Sbjct: 220 gattcaataaggttaaaaataaggatatt 248
>emb|Y00375.1|CHZMRP16 Maize chloroplast rpl16 gene for ribosomal protein L16 exon 1 Length = 548 Score = 125 bits (63), Expect = 2e-25 Identities = 126/144 (87%), Gaps = 6/144 (4%) Strand = Plus / Plus Query: 2 agcaaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataa 61 ||||||||||||||| ||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 384 agcaaaactaaagggtagtggataaaaggagggatgatagatagaaggaagaag-aataa 442 Query: 62 ataagatatagaattccactgtgtatggtctatgaattacatcat----aaaaggcaatg 117 ||||||||| ||||| | ||||||||||||||||| |||||| ||||||||||| Sbjct: 443 gaaagatataggattcccatatgtatggtctatgaatt-catcataaaaaaaaggcaatg 501 Query: 118 tgaaaaagcatcaatataataaaa 141 ||| |||||||||||||||||||| Sbjct: 502 tgataaagcatcaatataataaaa 525
>gb|AY855878.1| Musa textilis voucher NEU0001 (CIRAD) ribosomal protein 16 (rpl16) gene, partial cds; chloroplast Length = 1033 Score = 101 bits (51), Expect = 3e-18 Identities = 162/194 (83%), Gaps = 5/194 (2%) Strand = Plus / Minus Query: 194 aataataaagagccgcccgggttaataaaa-ctgagaaaattaactcggaaagaaatttt 252 |||||||||||||| | |||||||||||| || || | ||| ||||| ||| |||||| Sbjct: 673 aataataaagagcctc--gggttaataaaaactaaggagattgactcgagaaggaatttt 616 Query: 253 -ttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 311 |||| |||||| |||| | |||||||||||||||| | |||||||| |||||||||| Sbjct: 615 gttgggagctccattgcagagttcagacctaaccattaatggagaagctatgggaacgac 556 Query: 312 agaacctatgattccataggattttattgaaaa-gaatcctaacacttcattgggtggga 370 |||||| ||| | ||||||||| || |||||| |||||| || | |||||||||||||| Sbjct: 555 ggaacctgtgactgcataggattctactgaaaacgaatccgaataattcattgggtggga 496 Query: 371 tggcggaacaaacc 384 ||||||||| |||| Sbjct: 495 tggcggaacgaacc 482 Score = 91.7 bits (46), Expect = 3e-15 Identities = 111/130 (85%), Gaps = 2/130 (1%) Strand = Plus / Minus Query: 4 caaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataaat 63 ||||| |||||||||||||||||| ||| |||||||||||||| ||| | ||||| Sbjct: 817 caaaaataaagggatgtggataaatggaaggatgatagaaagagagaacaa-aaatatca 759 Query: 64 aagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaaaa 123 | |||||| |||||| | ||||||||||||||||||| |||| ||||||||||||| || Sbjct: 758 atgatatatgattccaatatgtatggtctatgaattacctcat-aaaggcaatgtgataa 700 Query: 124 agcatcaata 133 |||||||||| Sbjct: 699 agcatcaata 690 Score = 48.1 bits (24), Expect = 0.034 Identities = 33/36 (91%) Strand = Plus / Minus Query: 423 aataagacaggaaagagtaaatattcgcccgcgaaa 458 ||||| |||| ||||||| ||||||||||||||||| Sbjct: 437 aataaaacagtaaagagtcaatattcgcccgcgaaa 402
>gb|AY855877.1| Musa troglodytarum voucher NEU0388 (CIRAD) ribosomal protein 16 (rpl16) gene, partial cds; chloroplast Length = 1032 Score = 101 bits (51), Expect = 3e-18 Identities = 162/194 (83%), Gaps = 5/194 (2%) Strand = Plus / Minus Query: 194 aataataaagagccgcccgggttaataaaa-ctgagaaaattaactcggaaagaaatttt 252 |||||||||||||| | |||||||||||| || || | ||| ||||| ||| |||||| Sbjct: 673 aataataaagagcctc--gggttaataaaaactaaggagattgactcgagaaggaatttt 616 Query: 253 -ttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 311 |||| |||||| |||| | |||||||||||||||| | |||||||| |||||||||| Sbjct: 615 gttgggagctccattgcagagttcagacctaaccattaatggagaagctatgggaacgac 556 Query: 312 agaacctatgattccataggattttattgaaaa-gaatcctaacacttcattgggtggga 370 |||||| ||| | ||||||||| || |||||| |||||| || | |||||||||||||| Sbjct: 555 ggaacctgtgactgcataggattctactgaaaacgaatccgaataattcattgggtggga 496 Query: 371 tggcggaacaaacc 384 ||||||||| |||| Sbjct: 495 tggcggaacgaacc 482 Score = 91.7 bits (46), Expect = 3e-15 Identities = 111/130 (85%), Gaps = 2/130 (1%) Strand = Plus / Minus Query: 4 caaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataaat 63 ||||| |||||||||||||||||| ||| |||||||||||||| ||| | ||||| Sbjct: 817 caaaaataaagggatgtggataaatggaaggatgatagaaagagagaacaa-aaatatca 759 Query: 64 aagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaaaa 123 | |||||| |||||| | ||||||||||||||||||| |||| ||||||||||||| || Sbjct: 758 atgatatatgattccaatatgtatggtctatgaattacctcat-aaaggcaatgtgataa 700 Query: 124 agcatcaata 133 |||||||||| Sbjct: 699 agcatcaata 690 Score = 48.1 bits (24), Expect = 0.034 Identities = 33/36 (91%) Strand = Plus / Minus Query: 423 aataagacaggaaagagtaaatattcgcccgcgaaa 458 ||||| |||| ||||||| ||||||||||||||||| Sbjct: 437 aataaaacagtaaagagtcaatattcgcccgcgaaa 402
>gb|AY855876.1| Musa troglodytarum voucher NEU0385 (CIRAD) ribosomal protein 16 (rpl16) gene, partial cds; chloroplast Length = 1032 Score = 101 bits (51), Expect = 3e-18 Identities = 162/194 (83%), Gaps = 5/194 (2%) Strand = Plus / Minus Query: 194 aataataaagagccgcccgggttaataaaa-ctgagaaaattaactcggaaagaaatttt 252 |||||||||||||| | |||||||||||| || || | ||| ||||| ||| |||||| Sbjct: 673 aataataaagagcctc--gggttaataaaaactaaggagattgactcgagaaggaatttt 616 Query: 253 -ttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 311 |||| |||||| |||| | |||||||||||||||| | |||||||| |||||||||| Sbjct: 615 gttgggagctccattgcagagttcagacctaaccattaatggagaagctatgggaacgac 556 Query: 312 agaacctatgattccataggattttattgaaaa-gaatcctaacacttcattgggtggga 370 |||||| ||| | ||||||||| || |||||| |||||| || | |||||||||||||| Sbjct: 555 ggaacctgtgactgcataggattctactgaaaacgaatccgaataattcattgggtggga 496 Query: 371 tggcggaacaaacc 384 ||||||||| |||| Sbjct: 495 tggcggaacgaacc 482 Score = 91.7 bits (46), Expect = 3e-15 Identities = 111/130 (85%), Gaps = 2/130 (1%) Strand = Plus / Minus Query: 4 caaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataaat 63 ||||| |||||||||||||||||| ||| |||||||||||||| ||| | ||||| Sbjct: 817 caaaaataaagggatgtggataaatggaaggatgatagaaagagagaacaa-aaatatca 759 Query: 64 aagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaaaa 123 | |||||| |||||| | ||||||||||||||||||| |||| ||||||||||||| || Sbjct: 758 atgatatatgattccaatatgtatggtctatgaattacctcat-aaaggcaatgtgataa 700 Query: 124 agcatcaata 133 |||||||||| Sbjct: 699 agcatcaata 690 Score = 48.1 bits (24), Expect = 0.034 Identities = 33/36 (91%) Strand = Plus / Minus Query: 423 aataagacaggaaagagtaaatattcgcccgcgaaa 458 ||||| |||| ||||||| ||||||||||||||||| Sbjct: 437 aataaaacagtaaagagtcaatattcgcccgcgaaa 402
>gb|AY855875.1| Musa jackeyi voucher NEU0389 (CIRAD) ribosomal protein 16 (rpl16) gene, partial cds; chloroplast Length = 1032 Score = 101 bits (51), Expect = 3e-18 Identities = 162/194 (83%), Gaps = 5/194 (2%) Strand = Plus / Minus Query: 194 aataataaagagccgcccgggttaataaaa-ctgagaaaattaactcggaaagaaatttt 252 |||||||||||||| | |||||||||||| || || | ||| ||||| ||| |||||| Sbjct: 673 aataataaagagcctc--gggttaataaaaactaaggagattgactcgagaaggaatttt 616 Query: 253 -ttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 311 |||| |||||| |||| | |||||||||||||||| | |||||||| |||||||||| Sbjct: 615 gttgggagctccattgcagagttcagacctaaccattaatggagaagctatgggaacgac 556 Query: 312 agaacctatgattccataggattttattgaaaa-gaatcctaacacttcattgggtggga 370 |||||| ||| | ||||||||| || |||||| |||||| || | |||||||||||||| Sbjct: 555 ggaacctgtgactgcataggattctactgaaaacgaatccgaataattcattgggtggga 496 Query: 371 tggcggaacaaacc 384 ||||||||| |||| Sbjct: 495 tggcggaacgaacc 482 Score = 91.7 bits (46), Expect = 3e-15 Identities = 111/130 (85%), Gaps = 2/130 (1%) Strand = Plus / Minus Query: 4 caaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataaat 63 ||||| |||||||||||||||||| ||| |||||||||||||| ||| | ||||| Sbjct: 817 caaaaataaagggatgtggataaatggaaggatgatagaaagagagaacaa-aaatatca 759 Query: 64 aagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaaaa 123 | |||||| |||||| | ||||||||||||||||||| |||| ||||||||||||| || Sbjct: 758 atgatatatgattccaatatgtatggtctatgaattacctcat-aaaggcaatgtgataa 700 Query: 124 agcatcaata 133 |||||||||| Sbjct: 699 agcatcaata 690 Score = 48.1 bits (24), Expect = 0.034 Identities = 33/36 (91%) Strand = Plus / Minus Query: 423 aataagacaggaaagagtaaatattcgcccgcgaaa 458 ||||| |||| ||||||| ||||||||||||||||| Sbjct: 437 aataaaacagtaaagagtcaatattcgcccgcgaaa 402
>gb|AY500680.1| Physocarpus opulifolius voucher JSh1015 rpl16 gene, intron; chloroplast Length = 932 Score = 93.7 bits (47), Expect = 6e-16 Identities = 108/127 (85%), Gaps = 1/127 (0%) Strand = Plus / Plus Query: 259 gctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgacagaacct 318 ||||||||| | ||||||||||||||||| | |||||| |||||||||||||||||| Sbjct: 404 gctccgttgtagaattcagacctaaccattaatcgagaagtggtgggaacgacagaacct 463 Query: 319 atgattccataggattttattgaaaa-gaatcctaacacttcattgggtgggatggcgga 377 ||| | |||| |||| ||||||||| ||||||||| |||||||||| |||||||||| Sbjct: 464 gtgaatgcataagattctattgaaaacgaatcctaatgattcattgggtaggatggcgga 523 Query: 378 acaaacc 384 || |||| Sbjct: 524 acgaacc 530 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 433 gaaagagtaaatattcgcccgcgaa 457 ||||||||||||||||||||||||| Sbjct: 591 gaaagagtaaatattcgcccgcgaa 615
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 93.7 bits (47), Expect = 6e-16 Identities = 65/71 (91%) Strand = Plus / Plus Query: 542 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 601 |||||||||||| |||||||||| || |||||||| ||||||||||||||||||||| | Sbjct: 24915926 taaatatagaatatagataaataaacatacacatctagatatattctagatcttctttct 24915985 Query: 602 tgactatatat 612 ||||||||||| Sbjct: 24915986 tgactatatat 24915996 Score = 54.0 bits (27), Expect = 6e-04 Identities = 40/43 (93%), Gaps = 1/43 (2%) Strand = Plus / Plus Query: 462 ttattgaattagaatactttaccgcgattcaataagagtaaaa 504 |||||||||||||| |||||||| ||||| ||||||||||||| Sbjct: 24915853 ttattgaattagaa-actttaccacgatttaataagagtaaaa 24915894 Score = 52.0 bits (26), Expect = 0.002 Identities = 48/54 (88%), Gaps = 1/54 (1%) Strand = Plus / Minus Query: 208 gcccgggttaataaaactgagaaaattaactcggaaagaaattttttggaagct 261 ||||||||||||||||||| ||||| | | ||||||||| | |||||||||||| Sbjct: 10696488 gcccgggttaataaaactgtgaaaa-tgattcggaaagagaatttttggaagct 10696436 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 96 aattacatcataaaaggcaat 116 ||||||||||||||||||||| Sbjct: 20399979 aattacatcataaaaggcaat 20399999
>dbj|AP006523.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1215B07 Length = 165957 Score = 93.7 bits (47), Expect = 6e-16 Identities = 65/71 (91%) Strand = Plus / Plus Query: 542 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 601 |||||||||||| |||||||||| || |||||||| ||||||||||||||||||||| | Sbjct: 77209 taaatatagaatatagataaataaacatacacatctagatatattctagatcttctttct 77268 Query: 602 tgactatatat 612 ||||||||||| Sbjct: 77269 tgactatatat 77279 Score = 54.0 bits (27), Expect = 6e-04 Identities = 40/43 (93%), Gaps = 1/43 (2%) Strand = Plus / Plus Query: 462 ttattgaattagaatactttaccgcgattcaataagagtaaaa 504 |||||||||||||| |||||||| ||||| ||||||||||||| Sbjct: 77136 ttattgaattagaa-actttaccacgatttaataagagtaaaa 77177
>gb|AY727405.1| Trillium ovatum rpL16 gene, intron; chloroplast Length = 988 Score = 93.7 bits (47), Expect = 6e-16 Identities = 108/127 (85%), Gaps = 1/127 (0%) Strand = Plus / Plus Query: 259 gctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgacagaacct 318 ||||| |||| | |||||| |||||||||| | || ||||| |||||||||||||||| Sbjct: 435 gctccattgcagaattcaggcctaaccattaatggcgaagctatgggaacgacagaaccc 494 Query: 319 atgattccataggattttattgaaaa-gaatcctaacacttcattgggtgggatggcgga 377 ||||| |||||||| ||||||||| ||||||||| ||||||||||||||||||||| Sbjct: 495 gtgattgtataggattctattgaaaacgaatcctaatgattcattgggtgggatggcgga 554 Query: 378 acaaacc 384 || |||| Sbjct: 555 acgaacc 561 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 74 attccactgtgtatggtctatgaattacatcataaaaggcaatgtgaaaaagcatca 130 |||||| | |||||||||||||||| | |||||||||||| ||||| ||||||||| Sbjct: 291 attccaatatgtatggtctatgaatcatctcataaaaggcagtgtgataaagcatca 347 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 433 gaaagagtaaatattcgcccgcgaa 457 |||||||| |||||||||||||||| Sbjct: 625 gaaagagtcaatattcgcccgcgaa 649
>gb|AY855889.1| Musa x paradisiaca voucher TM128 ribosomal protein 16 (rpl16) gene, partial cds; chloroplast Length = 1074 Score = 93.7 bits (47), Expect = 6e-16 Identities = 161/194 (82%), Gaps = 5/194 (2%) Strand = Plus / Minus Query: 194 aataataaagagccgcccgggttaataaaa-ctgagaaaattaactcggaaagaaatttt 252 |||||||||||||| | |||||||||||| || || | ||| ||||| ||| |||||| Sbjct: 651 aataataaagagcctc--gggttaataaaaactaaggagattgactcgagaaggaatttt 594 Query: 253 -ttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 311 |||| |||||| |||| | ||||| |||||||||| | |||||||| |||||||||| Sbjct: 593 gttgggagctccattgcagagttcaggcctaaccattaacggagaagctatgggaacgac 534 Query: 312 agaacctatgattccataggattttattgaaaa-gaatcctaacacttcattgggtggga 370 |||||| ||| | ||||||||| || |||||| |||||| || | |||||||||||||| Sbjct: 533 ggaacctgtgactgcataggattctactgaaaacgaatccgaataattcattgggtggga 474 Query: 371 tggcggaacaaacc 384 ||||||||| |||| Sbjct: 473 tggcggaacgaacc 460 Score = 91.7 bits (46), Expect = 3e-15 Identities = 111/130 (85%), Gaps = 2/130 (1%) Strand = Plus / Minus Query: 4 caaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataaat 63 ||||| |||||||||||||||||| ||| |||||||||||||| ||| | ||||| Sbjct: 804 caaaaataaagggatgtggataaatggaaggatgatagaaagagagaacaa-aaatatca 746 Query: 64 aagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaaaa 123 | |||||| |||||| | ||||||||||||||||||| |||| ||||||||||||| || Sbjct: 745 atgatatatgattccaatatgtatggtctatgaattacctcat-aaaggcaatgtgataa 687 Query: 124 agcatcaata 133 |||||||||| Sbjct: 686 agcatcaata 677 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 423 aataagacaggaaagagtaaatattcgcccgcgaaa 458 ||||| |||| ||||||||||||||||||||||||| Sbjct: 415 aataaaacagtaaagagtaaatattcgcccgcgaaa 380
>gb|AY855888.1| Musa x paradisiaca voucher ITC0677 ribosomal protein 16 (rpl16) gene, partial cds; chloroplast Length = 1073 Score = 93.7 bits (47), Expect = 6e-16 Identities = 161/194 (82%), Gaps = 5/194 (2%) Strand = Plus / Minus Query: 194 aataataaagagccgcccgggttaataaaa-ctgagaaaattaactcggaaagaaatttt 252 |||||||||||||| | |||||||||||| || || | ||| ||||| ||| |||||| Sbjct: 651 aataataaagagcctc--gggttaataaaaactaaggagattgactcgagaaggaatttt 594 Query: 253 -ttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 311 |||| |||||| |||| | ||||| |||||||||| | |||||||| |||||||||| Sbjct: 593 gttgggagctccattgcagagttcaggcctaaccattaacggagaagctatgggaacgac 534 Query: 312 agaacctatgattccataggattttattgaaaa-gaatcctaacacttcattgggtggga 370 |||||| ||| | ||||||||| || |||||| |||||| || | |||||||||||||| Sbjct: 533 ggaacctgtgactgcataggattctactgaaaacgaatccgaataattcattgggtggga 474 Query: 371 tggcggaacaaacc 384 ||||||||| |||| Sbjct: 473 tggcggaacgaacc 460 Score = 91.7 bits (46), Expect = 3e-15 Identities = 111/130 (85%), Gaps = 2/130 (1%) Strand = Plus / Minus Query: 4 caaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataaat 63 ||||| |||||||||||||||||| ||| |||||||||||||| ||| | ||||| Sbjct: 804 caaaaataaagggatgtggataaatggaaggatgatagaaagagagaacaa-aaatatca 746 Query: 64 aagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaaaa 123 | |||||| |||||| | ||||||||||||||||||| |||| ||||||||||||| || Sbjct: 745 atgatatatgattccaatatgtatggtctatgaattacctcat-aaaggcaatgtgataa 687 Query: 124 agcatcaata 133 |||||||||| Sbjct: 686 agcatcaata 677 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 423 aataagacaggaaagagtaaatattcgcccgcgaaa 458 ||||| |||| ||||||||||||||||||||||||| Sbjct: 415 aataaaacagtaaagagtaaatattcgcccgcgaaa 380
>gb|AY855886.1| Musa x paradisiaca voucher ITC0983 ribosomal protein 16 (rpl16) gene, partial cds; chloroplast Length = 1074 Score = 93.7 bits (47), Expect = 6e-16 Identities = 161/194 (82%), Gaps = 5/194 (2%) Strand = Plus / Minus Query: 194 aataataaagagccgcccgggttaataaaa-ctgagaaaattaactcggaaagaaatttt 252 |||||||||||||| | |||||||||||| || || | ||| ||||| ||| |||||| Sbjct: 651 aataataaagagcctc--gggttaataaaaactaaggagattgactcgagaaggaatttt 594 Query: 253 -ttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 311 |||| |||||| |||| | ||||| |||||||||| | |||||||| |||||||||| Sbjct: 593 gttgggagctccattgcagagttcaggcctaaccattaacggagaagctatgggaacgac 534 Query: 312 agaacctatgattccataggattttattgaaaa-gaatcctaacacttcattgggtggga 370 |||||| ||| | ||||||||| || |||||| |||||| || | |||||||||||||| Sbjct: 533 ggaacctgtgactgcataggattctactgaaaacgaatccgaataattcattgggtggga 474 Query: 371 tggcggaacaaacc 384 ||||||||| |||| Sbjct: 473 tggcggaacgaacc 460 Score = 91.7 bits (46), Expect = 3e-15 Identities = 111/130 (85%), Gaps = 2/130 (1%) Strand = Plus / Minus Query: 4 caaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataaat 63 ||||| |||||||||||||||||| ||| |||||||||||||| ||| | ||||| Sbjct: 804 caaaaataaagggatgtggataaatggaaggatgatagaaagagagaacaa-aaatatca 746 Query: 64 aagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaaaa 123 | |||||| |||||| | ||||||||||||||||||| |||| ||||||||||||| || Sbjct: 745 atgatatatgattccaatatgtatggtctatgaattacctcat-aaaggcaatgtgataa 687 Query: 124 agcatcaata 133 |||||||||| Sbjct: 686 agcatcaata 677 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 423 aataagacaggaaagagtaaatattcgcccgcgaaa 458 ||||| |||| ||||||||||||||||||||||||| Sbjct: 415 aataaaacagtaaagagtaaatattcgcccgcgaaa 380
>gb|AY855885.1| Musa x paradisiaca voucher TM139 ribosomal protein 16 (rpl16) gene, partial cds; chloroplast Length = 1074 Score = 93.7 bits (47), Expect = 6e-16 Identities = 161/194 (82%), Gaps = 5/194 (2%) Strand = Plus / Minus Query: 194 aataataaagagccgcccgggttaataaaa-ctgagaaaattaactcggaaagaaatttt 252 |||||||||||||| | |||||||||||| || || | ||| ||||| ||| |||||| Sbjct: 651 aataataaagagcctc--gggttaataaaaactaaggagattgactcgagaaggaatttt 594 Query: 253 -ttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 311 |||| |||||| |||| | ||||| |||||||||| | |||||||| |||||||||| Sbjct: 593 gttgggagctccattgcagagttcaggcctaaccattaacggagaagctatgggaacgac 534 Query: 312 agaacctatgattccataggattttattgaaaa-gaatcctaacacttcattgggtggga 370 |||||| ||| | ||||||||| || |||||| |||||| || | |||||||||||||| Sbjct: 533 ggaacctgtgactgcataggattctactgaaaacgaatccgaataattcattgggtggga 474 Query: 371 tggcggaacaaacc 384 ||||||||| |||| Sbjct: 473 tggcggaacgaacc 460 Score = 91.7 bits (46), Expect = 3e-15 Identities = 111/130 (85%), Gaps = 2/130 (1%) Strand = Plus / Minus Query: 4 caaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataaat 63 ||||| |||||||||||||||||| ||| |||||||||||||| ||| | ||||| Sbjct: 804 caaaaataaagggatgtggataaatggaaggatgatagaaagagagaacaa-aaatatca 746 Query: 64 aagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaaaa 123 | |||||| |||||| | ||||||||||||||||||| |||| ||||||||||||| || Sbjct: 745 atgatatatgattccaatatgtatggtctatgaattacctcat-aaaggcaatgtgataa 687 Query: 124 agcatcaata 133 |||||||||| Sbjct: 686 agcatcaata 677 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 423 aataagacaggaaagagtaaatattcgcccgcgaaa 458 ||||| |||| ||||||||||||||||||||||||| Sbjct: 415 aataaaacagtaaagagtaaatattcgcccgcgaaa 380
>gb|AY855884.1| Musa acuminata voucher TM71 (QSG) ribosomal protein 16 (rpl16) gene, partial cds; chloroplast Length = 1073 Score = 93.7 bits (47), Expect = 6e-16 Identities = 161/194 (82%), Gaps = 5/194 (2%) Strand = Plus / Minus Query: 194 aataataaagagccgcccgggttaataaaa-ctgagaaaattaactcggaaagaaatttt 252 |||||||||||||| | |||||||||||| || || | ||| ||||| ||| |||||| Sbjct: 651 aataataaagagcctc--gggttaataaaaactaaggagattgactcgagaaggaatttt 594 Query: 253 -ttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 311 |||| |||||| |||| | ||||| |||||||||| | |||||||| |||||||||| Sbjct: 593 gttgggagctccattgcagagttcaggcctaaccattaacggagaagctatgggaacgac 534 Query: 312 agaacctatgattccataggattttattgaaaa-gaatcctaacacttcattgggtggga 370 |||||| ||| | ||||||||| || |||||| |||||| || | |||||||||||||| Sbjct: 533 ggaacctgtgactgcataggattctactgaaaacgaatccgaataattcattgggtggga 474 Query: 371 tggcggaacaaacc 384 ||||||||| |||| Sbjct: 473 tggcggaacgaacc 460 Score = 91.7 bits (46), Expect = 3e-15 Identities = 111/130 (85%), Gaps = 2/130 (1%) Strand = Plus / Minus Query: 4 caaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataaat 63 ||||| |||||||||||||||||| ||| |||||||||||||| ||| | ||||| Sbjct: 804 caaaaataaagggatgtggataaatggaaggatgatagaaagagagaacaa-aaatatca 746 Query: 64 aagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaaaa 123 | |||||| |||||| | ||||||||||||||||||| |||| ||||||||||||| || Sbjct: 745 atgatatatgattccaatatgtatggtctatgaattacctcat-aaaggcaatgtgataa 687 Query: 124 agcatcaata 133 |||||||||| Sbjct: 686 agcatcaata 677 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 423 aataagacaggaaagagtaaatattcgcccgcgaaa 458 ||||| |||| ||||||||||||||||||||||||| Sbjct: 415 aataaaacagtaaagagtaaatattcgcccgcgaaa 380
>gb|AY855881.1| Musa banksii voucher ITC0254 (CIRAD) ribosomal protein 16 (rpl16) gene, partial cds; chloroplast Length = 1073 Score = 93.7 bits (47), Expect = 6e-16 Identities = 161/194 (82%), Gaps = 5/194 (2%) Strand = Plus / Minus Query: 194 aataataaagagccgcccgggttaataaaa-ctgagaaaattaactcggaaagaaatttt 252 |||||||||||||| | |||||||||||| || || | ||| ||||| ||| |||||| Sbjct: 651 aataataaagagcctc--gggttaataaaaactaaggagattgactcgagaaggaatttt 594 Query: 253 -ttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 311 |||| |||||| |||| | ||||| |||||||||| | |||||||| |||||||||| Sbjct: 593 gttgggagctccattgcagagttcaggcctaaccattaacggagaagctatgggaacgac 534 Query: 312 agaacctatgattccataggattttattgaaaa-gaatcctaacacttcattgggtggga 370 |||||| ||| | ||||||||| || |||||| |||||| || | |||||||||||||| Sbjct: 533 ggaacctgtgactgcataggattctactgaaaacgaatccgaataattcattgggtggga 474 Query: 371 tggcggaacaaacc 384 ||||||||| |||| Sbjct: 473 tggcggaacgaacc 460 Score = 91.7 bits (46), Expect = 3e-15 Identities = 111/130 (85%), Gaps = 2/130 (1%) Strand = Plus / Minus Query: 4 caaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataaat 63 ||||| |||||||||||||||||| ||| |||||||||||||| ||| | ||||| Sbjct: 804 caaaaataaagggatgtggataaatggaaggatgatagaaagagagaacaa-aaatatca 746 Query: 64 aagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaaaa 123 | |||||| |||||| | ||||||||||||||||||| |||| ||||||||||||| || Sbjct: 745 atgatatatgattccaatatgtatggtctatgaattacctcat-aaaggcaatgtgataa 687 Query: 124 agcatcaata 133 |||||||||| Sbjct: 686 agcatcaata 677 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 423 aataagacaggaaagagtaaatattcgcccgcgaaa 458 ||||| |||| ||||||||||||||||||||||||| Sbjct: 415 aataaaacagtaaagagtaaatattcgcccgcgaaa 380
>gb|AY855880.1| Musa acuminata subsp. malaccensis voucher ITC0250 (CIRAD) ribosomal protein 16 (rpl16) gene, partial cds; chloroplast Length = 1073 Score = 93.7 bits (47), Expect = 6e-16 Identities = 161/194 (82%), Gaps = 5/194 (2%) Strand = Plus / Minus Query: 194 aataataaagagccgcccgggttaataaaa-ctgagaaaattaactcggaaagaaatttt 252 |||||||||||||| | |||||||||||| || || | ||| ||||| ||| |||||| Sbjct: 651 aataataaagagcctc--gggttaataaaaactaaggagattgactcgagaaggaatttt 594 Query: 253 -ttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 311 |||| |||||| |||| | ||||| |||||||||| | |||||||| |||||||||| Sbjct: 593 gttgggagctccattgcagagttcaggcctaaccattaacggagaagctatgggaacgac 534 Query: 312 agaacctatgattccataggattttattgaaaa-gaatcctaacacttcattgggtggga 370 |||||| ||| | ||||||||| || |||||| |||||| || | |||||||||||||| Sbjct: 533 ggaacctgtgactgcataggattctactgaaaacgaatccgaataattcattgggtggga 474 Query: 371 tggcggaacaaacc 384 ||||||||| |||| Sbjct: 473 tggcggaacgaacc 460 Score = 91.7 bits (46), Expect = 3e-15 Identities = 111/130 (85%), Gaps = 2/130 (1%) Strand = Plus / Minus Query: 4 caaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataaat 63 ||||| |||||||||||||||||| ||| |||||||||||||| ||| | ||||| Sbjct: 804 caaaaataaagggatgtggataaatggaaggatgatagaaagagagaacaa-aaatatca 746 Query: 64 aagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaaaa 123 | |||||| |||||| | ||||||||||||||||||| |||| ||||||||||||| || Sbjct: 745 atgatatatgattccaatatgtatggtctatgaattacctcat-aaaggcaatgtgataa 687 Query: 124 agcatcaata 133 |||||||||| Sbjct: 686 agcatcaata 677 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 423 aataagacaggaaagagtaaatattcgcccgcgaaa 458 ||||| |||| ||||||||||||||||||||||||| Sbjct: 415 aataaaacagtaaagagtaaatattcgcccgcgaaa 380
>gb|AY855879.1| Musa acuminata subsp. malaccensis voucher TM68 ribosomal protein 16 (rpl16) gene, partial cds; chloroplast Length = 1073 Score = 93.7 bits (47), Expect = 6e-16 Identities = 161/194 (82%), Gaps = 5/194 (2%) Strand = Plus / Minus Query: 194 aataataaagagccgcccgggttaataaaa-ctgagaaaattaactcggaaagaaatttt 252 |||||||||||||| | |||||||||||| || || | ||| ||||| ||| |||||| Sbjct: 651 aataataaagagcctc--gggttaataaaaactaaggagattgactcgagaaggaatttt 594 Query: 253 -ttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 311 |||| |||||| |||| | ||||| |||||||||| | |||||||| |||||||||| Sbjct: 593 gttgggagctccattgcagagttcaggcctaaccattaacggagaagctatgggaacgac 534 Query: 312 agaacctatgattccataggattttattgaaaa-gaatcctaacacttcattgggtggga 370 |||||| ||| | ||||||||| || |||||| |||||| || | |||||||||||||| Sbjct: 533 ggaacctgtgactgcataggattctactgaaaacgaatccgaataattcattgggtggga 474 Query: 371 tggcggaacaaacc 384 ||||||||| |||| Sbjct: 473 tggcggaacgaacc 460 Score = 91.7 bits (46), Expect = 3e-15 Identities = 111/130 (85%), Gaps = 2/130 (1%) Strand = Plus / Minus Query: 4 caaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataaat 63 ||||| |||||||||||||||||| ||| |||||||||||||| ||| | ||||| Sbjct: 804 caaaaataaagggatgtggataaatggaaggatgatagaaagagagaacaa-aaatatca 746 Query: 64 aagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaaaa 123 | |||||| |||||| | ||||||||||||||||||| |||| ||||||||||||| || Sbjct: 745 atgatatatgattccaatatgtatggtctatgaattacctcat-aaaggcaatgtgataa 687 Query: 124 agcatcaata 133 |||||||||| Sbjct: 686 agcatcaata 677 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 423 aataagacaggaaagagtaaatattcgcccgcgaaa 458 ||||| |||| ||||||||||||||||||||||||| Sbjct: 415 aataaaacagtaaagagtaaatattcgcccgcgaaa 380
>gb|AY855890.1| Musa x paradisiaca voucher ITC0116 ribosomal protein 16 (rpl16) gene, partial cds; chloroplast Length = 1073 Score = 91.7 bits (46), Expect = 3e-15 Identities = 111/130 (85%), Gaps = 2/130 (1%) Strand = Plus / Minus Query: 4 caaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataaat 63 ||||| |||||||||||||||||| ||| |||||||||||||| ||| | ||||| Sbjct: 804 caaaaataaagggatgtggataaatggaaggatgatagaaagagagaacaa-aaatatca 746 Query: 64 aagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaaaa 123 | |||||| |||||| | ||||||||||||||||||| |||| ||||||||||||| || Sbjct: 745 atgatatatgattccaatatgtatggtctatgaattacctcat-aaaggcaatgtgataa 687 Query: 124 agcatcaata 133 |||||||||| Sbjct: 686 agcatcaata 677 Score = 85.7 bits (43), Expect = 2e-13 Identities = 160/194 (82%), Gaps = 5/194 (2%) Strand = Plus / Minus Query: 194 aataataaagagccgcccgggttaataaaa-ctgagaaaattaactcggaaagaaatttt 252 |||||||||||||| | |||||||||||| || || | ||| ||||| ||| |||||| Sbjct: 651 aataataaagagcctc--gggttaataaaaactaaggagattgactcgagaaggaatttt 594 Query: 253 -ttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 311 |||| |||||| |||| | ||||| |||||||||| | |||||||| |||||||||| Sbjct: 593 gttgggagctccattgcagagttcaggcctaaccattaacggagaagctatgggaacgac 534 Query: 312 agaacctatgattccataggattttattgaaaa-gaatcctaacacttcattgggtggga 370 |||||| ||| | ||||| ||| || |||||| |||||| || | |||||||||||||| Sbjct: 533 ggaacctgtgactgcatagaattctactgaaaacgaatccgaataattcattgggtggga 474 Query: 371 tggcggaacaaacc 384 ||||||||| |||| Sbjct: 473 tggcggaacgaacc 460 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 423 aataagacaggaaagagtaaatattcgcccgcgaaa 458 ||||| |||| ||||||||||||||||||||||||| Sbjct: 415 aataaaacagtaaagagtaaatattcgcccgcgaaa 380
>gb|AY855887.1| Musa x paradisiaca voucher TM110 (KU) ribosomal protein 16 (rpl16) gene, partial cds; chloroplast Length = 1073 Score = 91.7 bits (46), Expect = 3e-15 Identities = 111/130 (85%), Gaps = 2/130 (1%) Strand = Plus / Minus Query: 4 caaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataaat 63 ||||| |||||||||||||||||| ||| |||||||||||||| ||| | ||||| Sbjct: 804 caaaaataaagggatgtggataaatggaaggatgatagaaagagagaacaa-aaatatca 746 Query: 64 aagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaaaa 123 | |||||| |||||| | ||||||||||||||||||| |||| ||||||||||||| || Sbjct: 745 atgatatatgattccaatatgtatggtctatgaattacctcat-aaaggcaatgtgataa 687 Query: 124 agcatcaata 133 |||||||||| Sbjct: 686 agcatcaata 677 Score = 85.7 bits (43), Expect = 2e-13 Identities = 160/194 (82%), Gaps = 5/194 (2%) Strand = Plus / Minus Query: 194 aataataaagagccgcccgggttaataaaa-ctgagaaaattaactcggaaagaaatttt 252 |||||||||||||| | |||||||||||| || || | ||| ||||| ||| |||||| Sbjct: 651 aataataaagagcctc--gggttaataaaaactaaggagattgactcgagaaggaatttt 594 Query: 253 -ttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 311 |||| |||||| |||| | ||||| |||||||||| | |||||||| |||||||||| Sbjct: 593 gttgggagctccattgcagagttcaggcctaaccattaacggagaagctatgggaacgac 534 Query: 312 agaacctatgattccataggattttattgaaaa-gaatcctaacacttcattgggtggga 370 |||||| ||| | ||||| ||| || |||||| |||||| || | |||||||||||||| Sbjct: 533 ggaacctgtgactgcatagaattctactgaaaacgaatccgaataattcattgggtggga 474 Query: 371 tggcggaacaaacc 384 ||||||||| |||| Sbjct: 473 tggcggaacgaacc 460 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 423 aataagacaggaaagagtaaatattcgcccgcgaaa 458 ||||| |||| ||||||||||||||||||||||||| Sbjct: 415 aataaaacagtaaagagtaaatattcgcccgcgaaa 380
>gb|AY855883.1| Musa acuminata subsp. siamea voucher TM051 ribosomal protein 16 (rpl16) gene, partial cds; chloroplast Length = 1073 Score = 91.7 bits (46), Expect = 3e-15 Identities = 111/130 (85%), Gaps = 2/130 (1%) Strand = Plus / Minus Query: 4 caaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataaat 63 ||||| |||||||||||||||||| ||| |||||||||||||| ||| | ||||| Sbjct: 804 caaaaataaagggatgtggataaatggaaggatgatagaaagagagaacaa-aaatatca 746 Query: 64 aagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaaaa 123 | |||||| |||||| | ||||||||||||||||||| |||| ||||||||||||| || Sbjct: 745 atgatatatgattccaatatgtatggtctatgaattacctcat-aaaggcaatgtgataa 687 Query: 124 agcatcaata 133 |||||||||| Sbjct: 686 agcatcaata 677 Score = 85.7 bits (43), Expect = 2e-13 Identities = 160/194 (82%), Gaps = 5/194 (2%) Strand = Plus / Minus Query: 194 aataataaagagccgcccgggttaataaaa-ctgagaaaattaactcggaaagaaatttt 252 |||||||||||||| | |||||||||||| || || | ||| ||||| ||| |||||| Sbjct: 651 aataataaagagcctc--gggttaataaaaactaaggagattgactcgagaaggaatttt 594 Query: 253 -ttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 311 |||| |||||| |||| | ||||| |||||||||| | |||||||| |||||||||| Sbjct: 593 gttgggagctccattgcagagttcaggcctaaccattaacggagaagctatgggaacgac 534 Query: 312 agaacctatgattccataggattttattgaaaa-gaatcctaacacttcattgggtggga 370 |||||| ||| | |||| |||| || |||||| |||||| || | |||||||||||||| Sbjct: 533 ggaacctgtgactgcatatgattctactgaaaacgaatccgaataattcattgggtggga 474 Query: 371 tggcggaacaaacc 384 ||||||||| |||| Sbjct: 473 tggcggaacgaacc 460 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 423 aataagacaggaaagagtaaatattcgcccgcgaaa 458 ||||| |||| ||||||||||||||||||||||||| Sbjct: 415 aataaaacagtaaagagtaaatattcgcccgcgaaa 380
>gb|AY855882.1| Musa acuminata subsp. siamea voucher TM91 (KU) ribosomal protein 16 (rpl16) gene, partial cds; chloroplast Length = 1073 Score = 91.7 bits (46), Expect = 3e-15 Identities = 111/130 (85%), Gaps = 2/130 (1%) Strand = Plus / Minus Query: 4 caaaactaaagggatgtggataaagggagggatgatagaaagaaggaagaggaaataaat 63 ||||| |||||||||||||||||| ||| |||||||||||||| ||| | ||||| Sbjct: 804 caaaaataaagggatgtggataaatggaaggatgatagaaagagagaacaa-aaatatca 746 Query: 64 aagatatagaattccactgtgtatggtctatgaattacatcataaaaggcaatgtgaaaa 123 | |||||| |||||| | ||||||||||||||||||| |||| ||||||||||||| || Sbjct: 745 atgatatatgattccaatatgtatggtctatgaattacctcat-aaaggcaatgtgataa 687 Query: 124 agcatcaata 133 |||||||||| Sbjct: 686 agcatcaata 677 Score = 85.7 bits (43), Expect = 2e-13 Identities = 160/194 (82%), Gaps = 5/194 (2%) Strand = Plus / Minus Query: 194 aataataaagagccgcccgggttaataaaa-ctgagaaaattaactcggaaagaaatttt 252 |||||||||||||| | |||||||||||| || || | ||| ||||| ||| |||||| Sbjct: 651 aataataaagagcctc--gggttaataaaaactaaggagattgactcgagaaggaatttt 594 Query: 253 -ttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 311 |||| |||||| |||| | ||||| |||||||||| | |||||||| |||||||||| Sbjct: 593 gttgggagctccattgcagagttcaggcctaaccattaacggagaagctatgggaacgac 534 Query: 312 agaacctatgattccataggattttattgaaaa-gaatcctaacacttcattgggtggga 370 |||||| ||| | ||||| ||| || |||||| |||||| || | |||||||||||||| Sbjct: 533 ggaacctgtgactgcatagaattctactgaaaacgaatccgaataattcattgggtggga 474 Query: 371 tggcggaacaaacc 384 ||||||||| |||| Sbjct: 473 tggcggaacgaacc 460 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 423 aataagacaggaaagagtaaatattcgcccgcgaaa 458 ||||| |||| ||||||||||||||||||||||||| Sbjct: 415 aataaaacagtaaagagtaaatattcgcccgcgaaa 380 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 9,382,666 Number of Sequences: 3902068 Number of extensions: 9382666 Number of successful extensions: 234665 Number of sequences better than 10.0: 2930 Number of HSP's better than 10.0 without gapping: 2903 Number of HSP's successfully gapped in prelim test: 31 Number of HSP's that attempted gapping in prelim test: 222818 Number of HSP's gapped (non-prelim): 10284 length of query: 612 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 589 effective length of database: 17,143,297,704 effective search space: 10097402347656 effective search space used: 10097402347656 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
