ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags12e18
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ZN297_CANFA (Q5TJE2) Zinc finger protein 297 28 5.3
2ZN297_HUMAN (O15209) Zinc finger protein 297 (BING1 protein) (Zi... 28 5.3
3SLAP1_CLOTM (Q06852) Cell surface glycoprotein 1 precursor (Oute... 28 5.3
4ZN297_MOUSE (Q9Z0G7) Zinc finger protein 297 (BING1 protein) 28 9.0
5FIG2_YEAST (P25653) Factor-induced gene 2 precursor (Cell wall a... 28 9.0

>ZN297_CANFA (Q5TJE2) Zinc finger protein 297|
          Length = 640

 Score = 28.5 bits (62), Expect = 5.3
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -2

Query: 103 EPASRTPSSSAEPRARSIATTPIPLPTTS 17
           EP+  +PS +A P   S+A  P+PLP  +
Sbjct: 2   EPSPLSPSGAALPLPLSLAPPPLPLPAAA 30



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>ZN297_HUMAN (O15209) Zinc finger protein 297 (BING1 protein) (Zinc finger and|
           BTB domain-containing protein 22A)
          Length = 634

 Score = 28.5 bits (62), Expect = 5.3
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -2

Query: 103 EPASRTPSSSAEPRARSIATTPIPLPTTS 17
           EP+  +PS +A P   S+A  P+PLP  +
Sbjct: 2   EPSPLSPSGAALPLPLSLAPPPLPLPAAA 30



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>SLAP1_CLOTM (Q06852) Cell surface glycoprotein 1 precursor (Outer layer protein|
            B) (S-layer protein 1)
          Length = 1664

 Score = 28.5 bits (62), Expect = 5.3
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -2

Query: 94   SRTPSSSAEPRARSIATTPIPLPTTSPRTGA 2
            S  P+ S  P   +  TTP P P+T+P +G+
Sbjct: 1367 SDEPTPSETPEEPTPTTTPTPTPSTTPTSGS 1397



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>ZN297_MOUSE (Q9Z0G7) Zinc finger protein 297 (BING1 protein)|
          Length = 638

 Score = 27.7 bits (60), Expect = 9.0
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = -2

Query: 103 EPASRTPSSSAEPRARSIATTPIPLPTTS 17
           EP++ +PS +  P   S+A  P+PLP  +
Sbjct: 2   EPSALSPSGATLPLPLSLAPPPLPLPAAA 30



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>FIG2_YEAST (P25653) Factor-induced gene 2 precursor (Cell wall adhesin FIG2)|
          Length = 1609

 Score = 27.7 bits (60), Expect = 9.0
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = -2

Query: 103 EPASRTPSSSAEPRARSIATTPIPLPTTSPRTGA 2
           E AS T SS+A+P   S +++   LP T+P + +
Sbjct: 126 EKASSTLSSTAQPHRTSHSSSSFELPVTAPSSSS 159


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,879,761
Number of Sequences: 219361
Number of extensions: 182071
Number of successful extensions: 1450
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1151
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1448
length of database: 80,573,946
effective HSP length: 26
effective length of database: 74,870,560
effective search space used: 1796893440
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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