ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags12e12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK103408.1| Oryza sativa (japonica cultivar-group) cDNA clon... 545 e-152
2dbj|AK059963.1| Oryza sativa (japonica cultivar-group) cDNA clon... 545 e-152
3gb|AY105601.1| Zea mays PCO088367 mRNA sequence 454 e-124
4dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 155 2e-34
5dbj|AP003232.3| Oryza sativa (japonica cultivar-group) genomic D... 155 2e-34
6gb|DQ213090.1| Taeniopygia guttata clone 0058P0012G03 DNA direct... 70 9e-09
7ref|XM_512960.1| PREDICTED: Pan troglodytes similar to DNA-direc... 62 2e-06
8gb|BC034144.1| Homo sapiens polymerase (RNA) II (DNA directed) p... 62 2e-06
9gb|BC004441.1| Homo sapiens polymerase (RNA) II (DNA directed) p... 62 2e-06
10dbj|AK122813.1| Homo sapiens cDNA FLJ16409 fis, clone BLADE20029... 62 2e-06
11gb|S42643.1| RNA polymerase II [human, mRNA, 144 nt] 62 2e-06
12ref|NM_002695.2| Homo sapiens polymerase (RNA) II (DNA directed)... 62 2e-06
13gb|J04965.1|HUMRNAPII Human RNA polymerase II 23kD subunit (POLR... 62 2e-06
14ref|NM_113130.2| Arabidopsis thaliana ATRPABC24.3; DNA binding /... 60 8e-06
15gb|AF412101.1|AF412101 Arabidopsis thaliana AT3g22320/MCB17_5 mR... 60 8e-06
16gb|AF370551.1|AF370551 Arabidopsis thaliana RNA polymerase I, II... 60 8e-06
17gb|AY086150.1| Arabidopsis thaliana clone 21828 mRNA, complete s... 60 8e-06
18ref|XM_216839.3| PREDICTED: Rattus norvegicus polymerase (RNA) I... 60 8e-06
19gb|BT002130.1| Arabidopsis thaliana RNA polymerase I, II and III... 60 8e-06
20gb|AF019248.1|AF019248 Arabidopsis thaliana RNA polymerase I, II... 60 8e-06
21dbj|D38251.1|HUMRPB5 Homo sapiens mRNA for RPB5 (XAP4), complete... 58 3e-05
22ref|XM_993991.1| PREDICTED: Mus musculus polymerase (RNA) II (DN... 54 5e-04
23ref|XM_282920.4| PREDICTED: Mus musculus polymerase (RNA) II (DN... 54 5e-04
24ref|XM_914488.2| PREDICTED: Mus musculus polymerase (RNA) II (DN... 54 5e-04
25emb|CR860977.1| Pongo pygmaeus mRNA; cDNA DKFZp459G0627 (from cl... 54 5e-04
26ref|NM_001038093.1| Bos taurus polymerase (RNA) II (DNA directed... 54 5e-04
27dbj|AK145201.1| Mus musculus mammary gland RCB-0527 Jyg-MC(B) cD... 54 5e-04
28dbj|AK132109.1| Mus musculus 13 days embryo head cDNA, RIKEN ful... 54 5e-04
29dbj|AK144668.1| Mus musculus lung RCB-0558 LLC cDNA, RIKEN full-... 54 5e-04
30dbj|AK088610.1| Mus musculus 2 days neonate thymus thymic cells ... 54 5e-04
31gb|BC111280.1| Bos taurus cDNA clone MGC:134612 IMAGE:8067228, c... 54 5e-04
32dbj|AK015823.1| Mus musculus adult male testis cDNA, RIKEN full-... 54 5e-04
33gb|AC004151.1|AC004151 Homo sapiens chromosome 19, cosmid R28738... 54 5e-04
34gb|BC005599.1| Mus musculus cDNA clone IMAGE:3482525, containing... 54 5e-04
35gb|BC045521.1| Mus musculus polymerase (RNA) II (DNA directed) p... 54 5e-04
36gb|BC037681.1| Mus musculus polymerase (RNA) II (DNA directed) p... 54 5e-04
37dbj|AP001889.5| Homo sapiens genomic DNA, chromosome 11 clone:RP... 52 0.002
38ref|XM_418224.1| PREDICTED: Gallus gallus similar to DNA-directe... 50 0.008
39emb|BX935442.2| Gallus gallus finished cDNA, clone ChEST254l2 50 0.008
40emb|BX935423.2| Gallus gallus finished cDNA, clone ChEST505h16 50 0.008
41emb|CR385484.1| Gallus gallus finished cDNA, clone ChEST974k21 50 0.008
42emb|BX930905.2| Gallus gallus finished cDNA, clone ChEST967e2 50 0.008
43emb|BX929663.1| Gallus gallus finished cDNA, clone ChEST799b22 50 0.008
44dbj|AB022215.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 50 0.008
45ref|NM_112541.1| Arabidopsis thaliana DNA binding / DNA-directed... 46 0.13
46dbj|AK010567.1| Mus musculus ES cells cDNA, RIKEN full-length en... 46 0.13
47dbj|AB022217.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 46 0.13
48gb|BT014445.1| Lycopersicon esculentum clone 133771F, mRNA sequence 44 0.50
49gb|AC150387.2| Branchiostoma floridae clone CH302-103N24, comple... 42 2.0
50ref|XM_472957.1| Oryza sativa (japonica cultivar-group), predic... 42 2.0
51gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, comple... 42 2.0
52dbj|AK100492.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.0
53ref|XM_515897.1| PREDICTED: Pan troglodytes similar to BC004636 ... 40 7.8
54ref|XM_524797.1| PREDICTED: Pan troglodytes potassium voltage-ga... 40 7.8
55ref|NM_024770.1| Homo sapiens methyltransferase like 8 (METTL8),... 40 7.8
56gb|AC115860.9| Mus musculus chromosome 1, clone RP24-290C11, com... 40 7.8
57gb|CP000352.1| Ralstonia metallidurans CH34, complete genome 40 7.8
58gb|BC064595.1| Homo sapiens cDNA clone IMAGE:5755761, partial cds 40 7.8
59ref|XM_754890.1| Ustilago maydis 521 hypothetical protein (UM038... 40 7.8
60gb|AC116709.4| Mus musculus chromosome 1, clone RP23-91L14, comp... 40 7.8
61gb|BC035059.1| Homo sapiens potassium voltage-gated channel, sha... 40 7.8
62emb|AL365361.12| Human DNA sequence from clone RP11-284N8 on chr... 40 7.8
63gb|AF192980.2| Trypanosoma cruzi flagellar calcium binding prote... 40 7.8
64dbj|AK124092.1| Homo sapiens cDNA FLJ42098 fis, clone TESOP2006041 40 7.8
65dbj|AK093218.1| Homo sapiens cDNA FLJ35899 fis, clone TESTI20095... 40 7.8
66emb|CR595622.1| full-length cDNA clone CS0DD006YH02 of Neuroblas... 40 7.8
67dbj|AK024046.1| Homo sapiens cDNA FLJ13984 fis, clone Y79AA1001846 40 7.8
68dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 40 7.8
69gb|M38217.1|HUMKCHN Homo sapiens voltage-gated potassium channel... 40 7.8
70ref|XM_685585.1| PREDICTED: Danio rerio similar to MGC83846 prot... 40 7.8
71ref|NM_002232.3| Homo sapiens potassium voltage-gated channel, s... 40 7.8
72emb|BX649437.8| Zebrafish DNA sequence from clone DKEY-28J9 in l... 40 7.8
73dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.8
74gb|AC007739.2| Homo sapiens BAC clone RP11-91L3 from 2, complete... 40 7.8
75gb|AY890524.1| Synthetic construct Homo sapiens clone FLH141226.... 40 7.8
76gb|L23499.1|HUMPOCH Homo sapiens voltage-gated potassium channel... 40 7.8
77gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.8
78gb|U38240.1|OCU38240 Oryctolagus cuniculus glibenclamide-sensiti... 40 7.8
79emb|AL732644.3|CNS08C9J Oryza sativa chromosome 12, . BAC OSJNBa... 40 7.8
80gb|AE017198.1| Lactobacillus johnsonii NCC 533, complete genome 40 7.8
81gb|L26971.1|TRBFCABP Trypanosoma cruzi calcium-binding protein m... 40 7.8
82gb|M85217.1|HUMKCHAN H.sapiens K+ channel protein (HLK3) mRNA, c... 40 7.8
83gb|M55515.1|HUMPCD Human potassium channel protein (HPCN3) gene,... 40 7.8 
>dbj|AK103408.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033128E13, full
           insert sequence
          Length = 986

 Score =  545 bits (275), Expect = e-152
 Identities = 494/566 (87%), Gaps = 1/566 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgcacatgctgcgcgaccgggggtacctggtggtggagcacgagctgtccatgacccgc 60
           ||||| |||||||| ||| | ||||||||||||||||||||||||||  |||||  ||||
Sbjct: 185 atgcagatgctgcgggacagagggtacctggtggtggagcacgagctcgccatgggccgc 244

                                                                       
Query: 61  cgcgacttccagcgcaagtacggcgagnaccttccaccgcgaggacatgctcatcaacaa 120
           ||||||||||  |||||||||||||||  ||||||||||||||||| | |||||||||||
Sbjct: 245 cgcgacttcctccgcaagtacggcgagt-ccttccaccgcgaggacctcctcatcaacaa 303

                                                                       
Query: 121 gtgcaagaagaacgaccccaacgaccagatttacgtgttcttccccaacgacgagaaggt 180
           || |||||||||||| |||  ||||||||| ||||| |||||||| ||||| || |||||
Sbjct: 304 gtacaagaagaacgatccctccgaccagatatacgttttcttccctaacgatgacaaggt 363

                                                                       
Query: 181 ggggatgaagcacatcaagaagtacgttgaaatgatgaacgccgagaaagtctcaagggc 240
           ||| ||||| ||||| ||||||||||| || |||||||| || ||||| ||||| || ||
Sbjct: 364 gggaatgaaacacataaagaagtacgtcgagatgatgaaagctgagaacgtctccagagc 423

                                                                       
Query: 241 tatattggttgtgcaacagaacctcaccccatttgcgaaatcgttcctccaagaactgga 300
             |||||||| | |||||||||||||| |||||||| |  || || || |||||| | ||
Sbjct: 424 ggtattggttcttcaacagaacctcactccatttgcaaggtcatttcttcaagaattaga 483

                                                                       
Query: 301 gccaaagatccacttggaggttttccaggacgccgaaatgcttataaatatcaaggaaca 360
           ||||||||||||||||||  |||||||||| |||||| ||||||||||||||||||||||
Sbjct: 484 gccaaagatccacttggaaattttccaggaagccgaattgcttataaatatcaaggaaca 543

                                                                       
Query: 361 tgttcttgttccggagcatcaagtgcttgctaacgaggaaaagaagacgttattggcgcg 420
           |||||| ||||| || ||||||||||||   || |||||||||||||| ||||||| |||
Sbjct: 544 tgttctcgttcctgaacatcaagtgcttaacaatgaggaaaagaagacattattggagcg 603

                                                                       
Query: 421 gtacactttaaaggaaactcagctaccaagaatacagattacggatcccattgcgaggta 480
           ||||||| |||||||||||||||| ||||||||||| |||||||| || ||||| |||||
Sbjct: 604 gtacactctaaaggaaactcagcttccaagaatacaaattacggaccctattgcaaggta 663

                                                                       
Query: 481 ctatggcctcaagcgagggcaggtggtgaagatcatcaggcccagcgagacagccggcag 540
           |||||||||||  ||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 664 ctatggcctcagacgaggacaggttgtgaagatcatcaggcccagcgagacagccggcag 723

                                     
Query: 541 atacgtcacatatcgctatgttgtat 566
           ||| || |||||||| ||||||||||
Sbjct: 724 atatgttacatatcgttatgttgtat 749
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>dbj|AK059963.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-F07, full
           insert sequence
          Length = 950

 Score =  545 bits (275), Expect = e-152
 Identities = 494/566 (87%), Gaps = 1/566 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgcacatgctgcgcgaccgggggtacctggtggtggagcacgagctgtccatgacccgc 60
           ||||| |||||||| ||| | ||||||||||||||||||||||||||  |||||  ||||
Sbjct: 143 atgcagatgctgcgggacagagggtacctggtggtggagcacgagctcgccatgggccgc 202

                                                                       
Query: 61  cgcgacttccagcgcaagtacggcgagnaccttccaccgcgaggacatgctcatcaacaa 120
           ||||||||||  |||||||||||||||  ||||||||||||||||| | |||||||||||
Sbjct: 203 cgcgacttcctccgcaagtacggcgagt-ccttccaccgcgaggacctcctcatcaacaa 261

                                                                       
Query: 121 gtgcaagaagaacgaccccaacgaccagatttacgtgttcttccccaacgacgagaaggt 180
           || |||||||||||| |||  ||||||||| ||||| |||||||| ||||| || |||||
Sbjct: 262 gtacaagaagaacgatccctccgaccagatatacgttttcttccctaacgatgacaaggt 321

                                                                       
Query: 181 ggggatgaagcacatcaagaagtacgttgaaatgatgaacgccgagaaagtctcaagggc 240
           ||| ||||| ||||| ||||||||||| || |||||||| || ||||| ||||| || ||
Sbjct: 322 gggaatgaaacacataaagaagtacgtcgagatgatgaaagctgagaacgtctccagagc 381

                                                                       
Query: 241 tatattggttgtgcaacagaacctcaccccatttgcgaaatcgttcctccaagaactgga 300
             |||||||| | |||||||||||||| |||||||| |  || || || |||||| | ||
Sbjct: 382 ggtattggttcttcaacagaacctcactccatttgcaaggtcatttcttcaagaattaga 441

                                                                       
Query: 301 gccaaagatccacttggaggttttccaggacgccgaaatgcttataaatatcaaggaaca 360
           ||||||||||||||||||  |||||||||| |||||| ||||||||||||||||||||||
Sbjct: 442 gccaaagatccacttggaaattttccaggaagccgaattgcttataaatatcaaggaaca 501

                                                                       
Query: 361 tgttcttgttccggagcatcaagtgcttgctaacgaggaaaagaagacgttattggcgcg 420
           |||||| ||||| || ||||||||||||   || |||||||||||||| ||||||| |||
Sbjct: 502 tgttctcgttcctgaacatcaagtgcttaacaatgaggaaaagaagacattattggagcg 561

                                                                       
Query: 421 gtacactttaaaggaaactcagctaccaagaatacagattacggatcccattgcgaggta 480
           ||||||| |||||||||||||||| ||||||||||| |||||||| || ||||| |||||
Sbjct: 562 gtacactctaaaggaaactcagcttccaagaatacaaattacggaccctattgcaaggta 621

                                                                       
Query: 481 ctatggcctcaagcgagggcaggtggtgaagatcatcaggcccagcgagacagccggcag 540
           |||||||||||  ||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 622 ctatggcctcagacgaggacaggttgtgaagatcatcaggcccagcgagacagccggcag 681

                                     
Query: 541 atacgtcacatatcgctatgttgtat 566
           ||| || |||||||| ||||||||||
Sbjct: 682 atatgttacatatcgttatgttgtat 707
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>gb|AY105601.1| Zea mays PCO088367 mRNA sequence
          Length = 1112

 Score =  454 bits (229), Expect = e-124
 Identities = 489/572 (85%), Gaps = 3/572 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgcacatgctgcgcgaccgggggtacctggtggtggagcacgagctgtccatgacccgc 60
           ||||| |||||||| ||||| || |||||||||||||| ||||||||  |||  | ||||
Sbjct: 213 atgcagatgctgcgtgaccgtggctacctggtggtggaccacgagctcgccaccagccgc 272

                                                                       
Query: 61  cgcgacttccagcgcaagtacggcgagnaccttccaccgcgaggacatgctcatcaacaa 120
           ||||||||||  ||||||| |||||||  ||||||||||||||||| | |||||||||||
Sbjct: 273 cgcgacttcctccgcaagttcggcgagt-ccttccaccgcgaggacctcctcatcaacaa 331

                                                                       
Query: 121 gtgcaagaagaacgaccccaacgaccagatttacgtgttcttccccaacgacgagaaggt 180
           || |||||||||||||||   ||||||||| || || |||||||||||||| || |||||
Sbjct: 332 gtacaagaagaacgacccatccgaccagatatatgtcttcttccccaacgatgacaaggt 391

                                                                       
Query: 181 ggggatgaagcacatcaagaagtacgttgaaatgatgaacgc-cgagaaagtctcaaggg 239
            |||||||||||||||||||||||||| |||||||||| ||| |||||| ||||| || |
Sbjct: 392 agggatgaagcacatcaagaagtacgtcgaaatgatga-cgcacgagaacgtctccagag 450

                                                                       
Query: 240 ctatattggttgtgcaacagaacctcaccccatttgcgaaatcgttcctccaagaactgg 299
           || |  ||||| | || |||||||| || || |||||||| ||||| |||  ||| ||||
Sbjct: 451 ctgtgctggttctccagcagaacctaactccgtttgcgaagtcgtttctcatagagctgg 510

                                                                       
Query: 300 agccaaagatccacttggaggttttccaggacgccgaaatgcttataaatatcaaggaac 359
           |||| ||||||||  ||||  |||||||||| ||||| ||||||||||| ||||||||||
Sbjct: 511 agccgaagatccatctggaaattttccaggaggccgagatgcttataaacatcaaggaac 570

                                                                       
Query: 360 atgttcttgttccggagcatcaagtgcttgctaacgaggaaaagaagacgttattggcgc 419
           |||| |||||||| |||||||| |||||  | |||||||| ||||||||| |  ||| ||
Sbjct: 571 atgtccttgttcctgagcatcaggtgctcacaaacgaggagaagaagacgcttctggagc 630

                                                                       
Query: 420 ggtacactttaaaggaaactcagctaccaagaatacagattacggatcccattgcgaggt 479
           ||||||| || |||||||||||||| |||||||||||||| |||||||| ||||| ||||
Sbjct: 631 ggtacaccttgaaggaaactcagcttccaagaatacagatcacggatcctattgctaggt 690

                                                                       
Query: 480 actatggcctcaagcgagggcaggtggtgaagatcatcaggcccagcgagacagccggca 539
           |||| ||||| | |||||| ||||| |||||||||||||||||||||||||| || ||||
Sbjct: 691 actacggcctgaggcgaggccaggtcgtgaagatcatcaggcccagcgagacggcgggca 750

                                           
Query: 540 gatacgtcacatatcgctatgttgtatgacag 571
           ||||||| ||||| || || ||||||||||||
Sbjct: 751 gatacgttacataccggtacgttgtatgacag 782
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  155 bits (78), Expect = 2e-34
 Identities = 114/126 (90%)
 Strand = Plus / Minus

                                                                            
Query: 441      agctaccaagaatacagattacggatcccattgcgaggtactatggcctcaagcgagggc 500
                |||| ||||||||||| |||||||| || ||||| ||||||||||||||||  ||||| |
Sbjct: 34157366 agcttccaagaatacaaattacggaccctattgcaaggtactatggcctcagacgaggac 34157307

                                                                            
Query: 501      aggtggtgaagatcatcaggcccagcgagacagccggcagatacgtcacatatcgctatg 560
                |||| |||||||||||||||||||||||||||||||||||||| || |||||||| ||||
Sbjct: 34157306 aggttgtgaagatcatcaggcccagcgagacagccggcagatatgttacatatcgttatg 34157247

                      
Query: 561      ttgtat 566
                ||||||
Sbjct: 34157246 ttgtat 34157241



 Score =  145 bits (73), Expect = 2e-31
 Identities = 130/148 (87%), Gaps = 1/148 (0%)
 Strand = Plus / Minus

                                                                            
Query: 1        atgcacatgctgcgcgaccgggggtacctggtggtggagcacgagctgtccatgacccgc 60
                ||||| |||||||| ||| | ||||||||||||||||||||||||||  |||||  ||||
Sbjct: 34159458 atgcagatgctgcgggacagagggtacctggtggtggagcacgagctcgccatgggccgc 34159399

                                                                            
Query: 61       cgcgacttccagcgcaagtacggcgagnaccttccaccgcgaggacatgctcatcaacaa 120
                ||||||||||  |||||||||||||||  ||||||||||||||||| | |||||||||||
Sbjct: 34159398 cgcgacttcctccgcaagtacggcgagt-ccttccaccgcgaggacctcctcatcaacaa 34159340

                                            
Query: 121      gtgcaagaagaacgaccccaacgaccag 148
                || |||||||||||| |||  |||||||
Sbjct: 34159339 gtacaagaagaacgatccctccgaccag 34159312



 Score =  135 bits (68), Expect = 2e-28
 Identities = 104/116 (89%)
 Strand = Plus / Minus

                                                                            
Query: 327      aggacgccgaaatgcttataaatatcaaggaacatgttcttgttccggagcatcaagtgc 386
                |||| |||||| |||||||||||||||||||||||||||| ||||| || ||||||||||
Sbjct: 34158261 aggaagccgaattgcttataaatatcaaggaacatgttctcgttcctgaacatcaagtgc 34158202

                                                                        
Query: 387      ttgctaacgaggaaaagaagacgttattggcgcggtacactttaaaggaaactcag 442
                ||   || |||||||||||||| ||||||| |||||||||| ||||||||||||||
Sbjct: 34158201 ttaacaatgaggaaaagaagacattattggagcggtacactctaaaggaaactcag 34158146



 Score =  127 bits (64), Expect = 4e-26
 Identities = 154/184 (83%)
 Strand = Plus / Minus

                                                                            
Query: 146      cagatttacgtgttcttccccaacgacgagaaggtggggatgaagcacatcaagaagtac 205
                ||||| ||||| |||||||| ||||| || |||||||| ||||| ||||| |||||||||
Sbjct: 34158572 cagatatacgttttcttccctaacgatgacaaggtgggaatgaaacacataaagaagtac 34158513

                                                                            
Query: 206      gttgaaatgatgaacgccgagaaagtctcaagggctatattggttgtgcaacagaacctc 265
                || || |||||||| || ||||| ||||| || ||  |||||||| | ||||||||||||
Sbjct: 34158512 gtcgagatgatgaaagctgagaacgtctccagagcggtattggttcttcaacagaacctc 34158453

                                                                            
Query: 266      accccatttgcgaaatcgttcctccaagaactggagccaaagatccacttggaggttttc 325
                || |||||||| |  || || || |||||| | ||||||||||||||||||||  |||||
Sbjct: 34158452 actccatttgcaaggtcatttcttcaagaattagagccaaagatccacttggaaattttc 34158393

                    
Query: 326      cagg 329
                ||||
Sbjct: 34158392 cagg 34158389
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>dbj|AP003232.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0034E02
          Length = 165497

 Score =  155 bits (78), Expect = 2e-34
 Identities = 114/126 (90%)
 Strand = Plus / Minus

                                                                          
Query: 441    agctaccaagaatacagattacggatcccattgcgaggtactatggcctcaagcgagggc 500
              |||| ||||||||||| |||||||| || ||||| ||||||||||||||||  ||||| |
Sbjct: 153844 agcttccaagaatacaaattacggaccctattgcaaggtactatggcctcagacgaggac 153785

                                                                          
Query: 501    aggtggtgaagatcatcaggcccagcgagacagccggcagatacgtcacatatcgctatg 560
              |||| |||||||||||||||||||||||||||||||||||||| || |||||||| ||||
Sbjct: 153784 aggttgtgaagatcatcaggcccagcgagacagccggcagatatgttacatatcgttatg 153725

                    
Query: 561    ttgtat 566
              ||||||
Sbjct: 153724 ttgtat 153719



 Score =  145 bits (73), Expect = 2e-31
 Identities = 130/148 (87%), Gaps = 1/148 (0%)
 Strand = Plus / Minus

                                                                          
Query: 1      atgcacatgctgcgcgaccgggggtacctggtggtggagcacgagctgtccatgacccgc 60
              ||||| |||||||| ||| | ||||||||||||||||||||||||||  |||||  ||||
Sbjct: 155936 atgcagatgctgcgggacagagggtacctggtggtggagcacgagctcgccatgggccgc 155877

                                                                          
Query: 61     cgcgacttccagcgcaagtacggcgagnaccttccaccgcgaggacatgctcatcaacaa 120
              ||||||||||  |||||||||||||||  ||||||||||||||||| | |||||||||||
Sbjct: 155876 cgcgacttcctccgcaagtacggcgagt-ccttccaccgcgaggacctcctcatcaacaa 155818

                                          
Query: 121    gtgcaagaagaacgaccccaacgaccag 148
              || |||||||||||| |||  |||||||
Sbjct: 155817 gtacaagaagaacgatccctccgaccag 155790



 Score =  135 bits (68), Expect = 2e-28
 Identities = 104/116 (89%)
 Strand = Plus / Minus

                                                                          
Query: 327    aggacgccgaaatgcttataaatatcaaggaacatgttcttgttccggagcatcaagtgc 386
              |||| |||||| |||||||||||||||||||||||||||| ||||| || ||||||||||
Sbjct: 154739 aggaagccgaattgcttataaatatcaaggaacatgttctcgttcctgaacatcaagtgc 154680

                                                                      
Query: 387    ttgctaacgaggaaaagaagacgttattggcgcggtacactttaaaggaaactcag 442
              ||   || |||||||||||||| ||||||| |||||||||| ||||||||||||||
Sbjct: 154679 ttaacaatgaggaaaagaagacattattggagcggtacactctaaaggaaactcag 154624



 Score =  127 bits (64), Expect = 4e-26
 Identities = 154/184 (83%)
 Strand = Plus / Minus

                                                                          
Query: 146    cagatttacgtgttcttccccaacgacgagaaggtggggatgaagcacatcaagaagtac 205
              ||||| ||||| |||||||| ||||| || |||||||| ||||| ||||| |||||||||
Sbjct: 155050 cagatatacgttttcttccctaacgatgacaaggtgggaatgaaacacataaagaagtac 154991

                                                                          
Query: 206    gttgaaatgatgaacgccgagaaagtctcaagggctatattggttgtgcaacagaacctc 265
              || || |||||||| || ||||| ||||| || ||  |||||||| | ||||||||||||
Sbjct: 154990 gtcgagatgatgaaagctgagaacgtctccagagcggtattggttcttcaacagaacctc 154931

                                                                          
Query: 266    accccatttgcgaaatcgttcctccaagaactggagccaaagatccacttggaggttttc 325
              || |||||||| |  || || || |||||| | ||||||||||||||||||||  |||||
Sbjct: 154930 actccatttgcaaggtcatttcttcaagaattagagccaaagatccacttggaaattttc 154871

                  
Query: 326    cagg 329
              ||||
Sbjct: 154870 cagg 154867
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>gb|DQ213090.1| Taeniopygia guttata clone 0058P0012G03 DNA directed RNA polymerase
           II polypeptide E-like mRNA, complete sequence
          Length = 920

 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 53/59 (89%)
 Strand = Plus / Plus

                                                                      
Query: 491 aagcgagggcaggtggtgaagatcatcaggcccagcgagacagccggcagatacgtcac 549
           ||||| || ||||| ||||||||||||||||||||||||||||| ||||| ||| ||||
Sbjct: 567 aagcgtggccaggtagtgaagatcatcaggcccagcgagacagcgggcaggtacatcac 625
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>ref|XM_512960.1| PREDICTED: Pan troglodytes similar to DNA-directed RNA polymerase
           II 23 kDa polypeptide (RPB25) (RPB5) (RPABC1) (XAP4)
           (LOC456359), mRNA
          Length = 686

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                      
Query: 491 aagcgagggcaggtggtgaagatcatcaggcccagcgagacagccggcagatacgtcac 549
           ||||| ||||||||||||||||||||| ||||||| ||||| || ||||| ||| ||||
Sbjct: 589 aagcgtgggcaggtggtgaagatcatccggcccagtgagacggctggcaggtacatcac 647
to top
>gb|BC034144.1| Homo sapiens polymerase (RNA) II (DNA directed) polypeptide E,
           25kDa, mRNA (cDNA clone MGC:32760 IMAGE:4617000),
           complete cds
          Length = 1284

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                      
Query: 491 aagcgagggcaggtggtgaagatcatcaggcccagcgagacagccggcagatacgtcac 549
           ||||| ||||||||||||||||||||| ||||||| ||||| || ||||| ||| ||||
Sbjct: 598 aagcgtgggcaggtggtgaagatcatccggcccagtgagacggctggcaggtacatcac 656
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>gb|BC004441.1| Homo sapiens polymerase (RNA) II (DNA directed) polypeptide E,
           25kDa, mRNA (cDNA clone MGC:4035 IMAGE:2820565),
           complete cds
          Length = 1248

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                      
Query: 491 aagcgagggcaggtggtgaagatcatcaggcccagcgagacagccggcagatacgtcac 549
           ||||| ||||||||||||||||||||| ||||||| ||||| || ||||| ||| ||||
Sbjct: 578 aagcgtgggcaggtggtgaagatcatccggcccagtgagacggctggcaggtacatcac 636
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>dbj|AK122813.1| Homo sapiens cDNA FLJ16409 fis, clone BLADE2002972, highly  similar
            to DNA-DIRECTED RNA POLYMERASE II 23 KDA POLYPEPTIDE (EC
            2.7.7.6)
          Length = 2440

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                       
Query: 491  aagcgagggcaggtggtgaagatcatcaggcccagcgagacagccggcagatacgtcac 549
            ||||| ||||||||||||||||||||| ||||||| ||||| || ||||| ||| ||||
Sbjct: 1795 aagcgtgggcaggtggtgaagatcatccggcccagtgagacggctggcaggtacatcac 1853
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>gb|S42643.1| RNA polymerase II [human, mRNA, 144 nt]
          Length = 144

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                      
Query: 491 aagcgagggcaggtggtgaagatcatcaggcccagcgagacagccggcagatacgtcac 549
           ||||| ||||||||||||||||||||| ||||||| ||||| || ||||| ||| ||||
Sbjct: 70  aagcgtgggcaggtggtgaagatcatccggcccagtgagacggctggcaggtacatcac 128
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>ref|NM_002695.2| Homo sapiens polymerase (RNA) II (DNA directed) polypeptide E,
           25kDa (POLR2E), mRNA
          Length = 1238

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                      
Query: 491 aagcgagggcaggtggtgaagatcatcaggcccagcgagacagccggcagatacgtcac 549
           ||||| ||||||||||||||||||||| ||||||| ||||| || ||||| ||| ||||
Sbjct: 578 aagcgtgggcaggtggtgaagatcatccggcccagtgagacggctggcaggtacatcac 636
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>gb|J04965.1|HUMRNAPII Human RNA polymerase II 23kD subunit (POLR2) mRNA, complete cds
          Length = 1212

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                      
Query: 491 aagcgagggcaggtggtgaagatcatcaggcccagcgagacagccggcagatacgtcac 549
           ||||| ||||||||||||||||||||| ||||||| ||||| || ||||| ||| ||||
Sbjct: 580 aagcgtgggcaggtggtgaagatcatccggcccagtgagacggctggcaggtacatcac 638
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>ref|NM_113130.2| Arabidopsis thaliana ATRPABC24.3; DNA binding / DNA-directed RNA
           polymerase AT3G22320 (ATRPABC24.3) mRNA, complete cds
          Length = 896

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 60/70 (85%)
 Strand = Plus / Plus

                                                                       
Query: 315 tggaggttttccaggacgccgaaatgcttataaatatcaaggaacatgttcttgttccgg 374
           |||| ||||||||||| || ||||||||  | || || || ||||||||||||||||| |
Sbjct: 484 tggaagttttccaggaggcggaaatgctagtgaacattaaagaacatgttcttgttcctg 543

                     
Query: 375 agcatcaagt 384
           ||||||||||
Sbjct: 544 agcatcaagt 553



 Score = 44.1 bits (22), Expect = 0.50
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 239 gctatattggttgtgcaacagaacctcaccccatttgc 276
           ||||| |||||||||||||||||| | ||||| |||||
Sbjct: 408 gctattttggttgtgcaacagaacttgaccccgtttgc 445
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>gb|AF412101.1|AF412101 Arabidopsis thaliana AT3g22320/MCB17_5 mRNA, complete cds
          Length = 898

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 60/70 (85%)
 Strand = Plus / Plus

                                                                       
Query: 315 tggaggttttccaggacgccgaaatgcttataaatatcaaggaacatgttcttgttccgg 374
           |||| ||||||||||| || ||||||||  | || || || ||||||||||||||||| |
Sbjct: 485 tggaagttttccaggaggcggaaatgctagtgaacattaaagaacatgttcttgttcctg 544

                     
Query: 375 agcatcaagt 384
           ||||||||||
Sbjct: 545 agcatcaagt 554



 Score = 44.1 bits (22), Expect = 0.50
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 239 gctatattggttgtgcaacagaacctcaccccatttgc 276
           ||||| |||||||||||||||||| | ||||| |||||
Sbjct: 409 gctattttggttgtgcaacagaacttgaccccgtttgc 446
to top
>gb|AF370551.1|AF370551 Arabidopsis thaliana RNA polymerase I, II and III 24.3 kDa subunit
           (MCB17.4) mRNA, complete cds
          Length = 895

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 60/70 (85%)
 Strand = Plus / Plus

                                                                       
Query: 315 tggaggttttccaggacgccgaaatgcttataaatatcaaggaacatgttcttgttccgg 374
           |||| ||||||||||| || ||||||||  | || || || ||||||||||||||||| |
Sbjct: 484 tggaagttttccaggaggcggaaatgctagtgaacattaaagaacatgttcttgttcctg 543

                     
Query: 375 agcatcaagt 384
           ||||||||||
Sbjct: 544 agcatcaagt 553



 Score = 44.1 bits (22), Expect = 0.50
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 239 gctatattggttgtgcaacagaacctcaccccatttgc 276
           ||||| |||||||||||||||||| | ||||| |||||
Sbjct: 408 gctattttggttgtgcaacagaacttgaccccgtttgc 445
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>gb|AY086150.1| Arabidopsis thaliana clone 21828 mRNA, complete sequence
          Length = 877

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 60/70 (85%)
 Strand = Plus / Plus

                                                                       
Query: 315 tggaggttttccaggacgccgaaatgcttataaatatcaaggaacatgttcttgttccgg 374
           |||| ||||||||||| || ||||||||  | || || || ||||||||||||||||| |
Sbjct: 484 tggaagttttccaggaggcggaaatgctagtgaacattaaagaacatgttcttgttcctg 543

                     
Query: 375 agcatcaagt 384
           ||||||||||
Sbjct: 544 agcatcaagt 553



 Score = 44.1 bits (22), Expect = 0.50
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 239 gctatattggttgtgcaacagaacctcaccccatttgc 276
           ||||| |||||||||||||||||| | ||||| |||||
Sbjct: 408 gctattttggttgtgcaacagaacttgaccccgtttgc 445
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>ref|XM_216839.3| PREDICTED: Rattus norvegicus polymerase (RNA) II (DNA directed)
           polypeptide E (predicted) (Polr2e_predicted), mRNA
          Length = 666

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                             
Query: 489 tcaagcgagggcaggtggtgaagatcatcaggcccagcgagacagccggc 538
           |||||||||||||||| |||||||| ||| | ||||| ||||||||||||
Sbjct: 587 tcaagcgagggcaggttgtgaagattatccgccccagtgagacagccggc 636
to top
>gb|BT002130.1| Arabidopsis thaliana RNA polymerase I, II and III 24.3 kDa subunit
           (At3g22310) mRNA, complete cds
          Length = 651

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 60/70 (85%)
 Strand = Plus / Plus

                                                                       
Query: 315 tggaggttttccaggacgccgaaatgcttataaatatcaaggaacatgttcttgttccgg 374
           |||| ||||||||||| || ||||||||  | || || || ||||||||||||||||| |
Sbjct: 365 tggaagttttccaggaggcggaaatgctagtgaacattaaagaacatgttcttgttcctg 424

                     
Query: 375 agcatcaagt 384
           ||||||||||
Sbjct: 425 agcatcaagt 434



 Score = 44.1 bits (22), Expect = 0.50
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 239 gctatattggttgtgcaacagaacctcaccccatttgc 276
           ||||| |||||||||||||||||| | ||||| |||||
Sbjct: 289 gctattttggttgtgcaacagaacttgaccccgtttgc 326
to top
>gb|AF019248.1|AF019248 Arabidopsis thaliana RNA polymerase I, II and III 24.3 kDa subunit
           (AtRPABC24.3) mRNA, complete cds
          Length = 903

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 60/70 (85%)
 Strand = Plus / Plus

                                                                       
Query: 315 tggaggttttccaggacgccgaaatgcttataaatatcaaggaacatgttcttgttccgg 374
           |||| ||||||||||| || ||||||||  | || || || ||||||||||||||||| |
Sbjct: 479 tggaagttttccaggaggcggaaatgctagtgaacattaaagaacatgttcttgttcctg 538

                     
Query: 375 agcatcaagt 384
           ||||||||||
Sbjct: 539 agcatcaagt 548



 Score = 44.1 bits (22), Expect = 0.50
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 239 gctatattggttgtgcaacagaacctcaccccatttgc 276
           ||||| |||||||||||||||||| | ||||| |||||
Sbjct: 403 gctattttggttgtgcaacagaacttgaccccgtttgc 440
to top
>dbj|D38251.1|HUMRPB5 Homo sapiens mRNA for RPB5 (XAP4), complete cds
          Length = 1254

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                
Query: 497 gggcaggtggtgaagatcatcaggcccagcgagacagccggcagatacgtcac 549
           ||||||||||||||||||||| ||||||| ||||| || ||||| ||| ||||
Sbjct: 592 gggcaggtggtgaagatcatccggcccagtgagacggctggcaggtacatcac 644
to top
>ref|XM_993991.1| PREDICTED: Mus musculus polymerase (RNA) II (DNA directed)
           polypeptide E, transcript variant 1 (Polr2e), mRNA
          Length = 744

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                      
Query: 489 tcaagcgagggcaggtggtgaagatcatcaggcccagcgagac 531
           |||||||||||||||| |||||||||||| | ||||| |||||
Sbjct: 655 tcaagcgagggcaggtcgtgaagatcatccgccccagtgagac 697
to top
>ref|XM_282920.4| PREDICTED: Mus musculus polymerase (RNA) II (DNA directed)
           polypeptide E, transcript variant 1 (Polr2e), mRNA
          Length = 744

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                      
Query: 489 tcaagcgagggcaggtggtgaagatcatcaggcccagcgagac 531
           |||||||||||||||| |||||||||||| | ||||| |||||
Sbjct: 655 tcaagcgagggcaggtcgtgaagatcatccgccccagtgagac 697
to top
>ref|XM_914488.2| PREDICTED: Mus musculus polymerase (RNA) II (DNA directed)
           polypeptide E, transcript variant 5 (Polr2e), mRNA
          Length = 744

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                      
Query: 489 tcaagcgagggcaggtggtgaagatcatcaggcccagcgagac 531
           |||||||||||||||| |||||||||||| | ||||| |||||
Sbjct: 655 tcaagcgagggcaggtcgtgaagatcatccgccccagtgagac 697
to top
>emb|CR860977.1| Pongo pygmaeus mRNA; cDNA DKFZp459G0627 (from clone DKFZp459G0627)
          Length = 1312

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                      
Query: 491 aagcgagggcaggtggtgaagatcatcaggcccagcgagacagccggcagatacgtcac 549
           ||||| ||||||||||||||||||||| | ||||| ||||| || ||||| ||| ||||
Sbjct: 602 aagcgtgggcaggtggtgaagatcatccgacccagtgagacggcgggcaggtacatcac 660
to top
>ref|NM_001038093.1| Bos taurus polymerase (RNA) II (DNA directed) polypeptide E, 25kDa
           (POLR2E), mRNA
          Length = 1441

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                      
Query: 491 aagcgagggcaggtggtgaagatcatcaggcccagcgagacagccggcagatacgtcac 549
           ||||| || |||||||||||||||||| |||| |||||||| || ||||| ||| ||||
Sbjct: 630 aagcgcggacaggtggtgaagatcatccggccgagcgagactgcgggcaggtacatcac 688
to top
>dbj|AK145201.1| Mus musculus mammary gland RCB-0527 Jyg-MC(B) cDNA, RIKEN
           full-length enriched library, clone:G930018N02
           product:polymerase (RNA) II (DNA directed) polypeptide
           E, full insert sequence
          Length = 1072

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                      
Query: 489 tcaagcgagggcaggtggtgaagatcatcaggcccagcgagac 531
           |||||||||||||||| |||||||||||| | ||||| |||||
Sbjct: 638 tcaagcgagggcaggtcgtgaagatcatccgccccagtgagac 680
to top
>dbj|AK132109.1| Mus musculus 13 days embryo head cDNA, RIKEN full-length enriched
           library, clone:3110030A22 product:polymerase (RNA) II
           (DNA directed) polypeptide E, full insert sequence
          Length = 1059

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                      
Query: 489 tcaagcgagggcaggtggtgaagatcatcaggcccagcgagac 531
           |||||||||||||||| |||||||||||| | ||||| |||||
Sbjct: 629 tcaagcgagggcaggtcgtgaagatcatccgccccagtgagac 671
to top
>dbj|AK144668.1| Mus musculus lung RCB-0558 LLC cDNA, RIKEN full-length enriched
           library, clone:G730021L05 product:polymerase (RNA) II
           (DNA directed) polypeptide E, full insert sequence
          Length = 1065

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                      
Query: 489 tcaagcgagggcaggtggtgaagatcatcaggcccagcgagac 531
           |||||||||||||||| |||||||||||| | ||||| |||||
Sbjct: 635 tcaagcgagggcaggtcgtgaagatcatccgccccagtgagac 677
to top
>dbj|AK088610.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN
           full-length enriched library, clone:E430021J08
           product:DNA-DIRECTED RNA POLYMERASE II 23 KDA
           POLYPEPTIDE (EC 2.7.7.6) (RPB25) (XAP4) (RPB5) homolog
           [Homo sapiens], full insert sequence
          Length = 1061

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                      
Query: 489 tcaagcgagggcaggtggtgaagatcatcaggcccagcgagac 531
           |||||||||||||||| |||||||||||| | ||||| |||||
Sbjct: 631 tcaagcgagggcaggtcgtgaagatcatccgccccagtgagac 673
to top
>gb|BC111280.1| Bos taurus cDNA clone MGC:134612 IMAGE:8067228, complete cds
          Length = 1441

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                      
Query: 491 aagcgagggcaggtggtgaagatcatcaggcccagcgagacagccggcagatacgtcac 549
           ||||| || |||||||||||||||||| |||| |||||||| || ||||| ||| ||||
Sbjct: 630 aagcgcggacaggtggtgaagatcatccggccgagcgagactgcgggcaggtacatcac 688
to top
>dbj|AK015823.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:4930518E05 product:polymerase (RNA) II
           (DNA directed) polypeptide E, full insert sequence
          Length = 1009

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                      
Query: 489 tcaagcgagggcaggtggtgaagatcatcaggcccagcgagac 531
           |||||||||||||||| |||||||||||| | ||||| |||||
Sbjct: 572 tcaagcgagggcaggtcgtgaagatcatccgccccagtgagac 614
to top
>gb|AC004151.1|AC004151 Homo sapiens chromosome 19, cosmid R28738, complete sequence
          Length = 35116

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                                
Query: 499   gcaggtggtgaagatcatcaggcccagcgagacagccggcagatacgtcac 549
             ||||||||||||||||||| ||||||| ||||| || ||||| ||| ||||
Sbjct: 17258 gcaggtggtgaagatcatccggcccagtgagacggctggcaggtacatcac 17208
to top
>gb|BC005599.1| Mus musculus cDNA clone IMAGE:3482525, containing frame-shift
           errors
          Length = 1084

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                      
Query: 489 tcaagcgagggcaggtggtgaagatcatcaggcccagcgagac 531
           |||||||||||||||| |||||||||||| | ||||| |||||
Sbjct: 626 tcaagcgagggcaggtcgtgaagatcatccgccccagtgagac 668
to top
>gb|BC045521.1| Mus musculus polymerase (RNA) II (DNA directed) polypeptide E,
           transcript variant 1, mRNA (cDNA clone MGC:56729
           IMAGE:2647754), complete cds
          Length = 1022

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                      
Query: 489 tcaagcgagggcaggtggtgaagatcatcaggcccagcgagac 531
           |||||||||||||||| |||||||||||| | ||||| |||||
Sbjct: 574 tcaagcgagggcaggtcgtgaagatcatccgccccagtgagac 616
to top
>gb|BC037681.1| Mus musculus polymerase (RNA) II (DNA directed) polypeptide E, mRNA
            (cDNA clone IMAGE:3156885), complete cds
          Length = 2429

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                       
Query: 489  tcaagcgagggcaggtggtgaagatcatcaggcccagcgagac 531
            |||||||||||||||| |||||||||||| | ||||| |||||
Sbjct: 1969 tcaagcgagggcaggtcgtgaagatcatccgccccagtgagac 2011
to top
>dbj|AP001889.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-344L21, complete
             sequence
          Length = 186656

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                               
Query: 497   gggcaggtggtgaagatcatcaggcccagcgaga 530
             |||||||| |||||||||||| ||||||||||||
Sbjct: 52037 gggcaggtagtgaagatcatccggcccagcgaga 52070
to top
>ref|XM_418224.1| PREDICTED: Gallus gallus similar to DNA-directed RNA polymerase II
           23 kDa polypeptide (RPB25) (XAP4) (RPB5) (RPABC1)
           (LOC420103), mRNA
          Length = 880

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                    
Query: 491 aagcgagggcaggtggtgaagatcatcaggcccagcgagac 531
           |||||||| ||||||||||||||||| || ||||| |||||
Sbjct: 505 aagcgaggccaggtggtgaagatcataagacccagtgagac 545
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>emb|BX935442.2| Gallus gallus finished cDNA, clone ChEST254l2
          Length = 939

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                    
Query: 491 aagcgagggcaggtggtgaagatcatcaggcccagcgagac 531
           |||||||| ||||||||||||||||| || ||||| |||||
Sbjct: 566 aagcgaggccaggtggtgaagatcataagacccagtgagac 606
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>emb|BX935423.2| Gallus gallus finished cDNA, clone ChEST505h16
          Length = 951

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                    
Query: 491 aagcgagggcaggtggtgaagatcatcaggcccagcgagac 531
           |||||||| ||||||||||||||||| || ||||| |||||
Sbjct: 578 aagcgaggccaggtggtgaagatcataagacccagtgagac 618
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>emb|CR385484.1| Gallus gallus finished cDNA, clone ChEST974k21
          Length = 930

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                    
Query: 491 aagcgagggcaggtggtgaagatcatcaggcccagcgagac 531
           |||||||| ||||||||||||||||| || ||||| |||||
Sbjct: 554 aagcgaggccaggtggtgaagatcataagacccagtgagac 594
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>emb|BX930905.2| Gallus gallus finished cDNA, clone ChEST967e2
          Length = 947

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                    
Query: 491 aagcgagggcaggtggtgaagatcatcaggcccagcgagac 531
           |||||||| ||||||||||||||||| || ||||| |||||
Sbjct: 574 aagcgaggccaggtggtgaagatcataagacccagtgagac 614
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>emb|BX929663.1| Gallus gallus finished cDNA, clone ChEST799b22
          Length = 953

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                    
Query: 491 aagcgagggcaggtggtgaagatcatcaggcccagcgagac 531
           |||||||| ||||||||||||||||| || ||||| |||||
Sbjct: 575 aagcgaggccaggtggtgaagatcataagacccagtgagac 615
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>dbj|AB022215.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MCB17
          Length = 83205

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                          
Query: 356   gaacatgttcttgttccggagcatcaagt 384
             ||||||||||||||||| |||||||||||
Sbjct: 11593 gaacatgttcttgttcctgagcatcaagt 11565



 Score = 44.1 bits (22), Expect = 0.50
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                   
Query: 239   gctatattggttgtgcaacagaacctcaccccatttgc 276
             ||||| |||||||||||||||||| | ||||| |||||
Sbjct: 11801 gctattttggttgtgcaacagaacttgaccccgtttgc 11764
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>ref|NM_112541.1| Arabidopsis thaliana DNA binding / DNA-directed RNA polymerase
           AT3G16680 mRNA, complete cds
          Length = 613

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 353 aaggaacatgttcttgttccggagcatcaag 383
           |||||||||||| ||||||| ||||||||||
Sbjct: 400 aaggaacatgtttttgttcctgagcatcaag 430
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>dbj|AK010567.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library,
           clone:2410021N14 product:polymerase (RNA) II (DNA
           directed) polypeptide E, full insert sequence
          Length = 1018

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                      
Query: 489 tcaagcgagggcaggtggtgaagatcatcaggcccagcgagac 531
           ||||||||||| |||| |||||||||||| | ||||| |||||
Sbjct: 582 tcaagcgaggggaggtcgtgaagatcatccgccccagtgagac 624
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>dbj|AB022217.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MGL6
          Length = 79459

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                            
Query: 353   aaggaacatgttcttgttccggagcatcaag 383
             |||||||||||| ||||||| ||||||||||
Sbjct: 49998 aaggaacatgtttttgttcctgagcatcaag 50028
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>gb|BT014445.1| Lycopersicon esculentum clone 133771F, mRNA sequence
          Length = 1001

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 303 caaagatccacttggaggttttccaggacgccgaaatg 340
           ||||| |||||||||||||||| ||||| || ||||||
Sbjct: 511 caaagttccacttggaggtttttcaggaggcagaaatg 548
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>gb|AC150387.2| Branchiostoma floridae clone CH302-103N24, complete sequence
          Length = 193376

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                     
Query: 491  aagcgagggcaggtggtgaagatcatcaggcccagcgagac 531
            ||||| ||||||||||||||||| ||  | |||||||||||
Sbjct: 6012 aagcgcgggcaggtggtgaagattatacgtcccagcgagac 6052
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>ref|XM_472957.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 618

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                
Query: 142 cgaccagatttacgtgttcttccccaacgacgagaag 178
           ||||||||| ||||| ||||||||||| |||| ||||
Sbjct: 192 cgaccagatctacgtcttcttccccaaggacgcgaag 228
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>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 68      tccagcgcaagtacggcgagnacc 91
               |||||||||||||||||||| |||
Sbjct: 1865706 tccagcgcaagtacggcgaggacc 1865729
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>dbj|AK100492.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023098I05, full
           insert sequence
          Length = 2658

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                
Query: 142 cgaccagatttacgtgttcttccccaacgacgagaag 178
           ||||||||| ||||| ||||||||||| |||| ||||
Sbjct: 276 cgaccagatctacgtcttcttccccaaggacgcgaag 312
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>ref|XM_515897.1| PREDICTED: Pan troglodytes similar to BC004636 protein (LOC459730),
            mRNA
          Length = 2003

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 337  aatgcttataaatatcaaggaaca 360
            |||||||||||| |||||||||||
Sbjct: 1355 aatgcttataaaaatcaaggaaca 1332
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>ref|XM_524797.1| PREDICTED: Pan troglodytes potassium voltage-gated channel,
           shaker-related subfamily, member 3 (LOC469412), mRNA
          Length = 1728

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 56  cccgccgcgacttccagcgc 75
           ||||||||||||||||||||
Sbjct: 635 cccgccgcgacttccagcgc 654
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>ref|NM_024770.1| Homo sapiens methyltransferase like 8 (METTL8), mRNA
          Length = 2247

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 337  aatgcttataaatatcaaggaaca 360
            |||||||||||| |||||||||||
Sbjct: 1599 aatgcttataaaaatcaaggaaca 1576
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>gb|AC115860.9| Mus musculus chromosome 1, clone RP24-290C11, complete sequence
          Length = 240785

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 254   caacagaacctcaccccatt 273
             ||||||||||||||||||||
Sbjct: 14339 caacagaacctcaccccatt 14358
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>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome
          Length = 3928089

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 9       gctgcgcgaccgggggtacctggt 32
               ||||||||||||||| ||||||||
Sbjct: 1380523 gctgcgcgaccggggctacctggt 1380546
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>gb|BC064595.1| Homo sapiens cDNA clone IMAGE:5755761, partial cds
          Length = 2353

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 56  cccgccgcgacttccagcgc 75
           ||||||||||||||||||||
Sbjct: 582 cccgccgcgacttccagcgc 601
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>ref|XM_754890.1| Ustilago maydis 521 hypothetical protein (UM03836.1) partial mRNA
          Length = 1665

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 500 caggtggtgaagatcatcaggcccagcgagac 531
           |||||||| ||||| ||||||||||| |||||
Sbjct: 486 caggtggtcaagattatcaggcccagtgagac 517
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>gb|AC116709.4| Mus musculus chromosome 1, clone RP23-91L14, complete sequence
          Length = 188848

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 254   caacagaacctcaccccatt 273
             ||||||||||||||||||||
Sbjct: 69823 caacagaacctcaccccatt 69804
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>gb|BC035059.1| Homo sapiens potassium voltage-gated channel, shaker-related
           subfamily, member 3, mRNA (cDNA clone MGC:41884
           IMAGE:5261639), complete cds
          Length = 2587

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 56  cccgccgcgacttccagcgc 75
           ||||||||||||||||||||
Sbjct: 860 cccgccgcgacttccagcgc 879
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>emb|AL365361.12| Human DNA sequence from clone RP11-284N8 on chromosome 1 Contains the
              KCNA2 gene for a potassium voltage-gated channel from the
              shaker-related subfamily member 2, the KCNA3 gene for a
              potassium voltage-gated channel from the shaker-related
              subfamily member 3 and two CpG islands, complete sequence
          Length = 193182

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 56     cccgccgcgacttccagcgc 75
              ||||||||||||||||||||
Sbjct: 121045 cccgccgcgacttccagcgc 121026
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>gb|AF192980.2| Trypanosoma cruzi flagellar calcium binding protein 3 mRNA,
           complete cds
          Length = 844

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 240 ctatattggttgtgcaacag 259
           ||||||||||||||||||||
Sbjct: 8   ctatattggttgtgcaacag 27
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>dbj|AK124092.1| Homo sapiens cDNA FLJ42098 fis, clone TESOP2006041
          Length = 1922

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 337  aatgcttataaatatcaaggaaca 360
            |||||||||||| |||||||||||
Sbjct: 1811 aatgcttataaaaatcaaggaaca 1788
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>dbj|AK093218.1| Homo sapiens cDNA FLJ35899 fis, clone TESTI2009544, moderately
            similar to Probable membrane protein YOR240w
          Length = 1880

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 337  aatgcttataaatatcaaggaaca 360
            |||||||||||| |||||||||||
Sbjct: 1769 aatgcttataaaaatcaaggaaca 1746
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>emb|CR595622.1| full-length cDNA clone CS0DD006YH02 of Neuroblastoma Cot
            50-normalized of Homo sapiens (human)
          Length = 1606

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 337  aatgcttataaatatcaaggaaca 360
            |||||||||||| |||||||||||
Sbjct: 1511 aatgcttataaaaatcaaggaaca 1488
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>dbj|AK024046.1| Homo sapiens cDNA FLJ13984 fis, clone Y79AA1001846
          Length = 2247

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 337  aatgcttataaatatcaaggaaca 360
            |||||||||||| |||||||||||
Sbjct: 1599 aatgcttataaaaatcaaggaaca 1576
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>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005
          Length = 4429080

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 158     ttcttccccaacgacgagaa 177
               ||||||||||||||||||||
Sbjct: 3342941 ttcttccccaacgacgagaa 3342922
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>gb|M38217.1|HUMKCHN Homo sapiens voltage-gated potassium channel (HGK5) gene, complete
           cds
          Length = 2397

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 56  cccgccgcgacttccagcgc 75
           ||||||||||||||||||||
Sbjct: 497 cccgccgcgacttccagcgc 516
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>ref|XM_685585.1| PREDICTED: Danio rerio similar to MGC83846 protein (LOC562187), mRNA
          Length = 4376

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 425  actttaaaggaaactcagct 444
            ||||||||||||||||||||
Sbjct: 3330 actttaaaggaaactcagct 3349
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>ref|NM_002232.3| Homo sapiens potassium voltage-gated channel, shaker-related
           subfamily, member 3 (KCNA3), mRNA
          Length = 3346

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 56  cccgccgcgacttccagcgc 75
           ||||||||||||||||||||
Sbjct: 859 cccgccgcgacttccagcgc 878
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>emb|BX649437.8| Zebrafish DNA sequence from clone DKEY-28J9 in linkage group 16,
             complete sequence
          Length = 158346

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 425   actttaaaggaaactcagct 444
             ||||||||||||||||||||
Sbjct: 91718 actttaaaggaaactcagct 91699
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 285      tcctccaagaactggagcca 304
                ||||||||||||||||||||
Sbjct: 14093773 tcctccaagaactggagcca 14093754
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>gb|AC007739.2| Homo sapiens BAC clone RP11-91L3 from 2, complete sequence
          Length = 159123

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 337   aatgcttataaatatcaaggaaca 360
             |||||||||||| |||||||||||
Sbjct: 25062 aatgcttataaaaatcaaggaaca 25039
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>gb|AY890524.1| Synthetic construct Homo sapiens clone FLH141226.01X potassium
           voltage-gated channel shaker-related subfamily member 3
           (KCNA3) mRNA, complete cds
          Length = 1572

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 56  cccgccgcgacttccagcgc 75
           ||||||||||||||||||||
Sbjct: 479 cccgccgcgacttccagcgc 498
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>gb|L23499.1|HUMPOCH Homo sapiens voltage-gated potassium channel (KCNA3) mRNA, complete
           cds
          Length = 1836

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 56  cccgccgcgacttccagcgc 75
           ||||||||||||||||||||
Sbjct: 649 cccgccgcgacttccagcgc 668
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 285      tcctccaagaactggagcca 304
                ||||||||||||||||||||
Sbjct: 14048053 tcctccaagaactggagcca 14048034
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>gb|U38240.1|OCU38240 Oryctolagus cuniculus glibenclamide-sensitive voltage-gated
           potassium channel (Kv1.3-glib) gene, complete cds
          Length = 1551

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 56  cccgccgcgacttccagcgc 75
           ||||||||||||||||||||
Sbjct: 458 cccgccgcgacttccagcgc 477
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>emb|AL732644.3|CNS08C9J Oryza sativa chromosome 12, . BAC OSJNBa0016A01 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 150703

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 285   tcctccaagaactggagcca 304
             ||||||||||||||||||||
Sbjct: 20314 tcctccaagaactggagcca 20295
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>gb|AE017198.1| Lactobacillus johnsonii NCC 533, complete genome
          Length = 1992676

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 197    aagaagtacgttgaaatgatgaac 220
              ||||||||| ||||||||||||||
Sbjct: 473538 aagaagtactttgaaatgatgaac 473561
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>gb|L26971.1|TRBFCABP Trypanosoma cruzi calcium-binding protein mRNA, complete cds
          Length = 843

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 240 ctatattggttgtgcaacag 259
           ||||||||||||||||||||
Sbjct: 15  ctatattggttgtgcaacag 34
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>gb|M85217.1|HUMKCHAN H.sapiens K+ channel protein (HLK3) mRNA, complete cds
          Length = 3004

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 56  cccgccgcgacttccagcgc 75
           ||||||||||||||||||||
Sbjct: 562 cccgccgcgacttccagcgc 581
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>gb|M55515.1|HUMPCD Human potassium channel protein (HPCN3) gene, complete cds
          Length = 1820

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 56  cccgccgcgacttccagcgc 75
           ||||||||||||||||||||
Sbjct: 604 cccgccgcgacttccagcgc 623


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,188,387
Number of Sequences: 3902068
Number of extensions: 4188387
Number of successful extensions: 152207
Number of sequences better than 10.0: 83
Number of HSP's better than 10.0 without gapping: 83
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 151924
Number of HSP's gapped (non-prelim): 277
length of query: 575
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 552
effective length of database: 17,143,297,704
effective search space: 9463100332608
effective search space used: 9463100332608
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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