ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags12e07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_474251.1| Oryza sativa (japonica cultivar-group), predic... 281 1e-72
2emb|AL606646.3|OSJN00091 Oryza sativa genomic DNA, chromosome 4,... 281 1e-72
3dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 281 1e-72
4dbj|AK121951.1| Oryza sativa (japonica cultivar-group) cDNA clon... 274 3e-70
5gb|AY112248.1| Zea mays CL633_5 mRNA sequence 117 4e-23
6gb|AY103670.1| Zea mays PCO086234 mRNA sequence 109 9e-21
7dbj|AP006377.1| Lotus japonicus genomic DNA, chromosome 1, clone... 82 2e-12
8gb|AC166091.3| Glycine max clone gmw1-11j16, complete sequence 66 1e-07
9dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 66 1e-07
10dbj|AP003609.2| Oryza sativa (japonica cultivar-group) genomic D... 66 1e-07
11dbj|AK103787.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 1e-07
12ref|XM_464444.1| Oryza sativa (japonica cultivar-group), mRNA 58 3e-05
13dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 58 3e-05
14dbj|AP000366.2| Oryza sativa (japonica cultivar-group) genomic D... 58 3e-05
15emb|AJ297304.1|PPI297304 Pinus pinaster partial mRNA for protein... 56 1e-04
16gb|BC100162.1| Xenopus laevis cDNA clone MGC:114600 IMAGE:417447... 48 0.027
17gb|AY104443.1| Zea mays PCO095642 mRNA sequence 46 0.11
18ref|XM_523457.1| PREDICTED: Pan troglodytes similar to Zinc fing... 40 6.6
19gb|AC165141.4| Mus musculus BAC clone RP24-535G5 from chromosome... 40 6.6
20gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 compl... 40 6.6
21ref|XM_653425.1| Aspergillus nidulans FGSC A4 hypothetical prote... 40 6.6
22gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete... 40 6.6
23gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, comp... 40 6.6
24emb|CT025463.2| Xenopus tropicalis finished cDNA, clone TGas119k03 40 6.6
25gb|CP000316.1| Polaromonas sp. JS666, complete genome 40 6.6
26emb|AL020995.14|HS117O3 Human DNA sequence from clone RP1-117O3 ... 40 6.6
27ref|XM_783612.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 6.6
28gb|AC164662.6| Mus musculus 10 BAC RP24-279D11 (Roswell Park Can... 40 6.6
29gb|AC011342.5| Homo sapiens chromosome 5 clone CTC-276H5, comple... 40 6.6
30gb|AC008641.7| Homo sapiens chromosome 5 clone CTB-17P3, complet... 40 6.6
31dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome 40 6.6
32emb|X91077.1|VFRNAMETA V.faba mRNA for metallothionein protein (... 40 6.6
33ref|XM_313187.2| Anopheles gambiae str. PEST ENSANGP00000013277 ... 40 6.6
34gb|AC153496.4| Mus musculus 10 BAC RP23-373D1 (Roswell Park Canc... 40 6.6
35emb|AL672242.12| Mouse DNA sequence from clone RP23-83P17 on chr... 40 6.6

>ref|XM_474251.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 930

 Score =  281 bits (142), Expect = 1e-72
 Identities = 315/373 (84%), Gaps = 6/373 (1%)
 Strand = Plus / Plus

                                                                       
Query: 113 acacgcatgtgcaccaagtacaacactgcagaaggctgcaagtttggtgacaagtgccat 172
           |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 316 acacgcatgtgcaccaagtataacactgcagaaggctgcaaatttggtgacaagtgccat 375

                                                                       
Query: 173 ttcgcccatggtgagagggagcttggcaggccaccatcctcctacatgtcccaggaaagt 232
           |||||||||||||||||||| ||||||| |||| | |      |||||||||| || |||
Sbjct: 376 ttcgcccatggtgagagggaacttggcaagccagctt------acatgtcccatgagagt 429

                                                                       
Query: 233 tcctacgcacctcctacgggtggtcgatatggaggtcgacacgaaccacctcctccagct 292
            ||   || ||||||| |||||||||||||||||| ||||  ||||||||||| ||||| 
Sbjct: 430 gccatggctcctcctatgggtggtcgatatggaggccgacctgaaccacctccaccagcc 489

                                                                       
Query: 293 tcgatgggccctccagccggaaactttggcgcctcgtctacctgcaaggtcagtgtcgat 352
            | ||||| |||||||| ||||||||||| || ||  ||||   |||| |||| || |||
Sbjct: 490 gctatgggtcctccagcaggaaactttggtgcatctgctactgccaagatcagcgttgat 549

                                                                       
Query: 353 gccgctctcgccggaggcataatcgggaagggtggggtcaacacgaagcagatctgccgt 412
           ||| | || || || |||||||| ||||||||||| ||||||||||||||||| ||||| 
Sbjct: 550 gcctcgcttgctggtggcataattgggaagggtggagtcaacacgaagcagatatgccga 609

                                                                       
Query: 413 gtcacgggggtcaagctctcgatacgcgaccacgaatcaaacccagacttgaagaacatt 472
           || || |||||||||||||| ||||| ||||| |||||| |  || || |||||||||||
Sbjct: 610 gtaactggggtcaagctctcaatacgtgaccatgaatcagattcaaacctgaagaacatt 669

                        
Query: 473 gagctcgaaggca 485
           |||||||||||||
Sbjct: 670 gagctcgaaggca 682



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 84/100 (84%)
 Strand = Plus / Plus

                                                                       
Query: 1   gcactttgtccctggtgggtaccaggcagtatcaaaatcacacaacctaggccatgctgc 60
           ||||||||||||||||||||| || |||||| ||||| ||| ||| |||||| |  | ||
Sbjct: 183 gcactttgtccctggtgggtatcaagcagtagcaaaaacactcaatctaggcaacccagc 242

                                                   
Query: 61  tgtgtctgcaccgtcaagaactcctgcagatcatgctgct 100
           |||| |||||||| ||||| |||||   ||||||||||||
Sbjct: 243 tgtgcctgcaccggcaagagctcctatggatcatgctgct 282



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>emb|AL606646.3|OSJN00091 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0087O24,
             complete sequence
          Length = 146168

 Score =  281 bits (142), Expect = 1e-72
 Identities = 315/373 (84%), Gaps = 6/373 (1%)
 Strand = Plus / Plus

                                                                         
Query: 113   acacgcatgtgcaccaagtacaacactgcagaaggctgcaagtttggtgacaagtgccat 172
             |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 70010 acacgcatgtgcaccaagtataacactgcagaaggctgcaaatttggtgacaagtgccat 70069

                                                                         
Query: 173   ttcgcccatggtgagagggagcttggcaggccaccatcctcctacatgtcccaggaaagt 232
             |||||||||||||||||||| ||||||| |||| | |      |||||||||| || |||
Sbjct: 70070 ttcgcccatggtgagagggaacttggcaagccagctt------acatgtcccatgagagt 70123

                                                                         
Query: 233   tcctacgcacctcctacgggtggtcgatatggaggtcgacacgaaccacctcctccagct 292
              ||   || ||||||| |||||||||||||||||| ||||  ||||||||||| ||||| 
Sbjct: 70124 gccatggctcctcctatgggtggtcgatatggaggccgacctgaaccacctccaccagcc 70183

                                                                         
Query: 293   tcgatgggccctccagccggaaactttggcgcctcgtctacctgcaaggtcagtgtcgat 352
              | ||||| |||||||| ||||||||||| || ||  ||||   |||| |||| || |||
Sbjct: 70184 gctatgggtcctccagcaggaaactttggtgcatctgctactgccaagatcagcgttgat 70243

                                                                         
Query: 353   gccgctctcgccggaggcataatcgggaagggtggggtcaacacgaagcagatctgccgt 412
             ||| | || || || |||||||| ||||||||||| ||||||||||||||||| ||||| 
Sbjct: 70244 gcctcgcttgctggtggcataattgggaagggtggagtcaacacgaagcagatatgccga 70303

                                                                         
Query: 413   gtcacgggggtcaagctctcgatacgcgaccacgaatcaaacccagacttgaagaacatt 472
             || || |||||||||||||| ||||| ||||| |||||| |  || || |||||||||||
Sbjct: 70304 gtaactggggtcaagctctcaatacgtgaccatgaatcagattcaaacctgaagaacatt 70363

                          
Query: 473   gagctcgaaggca 485
             |||||||||||||
Sbjct: 70364 gagctcgaaggca 70376



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 84/100 (84%)
 Strand = Plus / Plus

                                                                         
Query: 1     gcactttgtccctggtgggtaccaggcagtatcaaaatcacacaacctaggccatgctgc 60
             ||||||||||||||||||||| || |||||| ||||| ||| ||| |||||| |  | ||
Sbjct: 69877 gcactttgtccctggtgggtatcaagcagtagcaaaaacactcaatctaggcaacccagc 69936

                                                     
Query: 61    tgtgtctgcaccgtcaagaactcctgcagatcatgctgct 100
             |||| |||||||| ||||| |||||   ||||||||||||
Sbjct: 69937 tgtgcctgcaccggcaagagctcctatggatcatgctgct 69976



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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  281 bits (142), Expect = 1e-72
 Identities = 315/373 (84%), Gaps = 6/373 (1%)
 Strand = Plus / Plus

                                                                            
Query: 113      acacgcatgtgcaccaagtacaacactgcagaaggctgcaagtttggtgacaagtgccat 172
                |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 34019114 acacgcatgtgcaccaagtataacactgcagaaggctgcaaatttggtgacaagtgccat 34019173

                                                                            
Query: 173      ttcgcccatggtgagagggagcttggcaggccaccatcctcctacatgtcccaggaaagt 232
                |||||||||||||||||||| ||||||| |||| | |      |||||||||| || |||
Sbjct: 34019174 ttcgcccatggtgagagggaacttggcaagccagctt------acatgtcccatgagagt 34019227

                                                                            
Query: 233      tcctacgcacctcctacgggtggtcgatatggaggtcgacacgaaccacctcctccagct 292
                 ||   || ||||||| |||||||||||||||||| ||||  ||||||||||| ||||| 
Sbjct: 34019228 gccatggctcctcctatgggtggtcgatatggaggccgacctgaaccacctccaccagcc 34019287

                                                                            
Query: 293      tcgatgggccctccagccggaaactttggcgcctcgtctacctgcaaggtcagtgtcgat 352
                 | ||||| |||||||| ||||||||||| || ||  ||||   |||| |||| || |||
Sbjct: 34019288 gctatgggtcctccagcaggaaactttggtgcatctgctactgccaagatcagcgttgat 34019347

                                                                            
Query: 353      gccgctctcgccggaggcataatcgggaagggtggggtcaacacgaagcagatctgccgt 412
                ||| | || || || |||||||| ||||||||||| ||||||||||||||||| ||||| 
Sbjct: 34019348 gcctcgcttgctggtggcataattgggaagggtggagtcaacacgaagcagatatgccga 34019407

                                                                            
Query: 413      gtcacgggggtcaagctctcgatacgcgaccacgaatcaaacccagacttgaagaacatt 472
                || || |||||||||||||| ||||| ||||| |||||| |  || || |||||||||||
Sbjct: 34019408 gtaactggggtcaagctctcaatacgtgaccatgaatcagattcaaacctgaagaacatt 34019467

                             
Query: 473      gagctcgaaggca 485
                |||||||||||||
Sbjct: 34019468 gagctcgaaggca 34019480



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 84/100 (84%)
 Strand = Plus / Plus

                                                                            
Query: 1        gcactttgtccctggtgggtaccaggcagtatcaaaatcacacaacctaggccatgctgc 60
                ||||||||||||||||||||| || |||||| ||||| ||| ||| |||||| |  | ||
Sbjct: 34018981 gcactttgtccctggtgggtatcaagcagtagcaaaaacactcaatctaggcaacccagc 34019040

                                                        
Query: 61       tgtgtctgcaccgtcaagaactcctgcagatcatgctgct 100
                |||| |||||||| ||||| |||||   ||||||||||||
Sbjct: 34019041 tgtgcctgcaccggcaagagctcctatggatcatgctgct 34019080



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>dbj|AK121951.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107K04, full
           insert sequence
          Length = 1349

 Score =  274 bits (138), Expect = 3e-70
 Identities = 314/373 (84%), Gaps = 6/373 (1%)
 Strand = Plus / Plus

                                                                       
Query: 113 acacgcatgtgcaccaagtacaacactgcagaaggctgcaagtttggtgacaagtgccat 172
           |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 438 acacgcatgtgcaccaagtataacactgcagaaggctgcaaatttggtgacaagtgccat 497

                                                                       
Query: 173 ttcgcccatggtgagagggagcttggcaggccaccatcctcctacatgtcccaggaaagt 232
           |||||||||||||||||||| ||||||| |||| | |      |||||||||| || |||
Sbjct: 498 ttcgcccatggtgagagggaacttggcaagccagctt------acatgtcccatgagagt 551

                                                                       
Query: 233 tcctacgcacctcctacgggtggtcgatatggaggtcgacacgaaccacctcctccagct 292
            ||   || ||||||| |||||||||||||||||| ||||  ||||||||||| ||||| 
Sbjct: 552 gccatggctcctcctatgggtggtcgatatggaggccgacctgaaccacctccaccagcc 611

                                                                       
Query: 293 tcgatgggccctccagccggaaactttggcgcctcgtctacctgcaaggtcagtgtcgat 352
            | ||||| |||||||| ||||||||||| || ||  ||||   |||| |||| || |||
Sbjct: 612 gctatgggtcctccagcaggaaactttggtgcatctgctactgccaagatcagcgttgat 671

                                                                       
Query: 353 gccgctctcgccggaggcataatcgggaagggtggggtcaacacgaagcagatctgccgt 412
           ||| | || || || |||||||| ||||||||||| ||||||||||||||||| ||||| 
Sbjct: 672 gcctcgcttgctggtggcataattgggaagggtggagtcaacacgaagcagatatgccga 731

                                                                       
Query: 413 gtcacgggggtcaagctctcgatacgcgaccacgaatcaaacccagacttgaagaacatt 472
           || || |||||||||||||| ||||| ||||| |||||  |  || || |||||||||||
Sbjct: 732 gtaactggggtcaagctctcaatacgtgaccatgaatcggattcaaacctgaagaacatt 791

                        
Query: 473 gagctcgaaggca 485
           |||||||||||||
Sbjct: 792 gagctcgaaggca 804



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 84/100 (84%)
 Strand = Plus / Plus

                                                                       
Query: 1   gcactttgtccctggtgggtaccaggcagtatcaaaatcacacaacctaggccatgctgc 60
           ||||||||||||||||||||| || |||||| ||||| ||| ||| |||||| |  | ||
Sbjct: 305 gcactttgtccctggtgggtatcaagcagtagcaaaaacactcaatctaggcaacccagc 364

                                                   
Query: 61  tgtgtctgcaccgtcaagaactcctgcagatcatgctgct 100
           |||| |||||||| ||||| |||||   ||||||||||||
Sbjct: 365 tgtgcctgcaccggcaagagctcctatggatcatgctgct 404



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>gb|AY112248.1| Zea mays CL633_5 mRNA sequence
          Length = 1172

 Score =  117 bits (59), Expect = 4e-23
 Identities = 164/199 (82%)
 Strand = Plus / Plus

                                                                       
Query: 287 ccagcttcgatgggccctccagccggaaactttggcgcctcgtctacctgcaaggtcagt 346
           |||||| | |||||||||||||| ||||||||||| |||||| | ||   |||| |||||
Sbjct: 525 ccagctgccatgggccctccagcaggaaactttggtgcctcggcgactgccaagatcagt 584

                                                                       
Query: 347 gtcgatgccgctctcgccggaggcataatcgggaagggtggggtcaacacgaagcagatc 406
           || |||||  |||| ||||| |||||||| || ||||| ||||||||||| |||||||| 
Sbjct: 585 gtggatgcgtctcttgccggtggcataattggtaagggcggggtcaacactaagcagata 644

                                                                       
Query: 407 tgccgtgtcacgggggtcaagctctcgatacgcgaccacgaatcaaacccagacttgaag 466
            || | ||||| | |||||||||||  || ||||||||||| || | |||  || |||||
Sbjct: 645 agcagagtcaccgaggtcaagctctgtatccgcgaccacgagtctagccccaacctgaag 704

                              
Query: 467 aacattgagctcgaaggca 485
           ||||||||||| |||||||
Sbjct: 705 aacattgagctggaaggca 723



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 54/59 (91%)
 Strand = Plus / Plus

                                                                      
Query: 113 acacgcatgtgcaccaagtacaacactgcagaaggctgcaagtttggtgacaagtgcca 171
           ||||||||||||||||||||||| ||| ||||||||||||  |||||||| ||||||||
Sbjct: 366 acacgcatgtgcaccaagtacaatactacagaaggctgcagatttggtgataagtgcca 424



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>gb|AY103670.1| Zea mays PCO086234 mRNA sequence
          Length = 1256

 Score =  109 bits (55), Expect = 9e-21
 Identities = 163/199 (81%)
 Strand = Plus / Plus

                                                                       
Query: 287 ccagcttcgatgggccctccagccggaaactttggcgcctcgtctacctgcaaggtcagt 346
           |||||| | |||||||||||||| ||||||||||| |||||| | ||   |||| |||||
Sbjct: 554 ccagctgccatgggccctccagcaggaaactttggtgcctcggcgactgccaagatcagt 613

                                                                       
Query: 347 gtcgatgccgctctcgccggaggcataatcgggaagggtggggtcaacacgaagcagatc 406
           || || ||| |||| ||||| ||||||||||| ||||||||||||||||| |||||||| 
Sbjct: 614 gtggacgcctctctggccggtggcataatcggcaagggtggggtcaacactaagcagata 673

                                                                       
Query: 407 tgccgtgtcacgggggtcaagctctcgatacgcgaccacgaatcaaacccagacttgaag 466
            |  |  | || || ||||||||||| || ||||||||||| || |||||  || | |||
Sbjct: 674 agtagaattacaggcgtcaagctctccatccgcgaccacgagtctaaccccaacctaaag 733

                              
Query: 467 aacattgagctcgaaggca 485
           ||||| ||||| |||||||
Sbjct: 734 aacatcgagctggaaggca 752



 Score =  109 bits (55), Expect = 9e-21
 Identities = 67/71 (94%)
 Strand = Plus / Plus

                                                                       
Query: 107 gtcaaaacacgcatgtgcaccaagtacaacactgcagaaggctgcaagtttggtgacaag 166
           ||||| ||||||||||||||||||||||||||| |||||||||||||||| ||||| |||
Sbjct: 392 gtcaagacacgcatgtgcaccaagtacaacactacagaaggctgcaagttcggtgataag 451

                      
Query: 167 tgccatttcgc 177
           |||||||||||
Sbjct: 452 tgccatttcgc 462



 Score = 44.1 bits (22), Expect = 0.42
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 1   gcactttgtccctggtgggtaccaggcagt 30
           |||||||||||||||||| |||| ||||||
Sbjct: 262 gcactttgtccctggtggttacccggcagt 291



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 241 acctcctacgggtggtcgatatgga 265
           |||||||| ||||||||||||||||
Sbjct: 511 acctcctatgggtggtcgatatgga 535



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 155 tttggtgacaagtgccatttcgcccatggtgagagggagc 194
           |||||||||  |||||| ||||||||||| |||| |||||
Sbjct: 944 tttggtgaccggtgccacttcgcccatggcgagacggagc 983



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>dbj|AP006377.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT38A19, TM0221,
             complete sequence
          Length = 110900

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 68/77 (88%)
 Strand = Plus / Plus

                                                                         
Query: 110   aaaacacgcatgtgcaccaagtacaacactgcagaaggctgcaagtttggtgacaagtgc 169
             ||||| ||||| |||| |||||  |||||||| ||||||||||| ||||||||||| |||
Sbjct: 77925 aaaactcgcatatgcaacaagtttaacactgctgaaggctgcaaatttggtgacaaatgc 77984

                              
Query: 170   catttcgcccatggtga 186
             ||||| |||||||||||
Sbjct: 77985 cattttgcccatggtga 78001



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>gb|AC166091.3| Glycine max clone gmw1-11j16, complete sequence
          Length = 69947

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 72/85 (84%)
 Strand = Plus / Plus

                                                                        
Query: 116  cgcatgtgcaccaagtacaacactgcagaaggctgcaagtttggtgacaagtgccatttc 175
            ||||| |||| |||||  || ||||| ||||| ||||| ||||||||||| |||||||| 
Sbjct: 1336 cgcatatgcaacaagtttaatactgctgaaggttgcaaatttggtgacaaatgccatttt 1395

                                     
Query: 176  gcccatggtgagagggagcttggca 200
            || ||||||||  ||||||||||||
Sbjct: 1396 gctcatggtgaatgggagcttggca 1420



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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 75/89 (84%)
 Strand = Plus / Minus

                                                                            
Query: 110      aaaacacgcatgtgcaccaagtacaacactgcagaaggctgcaagtttggtgacaagtgc 169
                ||||| |||||||| | ||||||||||||||||||||| || || |  |||  |||||| 
Sbjct: 24426076 aaaactcgcatgtgtaacaagtacaacactgcagaaggatgtaaatggggtagcaagtgt 24426017

                                             
Query: 170      catttcgcccatggtgagagggagcttgg 198
                ||||| || ||||| ||||||||||||||
Sbjct: 24426016 cattttgctcatggagagagggagcttgg 24425988



 Score = 48.1 bits (24), Expect = 0.027
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                                
Query: 148      ctgcaagtttggtgacaagtgccatttcgcccatggtgagagggagct 195
                ||||| |||||| |||| ||| ||||||||||||||||| || |||||
Sbjct: 24425558 ctgcacgtttggagacaggtgtcatttcgcccatggtgaaagtgagct 24425511



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>dbj|AP003609.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0012B02
          Length = 149807

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 75/89 (84%)
 Strand = Plus / Minus

                                                                         
Query: 110   aaaacacgcatgtgcaccaagtacaacactgcagaaggctgcaagtttggtgacaagtgc 169
             ||||| |||||||| | ||||||||||||||||||||| || || |  |||  |||||| 
Sbjct: 37549 aaaactcgcatgtgtaacaagtacaacactgcagaaggatgtaaatggggtagcaagtgt 37490

                                          
Query: 170   catttcgcccatggtgagagggagcttgg 198
             ||||| || ||||| ||||||||||||||
Sbjct: 37489 cattttgctcatggagagagggagcttgg 37461



 Score = 48.1 bits (24), Expect = 0.027
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                             
Query: 148   ctgcaagtttggtgacaagtgccatttcgcccatggtgagagggagct 195
             ||||| |||||| |||| ||| ||||||||||||||||| || |||||
Sbjct: 37031 ctgcacgtttggagacaggtgtcatttcgcccatggtgaaagtgagct 36984



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>dbj|AK103787.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033145I17, full
            insert sequence
          Length = 3135

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 75/89 (84%)
 Strand = Plus / Plus

                                                                        
Query: 110  aaaacacgcatgtgcaccaagtacaacactgcagaaggctgcaagtttggtgacaagtgc 169
            ||||| |||||||| | ||||||||||||||||||||| || || |  |||  |||||| 
Sbjct: 2234 aaaactcgcatgtgtaacaagtacaacactgcagaaggatgtaaatggggtagcaagtgt 2293

                                         
Query: 170  catttcgcccatggtgagagggagcttgg 198
            ||||| || ||||| ||||||||||||||
Sbjct: 2294 cattttgctcatggagagagggagcttgg 2322



 Score = 48.1 bits (24), Expect = 0.027
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                            
Query: 148  ctgcaagtttggtgacaagtgccatttcgcccatggtgagagggagct 195
            ||||| |||||| |||| ||| ||||||||||||||||| || |||||
Sbjct: 2752 ctgcacgtttggagacaggtgtcatttcgcccatggtgaaagtgagct 2799



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>ref|XM_464444.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 903

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 113/141 (80%)
 Strand = Plus / Plus

                                                                       
Query: 337 caaggtcagtgtcgatgccgctctcgccggaggcataatcgggaagggtggggtcaacac 396
           |||| ||||||| |||||  |||| || || ||||||||||||| ||||||||| |||||
Sbjct: 519 caagatcagtgttgatgcatctcttgcaggtggcataatcgggaggggtggggttaacac 578

                                                                       
Query: 397 gaagcagatctgccgtgtcacgggggtcaagctctcgatacgcgaccacgaatcaaaccc 456
            |||||||| | | | ||||| |||| ||||||  | || || || || |||||| || |
Sbjct: 579 aaagcagatatccagagtcacaggggccaagctggccatccgtgatcatgaatcagacac 638

                                
Query: 457 agacttgaagaacattgagct 477
             ||||||| |||||||||||
Sbjct: 639 caacttgaaaaacattgagct 659



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 67/81 (82%)
 Strand = Plus / Plus

                                                                       
Query: 120 tgtgcaccaagtacaacactgcagaaggctgcaagtttggtgacaagtgccatttcgccc 179
           |||||| |||||| ||||||||||| || ||||| |  || || |||||||| || || |
Sbjct: 311 tgtgcaacaagtataacactgcagagggatgcaaatggggggataagtgccactttgcgc 370

                                
Query: 180 atggtgagagggagcttggca 200
           | |||||||||||||| ||||
Sbjct: 371 acggtgagagggagctcggca 391



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 155 tttggtgacaagtgccatttcgcccatggtga 186
           ||||| |||| ||||||||| |||||||||||
Sbjct: 841 tttggcgacaggtgccattttgcccatggtga 872



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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 113/141 (80%)
 Strand = Plus / Plus

                                                                           
Query: 337     caaggtcagtgtcgatgccgctctcgccggaggcataatcgggaagggtggggtcaacac 396
               |||| ||||||| |||||  |||| || || ||||||||||||| ||||||||| |||||
Sbjct: 5253170 caagatcagtgttgatgcatctcttgcaggtggcataatcgggaggggtggggttaacac 5253229

                                                                           
Query: 397     gaagcagatctgccgtgtcacgggggtcaagctctcgatacgcgaccacgaatcaaaccc 456
                |||||||| | | | ||||| |||| ||||||  | || || || || |||||| || |
Sbjct: 5253230 aaagcagatatccagagtcacaggggccaagctggccatccgtgatcatgaatcagacac 5253289

                                    
Query: 457     agacttgaagaacattgagct 477
                 ||||||| |||||||||||
Sbjct: 5253290 caacttgaaaaacattgagct 5253310



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 67/81 (82%)
 Strand = Plus / Plus

                                                                           
Query: 120     tgtgcaccaagtacaacactgcagaaggctgcaagtttggtgacaagtgccatttcgccc 179
               |||||| |||||| ||||||||||| || ||||| |  || || |||||||| || || |
Sbjct: 5252962 tgtgcaacaagtataacactgcagagggatgcaaatggggggataagtgccactttgcgc 5253021

                                    
Query: 180     atggtgagagggagcttggca 200
               | |||||||||||||| ||||
Sbjct: 5253022 acggtgagagggagctcggca 5253042



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                               
Query: 155     tttggtgacaagtgccatttcgcccatggtga 186
               ||||| |||| ||||||||| |||||||||||
Sbjct: 5253492 tttggcgacaggtgccattttgcccatggtga 5253523



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>dbj|AP000366.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0437H03
          Length = 170173

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 113/141 (80%)
 Strand = Plus / Plus

                                                                          
Query: 337    caaggtcagtgtcgatgccgctctcgccggaggcataatcgggaagggtggggtcaacac 396
              |||| ||||||| |||||  |||| || || ||||||||||||| ||||||||| |||||
Sbjct: 146623 caagatcagtgttgatgcatctcttgcaggtggcataatcgggaggggtggggttaacac 146682

                                                                          
Query: 397    gaagcagatctgccgtgtcacgggggtcaagctctcgatacgcgaccacgaatcaaaccc 456
               |||||||| | | | ||||| |||| ||||||  | || || || || |||||| || |
Sbjct: 146683 aaagcagatatccagagtcacaggggccaagctggccatccgtgatcatgaatcagacac 146742

                                   
Query: 457    agacttgaagaacattgagct 477
                ||||||| |||||||||||
Sbjct: 146743 caacttgaaaaacattgagct 146763



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 67/81 (82%)
 Strand = Plus / Plus

                                                                          
Query: 120    tgtgcaccaagtacaacactgcagaaggctgcaagtttggtgacaagtgccatttcgccc 179
              |||||| |||||| ||||||||||| || ||||| |  || || |||||||| || || |
Sbjct: 146415 tgtgcaacaagtataacactgcagagggatgcaaatggggggataagtgccactttgcgc 146474

                                   
Query: 180    atggtgagagggagcttggca 200
              | |||||||||||||| ||||
Sbjct: 146475 acggtgagagggagctcggca 146495



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 155    tttggtgacaagtgccatttcgcccatggtga 186
              ||||| |||| ||||||||| |||||||||||
Sbjct: 146945 tttggcgacaggtgccattttgcccatggtga 146976



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>emb|AJ297304.1|PPI297304 Pinus pinaster partial mRNA for protein with similarity to the EST
           C99174
          Length = 243

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                       
Query: 155 tttggtgacaagtgccatttcgcccatggtgagagggagcttgg 198
           ||||| |||||||||||||| ||||||||||| | |||||||||
Sbjct: 60  tttggggacaagtgccattttgcccatggtgaaaaggagcttgg 103



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>gb|BC100162.1| Xenopus laevis cDNA clone MGC:114600 IMAGE:4174475, complete cds
          Length = 2595

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                               
Query: 148 ctgcaagtttggtgacaagtgccatttcgcccatgg 183
           |||||||| ||||||||||||||| || ||||||||
Sbjct: 616 ctgcaagtatggtgacaagtgccagtttgcccatgg 651



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>gb|AY104443.1| Zea mays PCO095642 mRNA sequence
          Length = 1246

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 68/83 (81%)
 Strand = Plus / Plus

                                                                       
Query: 116 cgcatgtgcaccaagtacaacactgcagaaggctgcaagtttggtgacaagtgccatttc 175
           |||||||| | ||||||||||||||| ||||| || || |  ||   ||||||||| || 
Sbjct: 440 cgcatgtgtaacaagtacaacactgccgaaggatgtaaatgggggagcaagtgccacttt 499

                                  
Query: 176 gcccatggtgagagggagcttgg 198
           || ||||| ||||||||||||||
Sbjct: 500 gctcatggagagagggagcttgg 522



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>ref|XM_523457.1| PREDICTED: Pan troglodytes similar to Zinc finger protein 469
            (LOC468066), mRNA
          Length = 9939

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 337  caaggtcagtgtcgatgccgctct 360
            ||||||||||| ||||||||||||
Sbjct: 4185 caaggtcagtggcgatgccgctct 4162



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>gb|AC165141.4| Mus musculus BAC clone RP24-535G5 from chromosome 17, complete sequence
          Length = 187883

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 154   gtttggtgacaagtgccatt 173
             ||||||||||||||||||||
Sbjct: 58898 gtttggtgacaagtgccatt 58917



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>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome
          Length = 6397126

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 78      gaactcctgcagatcatgct 97
               ||||||||||||||||||||
Sbjct: 3791380 gaactcctgcagatcatgct 3791399



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>ref|XM_653425.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN0913.2), mRNA
          Length = 921

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 277 accacctcctccagcttcga 296
           ||||||||||||||||||||
Sbjct: 684 accacctcctccagcttcga 703



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>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome
          Length = 6093698

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 78      gaactcctgcagatcatgct 97
               ||||||||||||||||||||
Sbjct: 3812853 gaactcctgcagatcatgct 3812872



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>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome
          Length = 5928787

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 78      gaactcctgcagatcatgct 97
               ||||||||||||||||||||
Sbjct: 3595583 gaactcctgcagatcatgct 3595602



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>emb|CT025463.2| Xenopus tropicalis finished cDNA, clone TGas119k03
          Length = 2491

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 148 ctgcaagtttggtgacaagtgccatttcgcccatgg 183
           ||||||||  |||||||||||||| || ||||||||
Sbjct: 671 ctgcaagtacggtgacaagtgccagtttgcccatgg 706



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>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 167     tgccatttcgcccatggtga 186
               ||||||||||||||||||||
Sbjct: 2813448 tgccatttcgcccatggtga 2813429



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>emb|AL020995.14|HS117O3 Human DNA sequence from clone RP1-117O3 on chromosome 1p33-34.3
             Contains the 3' end of a novel gene, the AK2 gene for
             adenylate kinase 2, the gene for ornithine
             decarboxylase-like (ODC-p) and a CpG island, complete
             sequence
          Length = 150997

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 135   acactgcagaaggctgcaag 154
             ||||||||||||||||||||
Sbjct: 73324 acactgcagaaggctgcaag 73343



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>ref|XM_783612.1| PREDICTED: Strongylocentrotus purpuratus similar to PPAR-alpha
            interacting complex protein 285 (LOC583716), mRNA
          Length = 10350

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 274  cgaaccacctcctccagctt 293
            ||||||||||||||||||||
Sbjct: 1640 cgaaccacctcctccagctt 1621



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>gb|AC164662.6| Mus musculus 10 BAC RP24-279D11 (Roswell Park Cancer Institute
             (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 154482

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 154   gtttggtgacaagtgccatt 173
             ||||||||||||||||||||
Sbjct: 80031 gtttggtgacaagtgccatt 80012



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>gb|AC011342.5| Homo sapiens chromosome 5 clone CTC-276H5, complete sequence
          Length = 120584

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 189    gggagcttggcaggccacca 208
              ||||||||||||||||||||
Sbjct: 111309 gggagcttggcaggccacca 111328



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>gb|AC008641.7| Homo sapiens chromosome 5 clone CTB-17P3, complete sequence
          Length = 176629

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 189    gggagcttggcaggccacca 208
              ||||||||||||||||||||
Sbjct: 161334 gggagcttggcaggccacca 161315



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>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome
          Length = 3573470

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 85      tgcagatcatgctgcttctggtgt 108
               ||||||||| ||||||||||||||
Sbjct: 1867439 tgcagatcaagctgcttctggtgt 1867462



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>emb|X91077.1|VFRNAMETA V.faba mRNA for metallothionein protein (683bp)
          Length = 683

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 142 agaaggctgcaagtttggtgacaagtgc 169
           |||||||||||||| |||||| ||||||
Sbjct: 238 agaaggctgcaagtgtggtgataagtgc 265



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>ref|XM_313187.2| Anopheles gambiae str. PEST ENSANGP00000013277 (ENSANGG00000010788),
            partial mRNA
          Length = 3012

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 147  gctgcaagtttggtgacaagtgcc 170
            ||||||||||||| ||||||||||
Sbjct: 2660 gctgcaagtttggcgacaagtgcc 2683



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>gb|AC153496.4| Mus musculus 10 BAC RP23-373D1 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 149839

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 154   gtttggtgacaagtgccatt 173
             ||||||||||||||||||||
Sbjct: 51098 gtttggtgacaagtgccatt 51117



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>emb|AL672242.12| Mouse DNA sequence from clone RP23-83P17 on chromosome 17, complete
              sequence
          Length = 222709

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 154    gtttggtgacaagtgccatt 173
              ||||||||||||||||||||
Sbjct: 204798 gtttggtgacaagtgccatt 204779


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,368,650
Number of Sequences: 3902068
Number of extensions: 3368650
Number of successful extensions: 66173
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 65935
Number of HSP's gapped (non-prelim): 228
length of query: 486
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 464
effective length of database: 17,147,199,772
effective search space: 7956300694208
effective search space used: 7956300694208
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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