>TLR9_CANFA (Q5I2M8) Toll-like receptor 9 precursor (CD289 antigen)|
          Length = 1032

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +1

Query: 496 LYSLCNDREANLWSLFWCFHACLGW 570
           L+ LC       W L++CFH CL W
Sbjct: 837 LHQLCG------WDLWYCFHLCLAW 855

>TLR9_FELCA (Q5I2M7) Toll-like receptor 9 precursor (CD289 antigen)|
          Length = 1031

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +1

Query: 496 LYSLCNDREANLWSLFWCFHACLGW 570
           L+ LC       W L++CFH CL W
Sbjct: 835 LHHLCG------WDLWYCFHLCLAW 853

>POLG_HRV1B (P12916) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat|
            protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein
            VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein
            P2A); Core protein P2B; Core protein P2C; Core protein
            P3A; Genome
          Length = 2156

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 13/39 (33%), Positives = 23/39 (58%)
 Frame = +1

Query: 280  NTGQKKVTVDVKATSDISIKQTLVPLSKGESKRVSIIYN 396
            N  Q+K+  ++    D+S K   +PL   E+KR+ ++YN
Sbjct: 1160 NATQEKIKCEIDTLHDLSCK--FLPLYAHEAKRIKVLYN 1196

>TLR9_PIG (Q5I2M3) Toll-like receptor 9 precursor (CD289 antigen)|
          Length = 1030

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +1

Query: 496 LYSLCNDREANLWSLFWCFHACLGW 570
           L+ LC       W L++CFH CL W
Sbjct: 834 LHHLCG------WDLWYCFHLCLAW 852

>TLR9_HUMAN (Q9NR96) Toll-like receptor 9 precursor (CD289 antigen)|
          Length = 1032

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +1

Query: 496 LYSLCNDREANLWSLFWCFHACLGW 570
           L+ LC       W L++CFH CL W
Sbjct: 835 LHHLCG------WDLWYCFHLCLAW 853

>RTCA_METJA (Q60335) Probable RNA 3'-terminal phosphate cyclase (EC 6.5.1.4)|
           (RNA-3'-phosphate cyclase) (RNA cyclase)
          Length = 338

 Score = 29.3 bits (64), Expect = 8.4
 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = +1

Query: 268 FIVQNTGQKKVTVDVKATSDISIK-QTLVPLSKGESKRVSIIYNG 399
           FI      K  T+D+     IS+  QTL+PLS G +K+ ++   G
Sbjct: 77  FIPSKLSPKDFTIDIGTAGSISLVIQTLLPLSLGINKKFTVKIKG 121


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 74,553,813
Number of Sequences: 219361
Number of extensions: 1373018
Number of successful extensions: 3099
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3021
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3098
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4872342800
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)