ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags12d02 |
|---|---|
| Clone Library Name | barley_pub |
>TIP1_MOUSE (Q9CR47) TGF-beta-inducible nuclear protein 1 (L-name-related| protein 42) (LNR42) Length = 260 Score = 139 bits (349), Expect = 4e-33 Identities = 66/100 (66%), Positives = 79/100 (79%) Frame = +2 Query: 140 KAQXKKTLKMHDESSSRQKVDDDVEEGALPPYLLDRDSTQRAKVLSNTIKQKRKEKAGKW 319 K Q KKT+KMH++ +++QK D+ +GA+P YLLDR+ RAKVLSN IKQKRKEKAGKW Sbjct: 58 KIQMKKTIKMHEKRNTKQKDDEKTPQGAVPAYLLDREGQSRAKVLSNMIKQKRKEKAGKW 117 Query: 320 DVPLPKVRPVAEEEMFKVLRTGKRKTKQWKRMVTKATFVG 439 +VPLPKVR E E+ KV+RTGKRK K WKRMVTK FVG Sbjct: 118 EVPLPKVRAQGETEVLKVIRTGKRKKKAWKRMVTKVCFVG 157
>TIP1_HUMAN (O95478) TGF-beta-inducible nuclear protein 1 (Hairy cell leukemia| protein 1) Length = 260 Score = 139 bits (349), Expect = 4e-33 Identities = 66/100 (66%), Positives = 79/100 (79%) Frame = +2 Query: 140 KAQXKKTLKMHDESSSRQKVDDDVEEGALPPYLLDRDSTQRAKVLSNTIKQKRKEKAGKW 319 K Q KKT+KMH++ +++QK D+ +GA+P YLLDR+ RAKVLSN IKQKRKEKAGKW Sbjct: 58 KIQMKKTIKMHEKRNTKQKNDEKTPQGAVPAYLLDREGQSRAKVLSNMIKQKRKEKAGKW 117 Query: 320 DVPLPKVRPVAEEEMFKVLRTGKRKTKQWKRMVTKATFVG 439 +VPLPKVR E E+ KV+RTGKRK K WKRMVTK FVG Sbjct: 118 EVPLPKVRAQGETEVLKVIRTGKRKKKAWKRMVTKVCFVG 157
>TIP1_BOVIN (Q3SX11) TGF-beta-inducible nuclear protein 1| Length = 260 Score = 139 bits (349), Expect = 4e-33 Identities = 66/100 (66%), Positives = 79/100 (79%) Frame = +2 Query: 140 KAQXKKTLKMHDESSSRQKVDDDVEEGALPPYLLDRDSTQRAKVLSNTIKQKRKEKAGKW 319 K Q KKT+KMH++ +++QK D+ +GA+P YLLDR+ RAKVLSN IKQKRKEKAGKW Sbjct: 58 KIQMKKTIKMHEKRNTKQKNDEKTPQGAVPAYLLDREGQSRAKVLSNMIKQKRKEKAGKW 117 Query: 320 DVPLPKVRPVAEEEMFKVLRTGKRKTKQWKRMVTKATFVG 439 +VPLPKVR E E+ KV+RTGKRK K WKRMVTK FVG Sbjct: 118 EVPLPKVRAQGETEVLKVIRTGKRKKKAWKRMVTKVCFVG 157
>TIP1_RAT (Q9QYU7) TGF-beta-inducible nuclear protein 1 (Protein CDK105)| Length = 260 Score = 135 bits (341), Expect = 3e-32 Identities = 64/100 (64%), Positives = 78/100 (78%) Frame = +2 Query: 140 KAQXKKTLKMHDESSSRQKVDDDVEEGALPPYLLDRDSTQRAKVLSNTIKQKRKEKAGKW 319 K Q KKT+KMH++ +++QK D+ +GA+P YLLDR+ RAKVLSN IKQKRKEKAGKW Sbjct: 58 KIQMKKTIKMHEKRNTKQKDDEKTPQGAVPAYLLDREGQSRAKVLSNMIKQKRKEKAGKW 117 Query: 320 DVPLPKVRPVAEEEMFKVLRTGKRKTKQWKRMVTKATFVG 439 + PLPKVR E E+ KV+RTGKRK K W+RMVTK FVG Sbjct: 118 ESPLPKVRAQGETELLKVIRTGKRKKKAWRRMVTKVCFVG 157
>YEV6_YEAST (P40078) Hypothetical 29.7 kDa protein in RSP5-LCP5 intergenic| region Length = 261 Score = 110 bits (276), Expect(2) = 5e-30 Identities = 54/101 (53%), Positives = 72/101 (71%), Gaps = 1/101 (0%) Frame = +2 Query: 140 KAQXKKTLKMHDESSSRQKVDD-DVEEGALPPYLLDRDSTQRAKVLSNTIKQKRKEKAGK 316 K +K +K H++S + D + ALP YLLDR+ AK +S++IKQKR EKA K Sbjct: 58 KVSMRKKIKAHEQSKVKGSSKPLDTDGDALPTYLLDREQNNTAKAISSSIKQKRLEKADK 117 Query: 317 WDVPLPKVRPVAEEEMFKVLRTGKRKTKQWKRMVTKATFVG 439 + VPLPKVR ++EEEMFKV++TGK ++K WKRM+TK TFVG Sbjct: 118 FSVPLPKVRGISEEEMFKVIKTGKSRSKSWKRMITKHTFVG 158 Score = 38.9 bits (89), Expect(2) = 5e-30 Identities = 21/44 (47%), Positives = 28/44 (63%) Frame = +1 Query: 1 RHGRRMXLRGSASAXKEARSVKKNSKDARKLLGAKGKRFAKKRY 132 +HG+R+ +EAR K S+ A+KL G KGK+FAKKRY Sbjct: 13 QHGKRLD-HEERKRKREARESHKISERAQKLTGWKGKQFAKKRY 55
>UNC89_CAEEL (O01761) Muscle M-line assembly protein unc-89 (Uncoordinated protein| 89) Length = 8081 Score = 32.7 bits (73), Expect = 0.41 Identities = 27/90 (30%), Positives = 38/90 (42%) Frame = +2 Query: 134 PXKAQXKKTLKMHDESSSRQKVDDDVEEGALPPYLLDRDSTQRAKVLSNTIKQKRKEKAG 313 P K + K T ESS +K DD+V+ P T K S T K+K EK+ Sbjct: 1659 PEKVEEKPTSPTKKESSPTKKTDDEVKS---PTKKEKSPQTVEEKPASPTKKEKSPEKSV 1715 Query: 314 KWDVPLPKVRPVAEEEMFKVLRTGKRKTKQ 403 +V PK + + E T K K+ + Sbjct: 1716 VEEVKSPKEKSPEKAEEKPKSPTKKEKSPE 1745
>SAHH_NOCFA (Q5YQS7) Adenosylhomocysteinase (EC 3.3.1.1)| (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase) Length = 494 Score = 32.7 bits (73), Expect = 0.41 Identities = 19/54 (35%), Positives = 26/54 (48%) Frame = +2 Query: 218 GALPPYLLDRDSTQRAKVLSNTIKQKRKEKAGKWDVPLPKVRPVAEEEMFKVLR 379 G +PP D D + KV N ++++ + GKW VR V EE VLR Sbjct: 173 GVVPPE--DADHSAEYKVFLNLLRERFETDRGKWTAIAESVRGVTEETTTGVLR 224
>FUR1C_DROME (P30430) Furin-like protease 1, isoform 1-CRR precursor (EC| 3.4.21.75) (Furin-1) (Kex2-like endoprotease 1) (dKLIP-1) Length = 1101 Score = 30.8 bits (68), Expect = 1.6 Identities = 16/44 (36%), Positives = 25/44 (56%) Frame = +2 Query: 182 SSRQKVDDDVEEGALPPYLLDRDSTQRAKVLSNTIKQKRKEKAG 313 SS KVD + + LPPY+LD ++ +AK+ N K + +G Sbjct: 178 SSALKVDPNGQSPVLPPYVLDYETGGKAKLTPNNGKFGQSGSSG 221
>FUR11_DROME (P26016) Furin-like protease 1, isoforms 1/1-X/2 precursor (EC| 3.4.21.75) (Furin-1) (Kex2-like endoprotease 1) (dKLIP-1) Length = 1269 Score = 30.8 bits (68), Expect = 1.6 Identities = 16/44 (36%), Positives = 25/44 (56%) Frame = +2 Query: 182 SSRQKVDDDVEEGALPPYLLDRDSTQRAKVLSNTIKQKRKEKAG 313 SS KVD + + LPPY+LD ++ +AK+ N K + +G Sbjct: 178 SSALKVDPNGQSPVLPPYVLDYETGGKAKLTPNNGKFGQSGSSG 221
>S35B4_MOUSE (Q8CIA5) UDP-xylose and UDP-N-acetylglucosamine transporter (Solute| carrier family 35 member B4) Length = 331 Score = 30.4 bits (67), Expect = 2.0 Identities = 15/45 (33%), Positives = 27/45 (60%) Frame = -3 Query: 424 FSYHSLPLLGFPLAST*NFEHFFFSNRSDLWQRNVPFASLFLPLL 290 F H+LPL GF ++ ++H N+S+L+Q VP + +P++ Sbjct: 197 FYNHALPLPGFIFLASDIYDHVVLFNKSELYQ--VPVIGVTMPVM 239
>PURL_THET8 (Q5SMH8) Phosphoribosylformylglycinamidine synthase II (EC 6.3.5.3)| (FGAM synthase II) Length = 725 Score = 30.4 bits (67), Expect = 2.0 Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 1/60 (1%) Frame = +2 Query: 212 EEGALPPYLLDRDSTQRAKVLSNTIKQKRKEKA-GKWDVPLPKVRPVAEEEMFKVLRTGK 388 EEG P LL +S +R ++ K+K E+ G+W + V E +F+VL G+ Sbjct: 291 EEGMTPEELLLSESQERMVLVPKEGKEKALEEVFGRWGLDCVPVARTIPERVFRVLFRGE 350
>PURL_THET2 (Q72IH7) Phosphoribosylformylglycinamidine synthase II (EC 6.3.5.3)| (FGAM synthase II) Length = 725 Score = 30.4 bits (67), Expect = 2.0 Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 1/60 (1%) Frame = +2 Query: 212 EEGALPPYLLDRDSTQRAKVLSNTIKQKRKEKA-GKWDVPLPKVRPVAEEEMFKVLRTGK 388 EEG P LL +S +R ++ K+K E+ G+W + V E +F+VL G+ Sbjct: 291 EEGMTPEELLLSESQERMVLVPKEGKEKALEEVFGRWGLDCVPVARTIPERVFRVLFRGE 350
>S35B4_PONPY (Q5R8M3) UDP-xylose and UDP-N-acetylglucosamine transporter (Solute| carrier family 35 member B4) Length = 331 Score = 30.0 bits (66), Expect = 2.7 Identities = 14/45 (31%), Positives = 27/45 (60%) Frame = -3 Query: 424 FSYHSLPLLGFPLAST*NFEHFFFSNRSDLWQRNVPFASLFLPLL 290 F H+LPL GF ++ ++H N+S+L++ +P + LP++ Sbjct: 197 FYNHALPLPGFVFLASDIYDHAVLFNKSELYE--IPVIGVTLPIM 239
>S35B4_HUMAN (Q969S0) UDP-xylose and UDP-N-acetylglucosamine transporter (Solute| carrier family 35 member B4) (YEA4 homolog) Length = 331 Score = 30.0 bits (66), Expect = 2.7 Identities = 14/45 (31%), Positives = 27/45 (60%) Frame = -3 Query: 424 FSYHSLPLLGFPLAST*NFEHFFFSNRSDLWQRNVPFASLFLPLL 290 F H+LPL GF ++ ++H N+S+L++ +P + LP++ Sbjct: 197 FYNHALPLPGFVFLASDIYDHAVLFNKSELYE--IPVIGVTLPIM 239
>DPS1_SCHPO (O43091) Decaprenyl-diphosphate synthase subunit 1 (EC 2.5.1.-)| (Decaprenyl pyrophosphate synthetase subunit 1) Length = 378 Score = 29.6 bits (65), Expect = 3.5 Identities = 15/50 (30%), Positives = 28/50 (56%) Frame = +3 Query: 246 VIRHSVPRFSATRLSKRGRKRLANGTFLCQRSDLLLKKKCSKFYVLARGK 395 V+R S +A+ L K ++++ G S+ ++CSK+Y +A+GK Sbjct: 23 VLRFSTTNRNASHLIKNELEQISPGIRQMLNSNSEFLEECSKYYTIAQGK 72
>NADE2_THEMA (Q9X0Y0) Probable glutamine-dependent NAD(+) synthetase (EC| 6.3.5.1) (NAD(+) synthase [glutamine-hydrolyzing]) Length = 576 Score = 29.3 bits (64), Expect = 4.5 Identities = 15/31 (48%), Positives = 21/31 (67%) Frame = +2 Query: 299 KEKAGKWDVPLPKVRPVAEEEMFKVLRTGKR 391 +EK+G ++ P+ PV EEEMF+ L TG R Sbjct: 278 REKSGHFE-PVVNPLPVREEEMFRALITGLR 307
>S35B4_MACFA (Q95KB4) UDP-xylose and UDP-N-acetylglucosamine transporter (Solute| carrier family 35 member B4) Length = 331 Score = 28.9 bits (63), Expect = 5.9 Identities = 14/45 (31%), Positives = 27/45 (60%) Frame = -3 Query: 424 FSYHSLPLLGFPLAST*NFEHFFFSNRSDLWQRNVPFASLFLPLL 290 F H+LPL GF ++ ++H N+S+L++ +P + LP++ Sbjct: 197 FYNHALPLPGFIFLASDIYDHAVLFNKSELYE--IPGIGVTLPIM 239
>COASY_PIG (Q8MIR4) Bifunctional coenzyme A synthase (CoA synthase) (NBP)| (POV-2) [Includes: Phosphopantetheine adenylyltransferase (EC 2.7.7.3) (Pantetheine-phosphate adenylyltransferase) (PPAT) (Dephospho-CoA pyrophosphorylase); Dephospho-CoA kinase (EC Length = 562 Score = 28.9 bits (63), Expect = 5.9 Identities = 15/52 (28%), Positives = 27/52 (51%) Frame = +2 Query: 236 LLDRDSTQRAKVLSNTIKQKRKEKAGKWDVPLPKVRPVAEEEMFKVLRTGKR 391 +L +D T KVL + + +K+ D+ P + +A EE+ + + GKR Sbjct: 413 ILHKDGTINRKVLGSRVFGNKKQLKILTDIVWPVIAKLAREEVDQAVAEGKR 464
>TR150_XENLA (Q5BJ39) Thyroid hormone receptor-associated protein 3 (Thyroid| hormone receptor-associated protein complex 150 kDa component) (Trap150) Length = 951 Score = 28.9 bits (63), Expect = 5.9 Identities = 23/88 (26%), Positives = 35/88 (39%) Frame = +2 Query: 152 KKTLKMHDESSSRQKVDDDVEEGALPPYLLDRDSTQRAKVLSNTIKQKRKEKAGKWDVPL 331 KK H E D D +G P D + +KV++ K + +EK+GKW+ Sbjct: 417 KKMADFHKEELDEH--DKDKSKGRKEPEF-DDEPKFMSKVIAGASKNQEEEKSGKWE--- 470 Query: 332 PKVRPVAEEEMFKVLRTGKRKTKQWKRM 415 L TGK K ++ + M Sbjct: 471 -------------SLHTGKEKQRKAEEM 485
>TR150_MOUSE (Q569Z6) Thyroid hormone receptor-associated protein 3 (Thyroid| hormone receptor-associated protein complex 150 kDa component) (Trap150) Length = 951 Score = 28.9 bits (63), Expect = 5.9 Identities = 23/88 (26%), Positives = 35/88 (39%) Frame = +2 Query: 152 KKTLKMHDESSSRQKVDDDVEEGALPPYLLDRDSTQRAKVLSNTIKQKRKEKAGKWDVPL 331 KK H E D D +G P D + +KV++ K + +EK+GKW+ Sbjct: 417 KKMADFHKEELDEH--DKDKSKGRKEPEF-DDEPKFMSKVIAGASKNQEEEKSGKWE--- 470 Query: 332 PKVRPVAEEEMFKVLRTGKRKTKQWKRM 415 L TGK K ++ + M Sbjct: 471 -------------SLHTGKEKQRKAEEM 485
>MESD2_HUMAN (Q14696) Mesoderm development candidate 2 (NY-REN-61 antigen)| Length = 234 Score = 28.9 bits (63), Expect = 5.9 Identities = 14/53 (26%), Positives = 28/53 (52%), Gaps = 5/53 (9%) Frame = +2 Query: 92 CSVLRARGSPRSGMPXKAQXKKTLKMHDESSSRQKV-----DDDVEEGALPPY 235 C+ + G+P P + KK ++ ++++ + + DDD+EEG LP + Sbjct: 32 CAAEGSPGTPDESTPPPRKKKKDIRDYNDADMARLLEQWEKDDDIEEGDLPEH 84
>SL9A1_MOUSE (Q61165) Sodium/hydrogen exchanger 1 (Na(+)/H(+) exchanger 1)| (NHE-1) (Solute carrier family 9 member 1) Length = 820 Score = 28.9 bits (63), Expect = 5.9 Identities = 19/55 (34%), Positives = 27/55 (49%) Frame = +2 Query: 272 LSNTIKQKRKEKAGKWDVPLPKVRPVAEEEMFKVLRTGKRKTKQWKRMVTKATFV 436 +S Q KA D LP + EEE+ K+LR+ +KT+Q R + T V Sbjct: 605 VSTVSMQNIHPKAVTSDRILPALSKDKEEEIRKILRSNLQKTRQRLRSYNRHTLV 659
>ASPM_COLGU (P62287) Abnormal spindle-like microcephaly-associated protein| homolog Length = 3477 Score = 28.5 bits (62), Expect = 7.7 Identities = 13/39 (33%), Positives = 24/39 (61%) Frame = +3 Query: 195 RLMMTLRRALFLRICLIVIRHSVPRFSATRLSKRGRKRL 311 R+ LR+ +++R C+IVI+ F A +L KR ++ + Sbjct: 1476 RMHKELRKYIYIRSCVIVIQKRFRCFQAQKLYKRKKESI 1514
>TR150_RAT (Q5M7V8) Thyroid hormone receptor-associated protein 3 (Thyroid| hormone receptor-associated protein complex 150 kDa component) (Trap150) Length = 951 Score = 28.5 bits (62), Expect = 7.7 Identities = 18/57 (31%), Positives = 27/57 (47%) Frame = +2 Query: 152 KKTLKMHDESSSRQKVDDDVEEGALPPYLLDRDSTQRAKVLSNTIKQKRKEKAGKWD 322 KK H E Q D D +G P D + +KV++ K + +EK+GKW+ Sbjct: 417 KKMADFHKEEMDEQ--DKDKCKGRKEPEF-DDEPKFISKVIAGASKNQEEEKSGKWE 470
>SEC10_YEAST (Q06245) Exocyst complex component SEC10| Length = 871 Score = 28.5 bits (62), Expect = 7.7 Identities = 18/58 (31%), Positives = 29/58 (50%) Frame = -3 Query: 373 NFEHFFFSNRSDLWQRNVPFASLFLPLLLNRVAENLGTLCRITIKQIRRKSALLNVII 200 NF F + L ++ S+FLPLL N E + +T QI++ L+N+I+ Sbjct: 641 NFLKFISMSTEILDLLSISIKSIFLPLL-NNSPEIKAQIIEMTNSQIQKMEILINIIL 697
>CAF1A_MOUSE (Q9QWF0) Chromatin assembly factor 1 subunit A (CAF-1 subunit A)| (Chromatin assembly factor I p150 subunit) (CAF-I 150 kDa subunit) (CAF-Ip150) Length = 911 Score = 28.5 bits (62), Expect = 7.7 Identities = 26/95 (27%), Positives = 45/95 (47%) Frame = +2 Query: 140 KAQXKKTLKMHDESSSRQKVDDDVEEGALPPYLLDRDSTQRAKVLSNTIKQKRKEKAGKW 319 K + +K LK E R+K + D +E A L + +R + L +++KRK++ K Sbjct: 346 KKEEEKELK---EKERREKREKDEKEKAEKQRLKEEKRKERQEALEAKLEEKRKKEEEK- 401 Query: 320 DVPLPKVRPVAEEEMFKVLRTGKRKTKQWKRMVTK 424 + EEE K LR +++ K K +T+ Sbjct: 402 --------RLREEE--KRLREEEKRIKAEKAEITR 426
>ASPM_MACMU (P62292) Abnormal spindle-like microcephaly-associated protein| homolog Length = 3479 Score = 28.5 bits (62), Expect = 7.7 Identities = 13/39 (33%), Positives = 24/39 (61%) Frame = +3 Query: 195 RLMMTLRRALFLRICLIVIRHSVPRFSATRLSKRGRKRL 311 R+ LR+ +++R C+IVI+ F A +L KR ++ + Sbjct: 1476 RMHKELRKYIYIRSCVIVIQKRFRCFQAQKLYKRKKESI 1514
>SAHH_MYCLE (Q9CCJ4) Adenosylhomocysteinase (EC 3.3.1.1)| (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase) Length = 492 Score = 28.5 bits (62), Expect = 7.7 Identities = 17/54 (31%), Positives = 26/54 (48%) Frame = +2 Query: 218 GALPPYLLDRDSTQRAKVLSNTIKQKRKEKAGKWDVPLPKVRPVAEEEMFKVLR 379 G +PP + D + KV N ++++ + GKW V+ V EE VLR Sbjct: 171 GVVPP--AEVDDSAEWKVFLNLLRKRFETDKGKWTKIAKSVKGVTEETTTGVLR 222
>ASPM_MACFA (P62291) Abnormal spindle-like microcephaly-associated protein| homolog Length = 3476 Score = 28.5 bits (62), Expect = 7.7 Identities = 13/39 (33%), Positives = 24/39 (61%) Frame = +3 Query: 195 RLMMTLRRALFLRICLIVIRHSVPRFSATRLSKRGRKRL 311 R+ LR+ +++R C+IVI+ F A +L KR ++ + Sbjct: 1476 RMHKELRKYIYIRSCVIVIQKRFRCFQAQKLYKRKKESI 1514
>ASPM_MOUSE (Q8CJ27) Abnormal spindle-like microcephaly-associated protein| homolog (Calmodulin-binding protein 1) (Spindle and hydroxyurea checkpoint abnormal protein) (Calmodulin-binding protein Sha1) Length = 3122 Score = 28.5 bits (62), Expect = 7.7 Identities = 13/34 (38%), Positives = 22/34 (64%) Frame = +3 Query: 195 RLMMTLRRALFLRICLIVIRHSVPRFSATRLSKR 296 R+ L++ +++R C+IVI+ V F A +L KR Sbjct: 1443 RMHRELQKYIYIRSCVIVIQRRVRCFQAQKLYKR 1476 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 56,040,993 Number of Sequences: 219361 Number of extensions: 1060910 Number of successful extensions: 3605 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 3481 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3604 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2618960580 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
