>UBCD4_DROME (P52486) Ubiquitin-conjugating enzyme E2-22 kDa (EC 6.3.2.19)|
           (Ubiquitin-protein ligase) (Ubiquitin carrier protein)
          Length = 199

 Score = 37.0 bits (84), Expect = 0.042
 Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
 Frame = -1

Query: 450 FVSTARYWTEAFAKSDST--GMEEKVQKLVEMGFPEDMVRSALKSVNGDENMALEKLCS 280
           F+ TA++WT A+A    T    + K+Q+L +MG  E   R+ L   N +   A E L S
Sbjct: 141 FLLTAKHWTNAYAGGPHTFPDCDSKIQRLRDMGIDEHEARAVLSKENWNLEKATEGLFS 199

>DDI1_YEAST (P40087) DNA damage-inducible protein DDI1 (v-SNARE-master 1)|
          Length = 428

 Score = 35.0 bits (79), Expect = 0.16
 Identities = 18/52 (34%), Positives = 27/52 (51%)
 Frame = -1

Query: 441 TARYWTEAFAKSDSTGMEEKVQKLVEMGFPEDMVRSALKSVNGDENMALEKL 286
           T R    A   +  T  E+ +++L+++GFP D V  ALK  NG+   A   L
Sbjct: 375 TGRSTAGATTATGRTFPEQTIKQLMDLGFPRDAVVKALKQTNGNAEFAASLL 426

>UBC1_YEAST (P21734) Ubiquitin-conjugating enzyme E2-24 kDa (EC 6.3.2.19)|
           (Ubiquitin-protein ligase) (Ubiquitin carrier protein)
          Length = 215

 Score = 34.7 bits (78), Expect = 0.21
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = -1

Query: 471 YLRDKATFVSTARYWTEAFAKSDSTGMEEKVQKLVEMGFPEDMV 340
           YLRD+ +F  TA  WT  +A   S G +  V++    G   D++
Sbjct: 130 YLRDRESFNKTAALWTRLYASETSNGQKGNVEESDLYGIDHDLI 173

>Y3846_ARATH (Q8LB17) Protein At3g58460|
          Length = 403

 Score = 33.1 bits (74), Expect = 0.60
 Identities = 17/37 (45%), Positives = 23/37 (62%)
 Frame = -1

Query: 390 EEKVQKLVEMGFPEDMVRSALKSVNGDENMALEKLCS 280
           EE++QKLV MGF    V  AL + + D  +A+E L S
Sbjct: 364 EEQIQKLVAMGFDRTQVEVALAAADDDLTVAVEILMS 400

>EF3_CANGA (O93796) Elongation factor 3 (EF-3)|
          Length = 1045

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = -1

Query: 417 FAKSDSTGMEEKVQ-KLVEMGFPEDMVRSALKSVNGDENMAL 295
           F  S   G +E +  KLVE GF E+M+   + S++G   M L
Sbjct: 511 FVVSSEVGTKEAITAKLVEFGFTEEMINMPISSLSGGWKMKL 552

>BMP2K_HUMAN (Q9NSY1) BMP-2-inducible protein kinase (EC 2.7.11.1) (BIKe)|
          Length = 1161

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = +3

Query: 405 HSLQTPRSNSEQY*QMWPCHADTVVQQQHPEDHQGQEQKEELEGIAMP 548
           HS+  P+ ++ QY  M P +     QQQ    HQ  +Q+   E +  P
Sbjct: 521 HSVYQPQPSASQYPTMMPQYQQAFFQQQMLAQHQPSQQQASPEYLTSP 568

>UBP14_SCHPO (Q11119) Ubiquitin carboxyl-terminal hydrolase 14 (EC 3.1.2.15)|
           (Ubiquitin thioesterase 14)
           (Ubiquitin-specific-processing protease 14)
           (Deubiquitinating enzyme 14) (UBA-domain-containing
           protein 2)
          Length = 775

 Score = 30.4 bits (67), Expect = 3.9
 Identities = 20/69 (28%), Positives = 32/69 (46%)
 Frame = -1

Query: 426 TEAFAKSDSTGMEEKVQKLVEMGFPEDMVRSALKSVNGDENMALEKLCSG*RPCMAYKKC 247
           +E   K+DS+  EE VQ L E GF     R  L   N +   A++ + +   P  ++++ 
Sbjct: 630 SELLPKADSSVSEENVQSLCEFGFTVAQARKGLLESNNNIERAVDWILN--HPDESFEEP 687

Query: 246 KLRGHSYGI 220
            L G    I
Sbjct: 688 PLEGSDSSI 696

>LAMA_DROME (Q00174) Laminin alpha chain precursor|
          Length = 3712

 Score = 30.4 bits (67), Expect = 3.9
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = -1

Query: 108 YHN*ADCLPCLCHSHGS 58
           Y++  DCLPC C SHGS
Sbjct: 623 YYSYPDCLPCHCDSHGS 639

>5HT2A_DROME (P28285) 5-hydroxytryptamine receptor 2A (5-HT receptor) (Serotonin|
           receptor 2A)
          Length = 834

 Score = 30.4 bits (67), Expect = 3.9
 Identities = 17/55 (30%), Positives = 25/55 (45%)
 Frame = +3

Query: 393 CQWSHSLQTPRSNSEQY*QMWPCHADTVVQQQHPEDHQGQEQKEELEGIAMPSSR 557
           C  SH L    + S    +       T  QQ H + HQ Q+Q+++L  IA P  +
Sbjct: 679 CNQSHPLCGTANESPSTPEPRSRQPTTPQQQPHQQAHQQQQQQQQLSSIANPMQK 733

>RRPL_SEOU8 (P27314) RNA-directed RNA polymerase (EC 2.7.7.48) (L protein)|
          Length = 2151

 Score = 30.0 bits (66), Expect = 5.1
 Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 6/58 (10%)
 Frame = -1

Query: 393  MEEKVQKLVEMGFPEDMVRSALKSVNGDENMALEKLCSG*R------PCMAYKKCKLR 238
            MEE  ++LV  G     +R   + VNG +++ L K  SG        PC+ YK C LR
Sbjct: 1767 MEEVSKELVRCG-----MRFNTEQVNGVKHLVLFKTDSGFEWGKPNIPCIVYKNCALR 1819

>URED_RHIME (P42888) Urease accessory protein ureD|
          Length = 277

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 22/79 (27%), Positives = 34/79 (43%)
 Frame = +1

Query: 235 ATQFTLLIGHTRPSARAELLESHVLVAVHALQGASHHILGEAXXXXXXXXXXXASGVTLC 414
           A  F  L+ +  P   ++L +  + +A HAL G SH+ +G             A G  L 
Sbjct: 199 AAAFATLV-YAAPDCESQLSKLRLALAGHALSGVSHYDVG--GRDKIVARVAAADGFALR 255

Query: 415 KRLGPIASSTNKCGLVTQI 471
           K L P+ S   K   V ++
Sbjct: 256 KILIPLISHLRKDASVPKV 274


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 74,328,691
Number of Sequences: 219361
Number of extensions: 1343473
Number of successful extensions: 4086
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3773
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4056
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5044307840
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)