ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal9g24
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_463675.1| Oryza sativa (japonica cultivar-group), predic... 317 2e-83
2dbj|AK073357.1| Oryza sativa (japonica cultivar-group) cDNA clon... 317 2e-83
3gb|BT017297.1| Zea mays clone EL01N0315H07.c mRNA sequence 307 2e-80
4gb|AY110058.1| Zea mays CL9888_1 mRNA sequence 170 3e-39
5dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 139 1e-29
6dbj|AP004332.3| Oryza sativa (japonica cultivar-group) genomic D... 139 1e-29
7dbj|AP003262.3| Oryza sativa (japonica cultivar-group) genomic D... 139 1e-29
8gb|AC146747.7| Medicago truncatula clone mth2-14h5, complete seq... 90 1e-14
9gb|AF458962.1|AF458962 Zea mays CDC5 protein (CDC5) mRNA, comple... 74 6e-10
10gb|DQ241834.1| Solanum tuberosum clone 180C02 ubiquitin conjugat... 72 2e-09
11gb|DQ284494.1| Solanum tuberosum clone 063D04 ubiquitin-conjugat... 72 2e-09
12emb|X82938.1|LEUBC1 L.esculentum mRNA for ubiquitin conjugating ... 64 5e-07
13dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
14dbj|AP003920.3| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
15dbj|AP004015.3| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
16dbj|AK064897.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
17ref|XM_508970.1| PREDICTED: Pan troglodytes similar to Ubiquitin... 44 0.51
18ref|XM_543845.2| PREDICTED: Canis familiaris similar to Ubiquiti... 44 0.51
19ref|XM_862321.1| PREDICTED: Canis familiaris similar to Ubiquiti... 44 0.51
20ref|XM_862310.1| PREDICTED: Canis familiaris similar to Ubiquiti... 44 0.51
21ref|XM_862300.1| PREDICTED: Canis familiaris similar to Ubiquiti... 44 0.51
22emb|CR861453.1| Pongo pygmaeus mRNA; cDNA DKFZp459D032 (from clo... 44 0.51
23ref|XM_588574.2| PREDICTED: Bos taurus similar to protocadherin ... 42 2.0
24gb|AC128663.4| Mus musculus BAC clone RP24-263E2 from chromosome... 42 2.0
25gb|AC083869.2|AC083869 Homo sapiens chromosome 7 clone RP11-733N... 42 2.0
26gb|AC009541.16|AC009541 Human Chromosome 7 clone RP11-233L24, co... 42 2.0
27ref|XM_875102.1| PREDICTED: Bos taurus similar to zinc finger pr... 40 8.0
28ref|XM_875017.1| PREDICTED: Bos taurus similar to zinc finger pr... 40 8.0
29ref|XM_874941.1| PREDICTED: Bos taurus similar to zinc finger pr... 40 8.0
30ref|XM_874861.1| PREDICTED: Bos taurus similar to zinc finger pr... 40 8.0
31ref|XM_874774.1| PREDICTED: Bos taurus similar to zinc finger pr... 40 8.0
32ref|XM_874692.1| PREDICTED: Bos taurus similar to zinc finger pr... 40 8.0
33ref|XM_874604.1| PREDICTED: Bos taurus similar to zinc finger pr... 40 8.0
34ref|XM_586296.2| PREDICTED: Bos taurus similar to zinc finger pr... 40 8.0
35gb|AY345879.1| Homo sapiens chromosome 19 YAC/BAC clone TAR1-1, ... 40 8.0
36gb|AY150217.1| Ambystoma tigrinum stebbensi virus, complete genome 40 8.0
37gb|AC104094.4| Homo sapiens BAC clone RP11-1383E23 from 7, compl... 40 8.0
38emb|AL035697.19|HS45F6 Human DNA sequence from clone RP1-45F6 on... 40 8.0
39gb|AC125257.4| Homo sapiens chromosome , clone RP11-229E13, comp... 40 8.0
40emb|BX572101.1| Prochlorococcus marinus MIT9313 complete genome;... 40 8.0
41emb|AL645783.13| Mouse DNA sequence from clone RP23-459H16 on ch... 40 8.0
42emb|AJ010592.2|GTAJ10592 Guillardia theta DNA for complete seque... 40 8.0
43gb|AC009374.7| Drosophila melanogaster 3L BAC RP98-4J11 (Roswell... 40 8.0
44ref|XM_941263.1| PREDICTED: Homo sapiens similar to SHC transfor... 40 8.0
45gb|AF083031.2|AF083031 Guillardia theta nucleomorph chromosome 3... 40 8.0
46gb|AF165818.4|AF165818 Guillardia theta nucleomorph chromosome 1... 40 8.0
47gb|AC138433.2| Homo sapiens chromosome 19 clone XXfos-85899E4, c... 40 8.0
48ref|XM_213539.3| PREDICTED: Rattus norvegicus similar to p150 ta... 40 8.0
49gb|AC091172.11| Homo sapiens chromosome 17, clone RP11-156E6, co... 40 8.0
50gb|AF075703.1|AF075703 HIV-1 isolate FIN9363 subtype F1 from Fin... 40 8.0
51emb|AL136293.5|CNS01DVX Human chromosome 14 DNA sequence BAC C-2... 40 8.0
52gb|AE003524.5| Drosophila melanogaster chromosome 3L, section 61... 40 8.0
53gb|AE000657.1| Aquifex aeolicus VF5, complete genome 40 8.0 
>ref|XM_463675.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 588

 Score =  317 bits (160), Expect = 2e-83
 Identities = 265/300 (88%)
 Strand = Plus / Minus

                                                                       
Query: 274 tcagccagagcagagcttctcgagagccatgttctcgtcgccgttcacgctcttcagggc 333
           ||||||||||||||||||||| |||||||||||||||||||| || || ||||||||  |
Sbjct: 588 tcagccagagcagagcttctcaagagccatgttctcgtcgccattgacactcttcagaac 529

                                                                       
Query: 334 gcttctcaccatatcctcggggaagcccatctccaccagcttctgcaccttttcttccat 393
            ||||||||||| || || |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 528 acttctcaccatgtcttcagggaagcccatctcaaccagcttctgcaccttttcttccat 469

                                                                       
Query: 394 gccagtggagtcactctttgcaaacgcctcggtccaatagcgagcagtactaacaaatgt 453
           ||| ||||||  | |||||||||| ||||| ||||| ||||||||||||  |  ||||||
Sbjct: 468 gccggtggaggaattctttgcaaaggcctccgtccagtagcgagcagtagcagaaaatgt 409

                                                                       
Query: 454 ggccttgtcacgcagatactgttgtgcaacaacagcatcctgaggatcatcaggggcagg 513
           ||  | ||||||||  |||||||||||||| ||||||||||||||||||||||| |||||
Sbjct: 408 ggaatagtcacgcaagtactgttgtgcaacgacagcatcctgaggatcatcaggtgcagg 349

                                                                       
Query: 514 agcagaaagaagagcttgaagggatagcaatgccgtcttcaaggtaagggctgggctcca 573
            |||||||| |||||||| ||||| |||| |||||||||||| |||||||||||||||||
Sbjct: 348 ggcagaaagcagagcttggagggaaagcagtgccgtcttcaatgtaagggctgggctcca 289
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>dbj|AK073357.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033027F19, full
           insert sequence
          Length = 862

 Score =  317 bits (160), Expect = 2e-83
 Identities = 265/300 (88%)
 Strand = Plus / Minus

                                                                       
Query: 274 tcagccagagcagagcttctcgagagccatgttctcgtcgccgttcacgctcttcagggc 333
           ||||||||||||||||||||| |||||||||||||||||||| || || ||||||||  |
Sbjct: 679 tcagccagagcagagcttctcaagagccatgttctcgtcgccattgacactcttcagaac 620

                                                                       
Query: 334 gcttctcaccatatcctcggggaagcccatctccaccagcttctgcaccttttcttccat 393
            ||||||||||| || || |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 619 acttctcaccatgtcttcagggaagcccatctcaaccagcttctgcaccttttcttccat 560

                                                                       
Query: 394 gccagtggagtcactctttgcaaacgcctcggtccaatagcgagcagtactaacaaatgt 453
           ||| ||||||  | |||||||||| ||||| ||||| ||||||||||||  |  ||||||
Sbjct: 559 gccggtggaggaattctttgcaaaggcctccgtccagtagcgagcagtagcagaaaatgt 500

                                                                       
Query: 454 ggccttgtcacgcagatactgttgtgcaacaacagcatcctgaggatcatcaggggcagg 513
           ||  | ||||||||  |||||||||||||| ||||||||||||||||||||||| |||||
Sbjct: 499 ggaatagtcacgcaagtactgttgtgcaacgacagcatcctgaggatcatcaggtgcagg 440

                                                                       
Query: 514 agcagaaagaagagcttgaagggatagcaatgccgtcttcaaggtaagggctgggctcca 573
            |||||||| |||||||| ||||| |||| |||||||||||| |||||||||||||||||
Sbjct: 439 ggcagaaagcagagcttggagggaaagcagtgccgtcttcaatgtaagggctgggctcca 380
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>gb|BT017297.1| Zea mays clone EL01N0315H07.c mRNA sequence
          Length = 879

 Score =  307 bits (155), Expect = 2e-80
 Identities = 273/311 (87%), Gaps = 1/311 (0%)
 Strand = Plus / Minus

                                                                       
Query: 276 agccagagcagagcttctcgagagccatgttctcgtcgccgttcacgctcttcagggcgc 335
           |||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||| |
Sbjct: 671 agccagagcagagcttttcgagagccatgttctcgtcgccatccacgctcttcagggcac 612

                                                                       
Query: 336 ttctcaccatatcctcggggaagcccatctccaccagcttctgcaccttttcttccatgc 395
           ||||||||  |||||| |||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 611 ttctcacctgatcctctgggaagcccatctcaaccagcttctgcaccttctcttccatgc 552

                                                                       
Query: 396 cagtggagtcactctttgcaaacgcctcggtccaatagcgagcagtactaacaaatgtgg 455
           | || ||  ||||||| ||||| ||||| ||||| |||||||| |||    ||||||| |
Sbjct: 551 ccgttgatgcactcttcgcaaaggcctctgtccagtagcgagccgtagcggcaaatgttg 492

                                                                       
Query: 456 ccttgtcacgcagatact-gttgtgcaacaacagcatcctgaggatcatcaggggcagga 514
             | ||||||||| |||| || | ||||||||||||||||||||||||||||| ||||||
Sbjct: 491 gatagtcacgcaggtactggtggggcaacaacagcatcctgaggatcatcaggtgcagga 432

                                                                       
Query: 515 gcagaaagaagagcttgaagggatagcaatgccgtcttcaaggtaagggctgggctccac 574
           | |||||| |||||||||||||| || |  || |||||||||||||||||||||||||||
Sbjct: 431 gaagaaagcagagcttgaagggaaaggagagcagtcttcaaggtaagggctgggctccac 372

                      
Query: 575 tgatctttcag 585
           |||||||||||
Sbjct: 371 tgatctttcag 361
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>gb|AY110058.1| Zea mays CL9888_1 mRNA sequence
          Length = 1002

 Score =  170 bits (86), Expect = 3e-39
 Identities = 116/126 (92%)
 Strand = Plus / Plus

                                                                       
Query: 460 gtcacgcagatactgttgtgcaacaacagcatcctgaggatcatcaggggcaggagcaga 519
           ||||||||| |||||||| ||||||||||||||||||||||||||||| ||||||| |||
Sbjct: 468 gtcacgcaggtactgttgggcaacaacagcatcctgaggatcatcaggtgcaggagaaga 527

                                                                       
Query: 520 aagaagagcttgaagggatagcaatgccgtcttcaaggtaagggctgggctccactgatc 579
           ||| |||||||||||||| || |  || ||||||||||||||||||||||||||||||||
Sbjct: 528 aagcagagcttgaagggaaaggagagcagtcttcaaggtaagggctgggctccactgatc 587

                 
Query: 580 tttcag 585
           ||||||
Sbjct: 588 tttcag 593



 Score =  168 bits (85), Expect = 1e-38
 Identities = 112/121 (92%)
 Strand = Plus / Plus

                                                                       
Query: 276 agccagagcagagcttctcgagagccatgttctcgtcgccgttcacgctcttcagggcgc 335
           |||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||| |
Sbjct: 284 agccagagcagagcttttcgagagccatgttctcgtcgccatccacgctcttcagggcac 343

                                                                       
Query: 336 ttctcaccatatcctcggggaagcccatctccaccagcttctgcaccttttcttccatgc 395
           ||||||||  |||||| |||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 344 ttctcacctgatcctctgggaagcccatctcaaccagcttctgcaccttctcttccatgc 403

            
Query: 396 c 396
           |
Sbjct: 404 c 404
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  139 bits (70), Expect = 1e-29
 Identities = 94/102 (92%)
 Strand = Plus / Plus

                                                                            
Query: 472      ctgttgtgcaacaacagcatcctgaggatcatcaggggcaggagcagaaagaagagcttg 531
                |||||||||||| ||||||||||||||||||||||| ||||| |||||||| ||||||||
Sbjct: 40589966 ctgttgtgcaacgacagcatcctgaggatcatcaggtgcaggggcagaaagcagagcttg 40590025

                                                          
Query: 532      aagggatagcaatgccgtcttcaaggtaagggctgggctcca 573
                 ||||| |||| |||||||||||| |||||||||||||||||
Sbjct: 40590026 gagggaaagcagtgccgtcttcaatgtaagggctgggctcca 40590067



 Score =  131 bits (66), Expect = 3e-27
 Identities = 99/110 (90%)
 Strand = Plus / Plus

                                                                            
Query: 274      tcagccagagcagagcttctcgagagccatgttctcgtcgccgttcacgctcttcagggc 333
                ||||||||||||||||||||| |||||||||||||||||||| || || ||||||||  |
Sbjct: 40588611 tcagccagagcagagcttctcaagagccatgttctcgtcgccattgacactcttcagaac 40588670

                                                                  
Query: 334      gcttctcaccatatcctcggggaagcccatctccaccagcttctgcacct 383
                 ||||||||||| || || |||||||||||||| ||||||||||||||||
Sbjct: 40588671 acttctcaccatgtcttcagggaagcccatctcaaccagcttctgcacct 40588720



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 56/63 (88%)
 Strand = Plus / Plus

                                                                            
Query: 380      accttttcttccatgccagtggagtcactctttgcaaacgcctcggtccaatagcgagca 439
                ||||||||||||||||| ||||||  | |||||||||| ||||| ||||| |||||||||
Sbjct: 40588810 accttttcttccatgccggtggaggaattctttgcaaaggcctccgtccagtagcgagca 40588869

                   
Query: 440      gta 442
                |||
Sbjct: 40588870 gta 40588872
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>dbj|AP004332.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0093F16
          Length = 160925

 Score =  139 bits (70), Expect = 1e-29
 Identities = 94/102 (92%)
 Strand = Plus / Plus

                                                                         
Query: 472   ctgttgtgcaacaacagcatcctgaggatcatcaggggcaggagcagaaagaagagcttg 531
             |||||||||||| ||||||||||||||||||||||| ||||| |||||||| ||||||||
Sbjct: 31944 ctgttgtgcaacgacagcatcctgaggatcatcaggtgcaggggcagaaagcagagcttg 32003

                                                       
Query: 532   aagggatagcaatgccgtcttcaaggtaagggctgggctcca 573
              ||||| |||| |||||||||||| |||||||||||||||||
Sbjct: 32004 gagggaaagcagtgccgtcttcaatgtaagggctgggctcca 32045



 Score =  131 bits (66), Expect = 3e-27
 Identities = 99/110 (90%)
 Strand = Plus / Plus

                                                                         
Query: 274   tcagccagagcagagcttctcgagagccatgttctcgtcgccgttcacgctcttcagggc 333
             ||||||||||||||||||||| |||||||||||||||||||| || || ||||||||  |
Sbjct: 30589 tcagccagagcagagcttctcaagagccatgttctcgtcgccattgacactcttcagaac 30648

                                                               
Query: 334   gcttctcaccatatcctcggggaagcccatctccaccagcttctgcacct 383
              ||||||||||| || || |||||||||||||| ||||||||||||||||
Sbjct: 30649 acttctcaccatgtcttcagggaagcccatctcaaccagcttctgcacct 30698



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 56/63 (88%)
 Strand = Plus / Plus

                                                                         
Query: 380   accttttcttccatgccagtggagtcactctttgcaaacgcctcggtccaatagcgagca 439
             ||||||||||||||||| ||||||  | |||||||||| ||||| ||||| |||||||||
Sbjct: 30788 accttttcttccatgccggtggaggaattctttgcaaaggcctccgtccagtagcgagca 30847

                
Query: 440   gta 442
             |||
Sbjct: 30848 gta 30850
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>dbj|AP003262.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0482D04
          Length = 144583

 Score =  139 bits (70), Expect = 1e-29
 Identities = 94/102 (92%)
 Strand = Plus / Plus

                                                                         
Query: 472   ctgttgtgcaacaacagcatcctgaggatcatcaggggcaggagcagaaagaagagcttg 531
             |||||||||||| ||||||||||||||||||||||| ||||| |||||||| ||||||||
Sbjct: 69981 ctgttgtgcaacgacagcatcctgaggatcatcaggtgcaggggcagaaagcagagcttg 70040

                                                       
Query: 532   aagggatagcaatgccgtcttcaaggtaagggctgggctcca 573
              ||||| |||| |||||||||||| |||||||||||||||||
Sbjct: 70041 gagggaaagcagtgccgtcttcaatgtaagggctgggctcca 70082



 Score =  131 bits (66), Expect = 3e-27
 Identities = 99/110 (90%)
 Strand = Plus / Plus

                                                                         
Query: 274   tcagccagagcagagcttctcgagagccatgttctcgtcgccgttcacgctcttcagggc 333
             ||||||||||||||||||||| |||||||||||||||||||| || || ||||||||  |
Sbjct: 68626 tcagccagagcagagcttctcaagagccatgttctcgtcgccattgacactcttcagaac 68685

                                                               
Query: 334   gcttctcaccatatcctcggggaagcccatctccaccagcttctgcacct 383
              ||||||||||| || || |||||||||||||| ||||||||||||||||
Sbjct: 68686 acttctcaccatgtcttcagggaagcccatctcaaccagcttctgcacct 68735



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 56/63 (88%)
 Strand = Plus / Plus

                                                                         
Query: 380   accttttcttccatgccagtggagtcactctttgcaaacgcctcggtccaatagcgagca 439
             ||||||||||||||||| ||||||  | |||||||||| ||||| ||||| |||||||||
Sbjct: 68825 accttttcttccatgccggtggaggaattctttgcaaaggcctccgtccagtagcgagca 68884

                
Query: 440   gta 442
             |||
Sbjct: 68885 gta 68887
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>gb|AC146747.7| Medicago truncatula clone mth2-14h5, complete sequence
          Length = 129204

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 93/109 (85%)
 Strand = Plus / Minus

                                                                         
Query: 476   tgtgcaacaacagcatcctgaggatcatcaggggcaggagcagaaagaagagcttgaagg 535
             ||||| ||||||||||| ||||||||||||||   ||||||||||||||| ||||| | |
Sbjct: 75858 tgtgccacaacagcatcttgaggatcatcaggttgaggagcagaaagaagtgcttgcacg 75799

                                                              
Query: 536   gatagcaatgccgtcttcaaggtaagggctgggctccactgatctttca 584
             || || | ||| |||||||  ||||| || |||||||||||||||||||
Sbjct: 75798 gaaagtagtgcagtcttcagagtaagtgccgggctccactgatctttca 75750
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>gb|AF458962.1|AF458962 Zea mays CDC5 protein (CDC5) mRNA, complete cds
          Length = 3188

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 88/105 (83%)
 Strand = Plus / Minus

                                                                        
Query: 476  tgtgcaacaacagcatcctgaggatcatcaggggcaggagcagaaagaagagcttgaagg 535
            |||||||||||| |||| ||| ||||  |||| || |||| ||||||  |||||| ||||
Sbjct: 3004 tgtgcaacaacaacatcgtgaagatcgccaggtgcgggagaagaaagcggagctttaagg 2945

                                                         
Query: 536  gatagcaatgccgtcttcaaggtaagggctgggctccactgatct 580
            || || |  ||||||||||||| |||||||||||| |||||||||
Sbjct: 2944 gaaaggagcgccgtcttcaaggcaagggctgggcttcactgatct 2900
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>gb|DQ241834.1| Solanum tuberosum clone 180C02 ubiquitin conjugating enzyme-like
           mRNA, complete cds
          Length = 1163

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 51/56 (91%)
 Strand = Plus / Minus

                                                                   
Query: 467 agatactgttgtgcaacaacagcatcctgaggatcatcaggggcaggagcagaaag 522
           |||||||||||||||||||| ||||| || |||||||||||  |||||||||||||
Sbjct: 474 agatactgttgtgcaacaactgcatcttgtggatcatcaggttcaggagcagaaag 419
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>gb|DQ284494.1| Solanum tuberosum clone 063D04 ubiquitin-conjugating protein-like
           mRNA, complete cds
          Length = 808

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 51/56 (91%)
 Strand = Plus / Minus

                                                                   
Query: 467 agatactgttgtgcaacaacagcatcctgaggatcatcaggggcaggagcagaaag 522
           |||||||||||||||||||| ||||| || |||||||||||  |||||||||||||
Sbjct: 476 agatactgttgtgcaacaactgcatcttgtggatcatcaggttcaggagcagaaag 421
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>emb|X82938.1|LEUBC1 L.esculentum mRNA for ubiquitin conjugating enzyme
          Length = 923

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 50/56 (89%)
 Strand = Plus / Minus

                                                                   
Query: 467 agatactgttgtgcaacaacagcatcctgaggatcatcaggggcaggagcagaaag 522
           |||||||| ||||||||||| ||||| || |||||||||||  |||||||||||||
Sbjct: 451 agatactgctgtgcaacaactgcatcttgtggatcatcaggttcaggagcagaaag 396
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 74/90 (82%)
 Strand = Plus / Plus

                                                                            
Query: 274      tcagccagagcagagcttctcgagagccatgttctcgtcgccgttcacgctcttcagggc 333
                |||| ||||||||||||| || |||  |||||||||||||||||  ||  ||||||| ||
Sbjct: 26423680 tcagacagagcagagcttttcaagaatcatgttctcgtcgccgtcgacaatcttcagagc 26423739

                                              
Query: 334      gcttctcaccatatcctcggggaagcccat 363
                 || ||||| || || || |||||||||||
Sbjct: 26423740 actcctcacgatgtcttcagggaagcccat 26423769
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>dbj|AP003920.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1789_C07
          Length = 138944

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 74/90 (82%)
 Strand = Plus / Plus

                                                                         
Query: 274   tcagccagagcagagcttctcgagagccatgttctcgtcgccgttcacgctcttcagggc 333
             |||| ||||||||||||| || |||  |||||||||||||||||  ||  ||||||| ||
Sbjct: 73232 tcagacagagcagagcttttcaagaatcatgttctcgtcgccgtcgacaatcttcagagc 73291

                                           
Query: 334   gcttctcaccatatcctcggggaagcccat 363
              || ||||| || || || |||||||||||
Sbjct: 73292 actcctcacgatgtcttcagggaagcccat 73321
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>dbj|AP004015.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1770_H02
          Length = 170648

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 74/90 (82%)
 Strand = Plus / Plus

                                                                          
Query: 274    tcagccagagcagagcttctcgagagccatgttctcgtcgccgttcacgctcttcagggc 333
              |||| ||||||||||||| || |||  |||||||||||||||||  ||  ||||||| ||
Sbjct: 153261 tcagacagagcagagcttttcaagaatcatgttctcgtcgccgtcgacaatcttcagagc 153320

                                            
Query: 334    gcttctcaccatatcctcggggaagcccat 363
               || ||||| || || || |||||||||||
Sbjct: 153321 actcctcacgatgtcttcagggaagcccat 153350
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>dbj|AK064897.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000L10, full
            insert sequence
          Length = 2314

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 74/90 (82%)
 Strand = Plus / Minus

                                                                        
Query: 274  tcagccagagcagagcttctcgagagccatgttctcgtcgccgttcacgctcttcagggc 333
            |||| ||||||||||||| || |||  |||||||||||||||||  ||  ||||||| ||
Sbjct: 2113 tcagacagagcagagcttttcaagaatcatgttctcgtcgccgtcgacaatcttcagagc 2054

                                          
Query: 334  gcttctcaccatatcctcggggaagcccat 363
             || ||||| || || || |||||||||||
Sbjct: 2053 actcctcacgatgtcttcagggaagcccat 2024
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>ref|XM_508970.1| PREDICTED: Pan troglodytes similar to Ubiquitin carboxyl-terminal
            hydrolase 5 (Ubiquitin thiolesterase 5)
            (Ubiquitin-specific processing protease 5)
            (Deubiquitinating enzyme 5) (Isopeptidase T) (LOC451798),
            mRNA
          Length = 2825

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 353  gggaagcccatctccaccagct 374
            ||||||||||||||||||||||
Sbjct: 1760 gggaagcccatctccaccagct 1739
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>ref|XM_543845.2| PREDICTED: Canis familiaris similar to Ubiquitin isopeptidase T,
            transcript variant 1 (LOC486718), mRNA
          Length = 3201

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 353  gggaagcccatctccaccagct 374
            ||||||||||||||||||||||
Sbjct: 2055 gggaagcccatctccaccagct 2034
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>ref|XM_862321.1| PREDICTED: Canis familiaris similar to Ubiquitin isopeptidase T,
            transcript variant 4 (LOC486718), mRNA
          Length = 3045

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 353  gggaagcccatctccaccagct 374
            ||||||||||||||||||||||
Sbjct: 1899 gggaagcccatctccaccagct 1878
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>ref|XM_862310.1| PREDICTED: Canis familiaris similar to Ubiquitin isopeptidase T,
           transcript variant 3 (LOC486718), mRNA
          Length = 1856

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 353 gggaagcccatctccaccagct 374
           ||||||||||||||||||||||
Sbjct: 634 gggaagcccatctccaccagct 613
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>ref|XM_862300.1| PREDICTED: Canis familiaris similar to Ubiquitin isopeptidase T,
            transcript variant 2 (LOC486718), mRNA
          Length = 3132

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 353  gggaagcccatctccaccagct 374
            ||||||||||||||||||||||
Sbjct: 1986 gggaagcccatctccaccagct 1965
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>emb|CR861453.1| Pongo pygmaeus mRNA; cDNA DKFZp459D032 (from clone DKFZp459D032)
          Length = 3180

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 353  gggaagcccatctccaccagct 374
            ||||||||||||||||||||||
Sbjct: 2039 gggaagcccatctccaccagct 2018
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>ref|XM_588574.2| PREDICTED: Bos taurus similar to protocadherin gamma subfamily A, 6
            isoform 1 precursor (LOC511274), mRNA
          Length = 4536

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 70   atgacaaaggcaaggaagaca 90
            |||||||||||||||||||||
Sbjct: 4199 atgacaaaggcaaggaagaca 4179
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>gb|AC128663.4| Mus musculus BAC clone RP24-263E2 from chromosome 8, complete sequence
          Length = 197679

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 39    gggtctgggtggaagggaagg 59
             |||||||||||||||||||||
Sbjct: 99223 gggtctgggtggaagggaagg 99203
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>gb|AC083869.2|AC083869 Homo sapiens chromosome 7 clone RP11-733N14, complete sequence
          Length = 172237

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 564   ctgggctccactgatctttca 584
             |||||||||||||||||||||
Sbjct: 69021 ctgggctccactgatctttca 69041
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>gb|AC009541.16|AC009541 Human Chromosome 7 clone RP11-233L24, complete sequence
          Length = 150467

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 564   ctgggctccactgatctttca 584
             |||||||||||||||||||||
Sbjct: 38740 ctgggctccactgatctttca 38720
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>ref|XM_875102.1| PREDICTED: Bos taurus similar to zinc finger protein 71, transcript
           variant 8 (LOC509356), mRNA
          Length = 1885

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 266 caaggccttcagccagagca 285
           ||||||||||||||||||||
Sbjct: 500 caaggccttcagccagagca 519
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>ref|XM_875017.1| PREDICTED: Bos taurus similar to zinc finger protein 71, transcript
           variant 7 (LOC509356), mRNA
          Length = 1987

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 266 caaggccttcagccagagca 285
           ||||||||||||||||||||
Sbjct: 500 caaggccttcagccagagca 519
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>ref|XM_874941.1| PREDICTED: Bos taurus similar to zinc finger protein 71, transcript
           variant 6 (LOC509356), mRNA
          Length = 1969

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 266 caaggccttcagccagagca 285
           ||||||||||||||||||||
Sbjct: 500 caaggccttcagccagagca 519
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>ref|XM_874861.1| PREDICTED: Bos taurus similar to zinc finger protein 71, transcript
           variant 5 (LOC509356), mRNA
          Length = 1966

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 266 caaggccttcagccagagca 285
           ||||||||||||||||||||
Sbjct: 500 caaggccttcagccagagca 519
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>ref|XM_874774.1| PREDICTED: Bos taurus similar to zinc finger protein 71, transcript
           variant 4 (LOC509356), mRNA
          Length = 1969

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 266 caaggccttcagccagagca 285
           ||||||||||||||||||||
Sbjct: 500 caaggccttcagccagagca 519
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>ref|XM_874692.1| PREDICTED: Bos taurus similar to zinc finger protein 71, transcript
           variant 3 (LOC509356), mRNA
          Length = 1969

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 266 caaggccttcagccagagca 285
           ||||||||||||||||||||
Sbjct: 500 caaggccttcagccagagca 519
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>ref|XM_874604.1| PREDICTED: Bos taurus similar to zinc finger protein 71, transcript
           variant 2 (LOC509356), mRNA
          Length = 2053

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 266 caaggccttcagccagagca 285
           ||||||||||||||||||||
Sbjct: 500 caaggccttcagccagagca 519
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>ref|XM_586296.2| PREDICTED: Bos taurus similar to zinc finger protein 71, transcript
           variant 1 (LOC509356), mRNA
          Length = 2902

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 266 caaggccttcagccagagca 285
           ||||||||||||||||||||
Sbjct: 500 caaggccttcagccagagca 519
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>gb|AY345879.1| Homo sapiens chromosome 19 YAC/BAC clone TAR1-1, complete sequence
          Length = 15742

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 510   caggagcagaaagaagagct 529
             ||||||||||||||||||||
Sbjct: 13665 caggagcagaaagaagagct 13684
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>gb|AY150217.1| Ambystoma tigrinum stebbensi virus, complete genome
          Length = 106332

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 499   atcatcaggggcaggagcag 518
             ||||||||||||||||||||
Sbjct: 29496 atcatcaggggcaggagcag 29477
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>gb|AC104094.4| Homo sapiens BAC clone RP11-1383E23 from 7, complete sequence
          Length = 38437

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 266   caaggccttcagccagagcagagc 289
             |||| |||||||||||||||||||
Sbjct: 36023 caagaccttcagccagagcagagc 36046
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>emb|AL035697.19|HS45F6 Human DNA sequence from clone RP1-45F6 on chromosome 6q25.3-27
           Contains part of the PARK2 gene for Parkinson disease
           (autosomal recessive, juvenile) 2, parkin (PDJ, PRKN,
           AR-JP), complete sequence
          Length = 134780

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 76  aaggcaaggaagacagtctg 95
           ||||||||||||||||||||
Sbjct: 207 aaggcaaggaagacagtctg 226
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>gb|AC125257.4| Homo sapiens chromosome , clone RP11-229E13, complete sequence
          Length = 159726

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 275   cagccagagcagagcttctc 294
             ||||||||||||||||||||
Sbjct: 48635 cagccagagcagagcttctc 48654
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>emb|BX572101.1| Prochlorococcus marinus MIT9313 complete genome; segment 7/7
          Length = 318136

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 356   aagcccatctccaccagctt 375
             ||||||||||||||||||||
Sbjct: 34936 aagcccatctccaccagctt 34917
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>emb|AL645783.13| Mouse DNA sequence from clone RP23-459H16 on chromosome 13 Contains the
             Foxc1 gene for forkhead box C1, a novel gene, the 3' end
             of the Gmds gene forGDP-mannose 4,6-dehydratase and two
             CpG islands, complete sequence
          Length = 98685

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 515   gcagaaagaagagcttgaag 534
             ||||||||||||||||||||
Sbjct: 60113 gcagaaagaagagcttgaag 60132
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>emb|AJ010592.2|GTAJ10592 Guillardia theta DNA for complete sequence of nucleomorph chromosome 2
          Length = 180915

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 560    agggctgggctccactgatc 579
              ||||||||||||||||||||
Sbjct: 168363 agggctgggctccactgatc 168382



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 560   agggctgggctccactgatc 579
             ||||||||||||||||||||
Sbjct: 12553 agggctgggctccactgatc 12534
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>gb|AC009374.7| Drosophila melanogaster 3L BAC RP98-4J11 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 164719

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 499   atcatcaggggcaggagcag 518
             ||||||||||||||||||||
Sbjct: 38427 atcatcaggggcaggagcag 38408
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>ref|XM_941263.1| PREDICTED: Homo sapiens similar to SHC transforming protein 2 (SH2
           domain protein C2) (Src homology 2 domain containing
           transforming protein C2) (Protein Sck) (LOC651974), mRNA
          Length = 687

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 510 caggagcagaaagaagagct 529
           ||||||||||||||||||||
Sbjct: 671 caggagcagaaagaagagct 652
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>gb|AF083031.2|AF083031 Guillardia theta nucleomorph chromosome 3, complete sequence
          Length = 174133

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 560    agggctgggctccactgatc 579
              ||||||||||||||||||||
Sbjct: 161581 agggctgggctccactgatc 161600



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 560   agggctgggctccactgatc 579
             ||||||||||||||||||||
Sbjct: 12553 agggctgggctccactgatc 12534
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>gb|AF165818.4|AF165818 Guillardia theta nucleomorph chromosome 1, complete sequence
          Length = 196216

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 560   agggctgggctccactgatc 579
             ||||||||||||||||||||
Sbjct: 12553 agggctgggctccactgatc 12534
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>gb|AC138433.2| Homo sapiens chromosome 19 clone XXfos-85899E4, complete sequence
          Length = 38016

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 510   caggagcagaaagaagagct 529
             ||||||||||||||||||||
Sbjct: 19648 caggagcagaaagaagagct 19667
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>ref|XM_213539.3| PREDICTED: Rattus norvegicus similar to p150 target of rapamycin
            (TOR)-scaffold protein containing WD-repeats (predicted)
            (LOC287871), mRNA
          Length = 6080

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 39   gggtctgggtggaagggaag 58
            ||||||||||||||||||||
Sbjct: 6034 gggtctgggtggaagggaag 6053
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>gb|AC091172.11| Homo sapiens chromosome 17, clone RP11-156E6, complete sequence
          Length = 178345

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 275    cagccagagcagagcttctc 294
              ||||||||||||||||||||
Sbjct: 101181 cagccagagcagagcttctc 101200
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>gb|AF075703.1|AF075703 HIV-1 isolate FIN9363 subtype F1 from Finland, complete genome
          Length = 8925

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 508  ggcaggagcagaaagaagag 527
            ||||||||||||||||||||
Sbjct: 1539 ggcaggagcagaaagaagag 1558
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>emb|AL136293.5|CNS01DVX Human chromosome 14 DNA sequence BAC C-2555C10 of library CalTech-D
             from chromosome 14 of Homo sapiens (Human), complete
             sequence
          Length = 226035

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 268   aggccttcagccagagcaga 287
             ||||||||||||||||||||
Sbjct: 62518 aggccttcagccagagcaga 62499
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>gb|AE003524.5| Drosophila melanogaster chromosome 3L, section 61 of 83 of the complete
              sequence
          Length = 425677

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 499    atcatcaggggcaggagcag 518
              ||||||||||||||||||||
Sbjct: 230756 atcatcaggggcaggagcag 230775
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>gb|AE000657.1| Aquifex aeolicus VF5, complete genome
          Length = 1551335

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 520     aagaagagcttgaagggata 539
               ||||||||||||||||||||
Sbjct: 1350941 aagaagagcttgaagggata 1350960


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,681,168
Number of Sequences: 3902068
Number of extensions: 4681168
Number of successful extensions: 93968
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 93823
Number of HSP's gapped (non-prelim): 144
length of query: 585
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 562
effective length of database: 17,143,297,704
effective search space: 9634533309648
effective search space used: 9634533309648
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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