Clone Name	bags12c01
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	RS9_PODAN (P52810) 40S ribosomal protein S9 (S7)	219	4e-57
2	RS9_RAT (P29314) 40S ribosomal protein S9	218	5e-57
3	RS9_MOUSE (Q6ZWN5) 40S ribosomal protein S9	218	5e-57
4	RS9_HUMAN (P46781) 40S ribosomal protein S9	218	5e-57
5	RS9_DROME (P55935) 40S ribosomal protein S9	214	8e-56
6	RS9_DICDI (P14132) 40S ribosomal protein S9 (40S ribosomal prote...	213	3e-55
7	RS9B_SCHPO (O59675) 40S ribosomal protein S9-B	210	2e-54
8	RS9A_SCHPO (Q09757) 40S ribosomal protein S9-A	209	3e-54
9	RS9B_YEAST (P05755) 40S ribosomal protein S9-B (S13) (YS11) (RP2...	206	3e-53
10	RS9_CAEEL (Q20228) 40S ribosomal protein S9	205	5e-53
11	RS9A_YEAST (O13516) 40S ribosomal protein S9-A (S13) (YS11) (RP2...	205	6e-53
12	RS9_TRYBB (P17959) Probable 40S ribosomal protein S9	197	1e-50
13	RS9_NAEFO (Q25555) 40S ribosomal protein S9	196	4e-50
14	RS9_PIG (Q29197) 40S ribosomal protein S9 (Fragment)	168	6e-42
15	RS9_ENTHI (O15612) 40S ribosomal protein S9 (Fragment)	157	2e-38
16	RS4_METKA (Q8TVC0) 30S ribosomal protein S4P	116	3e-26
17	RS4_THEAC (Q9HJD7) 30S ribosomal protein S4P	112	4e-25
18	RS4_METJA (P54020) 30S ribosomal protein S4P	108	6e-24
19	RS4_PICTO (Q6KZP7) 30S ribosomal protein S4P	107	2e-23
20	RS4_THEVO (Q97B95) 30S ribosomal protein S4P	107	2e-23
21	RS4_AERPE (Q9YB58) 30S ribosomal protein S4P	107	2e-23
22	RS4_PYRHO (O59306) 30S ribosomal protein S4P	103	2e-22
23	RS4_PYRFU (P61993) 30S ribosomal protein S4P	103	3e-22
24	RS4_PYRAB (P61992) 30S ribosomal protein S4P	103	3e-22
25	RS4_ARCFU (O28000) 30S ribosomal protein S4P	102	4e-22
26	RS4_SULTO (Q96YV8) 30S ribosomal protein S4P	102	7e-22
27	RS4_SULSO (P95987) 30S ribosomal protein S4P	101	1e-21
28	RS4_SULAC (P39467) 30S ribosomal protein S4P	100	2e-21
29	RS4_METBF (Q46GC8) 30S ribosomal protein S4P	98	1e-20
30	RS4_PYRKO (Q5JJF2) 30S ribosomal protein S4P	98	1e-20
31	RS4_PYRAE (Q8ZTV1) 30S ribosomal protein S4P	97	2e-20
32	RS4_NANEQ (Q74NF7) 30S ribosomal protein S4P	95	1e-19
33	RS4_METTH (O26142) 30S ribosomal protein S4P	94	3e-19
34	RS4_METMA (Q8PV18) 30S ribosomal protein S4P	90	3e-18
35	RS4_HALSA (Q9HQJ6) 30S ribosomal protein S4P	90	3e-18
36	RS4_METMP (Q6LXN0) 30S ribosomal protein S4P	90	4e-18
37	RS4_METAC (Q8TRR1) 30S ribosomal protein S4P	89	6e-18
38	RS4_HALMA (Q00862) 30S ribosomal protein S4P (HmaS4)	89	8e-18
39	RS4_NATPD (Q3IQT8) 30S ribosomal protein S4P	86	7e-17
40	RS9_TOBAC (P49214) 40S ribosomal protein S9 (S4) (Fragment)	81	1e-15
41	IMP3_MOUSE (Q921Y2) U3 small nucleolar ribonucleoprotein protein...	70	4e-12
42	IMP3_BOVIN (Q3T0M3) U3 small nucleolar ribonucleoprotein protein...	69	5e-12
43	IMP3_HUMAN (Q9NV31) U3 small nucleolar ribonucleoprotein protein...	65	1e-10
44	YS4L_CAEEL (O01513) Putative 40S ribosomal protein S4-like	52	7e-07
45	RS4_PELCD (Q3A6M1) 30S ribosomal protein S4	49	6e-06
46	RS4A_SYMTH (Q67JX0) 30S ribosomal protein S4 A	49	7e-06
47	RR4_BRYCA (P59135) Chloroplast 30S ribosomal protein S4	49	1e-05
48	IMP3_YEAST (P32899) U3 small nucleolar ribonucleoprotein protein...	48	2e-05
49	IMP3_SCHPO (O13835) U3 small nucleolar ribonucleoprotein protein...	48	2e-05
50	RS4_FUSNN (Q8RE43) 30S ribosomal protein S4	48	2e-05
51	RR4A_CYACA (Q9TLY7) Chloroplast 30S ribosomal protein S4	47	3e-05
52	RR4_FUNHY (Q9SMG1) Chloroplast 30S ribosomal protein S4	47	4e-05
53	RR4_DENGI (P36454) Chloroplast 30S ribosomal protein S4 (Fragment)	46	5e-05
54	RR4_PHYPA (Q6YXP3) Chloroplast 30S ribosomal protein S4	46	5e-05
55	RS4_CARHZ (Q3A9U3) 30S ribosomal protein S4	46	5e-05
56	RR4_LEUSC (P59146) Chloroplast 30S ribosomal protein S4	46	6e-05
57	RR4_HUPLU (Q5SD08) Chloroplast 30S ribosomal protein S4	46	6e-05
58	RR4_HOOLU (P59139) Chloroplast 30S ribosomal protein S4	46	6e-05
59	RR4_BUCRO (Q9FT08) Chloroplast 30S ribosomal protein S4	46	6e-05
60	RR4_STICA (P36472) Chloroplast 30S ribosomal protein S4 (Fragment)	45	8e-05
61	RR4_MELUN (P36466) Chloroplast 30S ribosomal protein S4 (Fragment)	45	8e-05
62	RR4_MELAL (P36465) Chloroplast 30S ribosomal protein S4 (Fragment)	45	8e-05
63	RR4_OENHO (Q9MTP1) Chloroplast 30S ribosomal protein S4	45	8e-05
64	RR4_LYGSP (P36464) Chloroplast 30S ribosomal protein S4 (Fragment)	45	1e-04
65	RR4_SOYBN (Q2PMU5) Chloroplast 30S ribosomal protein S4	45	1e-04
66	RR4_CUCSA (Q4VZH3) Chloroplast 30S ribosomal protein S4	45	1e-04
67	RS4_CAMJR (Q5HSJ7) 30S ribosomal protein S4	45	1e-04
68	RS4_CAMJE (Q9PM81) 30S ribosomal protein S4	45	1e-04
69	RS4B_NITEU (Q82T00) 30S ribosomal protein S4 B	45	1e-04
70	RR4_WATAN (O20399) Chloroplast 30S ribosomal protein S4 (Fragment)	45	1e-04
71	RR4_SPLSP (Q9FS90) Chloroplast 30S ribosomal protein S4	45	1e-04
72	RR4_DIPFO (Q9M4B9) Chloroplast 30S ribosomal protein S4	45	1e-04
73	RR4_DIERO (O20210) Chloroplast 30S ribosomal protein S4 (Fragment)	45	1e-04
74	RR4_DIEGR (O20208) Chloroplast 30S ribosomal protein S4 (Fragment)	45	1e-04
75	RR4_WHEAT (Q95H61) Chloroplast 30S ribosomal protein S4	45	1e-04
76	RR4_LOTJA (Q9BBT5) Chloroplast 30S ribosomal protein S4	45	1e-04
77	RR4_CALFE (Q7YJX0) Chloroplast 30S ribosomal protein S4	45	1e-04
78	RS4_BACHD (Q9K7Z8) 30S ribosomal protein S4	45	1e-04
79	RR4_TRARA (P36473) Chloroplast 30S ribosomal protein S4 (Fragment)	45	1e-04
80	RR4_PHLPR (P69648) Chloroplast 30S ribosomal protein S4 (Fragment)	45	1e-04
81	RR4_LOLPR (P69646) Chloroplast 30S ribosomal protein S4 (Fragment)	45	1e-04
82	RR4_LAMAU (P69645) Chloroplast 30S ribosomal protein S4 (Fragment)	45	1e-04
83	RR4_HORMA (P69644) Chloroplast 30S ribosomal protein S4 (Fragment)	45	1e-04
84	RR4_FESPR (P36459) Chloroplast 30S ribosomal protein S4 (Fragment)	45	1e-04
85	RR4_FESGI (P69642) Chloroplast 30S ribosomal protein S4 (Fragment)	45	1e-04
86	RR4_ELYCA (P69641) Chloroplast 30S ribosomal protein S4 (Fragment)	45	1e-04
87	RR4_ELEIN (P36456) Chloroplast 30S ribosomal protein S4 (Fragment)	45	1e-04
88	RR4_DESFL (P69640) Chloroplast 30S ribosomal protein S4 (Fragment)	45	1e-04
89	RR4_CINLA (P69638) Chloroplast 30S ribosomal protein S4 (Fragment)	45	1e-04
90	RR4_CALEP (P69637) Chloroplast 30S ribosomal protein S4 (Fragment)	45	1e-04
91	RR4_BROER (P36451) Chloroplast 30S ribosomal protein S4 (Fragment)	45	1e-04
92	RR4_ALOPR (P69630) Chloroplast 30S ribosomal protein S4 (Fragment)	45	1e-04
93	RR4_BRASY (P69636) Chloroplast 30S ribosomal protein S4 (Fragment)	44	2e-04
94	RR4_BRAPI (P69635) Chloroplast 30S ribosomal protein S4 (Fragment)	44	2e-04
95	RS4_BACTN (Q8A4A1) 30S ribosomal protein S4	44	2e-04
96	RS4_BACFR (Q64NN4) 30S ribosomal protein S4	44	2e-04
97	RS4_BACFN (Q5L8D5) 30S ribosomal protein S4	44	2e-04
98	RR4_TOBAC (P06359) Chloroplast 30S ribosomal protein S4	44	2e-04
99	RR4_ORYSA (P12147) Chloroplast 30S ribosomal protein S4	44	2e-04
100	RR4_ORYNI (Q6ENH2) Chloroplast 30S ribosomal protein S4	44	2e-04
101	RR4_NICTO (Q33C33) Chloroplast 30S ribosomal protein S4	44	2e-04
102	RR4_NICSY (Q3C1H5) Chloroplast 30S ribosomal protein S4	44	2e-04
103	RR4_LACSA (Q332X6) Chloroplast 30S ribosomal protein S4	44	2e-04
104	RR4_CHLRE (P48270) Chloroplast 30S ribosomal protein S4	44	2e-04
105	RR4_ATRBE (Q8S8X2) Chloroplast 30S ribosomal protein S4	44	2e-04
106	RT04_RECAM (O21263) Mitochondrial ribosomal protein S4	44	2e-04
107	RR4_SPHDO (Q9FSA4) Chloroplast 30S ribosomal protein S4	44	2e-04
108	RR4_HYPAR (P59141) Chloroplast 30S ribosomal protein S4	44	2e-04
109	RR4_HYLSP (P59140) Chloroplast 30S ribosomal protein S4	44	2e-04
110	RR4_OROMI (O78678) Plastid 30S ribosomal protein S4	44	2e-04
111	RS4_PORGI (Q7MTN9) 30S ribosomal protein S4	44	2e-04
112	RR4_SPIOL (P13788) Chloroplast 30S ribosomal protein S4	44	2e-04
113	RR4_SOLTU (Q2VEH5) Chloroplast 30S ribosomal protein S4	44	2e-04
114	RR4_SOLBU (Q2MII5) Chloroplast 30S ribosomal protein S4	44	2e-04
115	RR4_PHAAO (Q3BAN8) Chloroplast 30S ribosomal protein S4	44	2e-04
116	RR4_LYCES (Q2MI98) Chloroplast 30S ribosomal protein S4	44	2e-04
117	RR4_EUCGG (Q49KZ6) Chloroplast 30S ribosomal protein S4	44	2e-04
118	RR4_AMBTC (Q70Y01) Chloroplast 30S ribosomal protein S4	44	2e-04
119	RR4_RHAHU (P36470) Chloroplast 30S ribosomal protein S4 (Fragment)	44	3e-04
120	RR4_ANTOD (P36447) Chloroplast 30S ribosomal protein S4 (Fragment)	44	3e-04
121	RR4_CATCI (P59137) Chloroplast 30S ribosomal protein S4	44	3e-04
122	RS4_DESPS (Q6AP44) 30S ribosomal protein S4	43	4e-04
123	RS4_UREPA (Q9PPZ2) 30S ribosomal protein S4	43	4e-04
124	RR4_TIGSP (O36057) Chloroplast 30S ribosomal protein S4 (Fragment)	43	4e-04
125	RR4_NEOSP (O36051) Chloroplast 30S ribosomal protein S4 (Fragment)	43	4e-04
126	RR4_LIBFO (O20254) Chloroplast 30S ribosomal protein S4 (Fragment)	43	4e-04
127	RR4_ISOTA (O20236) Chloroplast 30S ribosomal protein S4 (Fragment)	43	4e-04
128	RR4_IRILU (O20235) Chloroplast 30S ribosomal protein S4 (Fragment)	43	4e-04
129	RR4_CANTA (P59136) Chloroplast 30S ribosomal protein S4	43	4e-04
130	RR4_ALOVE (O19986) Chloroplast 30S ribosomal protein S4 (Fragment)	43	4e-04
131	RS4_THEFY (Q47R66) 30S ribosomal protein S4	43	4e-04
132	RS4_STRCO (Q9KXP5) 30S ribosomal protein S4	43	4e-04
133	RR4_YUCFI (P69679) Chloroplast 30S ribosomal protein S4 (Fragment)	43	4e-04
134	RR4_IRIPA (P36461) Chloroplast 30S ribosomal protein S4 (Fragment)	43	4e-04
135	RR4_ASPSB (O47026) Chloroplast 30S ribosomal protein S4 (Fragment)	43	4e-04
136	RR4_AGABR (P69629) Chloroplast 30S ribosomal protein S4 (Fragment)	43	4e-04
137	RR4_STAPU (Q32RY4) Chloroplast 30S ribosomal protein S4	43	4e-04
138	RR4_SISST (P69652) Chloroplast 30S ribosomal protein S4 (Fragment)	43	4e-04
139	RR4_SISSP (P69651) Chloroplast 30S ribosomal protein S4 (Fragment)	43	4e-04
140	RR4_CYPSP (O20106) Chloroplast 30S ribosomal protein S4 (Fragment)	43	4e-04
141	RR4_HYPFI (P59144) Chloroplast 30S ribosomal protein S4	43	5e-04
142	RR4_NERBO (O20265) Chloroplast 30S ribosomal protein S4 (Fragment)	43	5e-04
143	RR4_HYMLI (O20230) Chloroplast 30S ribosomal protein S4 (Fragment)	43	5e-04
144	RR4_HEAMA (O20231) Chloroplast 30S ribosomal protein S4 (Fragment)	43	5e-04
145	RS4_LACAC (Q5FKX2) 30S ribosomal protein S4	43	5e-04
146	RR4_SACOF (Q6ENW1) Chloroplast 30S ribosomal protein S4	43	5e-04
147	RR4_SACHY (Q6L397) Chloroplast 30S ribosomal protein S4	43	5e-04
148	RR4_MAIZE (P02355) Chloroplast 30S ribosomal protein S4 (Basic p...	43	5e-04
149	RR4_LOPST (P59148) Chloroplast 30S ribosomal protein S4	43	5e-04
150	RR4_LOPCO (P59147) Chloroplast 30S ribosomal protein S4	43	5e-04
151	RR4_GOSHI (Q2L908) Chloroplast 30S ribosomal protein S4	43	5e-04
152	RR4_ACOCL (Q3V532) Chloroplast 30S ribosomal protein S4	43	5e-04
153	RS4_WOLSU (Q7M8F6) 30S ribosomal protein S4	43	5e-04
154	RR4_GLAPA (O20221) Chloroplast 30S ribosomal protein S4 (Fragment)	43	5e-04
155	RR4_WOOUN (P59152) Chloroplast 30S ribosomal protein S4	43	5e-04
156	RR4_WOORA (P59151) Chloroplast 30S ribosomal protein S4	43	5e-04
157	RR4_SPASP (O36054) Chloroplast 30S ribosomal protein S4 (Fragment)	43	5e-04
158	RR4_MICJU (P69647) Chloroplast 30S ribosomal protein S4 (Fragment)	43	5e-04
159	RR4_LAPNE (O20255) Chloroplast 30S ribosomal protein S4 (Fragment)	43	5e-04
160	RR4_GLACO (P69643) Chloroplast 30S ribosomal protein S4 (Fragment)	43	5e-04
161	RR4_FRESP (O20215) Chloroplast 30S ribosomal protein S4 (Fragment)	43	5e-04
162	RR4_CROSP (O20103) Chloroplast 30S ribosomal protein S4 (Fragment)	43	5e-04
163	RR4_CRONU (P69639) Chloroplast 30S ribosomal protein S4 (Fragment)	43	5e-04
164	RR4_BABST (O19995) Chloroplast 30S ribosomal protein S4 (Fragment)	43	5e-04
165	RR4_ARIPL (P69633) Chloroplast 30S ribosomal protein S4 (Fragment)	43	5e-04
166	RR4_ARICA (P69632) Chloroplast 30S ribosomal protein S4 (Fragment)	43	5e-04
167	RS4_LISMO (Q8Y6T6) 30S ribosomal protein S4	43	5e-04
168	RR4_TRIRO (P69654) Chloroplast 30S ribosomal protein S4 (Fragment)	43	5e-04
169	RR4_TRIDA (P69653) Chloroplast 30S ribosomal protein S4 (Fragment)	43	5e-04
170	RR4_SETVI (P69650) Chloroplast 30S ribosomal protein S4 (Fragment)	43	5e-04
171	RR4_PILTE (O20278) Chloroplast 30S ribosomal protein S4 (Fragment)	43	5e-04
172	RR4_PHYFL (P69649) Chloroplast 30S ribosomal protein S4 (Fragment)	43	5e-04
173	RR4_PENVI (P36467) Chloroplast 30S ribosomal protein S4 (Fragment)	43	5e-04
174	RR4_NAROD (O47029) Chloroplast 30S ribosomal protein S4 (Fragment)	43	5e-04
175	RR4_GLAMU (O20219) Chloroplast 30S ribosomal protein S4 (Fragment)	43	5e-04
176	RR4_ARUJA (P69634) Chloroplast 30S ribosomal protein S4 (Fragment)	43	5e-04
177	RR4_ANDIS (P69631) Chloroplast 30S ribosomal protein S4 (Fragment)	43	5e-04
178	RR4_TRISA (O20291) Chloroplast 30S ribosomal protein S4 (Fragment)	43	5e-04
179	RR4_FURGI (O20213) Chloroplast 30S ribosomal protein S4 (Fragment)	43	5e-04
180	RR4_BOBGL (O19992) Chloroplast 30S ribosomal protein S4 (Fragment)	43	5e-04
181	RR4_PINKO (Q85WX8) Chloroplast 30S ribosomal protein S4	42	7e-04
182	RS4_STAS1 (Q49YF2) 30S ribosomal protein S4	42	7e-04
183	RS4_STAAW (P66564) 30S ribosomal protein S4	42	7e-04
184	RS4_STAAS (Q6G8K8) 30S ribosomal protein S4	42	7e-04
185	RS4_STAAR (Q6GFY8) 30S ribosomal protein S4	42	7e-04
186	RS4_STAAN (P66563) 30S ribosomal protein S4	42	7e-04
187	RS4_STAAM (P66562) 30S ribosomal protein S4	42	7e-04
188	RS4_STAAC (Q5HF54) 30S ribosomal protein S4	42	7e-04
189	RS4_STAAB (Q2YTH0) 30S ribosomal protein S4	42	7e-04
190	RS4_GEOKA (Q5KW49) 30S ribosomal protein S4	42	7e-04
191	RR4_HYPLA (P59145) Chloroplast 30S ribosomal protein S4	42	7e-04
192	RR4_HYPDI (P59143) Chloroplast 30S ribosomal protein S4	42	7e-04
193	RR4_HYPCP (P59142) Chloroplast 30S ribosomal protein S4	42	7e-04
194	RR4_CYABU (P59138) Chloroplast 30S ribosomal protein S4	42	7e-04
195	RR4_BELCH (O19990) Chloroplast 30S ribosomal protein S4 (Fragment)	42	7e-04
196	RR4_EQUVA (Q6H9K2) Chloroplast 30S ribosomal protein S4	42	7e-04
197	RR4_EQULA (Q6H9L0) Chloroplast 30S ribosomal protein S4	42	7e-04
198	RR4_EQUHY (Q6H9L1) Chloroplast 30S ribosomal protein S4	42	7e-04
199	RR4_EQUGI (Q6H9L2) Chloroplast 30S ribosomal protein S4	42	7e-04
200	RS4_SYNY3 (P48939) 30S ribosomal protein S4	42	9e-04
201	RR4_RICNA (Q9M4C2) Chloroplast 30S ribosomal protein S4	42	9e-04
202	RR4_PLAAD (Q9FSE4) Chloroplast 30S ribosomal protein S4	42	9e-04
203	RR4_MARPO (P06358) Chloroplast 30S ribosomal protein S4	42	9e-04
204	RR4_EPIVI (P30056) Plastid 30S ribosomal protein S4	42	9e-04
205	RR4_PATFR (O20273) Chloroplast 30S ribosomal protein S4 (Fragment)	42	9e-04
206	RS4_LEIXX (Q6AFA4) 30S ribosomal protein S4	42	9e-04
207	RS4_PELLD (Q3B6D7) 30S ribosomal protein S4	42	9e-04
208	RS4_THET8 (P80373) 30S ribosomal protein S4	42	9e-04
209	RS4_THET2 (P62664) 30S ribosomal protein S4	42	9e-04
210	RS4_STRAW (Q827S7) 30S ribosomal protein S4	42	9e-04
211	RS4_BACST (P81288) 30S ribosomal protein S4 (BS5)	42	9e-04
212	RR4_PELNE (Q9FSD9) Chloroplast 30S ribosomal protein S4	42	9e-04
213	RS4_LEGPL (Q5WZI8) 30S ribosomal protein S4	42	9e-04
214	RS4_LEGPH (Q5ZYL9) 30S ribosomal protein S4	42	9e-04
215	RS4_LEGPA (Q5X835) 30S ribosomal protein S4	42	9e-04
216	RR4_PATSQ (O36052) Chloroplast 30S ribosomal protein S4 (Fragment)	42	9e-04
217	RR4_MORST (O20264) Chloroplast 30S ribosomal protein S4 (Fragment)	42	0.001
218	RS4_LACJO (Q74K05) 30S ribosomal protein S4	42	0.001
219	RS4_GEOSL (Q749B2) 30S ribosomal protein S4	42	0.001
220	RS4_GEOMG (Q39XY0) 30S ribosomal protein S4	42	0.001
221	RS4_ENTFA (Q82ZI6) 30S ribosomal protein S4	42	0.001
222	RS4_CORGL (Q8NSV4) 30S ribosomal protein S4	42	0.001
223	RS4_COREF (Q8FS34) 30S ribosomal protein S4	42	0.001
224	RS4_CORAM (Q3S664) 30S ribosomal protein S4	42	0.001
225	RR4_ZYGCR (Q32RL5) Chloroplast 30S ribosomal protein S4	42	0.001
226	RR4_NEPOL (Q9TKX5) Chloroplast 30S ribosomal protein S4	41	0.002
227	RR4_NECCR (P59149) Chloroplast 30S ribosomal protein S4	41	0.002
228	RR4_MONFO (Q9M4C1) Chloroplast 30S ribosomal protein S4	41	0.002
229	RR4_ANTPU (Q9FTC7) Chloroplast 30S ribosomal protein S4	41	0.002
230	RS4_NITWN (Q3ST14) 30S ribosomal protein S4	41	0.002
231	RR4_PANGI (Q68S04) Chloroplast 30S ribosomal protein S4	41	0.002
232	RR4_ARATH (P56799) Chloroplast 30S ribosomal protein S4	41	0.002
233	RR4_ADICA (Q85FL8) Chloroplast 30S ribosomal protein S4	41	0.002
234	RS4_LISMF (Q71Z71) 30S ribosomal protein S4	41	0.002
235	RS4_LISIN (Q92BB2) 30S ribosomal protein S4	41	0.002
236	RS4_BACSU (P21466) 30S ribosomal protein S4 (BS4)	41	0.002
237	RS4_BACLD (Q65G42) 30S ribosomal protein S4	41	0.002
238	RS4_THETN (Q8R7Y1) 30S ribosomal protein S4	41	0.002
239	RS4_TROWT (Q83GC9) 30S ribosomal protein S4	41	0.002
240	RS4_TROW8 (Q83HV1) 30S ribosomal protein S4	41	0.002
241	RS4_CORJK (Q4JTC1) 30S ribosomal protein S4	41	0.002
242	RR4_NYMAL (Q6EW46) Chloroplast 30S ribosomal protein S4	41	0.002
243	RR4_PSINU (Q95CA6) Chloroplast 30S ribosomal protein S4	41	0.002
244	RS4_STAHJ (Q4L760) 30S ribosomal protein S4	41	0.002
245	RS4_STAES (Q8CS54) 30S ribosomal protein S4	41	0.002
246	RS4_STAEQ (Q5HNI5) 30S ribosomal protein S4	41	0.002
247	RS4_IDILO (Q5QXV7) 30S ribosomal protein S4	41	0.002
248	RR4_FRUTA (Q9FSU1) Chloroplast 30S ribosomal protein S4	41	0.002
249	RR4_FRUDI (Q9FSV6) Chloroplast 30S ribosomal protein S4	41	0.002
250	RR4_ANTFO (Q85AX4) Chloroplast 30S ribosomal protein S4	41	0.002
251	RR4_EQUSC (Q6H9K5) Chloroplast 30S ribosomal protein S4	41	0.002
252	RS4_LACPL (Q88UX0) 30S ribosomal protein S4	40	0.003
253	RR4_PLARP (Q9M4C3) Chloroplast 30S ribosomal protein S4	40	0.003
254	RR4_FRUPO (Q9FSV5) Chloroplast 30S ribosomal protein S4	40	0.003
255	RR4_EQUSY (Q6H9K4) Chloroplast 30S ribosomal protein S4	40	0.003
256	RR4_EQUPT (Q6H9K7) Chloroplast 30S ribosomal protein S4	40	0.003
257	RR4_EQUPA (Q6H9K8) Chloroplast 30S ribosomal protein S4	40	0.003
258	RR4_EQUFL (Q6H9L3) Chloroplast 30S ribosomal protein S4	40	0.003
259	RR4_EQUAR (Q6H9L6) Chloroplast 30S ribosomal protein S4	40	0.003
260	RR4_MESVI (Q9MUN0) Chloroplast 30S ribosomal protein S4	40	0.003
261	RS4_CORDI (Q6NJ64) 30S ribosomal protein S4	40	0.003
262	RS4_AQUAE (O66484) 30S ribosomal protein S4	40	0.003
263	RS4_THIDA (Q3SLM5) 30S ribosomal protein S4	40	0.003
264	RR4_EQUBO (Q6H9L5) Chloroplast 30S ribosomal protein S4	40	0.003
265	RS4_LACSS (Q38XD6) 30S ribosomal protein S4	40	0.003
266	RS4_CHLTE (P59129) 30S ribosomal protein S4	40	0.003
267	RS4_PELUB (Q4FLJ0) 30S ribosomal protein S4	40	0.003
268	RS4_OCEIH (P59130) 30S ribosomal protein S4	40	0.003
269	RS4_BACHK (Q6HCM2) 30S ribosomal protein S4	40	0.003
270	RS4_BACCZ (Q633E0) 30S ribosomal protein S4	40	0.003
271	RS4_BACCR (Q817A4) 30S ribosomal protein S4	40	0.003
272	RS4_BACC1 (Q72Z76) 30S ribosomal protein S4	40	0.003
273	RS4_BACAN (Q81KT2) 30S ribosomal protein S4	40	0.003
274	RS4_NEIMB (P66561) 30S ribosomal protein S4	40	0.003
275	RS4_NEIMA (P66560) 30S ribosomal protein S4	40	0.003
276	RS4_NEIG1 (Q5F5V1) 30S ribosomal protein S4	40	0.003
277	RR4_ROMRE (O20280) Chloroplast 30S ribosomal protein S4 (Fragment)	40	0.003
278	RS4B_CLOAB (Q97J08) Putative 30S ribosomal protein S4 B	40	0.003
279	RS4_NOCFA (Q5Z1L0) 30S ribosomal protein S4	40	0.004
280	RR4_PSEAK (Q3ZJ39) Chloroplast 30S ribosomal protein S4	40	0.004
281	RR4_CYAPA (P48133) Cyanelle 30S ribosomal protein S4	40	0.004
282	RR4_CHAGL (Q8M9W2) Chloroplast 30S ribosomal protein S4	40	0.004
283	RS4_DESVH (Q72CF5) 30S ribosomal protein S4	40	0.004
284	RS4B_CLOPE (Q8XHW7) Putative 30S ribosomal protein S4 B	40	0.004
285	RS4_RHOPA (Q6N9G0) 30S ribosomal protein S4 (RRP-S4)	40	0.004
286	RS4_SYNEL (P59134) 30S ribosomal protein S4	40	0.004
287	RR4_JAMAU (Q9M4B8) Chloroplast 30S ribosomal protein S4	40	0.004
288	RR4_EMIHU (Q4G3A4) Chloroplast 30S ribosomal protein S4	39	0.006
289	RS4_CHLCH (Q3APJ9) 30S ribosomal protein S4	39	0.006
290	RR4_EUGGR (P27418) Chloroplast 30S ribosomal protein S4	39	0.006
291	RS4_MYCPU (Q98PK6) 30S ribosomal protein S4	39	0.006
292	RS4_COLP3 (Q488Y9) 30S ribosomal protein S4	39	0.006
293	RS4_MYCTU (O06325) 30S ribosomal protein S4	39	0.008
294	RS4_MYCLE (Q9X799) 30S ribosomal protein S4	39	0.008
295	RS4_MYCBO (P45811) 30S ribosomal protein S4	39	0.008
296	RR4_TAKLE (P59150) Chloroplast 30S ribosomal protein S4	39	0.008
297	RR4_HAPHO (Q9M4C0) Chloroplast 30S ribosomal protein S4	39	0.008
298	RR4_CYAME (O22020) Chloroplast 30S ribosomal protein S4	39	0.008
299	RS4_ANAVT (Q3M534) 30S ribosomal protein S4	39	0.010
300	RS4_ANASP (Q8YTI0) 30S ribosomal protein S4	39	0.010
301	RS4_LEPIN (Q9XD10) 30S ribosomal protein S4	39	0.010
302	RS4_LEPIC (Q72NI7) 30S ribosomal protein S4	39	0.010
303	RR4_PROWI (O47032) Plastid 30S ribosomal protein S4	39	0.010
304	RS4_NITOC (Q3J8T7) 30S ribosomal protein S4	39	0.010
305	RS4_BACSK (Q5WEB9) 30S ribosomal protein S4	39	0.010
306	RS4_PSEHT (Q3IJJ5) 30S ribosomal protein S4	39	0.010
307	RR4_ASTLO (P58134) Plastid 30S ribosomal protein S4	39	0.010
308	RR4_IRIEN (O20234) Chloroplast 30S ribosomal protein S4 (Fragment)	39	0.010
309	RS4_HELHP (Q7VGC0) 30S ribosomal protein S4	38	0.013
310	RR4_GUITH (P17072) Chloroplast 30S ribosomal protein S4	38	0.017
311	RS4_THICR (Q31IV9) 30S ribosomal protein S4	38	0.017
312	RS4_MANSM (Q65QX9) 30S ribosomal protein S4	38	0.017
313	RS4_PROAC (Q6A6R0) 30S ribosomal protein S4	37	0.029
314	RS4_MYCPA (Q73S44) 30S ribosomal protein S4	37	0.029
315	RS4_HAEIN (P44373) 30S ribosomal protein S4	37	0.029
316	RS4_HAEDU (Q7VKF7) 30S ribosomal protein S4	37	0.029
317	RS4_SILPO (Q5LNM2) 30S ribosomal protein S4	37	0.029
318	RS4_PASMU (Q9CL53) 30S ribosomal protein S4	37	0.029
319	RS4_HAEI8 (Q4QM98) 30S ribosomal protein S4	37	0.029
320	RS4_DEHSC (Q3ZZP7) 30S ribosomal protein S4	37	0.038
321	RS4_DEHE1 (Q3Z954) 30S ribosomal protein S4	37	0.038
322	RS4_STRT2 (Q5M255) 30S ribosomal protein S4	37	0.038
323	RS4_STRT1 (Q5LXK5) 30S ribosomal protein S4	37	0.038
324	RS4_NITMU (Q2YAX3) 30S ribosomal protein S4	37	0.038
325	RS4_BIFLO (P59127) 30S ribosomal protein S4	37	0.038
326	RS4_SHEON (P59131) 30S ribosomal protein S4	37	0.038
327	RS4_PSEF5 (Q4K556) 30S ribosomal protein S4	37	0.038
328	RS4_THIDN (Q30TS4) 30S ribosomal protein S4	36	0.049
329	RS4_BRAJA (Q89ID3) 30S ribosomal protein S4	36	0.049
330	RS4_STRMU (P59133) 30S ribosomal protein S4	36	0.064
331	RS4_LACLA (Q9CIS2) 30S ribosomal protein S4	36	0.064
332	RS4_DEIRA (Q9RSJ7) 30S ribosomal protein S4	36	0.064
333	RS4_WIGBR (Q8D1Y9) 30S ribosomal protein S4	36	0.064
334	RS4_COXBU (Q83EQ3) 30S ribosomal protein S4	36	0.064
335	RS4_CLOTE (Q890Q9) 30S ribosomal protein S4	36	0.064
336	RS4_CHRVO (Q7NQH6) 30S ribosomal protein S4	36	0.064
337	YS4L_PNECA (Q01688) Putative 40S ribosomal protein S4-like (Frag...	36	0.064
338	RS4_CAUCR (Q9A5D9) 30S ribosomal protein S4	35	0.084
339	RS4_HELPY (P56011) 30S ribosomal protein S4	35	0.084
340	RS4_HELPJ (Q9ZJT4) 30S ribosomal protein S4	35	0.084
341	RS4_PSEPF (Q3K611) 30S ribosomal protein S4	35	0.084
342	RS4_PSEAE (O52759) 30S ribosomal protein S4	35	0.084
343	RS4_MYCHJ (Q4A9B0) 30S ribosomal protein S4	35	0.11
344	RS4_MYCH7 (Q4A7F0) 30S ribosomal protein S4	35	0.11
345	RS4_MYCH2 (Q5ZZW4) 30S ribosomal protein S4	35	0.11
346	RS4_THEMA (Q9X1I3) 30S ribosomal protein S4	35	0.11
347	RS4_MESFL (Q6F0M9) 30S ribosomal protein S4	35	0.11
348	RS4_AZOSE (Q5P308) 30S ribosomal protein S4	35	0.11
349	RS4_MYCGA (Q7NAV0) 30S ribosomal protein S4	35	0.11
350	RS4_VIBPA (Q87SZ1) 30S ribosomal protein S4	35	0.11
351	RS4_MYCS5 (Q4A5T4) 30S ribosomal protein S4	35	0.11
352	RS4_GLUOX (Q5FQ27) 30S ribosomal protein S4	35	0.14
353	RS4_DESDG (Q30Z67) 30S ribosomal protein S4	35	0.14
354	RS4_BORGA (Q660Q7) 30S ribosomal protein S4	35	0.14
355	RS4_DECAR (Q47J78) 30S ribosomal protein S4	35	0.14
356	RS4_VIBVY (Q7MPG5) 30S ribosomal protein S4	35	0.14
357	RS4_VIBVU (Q8DE62) 30S ribosomal protein S4	35	0.14
358	RS4_VIBF1 (Q5E890) 30S ribosomal protein S4	35	0.14
359	RS4_VIBCH (Q9KP07) 30S ribosomal protein S4	35	0.14
360	RS4_STRR6 (P66566) 30S ribosomal protein S4	34	0.19
361	RS4_STRPN (P66565) 30S ribosomal protein S4	34	0.19
362	RS4_STRPM (Q48QN5) 30S ribosomal protein S4	34	0.19
363	RS4_STRP8 (P66569) 30S ribosomal protein S4	34	0.19
364	RS4_STRP6 (Q5X9C7) 30S ribosomal protein S4	34	0.19
365	RS4_STRP3 (P66568) 30S ribosomal protein S4	34	0.19
366	RS4_STRP1 (P66567) 30S ribosomal protein S4	34	0.19
367	RS4_STRA5 (Q8DWS6) 30S ribosomal protein S4	34	0.19
368	RS4_STRA3 (Q8E2M6) 30S ribosomal protein S4	34	0.19
369	RS4_STRA1 (Q3JYG8) 30S ribosomal protein S4	34	0.19
370	RS4_BORBU (O51560) 30S ribosomal protein S4	34	0.19
371	RS4_PSEU2 (Q4ZMR7) 30S ribosomal protein S4	34	0.19
372	RS4_PSESM (Q889U7) 30S ribosomal protein S4	34	0.19
373	RS4_PSE14 (Q48D60) 30S ribosomal protein S4	34	0.19
374	RS4_GLOVI (Q7NFF4) 30S ribosomal protein S4	34	0.19
375	RS4_BUCAP (P41186) 30S ribosomal protein S4	34	0.19
376	RS4_XYLFA (Q9PE53) 30S ribosomal protein S4	34	0.24
377	RS4_SHEVI (Q9S0Q9) 30S ribosomal protein S4	33	0.32
378	RS4_RHOS4 (Q3J446) 30S ribosomal protein S4	33	0.32
379	RS4_PSEPK (Q88QL2) 30S ribosomal protein S4	33	0.32
380	RR4B_CYACA (O22029) Chloroplast 30S ribosomal protein S4	33	0.42
381	RS4_PHOPR (Q6LV92) 30S ribosomal protein S4	33	0.54
382	RS4_ZYMMO (Q9Z5U7) 30S ribosomal protein S4	33	0.54
383	RS4_TREPA (O83328) 30S ribosomal protein S4	32	0.93
384	BUB1B_HUMAN (O60566) Mitotic checkpoint serine/threonine-protein...	32	1.2
385	RS4_RHOBA (Q7UXM6) 30S ribosomal protein S4	31	2.1
386	RS4_BUCBP (P59491) 30S ribosomal protein S4	31	2.1
387	CBLBA_XENLA (Q6GQL0) E3 ubiquitin-protein ligase CBL-B-A (EC 6.3...	30	4.6
388	RT04_MARPO (P26866) Mitochondrial ribosomal protein S4	29	6.0
389	SOX7_MOUSE (P40646) Transcription factor SOX-7 (mSOX7)	29	6.0
390	LMNA_CHICK (P13648) Lamin-A	29	6.0
391	MCSP_MOUSE (P15265) Sperm mitochondrial-associated cysteine-rich...	29	6.0
392	CBLBB_XENLA (Q6NRE7) E3 ubiquitin-protein ligase CBL-B-B (EC 6.3...	29	7.8
393	CHD4_HUMAN (Q14839) Chromodomain helicase-DNA-binding protein 4 ...	29	7.8

---

>RS9_PODAN (P52810) 40S ribosomal protein S9 (S7)|
          Length = 190

 Score =  219 bits (557), Expect = 4e-57
 Identities = 109/146 (74%), Positives = 129/146 (88%)
 Frame = +3

Query: 54  PRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRRIFEGA 233
           PRRP+E  RLD+ELKLVGEYGLR KRE+WRV   LS+IR AAR LLTLDEK+P+R+FEG 
Sbjct: 13  PRRPFEAARLDSELKLVGEYGLRNKREVWRVLLTLSKIRRAARELLTLDEKDPKRLFEGN 72

Query: 234 ALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHI 413
           AL+RR+ R G+L E + KLDYVLAL AE+FL RRLQTLV+K G+AKSIHHARVLIRQRHI
Sbjct: 73  ALIRRLVRVGVLDESRMKLDYVLALKAEDFLERRLQTLVYKLGLAKSIHHARVLIRQRHI 132

Query: 414 RVGRQIVNVPSFMVRVESEKHIDFSL 491
           RVG+QIVNVPSF+VR++S+KHIDF+L
Sbjct: 133 RVGKQIVNVPSFVVRLDSQKHIDFAL 158

---

>RS9_RAT (P29314) 40S ribosomal protein S9|
          Length = 193

 Score =  218 bits (556), Expect = 5e-57
 Identities = 106/146 (72%), Positives = 128/146 (87%)
 Frame = +3

Query: 54  PRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRRIFEGA 233
           PRRP+EK RLD ELKL+GEYGLR KRE+WRV++ L++IR AAR LLTLDEK+PRR+FEG 
Sbjct: 15  PRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGN 74

Query: 234 ALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHI 413
           ALLRR+ R G+L EG+ KLDY+L L  E+FL RRLQT VFK G+AKSIHHARVLIRQRHI
Sbjct: 75  ALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHI 134

Query: 414 RVGRQIVNVPSFMVRVESEKHIDFSL 491
           RV +Q+VN+PSF+VR++S+KHIDFSL
Sbjct: 135 RVRKQVVNIPSFIVRLDSQKHIDFSL 160

---

>RS9_MOUSE (Q6ZWN5) 40S ribosomal protein S9|
          Length = 193

 Score =  218 bits (556), Expect = 5e-57
 Identities = 106/146 (72%), Positives = 128/146 (87%)
 Frame = +3

Query: 54  PRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRRIFEGA 233
           PRRP+EK RLD ELKL+GEYGLR KRE+WRV++ L++IR AAR LLTLDEK+PRR+FEG 
Sbjct: 15  PRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGN 74

Query: 234 ALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHI 413
           ALLRR+ R G+L EG+ KLDY+L L  E+FL RRLQT VFK G+AKSIHHARVLIRQRHI
Sbjct: 75  ALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHI 134

Query: 414 RVGRQIVNVPSFMVRVESEKHIDFSL 491
           RV +Q+VN+PSF+VR++S+KHIDFSL
Sbjct: 135 RVRKQVVNIPSFIVRLDSQKHIDFSL 160

---

>RS9_HUMAN (P46781) 40S ribosomal protein S9|
          Length = 193

 Score =  218 bits (556), Expect = 5e-57
 Identities = 106/146 (72%), Positives = 128/146 (87%)
 Frame = +3

Query: 54  PRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRRIFEGA 233
           PRRP+EK RLD ELKL+GEYGLR KRE+WRV++ L++IR AAR LLTLDEK+PRR+FEG 
Sbjct: 15  PRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGN 74

Query: 234 ALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHI 413
           ALLRR+ R G+L EG+ KLDY+L L  E+FL RRLQT VFK G+AKSIHHARVLIRQRHI
Sbjct: 75  ALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHI 134

Query: 414 RVGRQIVNVPSFMVRVESEKHIDFSL 491
           RV +Q+VN+PSF+VR++S+KHIDFSL
Sbjct: 135 RVRKQVVNIPSFIVRLDSQKHIDFSL 160

---

>RS9_DROME (P55935) 40S ribosomal protein S9|
          Length = 195

 Score =  214 bits (546), Expect = 8e-56
 Identities = 105/146 (71%), Positives = 127/146 (86%)
 Frame = +3

Query: 54  PRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRRIFEGA 233
           PRRPYEK RLD ELK++GEYGLR KRE+WRV+YAL++IR AAR LLTLDEK+ +R+F+G 
Sbjct: 17  PRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARELLTLDEKDEKRLFQGN 76

Query: 234 ALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHI 413
           ALLRR+ R G+L E + KLDYVL L  E+FL RRLQT VFK G+AKSIHHARVLIRQRHI
Sbjct: 77  ALLRRLVRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHI 136

Query: 414 RVGRQIVNVPSFMVRVESEKHIDFSL 491
           RV +Q+VN+PSF+VR++S+KHIDFSL
Sbjct: 137 RVRKQVVNIPSFVVRLDSQKHIDFSL 162

---

>RS9_DICDI (P14132) 40S ribosomal protein S9 (40S ribosomal protein 1024)|
           (Vegetative-specific protein V12)
          Length = 185

 Score =  213 bits (541), Expect = 3e-55
 Identities = 100/145 (68%), Positives = 129/145 (88%)
 Frame = +3

Query: 45  SXKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRRIF 224
           S  PRRP+EKER+DAELK+VGE+GL+ K E+WRVQYAL++IR AAR LL LDEK+P+RIF
Sbjct: 9   SHTPRRPFEKERIDAELKVVGEFGLKNKNEVWRVQYALAKIRKAARELLVLDEKDPKRIF 68

Query: 225 EGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQ 404
           EG+ALLRR+++ G++ E ++KLDY+L L  ++F+ RRLQTLVFK G+AKSIHHARVLI+ 
Sbjct: 69  EGSALLRRLHKLGVMEESKNKLDYILNLKVQDFMERRLQTLVFKNGLAKSIHHARVLIKG 128

Query: 405 RHIRVGRQIVNVPSFMVRVESEKHI 479
           RHIRVG+Q+VNVPSF+VRVES+KH+
Sbjct: 129 RHIRVGKQLVNVPSFLVRVESQKHL 153

---

>RS9B_SCHPO (O59675) 40S ribosomal protein S9-B|
          Length = 191

 Score =  210 bits (534), Expect = 2e-54
 Identities = 104/146 (71%), Positives = 124/146 (84%)
 Frame = +3

Query: 54  PRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRRIFEGA 233
           PRRP+E  RLDAELKL GEYGLR K E+WRV   LS+IR AAR LLTLDEK+P+R+FEG 
Sbjct: 14  PRRPFESARLDAELKLAGEYGLRNKHEIWRVALTLSKIRRAARELLTLDEKDPKRLFEGN 73

Query: 234 ALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHI 413
           A++RR+ R G+L E + KLDYVLAL  E+FL RRLQT VFK G+AKSIHHARVLI QRHI
Sbjct: 74  AIIRRLVRLGILDESRMKLDYVLALRIEDFLERRLQTQVFKLGLAKSIHHARVLIFQRHI 133

Query: 414 RVGRQIVNVPSFMVRVESEKHIDFSL 491
           RVG+QIVNVPSF+VR++++KHIDF+L
Sbjct: 134 RVGKQIVNVPSFVVRLDAQKHIDFAL 159

---

>RS9A_SCHPO (Q09757) 40S ribosomal protein S9-A|
          Length = 190

 Score =  209 bits (532), Expect = 3e-54
 Identities = 104/146 (71%), Positives = 124/146 (84%)
 Frame = +3

Query: 54  PRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRRIFEGA 233
           PRRP+E  RLDAELKL GEYGLR K E+WRV   LS+IR AAR LLTLDEK+P+R+FEG 
Sbjct: 14  PRRPFESARLDAELKLAGEYGLRNKHEIWRVALTLSKIRRAARELLTLDEKDPKRLFEGN 73

Query: 234 ALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHI 413
           A++RR+ R G+L E + KLDYVLAL  E+FL RRLQT VFK G+AKSIHHARVLI QRHI
Sbjct: 74  AIIRRLVRLGILDETRMKLDYVLALRIEDFLERRLQTQVFKLGLAKSIHHARVLIFQRHI 133

Query: 414 RVGRQIVNVPSFMVRVESEKHIDFSL 491
           RVG+QIVNVPSF+VR++++KHIDF+L
Sbjct: 134 RVGKQIVNVPSFVVRLDTQKHIDFAL 159

---

>RS9B_YEAST (P05755) 40S ribosomal protein S9-B (S13) (YS11) (RP21) (YP28)|
          Length = 194

 Score =  206 bits (524), Expect = 3e-53
 Identities = 99/145 (68%), Positives = 124/145 (85%)
 Frame = +3

Query: 54  PRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRRIFEGA 233
           P+RPYE  RLDAELKL GE+GL+ KRE++R+ + LS+IR AAR LLT DEK+P+R+FEG 
Sbjct: 14  PKRPYESSRLDAELKLAGEFGLKNKREIYRISFQLSKIRRAARDLLTRDEKDPKRLFEGN 73

Query: 234 ALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHI 413
           AL+RR+ R G+L+E + KLDYVLAL  E+FL RRLQT V+K G+AKS+HHARVLI QRHI
Sbjct: 74  ALIRRLVRVGVLSEDKKKLDYVLALKVEDFLERRLQTQVYKLGLAKSVHHARVLITQRHI 133

Query: 414 RVGRQIVNVPSFMVRVESEKHIDFS 488
            VG+QIVN+PSFMVR++SEKHIDF+
Sbjct: 134 AVGKQIVNIPSFMVRLDSEKHIDFA 158

---

>RS9_CAEEL (Q20228) 40S ribosomal protein S9|
          Length = 189

 Score =  205 bits (522), Expect = 5e-53
 Identities = 98/146 (67%), Positives = 126/146 (86%)
 Frame = +3

Query: 54  PRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRRIFEGA 233
           PRRP+EKERLD ELKL+G +GL+ KRE+WRV+Y L+++R AAR LLTL++K+P+R+FEG 
Sbjct: 15  PRRPFEKERLDQELKLIGTFGLKNKREVWRVKYTLAKVRKAARELLTLEDKDPKRLFEGN 74

Query: 234 ALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHI 413
           ALLRR+ + G+L E + KLDYVL L  E+FL RRLQT VFK G+AKSIHHAR+LI+Q HI
Sbjct: 75  ALLRRLVKIGVLDETKMKLDYVLGLKVEDFLERRLQTQVFKLGLAKSIHHARILIKQHHI 134

Query: 414 RVGRQIVNVPSFMVRVESEKHIDFSL 491
           RV RQ+V+VPSF+VR++S+KHIDFSL
Sbjct: 135 RVRRQVVDVPSFIVRLDSQKHIDFSL 160

---

>RS9A_YEAST (O13516) 40S ribosomal protein S9-A (S13) (YS11) (RP21) (YP28)|
          Length = 196

 Score =  205 bits (521), Expect = 6e-53
 Identities = 98/145 (67%), Positives = 124/145 (85%)
 Frame = +3

Query: 54  PRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRRIFEGA 233
           P+RPYE  RLDAELKL GE+GL+ K+E++R+ + LS+IR AAR LLT DEK+P+R+FEG 
Sbjct: 14  PKRPYESSRLDAELKLAGEFGLKNKKEIYRISFQLSKIRRAARDLLTRDEKDPKRLFEGN 73

Query: 234 ALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHI 413
           AL+RR+ R G+L+E + KLDYVLAL  E+FL RRLQT V+K G+AKS+HHARVLI QRHI
Sbjct: 74  ALIRRLVRVGVLSEDKKKLDYVLALKVEDFLERRLQTQVYKLGLAKSVHHARVLITQRHI 133

Query: 414 RVGRQIVNVPSFMVRVESEKHIDFS 488
            VG+QIVN+PSFMVR++SEKHIDF+
Sbjct: 134 AVGKQIVNIPSFMVRLDSEKHIDFA 158

---

>RS9_TRYBB (P17959) Probable 40S ribosomal protein S9|
          Length = 190

 Score =  197 bits (502), Expect = 1e-50
 Identities = 94/145 (64%), Positives = 118/145 (81%)
 Frame = +3

Query: 54  PRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRRIFEGA 233
           PRRP+EKERLD E+KL G+YGLRCKRE+WRV   LS++R  AR LLTL E +PRR+ EG+
Sbjct: 14  PRRPFEKERLDREMKLCGQYGLRCKREIWRVNMTLSKMRRTARLLLTLPENHPRRLLEGS 73

Query: 234 ALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHI 413
           A++RR + YG L E +DKLDYVL+LT  + L RRLQT+VFK G+AKS+HH+RVLI+QRHI
Sbjct: 74  AIMRRCHGYGFLDEDKDKLDYVLSLTVPDILERRLQTVVFKHGLAKSVHHSRVLIQQRHI 133

Query: 414 RVGRQIVNVPSFMVRVESEKHIDFS 488
            V +QIV +PSF+VRV SE HI F+
Sbjct: 134 AVAKQIVTIPSFIVRVSSEHHIAFA 158

---

>RS9_NAEFO (Q25555) 40S ribosomal protein S9|
          Length = 186

 Score =  196 bits (497), Expect = 4e-50
 Identities = 97/148 (65%), Positives = 120/148 (81%)
 Frame = +3

Query: 45  SXKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRRIF 224
           S  PRRP+EKER+D ELK+ G+YGL+ K+E+WR+QY L+R R  ARHLLTL E + +R F
Sbjct: 14  SLPPRRPFEKERMDRELKMCGKYGLKNKQEIWRLQYYLARARKTARHLLTLPEDDMKRQF 73

Query: 225 EGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQ 404
           EGAALLRRM R GLL E + +LDY+L+L  E+ L RRLQT+V K G++KSIHHAR LI Q
Sbjct: 74  EGAALLRRMTRLGLLDESKQQLDYILSLKTEDLLERRLQTVVQKLGLSKSIHHARQLIFQ 133

Query: 405 RHIRVGRQIVNVPSFMVRVESEKHIDFS 488
           RHIRVG+Q VNVPSF+VRV+SEKHI+ S
Sbjct: 134 RHIRVGKQTVNVPSFIVRVDSEKHINMS 161

---

>RS9_PIG (Q29197) 40S ribosomal protein S9 (Fragment)|
          Length = 130

 Score =  168 bits (426), Expect = 6e-42
 Identities = 83/117 (70%), Positives = 98/117 (83%)
 Frame = +3

Query: 54  PRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRRIFEGA 233
           PRRP+EK RLD ELKL+GEYGLR KRE+WRV++ L++IR AAR LLTLDEK+PRR+FEG 
Sbjct: 14  PRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGN 73

Query: 234 ALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQ 404
           ALLRR+ R G+L EG+ KLDY+L L  E+FL RRLQT VFK G+A SIHH RVLIRQ
Sbjct: 74  ALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAXSIHHXRVLIRQ 130

---

>RS9_ENTHI (O15612) 40S ribosomal protein S9 (Fragment)|
          Length = 144

 Score =  157 bits (396), Expect = 2e-38
 Identities = 76/134 (56%), Positives = 102/134 (76%)
 Frame = +3

Query: 54  PRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRRIFEGA 233
           P+ PYE+ER DAELKLVG++GL+ K+E+ RV Y L  +R  A+ +L  D K+P+R+ EGA
Sbjct: 11  PKVPYERERFDAELKLVGQFGLKNKKEIQRVHYMLGHMRTIAKVMLMKDAKDPKRLLEGA 70

Query: 234 ALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHI 413
           ALLRR++  G+L   Q+KL++VLAL  EN L RRLQTLV++ G  KSIHHARVLIR + I
Sbjct: 71  ALLRRLHNLGILPRDQNKLEFVLALKEENLLERRLQTLVYRKGFGKSIHHARVLIRGKMI 130

Query: 414 RVGRQIVNVPSFMV 455
           + G+Q+  VPSF+V
Sbjct: 131 KAGKQVGGVPSFLV 144

---

>RS4_METKA (Q8TVC0) 30S ribosomal protein S4P|
          Length = 186

 Score =  116 bits (291), Expect = 3e-26
 Identities = 65/147 (44%), Positives = 95/147 (64%), Gaps = 2/147 (1%)
 Frame = +3

Query: 54  PRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRRIFEGA 233
           PR P+E ERL+ E KL+ +YGLR K+ELWR Q  L R R  A+ L+   +   +R  E  
Sbjct: 14  PRHPWEAERLEYERKLMRKYGLRRKKELWRHQTQLKRWRERAKELMARTDPEAQR--ERE 71

Query: 234 ALLRRMNRYGLLAEGQDK--LDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQR 407
           AL R++   G+L +  ++  LD +L LT E+ L RRLQT+V++ G+AK+   AR L+  R
Sbjct: 72  ALFRKLYDLGILDKKPEEATLDDILRLTVEDVLERRLQTIVYRKGLAKTPLQARQLVVHR 131

Query: 408 HIRVGRQIVNVPSFMVRVESEKHIDFS 488
           HI +G +IV VPS++V  E E+ +D+S
Sbjct: 132 HIAIGDRIVTVPSYLVSREEEEEVDYS 158

---

>RS4_THEAC (Q9HJD7) 30S ribosomal protein S4P|
          Length = 199

 Score =  112 bits (281), Expect = 4e-25
 Identities = 66/147 (44%), Positives = 93/147 (63%), Gaps = 3/147 (2%)
 Frame = +3

Query: 54  PRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHL---LTLDEKNPRRIF 224
           PR P+EKER+D E K+V +YGL+ K+E+WR +  LS IR+ AR L   L  ++ N ++  
Sbjct: 14  PRHPWEKERIDEENKIVVKYGLKNKKEIWRSEALLSSIRSQARDLRARLRTNDVNAQKQL 73

Query: 225 EGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQ 404
           E   +++R+NRY LL+E    LD VL+LT EN L RRLQT+VF+  +A S+  AR LI  
Sbjct: 74  E--RMIKRLNRYKLLSENAT-LDDVLSLTVENILDRRLQTIVFRKNLAISVRQARQLITH 130

Query: 405 RHIRVGRQIVNVPSFMVRVESEKHIDF 485
            HI V  + V VP  +V  + E  I +
Sbjct: 131 GHISVAGRRVTVPGMLVEAKDEDTIAY 157

---

>RS4_METJA (P54020) 30S ribosomal protein S4P|
          Length = 187

 Score =  108 bits (271), Expect = 6e-24
 Identities = 59/145 (40%), Positives = 87/145 (60%)
 Frame = +3

Query: 54  PRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRRIFEGA 233
           P  P+ KER++ E +L  +YGLR KRE+W+ +  L + R  AR L++  ++  +   E  
Sbjct: 15  PNHPWIKERIEREKELCRKYGLRRKREVWKAETILRKYRRQARRLIS--DRTEQGAKEAV 72

Query: 234 ALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHI 413
            L   + +YG+L      LD VL+LT E+ L RRLQTLVF+ G+A++   AR LI   HI
Sbjct: 73  QLFNVLKKYGILKIENPTLDDVLSLTVEDILERRLQTLVFRKGLARTPRQARQLIVHGHI 132

Query: 414 RVGRQIVNVPSFMVRVESEKHIDFS 488
            V  ++V  PS+MV VE E  I ++
Sbjct: 133 AVNGRVVTAPSYMVTVEEEDKISYA 157

---

>RS4_PICTO (Q6KZP7) 30S ribosomal protein S4P|
          Length = 183

 Score =  107 bits (267), Expect = 2e-23
 Identities = 62/146 (42%), Positives = 89/146 (60%), Gaps = 1/146 (0%)
 Frame = +3

Query: 54  PRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLT-LDEKNPRRIFEG 230
           PR P+EK+R+DAE +L+ +YGL+ KRELWR Q  L+  R  AR L   L   +P  I + 
Sbjct: 14  PRHPWEKDRIDAERQLLIKYGLKNKRELWRAQTILTNFRTQARTLQAKLRYNDPLAIKQF 73

Query: 231 AALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRH 410
             L+ +++R  LL E    LD VL+L  E+ L RRL+TLV+K  +A ++  AR  I   H
Sbjct: 74  QLLIGKLSRLNLLGENAT-LDDVLSLNIEDILERRLETLVYKKNLALTMKQARQFITHGH 132

Query: 411 IRVGRQIVNVPSFMVRVESEKHIDFS 488
           I+V  ++V +PSFMV    E  I ++
Sbjct: 133 IKVNDRVVTIPSFMVEKSMEDSITYN 158

---

>RS4_THEVO (Q97B95) 30S ribosomal protein S4P|
          Length = 200

 Score =  107 bits (267), Expect = 2e-23
 Identities = 63/147 (42%), Positives = 93/147 (63%), Gaps = 3/147 (2%)
 Frame = +3

Query: 54  PRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHL---LTLDEKNPRRIF 224
           PR P+EK+R+D E K++ +YGL+ KRE+WR +  LS IR+ AR+L   L   + N ++  
Sbjct: 14  PRHPWEKDRIDEENKILVKYGLKNKREIWRSEAMLSSIRSQARYLRARLRASDANAQKQL 73

Query: 225 EGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQ 404
           E   +++R++RY +L++ +  LD VL+LT EN L RRLQT+VFK  +A S   AR LI  
Sbjct: 74  E--RMIKRLSRYKILSD-KATLDDVLSLTVENILDRRLQTIVFKKNLALSEKQARQLITH 130

Query: 405 RHIRVGRQIVNVPSFMVRVESEKHIDF 485
            HI V  + V VP  +V  + E  I +
Sbjct: 131 GHITVNGRRVTVPGMLVEAQYEDTIAY 157

---

>RS4_AERPE (Q9YB58) 30S ribosomal protein S4P|
          Length = 171

 Score =  107 bits (266), Expect = 2e-23
 Identities = 59/145 (40%), Positives = 86/145 (59%)
 Frame = +3

Query: 54  PRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRRIFEGA 233
           P+ P+ KERL+ E +L+G YGLR K+ELW+ +    R R+ AR LL L  +  R      
Sbjct: 14  PKHPWIKERLERERELMGRYGLRNKKELWKAETLARRFRHRARSLLGLPPEVRREA--SR 71

Query: 234 ALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHI 413
            L+  + R GL+      +D VL + AE  L RRLQT+V+K G+AK+I+ AR L+   HI
Sbjct: 72  VLVESLYRMGLIDNPNVDIDEVLGINAEKVLERRLQTIVYKKGLAKTIYQARQLVVHGHI 131

Query: 414 RVGRQIVNVPSFMVRVESEKHIDFS 488
            +  + V  P ++V  E EK ID++
Sbjct: 132 AIAGRRVTSPGYLVSREEEKLIDYA 156

---

>RS4_PYRHO (O59306) 30S ribosomal protein S4P|
          Length = 180

 Score =  103 bits (258), Expect = 2e-22
 Identities = 63/145 (43%), Positives = 84/145 (57%)
 Frame = +3

Query: 54  PRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRRIFEGA 233
           P  P+ KERLD E  L+ +Y L+ K+ELW+ +  L   R  AR LL    K      E  
Sbjct: 14  PPHPWIKERLDRERVLMDKYELKNKKELWKHETQLKNFRRRARRLLAARGKQAE--IERE 71

Query: 234 ALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHI 413
            LL R+ R GLL E    LD VL+LT E+ L RRLQT+V+K G+A+++  AR LI   HI
Sbjct: 72  QLLSRLKRLGLLPEDA-VLDDVLSLTVEDILERRLQTIVYKKGLARTMRQARQLIVHGHI 130

Query: 414 RVGRQIVNVPSFMVRVESEKHIDFS 488
            V  QI+  PS++V  E E  I ++
Sbjct: 131 EVNGQIIRSPSYLVLKEEEDKITYA 155

---

>RS4_PYRFU (P61993) 30S ribosomal protein S4P|
          Length = 180

 Score =  103 bits (256), Expect = 3e-22
 Identities = 63/145 (43%), Positives = 84/145 (57%)
 Frame = +3

Query: 54  PRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRRIFEGA 233
           P  P+ KERLD E  L+ +Y L+ K+ELW+ +  L   R  AR LL    K      E  
Sbjct: 14  PPHPWIKERLDRERVLMDKYELKNKKELWKHETQLKNFRRRARRLLAARGKQAE--IERE 71

Query: 234 ALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHI 413
            LL R+ R GLL E    LD VL+LT E+ L RRLQT+V+K G+A+++  AR LI   HI
Sbjct: 72  QLLARLKRLGLLPEDA-VLDDVLSLTIEDILERRLQTIVYKKGLARTMRQARQLIVHGHI 130

Query: 414 RVGRQIVNVPSFMVRVESEKHIDFS 488
            V  QI+  PS++V  E E  I ++
Sbjct: 131 EVNGQIIRSPSYLVLKEEEDTITYA 155

---

>RS4_PYRAB (P61992) 30S ribosomal protein S4P|
          Length = 180

 Score =  103 bits (256), Expect = 3e-22
 Identities = 63/145 (43%), Positives = 84/145 (57%)
 Frame = +3

Query: 54  PRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRRIFEGA 233
           P  P+ KERLD E  L+ +Y L+ K+ELW+ +  L   R  AR LL    K      E  
Sbjct: 14  PPHPWIKERLDRERVLMDKYELKNKKELWKHETQLKNFRRRARRLLAARGKQAE--IERE 71

Query: 234 ALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHI 413
            LL R+ R GLL E    LD VL+LT E+ L RRLQT+V+K G+A+++  AR LI   HI
Sbjct: 72  QLLARLKRLGLLPEDA-VLDDVLSLTIEDILERRLQTIVYKKGLARTMRQARQLIVHGHI 130

Query: 414 RVGRQIVNVPSFMVRVESEKHIDFS 488
            V  QI+  PS++V  E E  I ++
Sbjct: 131 EVNGQIIRSPSYLVLKEEEDTITYA 155

---

>RS4_ARCFU (O28000) 30S ribosomal protein S4P|
          Length = 172

 Score =  102 bits (255), Expect = 4e-22
 Identities = 60/148 (40%), Positives = 88/148 (59%), Gaps = 4/148 (2%)
 Frame = +3

Query: 54  PRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTL----DEKNPRRI 221
           P  P++K RL+ E++LV +YGLR KRELWR Q  L + R  AR LL       ++     
Sbjct: 14  PTHPWDKARLEKEMQLVIKYGLRNKRELWRFQNILRKYRRVARDLLAEIGLPGKEGEIAK 73

Query: 222 FEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIR 401
            +   +++++N+ G+L E    LD +L L+ E+FL RRLQT+V++ G+A++I  AR  I 
Sbjct: 74  AKAQTVIKKLNKMGILPENAT-LDDILNLSVEDFLERRLQTMVYRQGLARTIKQARQFIT 132

Query: 402 QRHIRVGRQIVNVPSFMVRVESEKHIDF 485
             HI V  + V  PSF+V  E E  I F
Sbjct: 133 HGHIAVDGRRVTSPSFIVTKELESKISF 160

---

>RS4_SULTO (Q96YV8) 30S ribosomal protein S4P|
          Length = 177

 Score =  102 bits (253), Expect = 7e-22
 Identities = 57/144 (39%), Positives = 84/144 (58%)
 Frame = +3

Query: 54  PRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRRIFEGA 233
           P  P+ +  L+ E  L+G+YGLR KRELW  Q  + + R+ AR LL L      R     
Sbjct: 14  PGHPWIRINLEKEQVLIGKYGLRNKRELWLAQTIIRKFRHQARSLLALPPAE--RSTREK 71

Query: 234 ALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHI 413
            L++++ R G++ +    LD +L L  EN+L RRLQT+V+K G+A++I+ AR LI   HI
Sbjct: 72  QLIQKLYRMGIIEKDNATLDDILGLNEENYLERRLQTIVYKKGLARTIYQARQLIVHGHI 131

Query: 414 RVGRQIVNVPSFMVRVESEKHIDF 485
            +G + V  P ++V    E  IDF
Sbjct: 132 AIGGRRVTSPGYIVMRGEEDLIDF 155

---

>RS4_SULSO (P95987) 30S ribosomal protein S4P|
          Length = 181

 Score =  101 bits (251), Expect = 1e-21
 Identities = 56/144 (38%), Positives = 86/144 (59%)
 Frame = +3

Query: 54  PRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRRIFEGA 233
           P  P+ KER+  E +L+G+YGLR KRE+W  Q  + + R+ AR LL L      R     
Sbjct: 14  PGHPWIKERIGYEQELLGKYGLRNKREIWIAQSIIRKFRHQARSLLALPPAE--RAVREK 71

Query: 234 ALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHI 413
            L+ ++ + GLL +    +D +L+LT ++ L RRLQT+V+K G++ +I+ AR LI   HI
Sbjct: 72  QLVGKLLKMGLLKKETATVDDILSLTEQDLLERRLQTIVYKKGLSNTIYQARQLITHGHI 131

Query: 414 RVGRQIVNVPSFMVRVESEKHIDF 485
            V  + V  P ++V V+ E  ID+
Sbjct: 132 AVNGKRVTSPGYIVNVDEENLIDY 155

---

>RS4_SULAC (P39467) 30S ribosomal protein S4P|
          Length = 176

 Score =  100 bits (250), Expect = 2e-21
 Identities = 58/146 (39%), Positives = 86/146 (58%), Gaps = 2/146 (1%)
 Frame = +3

Query: 54  PRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLD--EKNPRRIFE 227
           P  P+ K  L  E  L+G+YGLR K+E+W  Q  +   R+ AR LL L   E+N R    
Sbjct: 14  PSHPWIKINLGKEQILIGKYGLRNKKEIWIAQTMIRNFRHQARSLLALPPAERNIRE--- 70

Query: 228 GAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQR 407
              L++++ R G+L +    LD +L+LT EN+L RRLQT+V+K G+A++I+ AR LI   
Sbjct: 71  -KQLIQKLYRMGILEKDNSTLDDILSLTEENYLERRLQTIVYKKGLARTIYQARQLITHG 129

Query: 408 HIRVGRQIVNVPSFMVRVESEKHIDF 485
           HI +  + V  P ++V    E  ID+
Sbjct: 130 HIAISGRKVTSPGYVVLRGEEDLIDY 155

---

>RS4_METBF (Q46GC8) 30S ribosomal protein S4P|
          Length = 216

 Score = 98.2 bits (243), Expect = 1e-20
 Identities = 55/150 (36%), Positives = 83/150 (55%), Gaps = 6/150 (4%)
 Frame = +3

Query: 54  PRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRRIFEG- 230
           PR P+++ R+ +E++LV  YGLR KRE+W+    L   R+ AR LL     +  R  EG 
Sbjct: 14  PRHPWQEARMASEVQLVKAYGLRNKREVWKAASTLRMYRSEARRLLASAANSQERGLEGH 73

Query: 231 -----AALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVL 395
                  +L ++ RYG++    D +D +L+L  EN L RRLQT V + G+A+++  AR  
Sbjct: 74  QKTQSEEILAKLIRYGIIKSDAD-IDDILSLKTENILERRLQTQVLRLGLARTVVQARQF 132

Query: 396 IRQRHIRVGRQIVNVPSFMVRVESEKHIDF 485
           I   HI +  +   VP  +V  E E HI +
Sbjct: 133 ITHGHIAINGRKATVPGMLVSKEDEMHIGY 162

---

>RS4_PYRKO (Q5JJF2) 30S ribosomal protein S4P|
          Length = 180

 Score = 97.8 bits (242), Expect = 1e-20
 Identities = 60/145 (41%), Positives = 81/145 (55%)
 Frame = +3

Query: 54  PRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRRIFEGA 233
           P  P+ KERLD E  L   Y L+ K+ELWR +  L   R  AR LL    K      E  
Sbjct: 14  PSHPWIKERLDRERVLKRNYALKNKKELWRHETQLKEFRRRARRLLAARGKQAE--IERQ 71

Query: 234 ALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHI 413
            LL+R+ R GLL      LD VL+LT E+ L RRLQT+V++ G+A+++  AR LI   HI
Sbjct: 72  QLLQRLYRLGLLP-ADAVLDDVLSLTVEDVLERRLQTIVYRKGLARTMKQARQLIVHGHI 130

Query: 414 RVGRQIVNVPSFMVRVESEKHIDFS 488
            V  Q++  P ++V  E E  I ++
Sbjct: 131 EVNGQVIRSPGYLVLREEEDTITYA 155

---

>RS4_PYRAE (Q8ZTV1) 30S ribosomal protein S4P|
          Length = 159

 Score = 97.4 bits (241), Expect = 2e-20
 Identities = 58/145 (40%), Positives = 84/145 (57%), Gaps = 2/145 (1%)
 Frame = +3

Query: 51  KPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLL--TLDEKNPRRIF 224
           KP++ + K+ L  EL+L+GEYGLR K+ELW  +  L  I   AR LL  T +E+ P  + 
Sbjct: 15  KPKKIWNKQLLLEELQLMGEYGLRNKKELWLARARLKWITRRARSLLSMTAEERAPLEM- 73

Query: 225 EGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQ 404
                  ++ + G + +   +LD +L+L     L RRLQT+V++ G+AKSIHHAR LI  
Sbjct: 74  ---PFKEKLYKMGFIEDPNVQLDRILSLDVRAILERRLQTIVYRMGLAKSIHHARQLIVH 130

Query: 405 RHIRVGRQIVNVPSFMVRVESEKHI 479
            H+ V  + V  P F+V  E E  I
Sbjct: 131 GHVAVAGRRVTSPGFLVPRELEDKI 155

---

>RS4_NANEQ (Q74NF7) 30S ribosomal protein S4P|
          Length = 180

 Score = 94.7 bits (234), Expect = 1e-19
 Identities = 54/144 (37%), Positives = 84/144 (58%)
 Frame = +3

Query: 54  PRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRRIFEGA 233
           P  P++K+RL  E +L+ EYGL+ KRELW  +    + R  AR+L            E  
Sbjct: 11  PSHPWQKQRLIIEKRLMKEYGLKNKRELWIAETIARKWRAYARYLNAKQAAGQDISEEKE 70

Query: 234 ALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHI 413
             L ++ + G+L+E  + LD VL LT ++ L RRLQT++ + G+AK++  AR  I   HI
Sbjct: 71  RFLTKLKKLGVLSENAE-LDDVLDLTVKDVLERRLQTMLVRKGLAKTMKQARQFIVHGHI 129

Query: 414 RVGRQIVNVPSFMVRVESEKHIDF 485
            V  ++V+ PS++V+ E E  I+F
Sbjct: 130 MVNGEVVDAPSYLVKKEEEDKIEF 153

---

>RS4_METTH (O26142) 30S ribosomal protein S4P|
          Length = 171

 Score = 93.6 bits (231), Expect = 3e-19
 Identities = 54/144 (37%), Positives = 86/144 (59%)
 Frame = +3

Query: 54  PRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRRIFEGA 233
           P  P+  ER+  E +LV +YGL+ K+E+W+ +  + R R  AR+LL +  ++  +  E  
Sbjct: 14  PPHPWNAERIKEENRLVAKYGLKNKKEVWKAETMVRRYRRDARYLLGMASEHTGK--ERE 71

Query: 234 ALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHI 413
            LL  + R G+L EG  KL+ VL LT E+ L RRLQTLV K G+A+++  AR ++   HI
Sbjct: 72  QLLGHLVRTGILNEGA-KLEDVLDLTVEDVLRRRLQTLVHKRGLARTVKEARQMVIHGHI 130

Query: 414 RVGRQIVNVPSFMVRVESEKHIDF 485
            +  + ++ P ++V+   E  I F
Sbjct: 131 ALDGRKIDAPGYIVKRGEEDKIGF 154

---

>RS4_METMA (Q8PV18) 30S ribosomal protein S4P|
          Length = 219

 Score = 90.1 bits (222), Expect = 3e-18
 Identities = 51/151 (33%), Positives = 81/151 (53%), Gaps = 7/151 (4%)
 Frame = +3

Query: 54  PRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTL-------DEKNP 212
           PR P+++ R+ AE++LV  YGLR K+E+W+    L   R+ AR LL          E   
Sbjct: 14  PRHPWQEARMAAEVQLVKAYGLRNKKEVWKAASMLRMYRSEARKLLAQVASGGQEGELEG 73

Query: 213 RRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARV 392
               +   +L ++ RYG++ +    +D +L+L  EN L RRLQT V + G+A+++  AR 
Sbjct: 74  HYATQSEEILSKLIRYGII-KADANVDDILSLKTENILERRLQTQVLRLGLARTVIQARQ 132

Query: 393 LIRQRHIRVGRQIVNVPSFMVRVESEKHIDF 485
            I   HI +  +   +P  +V  E E HI +
Sbjct: 133 FITHGHIAINGRKATIPGMLVSKEDEMHIGY 163

---

>RS4_HALSA (Q9HQJ6) 30S ribosomal protein S4P|
          Length = 170

 Score = 90.1 bits (222), Expect = 3e-18
 Identities = 53/144 (36%), Positives = 76/144 (52%)
 Frame = +3

Query: 54  PRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRRIFEGA 233
           P  PY+ ER+  E  L+  YGL+ K ELWR Q  L   R  AR LL            G 
Sbjct: 14  PNHPYQGERIAEESDLLSRYGLKNKEELWRAQSELRDYRREARRLL-----GQTGTVSGE 68

Query: 234 ALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHI 413
             + R+ R G+L+E +++LD VL+L   + L RRLQT+V++ G+A ++  AR  +   H+
Sbjct: 69  EFVARLQRIGILSE-EERLDDVLSLEVTDVLERRLQTVVYREGLANTMGQARQFVSHGHV 127

Query: 414 RVGRQIVNVPSFMVRVESEKHIDF 485
            V    V  PS+ V V  E  + F
Sbjct: 128 TVDGSRVTEPSYTVPVSEENTLAF 151

---

>RS4_METMP (Q6LXN0) 30S ribosomal protein S4P|
          Length = 178

 Score = 89.7 bits (221), Expect = 4e-18
 Identities = 50/144 (34%), Positives = 80/144 (55%)
 Frame = +3

Query: 54  PRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRRIFEGA 233
           P  P+  ER+  E ++  +YGL  K+ELW+++  L   R  AR L++  +   +   E  
Sbjct: 14  PNHPWIGERIQKEKEISQKYGLVNKKELWKMETQLRNYRRQARKLIS--DTTTQGGKEAV 71

Query: 234 ALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHI 413
            L   + RY +L E +  LD+VL+L  E+ L RRLQT+VF+ G+AK+   AR  I   HI
Sbjct: 72  QLFNVLKRYAILIEEEPTLDHVLSLNIESILERRLQTIVFRKGLAKTPKQARQFIVHGHI 131

Query: 414 RVGRQIVNVPSFMVRVESEKHIDF 485
            V  + V  P++++ V     I++
Sbjct: 132 AVNGKRVTAPAYLISVAENDAIEY 155

---

>RS4_METAC (Q8TRR1) 30S ribosomal protein S4P|
          Length = 218

 Score = 89.0 bits (219), Expect = 6e-18
 Identities = 50/150 (33%), Positives = 80/150 (53%), Gaps = 6/150 (4%)
 Frame = +3

Query: 54  PRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRRIFEG- 230
           P+ P+++ R+  E++LV  YGLR K+E+W+    L   R+ AR LL           EG 
Sbjct: 14  PKHPWQEARMATEVQLVKAYGLRNKKEVWKAASMLRMYRSEARKLLAHVASGQEGGLEGH 73

Query: 231 -----AALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVL 395
                  +L ++ RYG++ +    +D +L+L  EN L RRLQT V + G+A+++  AR  
Sbjct: 74  YRTQSEEILSKLIRYGII-KSDANIDDILSLKTENILERRLQTQVLRLGLARTVIQARQF 132

Query: 396 IRQRHIRVGRQIVNVPSFMVRVESEKHIDF 485
           I   HI +  +   +P  +V  E E HI +
Sbjct: 133 ITHGHIAINGRKATIPGMLVSKEDEMHIGY 162

---

>RS4_HALMA (Q00862) 30S ribosomal protein S4P (HmaS4)|
          Length = 171

 Score = 88.6 bits (218), Expect = 8e-18
 Identities = 56/144 (38%), Positives = 74/144 (51%)
 Frame = +3

Query: 54  PRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRRIFEGA 233
           P  P++ ER+  E  L+G YGL+ K ELWR Q  L   R  AR LL    ++     E  
Sbjct: 13  PNHPFQGERIADEANLIGRYGLKNKEELWRAQSELRGYRREARKLLGSAGEHET---ESE 69

Query: 234 ALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHI 413
             L R+ RYG+L E QD+LD VL+L   + L RRLQT+V++ G A +   AR  I   HI
Sbjct: 70  EFLARLKRYGILNE-QDQLDDVLSLDVTDVLERRLQTVVYRKGYANTPEQARQFIVHGHI 128

Query: 414 RVGRQIVNVPSFMVRVESEKHIDF 485
            +    V  P   V    E  + F
Sbjct: 129 VLDDARVTRPGMTVETAVESSVGF 152

---

>RS4_NATPD (Q3IQT8) 30S ribosomal protein S4P|
          Length = 174

 Score = 85.5 bits (210), Expect = 7e-17
 Identities = 52/145 (35%), Positives = 76/145 (52%), Gaps = 1/145 (0%)
 Frame = +3

Query: 54  PRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRRIFE-G 230
           P  P++ ER+  E  L+  YGL  K ELWR Q  L   R  AR L+   + +     E G
Sbjct: 13  PNHPFQGERIAEEGDLLSRYGLVNKEELWRAQSELRDYRREARRLIGEAQGDTVAAAEAG 72

Query: 231 AALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRH 410
           +  L R+ R G+L + +D LD +L+L   + L RRLQT+ ++ G+  +   AR  I   H
Sbjct: 73  SEFLARLKRIGVL-DDEDSLDDILSLDVTDILERRLQTVAYRKGLGNTPQQARQFIAHGH 131

Query: 411 IRVGRQIVNVPSFMVRVESEKHIDF 485
           + V    V+ PS+ V V  E  I+F
Sbjct: 132 VTVNGARVSAPSYKVDVAEEGEIEF 156

---

>RS9_TOBAC (P49214) 40S ribosomal protein S9 (S4) (Fragment)|
          Length = 77

 Score = 81.3 bits (199), Expect = 1e-15
 Identities = 37/42 (88%), Positives = 42/42 (100%)
 Frame = +3

Query: 366 AKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVESEKHIDFSL 491
           AKS+HHARVLIRQRHIRVGRQ+VNVPSFMVR++S+KHIDFSL
Sbjct: 1   AKSVHHARVLIRQRHIRVGRQVVNVPSFMVRLDSQKHIDFSL 42

---

>IMP3_MOUSE (Q921Y2) U3 small nucleolar ribonucleoprotein protein IMP3 (U3|
           snoRNP protein IMP3)
          Length = 184

 Score = 69.7 bits (169), Expect = 4e-12
 Identities = 42/130 (32%), Positives = 69/130 (53%)
 Frame = +3

Query: 90  ELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLL 269
           EL+++  Y L+ + E  R       +R  AR L  L E++P R+   AALL ++   GL+
Sbjct: 30  ELRVLRRYRLQRREEYTRYNQLSRAVRELARRLRDLPERDPFRVRASAALLDKLYAMGLV 89

Query: 270 AEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
              +  L+   +++A +F  RRL TL+ K  MA+ +  A   + Q H+RVG  +V  P+F
Sbjct: 90  PT-RGSLELCDSVSASSFCRRRLPTLLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAF 148

Query: 450 MVRVESEKHI 479
           +V    E  +
Sbjct: 149 LVTRSMEDFV 158

---

>IMP3_BOVIN (Q3T0M3) U3 small nucleolar ribonucleoprotein protein IMP3 (U3|
           snoRNP protein IMP3)
          Length = 184

 Score = 69.3 bits (168), Expect = 5e-12
 Identities = 43/132 (32%), Positives = 69/132 (52%), Gaps = 2/132 (1%)
 Frame = +3

Query: 90  ELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLL 269
           EL+++  Y L+ + +  R       +R  AR L  L E++P R+   AALL ++   GL+
Sbjct: 30  ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDPFRVRSSAALLDKLYALGLV 89

Query: 270 AE--GQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVP 443
                Q+  D+V   TA +F  RRL T++ K  MA+ +  A   + Q H+RVG  +V  P
Sbjct: 90  PTRGSQELCDFV---TASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDP 146

Query: 444 SFMVRVESEKHI 479
           +F+V    E  +
Sbjct: 147 AFLVTRSMEDFV 158

---

>IMP3_HUMAN (Q9NV31) U3 small nucleolar ribonucleoprotein protein IMP3 (U3|
           snoRNP protein IMP3) (BRMS2)
          Length = 184

 Score = 64.7 bits (156), Expect = 1e-10
 Identities = 40/130 (30%), Positives = 67/130 (51%)
 Frame = +3

Query: 90  ELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLL 269
           EL+++  Y L+ + +  R       +R  AR L  L E++  R+   AALL ++   GL+
Sbjct: 30  ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRVRASAALLDKLYALGLV 89

Query: 270 AEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
              +  L+    +TA +F  RRL T++ K  MA+ +  A   + Q H+RVG  +V  P+F
Sbjct: 90  PT-RGSLELCDFVTASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAF 148

Query: 450 MVRVESEKHI 479
           +V    E  +
Sbjct: 149 LVTRSMEDFV 158

---

>YS4L_CAEEL (O01513) Putative 40S ribosomal protein S4-like|
          Length = 183

 Score = 52.4 bits (124), Expect = 7e-07
 Identities = 37/122 (30%), Positives = 62/122 (50%), Gaps = 1/122 (0%)
 Frame = +3

Query: 126 KRELWRVQYALS-RIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVL 302
           KRE + +   L+ + R  A  +  L E +P R      +L +    GL+    D L+ + 
Sbjct: 40  KREHYALYNTLAAKSREVADLIKNLSESDPFRSKCTEDMLTKFYAAGLVPTS-DTLERIG 98

Query: 303 ALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVESEKHID 482
            +T  +F  RRL  ++   GM +S+  A  L+ Q H+R+G ++V  P+FMV   SE  I 
Sbjct: 99  KVTGASFARRRLPVVMRNIGMCESVKTASDLVEQGHVRIGTKLVTDPAFMVTRSSEDMIT 158

Query: 483 FS 488
           ++
Sbjct: 159 WT 160

---

>RS4_PELCD (Q3A6M1) 30S ribosomal protein S4|
          Length = 209

 Score = 49.3 bits (116), Expect = 6e-06
 Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 8/80 (10%)
 Frame = +3

Query: 243 RRMNR-YGLLAEGQ----DKLDYVLALTAENFLA---RRLQTLVFKAGMAKSIHHARVLI 398
           +RM R YGLL +      DK D +  +T EN L    RRL + V++ G A S    R L+
Sbjct: 61  QRMKRTYGLLEKQFRAYFDKADSMKGVTGENLLVLLERRLDSAVYRLGFASSRTEGRALV 120

Query: 399 RQRHIRVGRQIVNVPSFMVR 458
           RQ H  V  + VN+PS+++R
Sbjct: 121 RQGHFLVNGRKVNIPSYVMR 140

---

>RS4A_SYMTH (Q67JX0) 30S ribosomal protein S4 A|
          Length = 207

 Score = 48.9 bits (115), Expect = 7e-06
 Identities = 43/132 (32%), Positives = 64/132 (48%), Gaps = 5/132 (3%)
 Frame = +3

Query: 78  RLDAELKLVGE--YGLRC---KRELWRVQYALSRIRNAARHLLTLDEKNPRRIFEGAALL 242
           R   +L L GE  Y  +C   KR     Q+  SR R    + + L EK   R + G  L 
Sbjct: 14  REGVKLYLKGEKCYSDKCPIVKRATPPGQHGASR-RKPTEYAIQLREKQKARRYYGV-LE 71

Query: 243 RRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVG 422
           R+  RY  +A  +  +   + L     L RRL  +V++ G A S   AR +++  HI V 
Sbjct: 72  RQFERYFEMASRKKGVTGEVLLQT---LERRLDNVVYRMGFAASRAEARQIVKHSHIEVN 128

Query: 423 RQIVNVPSFMVR 458
            + VN+PS++VR
Sbjct: 129 GRKVNIPSYLVR 140

---

>RR4_BRYCA (P59135) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 48.5 bits (114), Expect = 1e-05
 Identities = 29/99 (29%), Positives = 49/99 (49%)
 Frame = +3

Query: 168 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 347
           +  +++ + L+EK   R   G    + +N   +  + +     VL       L  RL  +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGEVLL----QLLEMRLDNI 95

Query: 348 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVE 464
           +F+ GMA +I  AR L+  RHI V  +IVN+PS+  + E
Sbjct: 96  IFRLGMAPTIPGARQLVNHRHILVNDRIVNIPSYRCKPE 134

---

>IMP3_YEAST (P32899) U3 small nucleolar ribonucleoprotein protein IMP3 (U3|
           snoRNP protein IMP3)
          Length = 183

 Score = 47.8 bits (112), Expect = 2e-05
 Identities = 31/138 (22%), Positives = 63/138 (45%)
 Frame = +3

Query: 66  YEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRRIFEGAALLR 245
           +++++   + +++  Y ++ + +  +       IR  A  L  L   +P R      LL 
Sbjct: 21  WKQDQGHRDTQVMRTYHIQNREDYHKYNRICGDIRRLANKLSLLPPTDPFRRKHEQLLLD 80

Query: 246 RMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGR 425
           ++   G+L       D    +T      RRL  ++ +  MA++I  A   I Q H+RVG 
Sbjct: 81  KLYAMGVLTTKSKISDLENKVTVSAICRRRLPVIMHRLKMAETIQDAVKFIEQGHVRVGP 140

Query: 426 QIVNVPSFMVRVESEKHI 479
            ++N P+++V    E ++
Sbjct: 141 NLINDPAYLVTRNMEDYV 158

---

>IMP3_SCHPO (O13835) U3 small nucleolar ribonucleoprotein protein imp3 (U3|
           snoRNP protein imp3)
          Length = 183

 Score = 47.8 bits (112), Expect = 2e-05
 Identities = 30/133 (22%), Positives = 57/133 (42%)
 Frame = +3

Query: 90  ELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLL 269
           ++ ++  Y +  + E  +      + R  A  L  LD  +P R+     LL ++   G+L
Sbjct: 29  DVMVMRRYHISKREEYQKYNIICGKFRQLAHRLSLLDPTDPFRLQYENLLLEKLFDMGIL 88

Query: 270 AEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
                  D            RRL  ++ K  M++ +  A  LI Q H+RVG  ++  P++
Sbjct: 89  PSKSKMSDIENKANVSAICRRRLPVIMCKLRMSQVVSEATRLIEQGHVRVGPHVITDPAY 148

Query: 450 MVRVESEKHIDFS 488
           +V    E  + ++
Sbjct: 149 LVTRSLEDFVTWT 161

---

>RS4_FUSNN (Q8RE43) 30S ribosomal protein S4|
          Length = 195

 Score = 47.8 bits (112), Expect = 2e-05
 Identities = 32/100 (32%), Positives = 51/100 (51%)
 Frame = +3

Query: 162 RIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQ 341
           R +  A+ +  + EK  R+I+E AA  R++               V  LT   +L RRL+
Sbjct: 48  REKQKAKFIYNVMEKQFRKIYEEAA--RKLG--------------VTGLTLIEYLERRLE 91

Query: 342 TLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRV 461
            +V++ G AK+   AR ++   HI V  + VN+ SF V+V
Sbjct: 92  NVVYRLGFAKTRRQARQIVSHGHIAVNGRRVNIASFRVKV 131

---

>RR4A_CYACA (Q9TLY7) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 47.0 bits (110), Expect = 3e-05
 Identities = 21/54 (38%), Positives = 32/54 (59%)
 Frame = +3

Query: 318 NFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVESEKHI 479
           N L  RL  +V +AG+A +I  +R L+  +HI V  +IVN+PSF   +    H+
Sbjct: 86  NLLEMRLDNIVLRAGLAPTIAASRQLVSHKHIEVNNKIVNIPSFQCSIGDTIHV 139

---

>RR4_FUNHY (Q9SMG1) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 46.6 bits (109), Expect = 4e-05
 Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 14/124 (11%)
 Frame = +3

Query: 159 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 338
           S  +  +++ + L+EK   R   G    + +N   +  + +     VL       L  RL
Sbjct: 36  SAAKKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGQVLL----QLLEMRL 91

Query: 339 QTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVESE--------------KH 476
             +VF+ GMA +I  AR L+  RH+ V   IV++PS+  + E                K+
Sbjct: 92  DNIVFRLGMAPTIPGARQLVNHRHVLVNDCIVDIPSYRCKPEDSITVKNRQKSQAIITKN 151

Query: 477 IDFS 488
           IDFS
Sbjct: 152 IDFS 155

---

>RR4_DENGI (P36454) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 46.2 bits (108), Expect = 5e-05
 Identities = 28/90 (31%), Positives = 44/90 (48%)
 Frame = +3

Query: 180 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 359
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 360 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
           GMA +I  AR L+  RHI V R+IV++PSF
Sbjct: 99  GMASTIPEARQLVNHRHILVNRRIVDIPSF 128

---

>RR4_PHYPA (Q6YXP3) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 46.2 bits (108), Expect = 5e-05
 Identities = 33/124 (26%), Positives = 55/124 (44%), Gaps = 14/124 (11%)
 Frame = +3

Query: 159 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 338
           S  +  +++ + L+EK   R   G    + +N   +  + +     +L       L  RL
Sbjct: 36  STAKKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGQILL----QLLEMRL 91

Query: 339 QTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVESE--------------KH 476
             +VF+ GMA +I  AR L+  RH+ V   IV++PS+  + E                K+
Sbjct: 92  DNIVFRLGMAPTIPGARQLVNHRHVLVNDCIVDIPSYRCKPEDSITVKNRQKSQAIITKN 151

Query: 477 IDFS 488
           IDFS
Sbjct: 152 IDFS 155

---

>RS4_CARHZ (Q3A9U3) 30S ribosomal protein S4|
          Length = 208

 Score = 46.2 bits (108), Expect = 5e-05
 Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 3/101 (2%)
 Frame = +3

Query: 168 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLA---RRL 338
           +    + L L EK   +   G  L  +  RY  +AE Q        +T EN L    RRL
Sbjct: 48  KKPTEYALQLREKQKAKRIYGV-LEAQFRRYFEMAERQP------GITGENLLVILERRL 100

Query: 339 QTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRV 461
             +V++ G+A+S   AR L+R     V  + VN+PS++V+V
Sbjct: 101 DNVVYRLGLAESRAQARQLVRHNFFTVNGRKVNIPSYLVKV 141

---

>RR4_LEUSC (P59146) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 45.8 bits (107), Expect = 6e-05
 Identities = 28/94 (29%), Positives = 46/94 (48%)
 Frame = +3

Query: 168 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 347
           +  +++ + L+EK   R   G    + +N   +  + +     VL       L  RL  +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGEVLL----QLLEMRLDNI 95

Query: 348 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
           +F+ GMA +I  AR L+  RHI V   IVN+PS+
Sbjct: 96  IFRLGMAPTIPGARQLVNHRHILVNDCIVNIPSY 129

---

>RR4_HUPLU (Q5SD08) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 45.8 bits (107), Expect = 6e-05
 Identities = 26/94 (27%), Positives = 45/94 (47%)
 Frame = +3

Query: 168 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 347
           +  +++ + L+EK   R   G A  + +    +    +     VL       L  RL  +
Sbjct: 40  KKVSQYCIRLEEKQKLRFHHGLAEQQLLKYVRIARRAKGSTGQVLL----QLLEMRLDNI 95

Query: 348 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
           +F+ GMA +I  AR L+  +HI V  + +NVPS+
Sbjct: 96  IFRLGMAPTIPGARQLVNHKHILVNNRAINVPSY 129

---

>RR4_HOOLU (P59139) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 45.8 bits (107), Expect = 6e-05
 Identities = 28/94 (29%), Positives = 46/94 (48%)
 Frame = +3

Query: 168 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 347
           +  +++ + L+EK   R   G    + +N   +  + +     VL       L  RL  +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGEVLL----QLLEMRLDNI 95

Query: 348 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
           +F+ GMA +I  AR L+  RHI V   IVN+PS+
Sbjct: 96  IFRLGMAPTIPGARQLVNHRHIGVNDCIVNIPSY 129

---

>RR4_BUCRO (Q9FT08) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 45.8 bits (107), Expect = 6e-05
 Identities = 28/94 (29%), Positives = 49/94 (52%)
 Frame = +3

Query: 168 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 347
           +  +++ + L+EK   R   G    R++ +Y  +A G       ++L +      RL  +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITE-RQLLKYVRIARGAKGSTGQISLQSSEM---RLDNI 95

Query: 348 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
           +F+ G+A +I  AR L+  RHI V   IVN+PS+
Sbjct: 96  IFRLGIAPTIPGARQLVNHRHILVNNNIVNIPSY 129

---

>RR4_STICA (P36472) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 45.4 bits (106), Expect = 8e-05
 Identities = 28/90 (31%), Positives = 43/90 (47%)
 Frame = +3

Query: 180 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 359
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNIIFRL 98

Query: 360 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
           GMA +I  AR L+  RHI V  +IVN+PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVNIPSF 128

---

>RR4_MELUN (P36466) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 45.4 bits (106), Expect = 8e-05
 Identities = 33/90 (36%), Positives = 47/90 (52%)
 Frame = +3

Query: 180 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 359
           ++ + L EK   R   G    R++ RY  +A G+ K      L     L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTE-RQLLRYVYIA-GKAKRSTGQVLL--QLLEMRLDNILFRL 98

Query: 360 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
           GMA +I  AR L+  RHI V  +IVN+PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVNIPSF 128

---

>RR4_MELAL (P36465) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 45.4 bits (106), Expect = 8e-05
 Identities = 33/90 (36%), Positives = 47/90 (52%)
 Frame = +3

Query: 180 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 359
           ++ + L EK   R   G    R++ RY  +A G+ K      L     L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTE-RQLLRYVYIA-GKAKRSTGQVLL--QLLEMRLDNILFRL 98

Query: 360 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
           GMA +I  AR L+  RHI V  +IVN+PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVNIPSF 128

---

>RR4_OENHO (Q9MTP1) Chloroplast 30S ribosomal protein S4|
          Length = 203

 Score = 45.4 bits (106), Expect = 8e-05
 Identities = 27/93 (29%), Positives = 46/93 (49%)
 Frame = +3

Query: 171 NAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLV 350
           N +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++
Sbjct: 40  NKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGPTGQVLL----QLLEMRLDNIL 95

Query: 351 FKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
           F+ GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 96  FRLGMASTIPQARQLVNHRHILVNGRIVDIPSY 128

---

>RR4_LYGSP (P36464) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 33/90 (36%), Positives = 47/90 (52%)
 Frame = +3

Query: 180 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 359
           ++ + L EK   R   G    R++ RY  +A G+ K      L     L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTE-RQLLRYVQIA-GKAKRSTGQVLL--QLLEMRLDNILFRL 98

Query: 360 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
           GMA +I  AR L+  RHI V  +IVN+PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVNIPSF 128

---

>RR4_SOYBN (Q2PMU5) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 28/97 (28%), Positives = 46/97 (47%)
 Frame = +3

Query: 159 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 338
           SR    +++ + L+EK   R   G    + +    +  + +     VL       L  RL
Sbjct: 36  SRSSKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLL----QLLEMRL 91

Query: 339 QTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
             ++F+ GMA +I  AR LI  RH+ V   IV++PS+
Sbjct: 92  DNILFRLGMAATIPQARQLINHRHVLVNGHIVDIPSY 128

---

>RR4_CUCSA (Q4VZH3) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 28/97 (28%), Positives = 46/97 (47%)
 Frame = +3

Query: 159 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 338
           SR    +++ + L+EK   R   G    + +    +  + +     VL       L  RL
Sbjct: 36  SRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLL----QLLEMRL 91

Query: 339 QTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
             ++F+ GMA +I  AR L+  RHI V   IV++PS+
Sbjct: 92  DNILFRLGMASTIPQARQLVNHRHILVNGSIVDIPSY 128

---

>RS4_CAMJR (Q5HSJ7) 30S ribosomal protein S4|
          Length = 208

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 40/145 (27%), Positives = 61/145 (42%)
 Frame = +3

Query: 45  SXKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRRIF 224
           S   +RPY   +  A    + EYGL+             R +  A+ +  + EK  RR+F
Sbjct: 31  SALDKRPYAPGQHGARKGKISEYGLQL------------REKQKAKFMYGVSEKQFRRLF 78

Query: 225 EGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQ 404
             AA  RR    G+L                  L +RL  +V++ G A +   AR L+  
Sbjct: 79  AEAA--RREGNTGVL--------------LIQLLEQRLDNVVYRMGFATTRRFARQLVTH 122

Query: 405 RHIRVGRQIVNVPSFMVRVESEKHI 479
            HI V  + V++PSF V   ++  I
Sbjct: 123 GHILVNGKRVDIPSFRVEAGAKIEI 147

---

>RS4_CAMJE (Q9PM81) 30S ribosomal protein S4|
          Length = 208

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 39/145 (26%), Positives = 61/145 (42%)
 Frame = +3

Query: 45  SXKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRRIF 224
           S   +RPY   +  A    + EYGL+             R +  A+ +  + EK  RR+F
Sbjct: 31  SALDKRPYAPGQHGARKGKISEYGLQL------------REKQKAKFMYGVSEKQFRRLF 78

Query: 225 EGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQ 404
             AA  RR    G+L                  L +RL  +V++ G A +   AR L+  
Sbjct: 79  AEAA--RREGNTGVL--------------LIQLLEQRLDNIVYRMGFATTRRFARQLVTH 122

Query: 405 RHIRVGRQIVNVPSFMVRVESEKHI 479
            H+ V  + V++PSF V   ++  I
Sbjct: 123 GHVLVNGKRVDIPSFRVEAGAKIEI 147

---

>RS4B_NITEU (Q82T00) 30S ribosomal protein S4 B|
          Length = 205

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 22/54 (40%), Positives = 32/54 (59%)
 Frame = +3

Query: 309 TAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVESE 470
           T    L RRL  +VF+AG A ++  AR L+  RH+R+  + VN+PS  + V  E
Sbjct: 87  TLLQLLERRLDNVVFRAGFAPTVIAARQLVSHRHVRLNGKPVNIPSIRLNVGDE 140

---

>RR4_WATAN (O20399) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 195

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 26/91 (28%), Positives = 46/91 (50%)
 Frame = +3

Query: 177 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 356
           +++ + L+EK   R   G   L+ +    +  + +     +L       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTELQLLKYVHIAGKAKGSTGQILL----QLLEMRLDNILFR 90

Query: 357 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

---

>RR4_SPLSP (Q9FS90) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 26/94 (27%), Positives = 45/94 (47%)
 Frame = +3

Query: 168 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 347
           +  +++ + L+EK   R   G    + +N   +    +     +L       L  RL  +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARHAKGSTGEILL----QLLEMRLDNI 95

Query: 348 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
           +F+ GMA +I  AR L+  RHI V   IV++PS+
Sbjct: 96  IFRLGMAPTIPGARQLVNHRHILVNEHIVDIPSY 129

---

>RR4_DIPFO (Q9M4B9) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 27/94 (28%), Positives = 46/94 (48%)
 Frame = +3

Query: 168 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 347
           +  +++ + L+EK   R   G    + +    +  + +     VL       L  RL  +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLKYVRIARKAKGSTGQVLL----QLLEMRLDNI 95

Query: 348 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
           +F+ GMA +I  AR L+  RHI V  +IVN+PS+
Sbjct: 96  LFRLGMAPTIPGARQLVNHRHILVNDRIVNIPSY 129

---

>RR4_DIERO (O20210) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 182

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 28/97 (28%), Positives = 47/97 (48%)
 Frame = +3

Query: 159 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 338
           SR    +++ + L+EK   R   G    + +    +  + +     VL       L  RL
Sbjct: 29  SRSGKRSQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGLVLL----QLLEMRL 84

Query: 339 QTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
             ++F+ GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 85  DNILFRLGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

---

>RR4_DIEGR (O20208) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 182

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 28/97 (28%), Positives = 47/97 (48%)
 Frame = +3

Query: 159 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 338
           SR    +++ + L+EK   R   G    + +    +  + +     VL       L  RL
Sbjct: 29  SRSGKRSQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGLVLL----QLLEMRL 84

Query: 339 QTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
             ++F+ GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 85  DNILFRLGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

---

>RR4_WHEAT (Q95H61) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 28/90 (31%), Positives = 43/90 (47%)
 Frame = +3

Query: 180 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 359
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 360 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
           GMA +I  AR L+  RHI V  +IVN+PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVNIPSF 128

---

>RR4_LOTJA (Q9BBT5) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 27/97 (27%), Positives = 46/97 (47%)
 Frame = +3

Query: 159 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 338
           SR    +++ + L+EK   R   G    + +    +  + +     VL       L  RL
Sbjct: 36  SRSTKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLL----QLLEMRL 91

Query: 339 QTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
             ++F+ GMA +I  AR L+  RH+ V   IV++PS+
Sbjct: 92  DNILFRLGMASTIPQARQLVNHRHVFVNGHIVDIPSY 128

---

>RR4_CALFE (Q7YJX0) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 28/97 (28%), Positives = 47/97 (48%)
 Frame = +3

Query: 159 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 338
           SR    +++ + L+EK   R   G    + +    +  + +     VL       L  RL
Sbjct: 36  SRSGKKSQYRIRLEEKQKLRFHYGLTERQLLRYVRIAGKAKGSTGQVLL----QLLEMRL 91

Query: 339 QTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
             ++F+ GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 92  DNILFRLGMASTIPGARQLVNHRHILVNGRIVDIPSY 128

---

>RS4_BACHD (Q9K7Z8) 30S ribosomal protein S4|
          Length = 200

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 37/138 (26%), Positives = 61/138 (44%), Gaps = 4/138 (2%)
 Frame = +3

Query: 57  RRPYEK-ERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRRIFEGA 233
           +RPY   +    + K + EYGL+ +             +   RH+  ++E+  RRIF  A
Sbjct: 28  KRPYAPGQHGPNQRKKLSEYGLQLQE------------KQKLRHMYGVNERQFRRIFNDA 75

Query: 234 ALLRRMNRYGLLAEGQDKLDYVLALTAENF---LARRLQTLVFKAGMAKSIHHARVLIRQ 404
             +  ++                    ENF   L  RL  LV++ G+A++   AR L+  
Sbjct: 76  GKMAGIH-------------------GENFMILLESRLDNLVYRMGLARTRRAARQLVNH 116

Query: 405 RHIRVGRQIVNVPSFMVR 458
            HI V  Q V++PS+ V+
Sbjct: 117 GHITVDGQRVDIPSYRVK 134

---

>RR4_TRARA (P36473) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 32/90 (35%), Positives = 46/90 (51%)
 Frame = +3

Query: 180 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 359
           ++ + L EK   R   G    R++ RY  +A    K    + L     L  RL  +VF+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTE-RQLLRYVHIAGKAKKSTGQVLL---QLLEMRLDNIVFRL 98

Query: 360 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
           GMA +I  AR L+  RHI V  +IV++PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVDIPSF 128

---

>RR4_PHLPR (P69648) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 28/90 (31%), Positives = 43/90 (47%)
 Frame = +3

Query: 180 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 359
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 360 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
           GMA +I  AR L+  RHI V  +IVN+PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVNIPSF 128

---

>RR4_LOLPR (P69646) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 28/90 (31%), Positives = 43/90 (47%)
 Frame = +3

Query: 180 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 359
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 360 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
           GMA +I  AR L+  RHI V  +IVN+PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVNIPSF 128

---

>RR4_LAMAU (P69645) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 28/90 (31%), Positives = 43/90 (47%)
 Frame = +3

Query: 180 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 359
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 360 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
           GMA +I  AR L+  RHI V  +IVN+PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVNIPSF 128

---

>RR4_HORMA (P69644) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 28/90 (31%), Positives = 43/90 (47%)
 Frame = +3

Query: 180 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 359
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 360 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
           GMA +I  AR L+  RHI V  +IVN+PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVNIPSF 128

---

>RR4_FESPR (P36459) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 28/90 (31%), Positives = 43/90 (47%)
 Frame = +3

Query: 180 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 359
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 360 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
           GMA +I  AR L+  RHI V  +IVN+PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVNIPSF 128

---

>RR4_FESGI (P69642) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 28/90 (31%), Positives = 43/90 (47%)
 Frame = +3

Query: 180 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 359
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 360 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
           GMA +I  AR L+  RHI V  +IVN+PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVNIPSF 128

---

>RR4_ELYCA (P69641) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 28/90 (31%), Positives = 43/90 (47%)
 Frame = +3

Query: 180 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 359
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 360 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
           GMA +I  AR L+  RHI V  +IVN+PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVNIPSF 128

---

>RR4_ELEIN (P36456) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 32/90 (35%), Positives = 46/90 (51%)
 Frame = +3

Query: 180 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 359
           ++ + L EK   R   G    R++ RY  +A    K    + L     L  RL  +VF+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTE-RQLLRYVHIAGKAKKSTGQVLL---QLLEMRLDNIVFRL 98

Query: 360 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
           GMA +I  AR L+  RHI V  +IV++PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVDIPSF 128

---

>RR4_DESFL (P69640) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 28/90 (31%), Positives = 43/90 (47%)
 Frame = +3

Query: 180 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 359
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 360 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
           GMA +I  AR L+  RHI V  +IVN+PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVNIPSF 128

---

>RR4_CINLA (P69638) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 28/90 (31%), Positives = 43/90 (47%)
 Frame = +3

Query: 180 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 359
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 360 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
           GMA +I  AR L+  RHI V  +IVN+PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVNIPSF 128

---

>RR4_CALEP (P69637) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 28/90 (31%), Positives = 43/90 (47%)
 Frame = +3

Query: 180 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 359
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 360 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
           GMA +I  AR L+  RHI V  +IVN+PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVNIPSF 128

---

>RR4_BROER (P36451) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 28/90 (31%), Positives = 43/90 (47%)
 Frame = +3

Query: 180 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 359
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 360 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
           GMA +I  AR L+  RHI V  +IVN+PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVNIPSF 128

---

>RR4_ALOPR (P69630) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 28/90 (31%), Positives = 43/90 (47%)
 Frame = +3

Query: 180 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 359
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 360 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
           GMA +I  AR L+  RHI V  +IVN+PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVNIPSF 128

---

>RR4_BRASY (P69636) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 28/90 (31%), Positives = 43/90 (47%)
 Frame = +3

Query: 180 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 359
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 360 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
           GMA +I  AR L+  RHI V  +IVN+PSF
Sbjct: 99  GMAATIPGARQLVNHRHILVNGRIVNIPSF 128

---

>RR4_BRAPI (P69635) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 28/90 (31%), Positives = 43/90 (47%)
 Frame = +3

Query: 180 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 359
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 360 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
           GMA +I  AR L+  RHI V  +IVN+PSF
Sbjct: 99  GMAATIPGARQLVNHRHILVNGRIVNIPSF 128

---

>RS4_BACTN (Q8A4A1) 30S ribosomal protein S4|
          Length = 201

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 35/118 (29%), Positives = 55/118 (46%)
 Frame = +3

Query: 105 GEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQD 284
           G++G   KR+       L R +  A++   + EK  R +FE AA  + +    LL     
Sbjct: 34  GQHGNSRKRKTSEYGVQL-REKQKAKYTYGVLEKQFRNLFEKAATAKGITGEVLL----- 87

Query: 285 KLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVR 458
                        L  RL  +VF+ G+A +   AR L+  +HI V  ++VN+PSF V+
Sbjct: 88  -----------QLLEGRLDNVVFRLGIAPTRAAARQLVSHKHITVDGEVVNIPSFAVK 134

---

>RS4_BACFR (Q64NN4) 30S ribosomal protein S4|
          Length = 201

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 35/118 (29%), Positives = 55/118 (46%)
 Frame = +3

Query: 105 GEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQD 284
           G++G   KR+       L R +  A++   + EK  R +FE AA  + +    LL     
Sbjct: 34  GQHGNSRKRKTSEYGIQL-REKQKAKYTYGVLEKQFRNLFEKAATAKGITGEVLL----- 87

Query: 285 KLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVR 458
                        L  RL  +VF+ G+A +   AR L+  +HI V  Q+VN+PS+ V+
Sbjct: 88  -----------QMLEGRLDNIVFRLGIAPTRAAARQLVGHKHITVDGQVVNIPSYAVK 134

---

>RS4_BACFN (Q5L8D5) 30S ribosomal protein S4|
          Length = 201

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 35/118 (29%), Positives = 55/118 (46%)
 Frame = +3

Query: 105 GEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQD 284
           G++G   KR+       L R +  A++   + EK  R +FE AA  + +    LL     
Sbjct: 34  GQHGNSRKRKTSEYGIQL-REKQKAKYTYGVLEKQFRNLFEKAATAKGITGEVLL----- 87

Query: 285 KLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVR 458
                        L  RL  +VF+ G+A +   AR L+  +HI V  Q+VN+PS+ V+
Sbjct: 88  -----------QMLEGRLDNIVFRLGIAPTRAAARQLVGHKHITVDGQVVNIPSYAVK 134

---

>RR4_TOBAC (P06359) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 28/97 (28%), Positives = 47/97 (48%)
 Frame = +3

Query: 159 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 338
           SR    +++ + L+EK   R   G    + +    +  + +     VL       L  RL
Sbjct: 36  SRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIARKAKGSTGQVLL----QLLEMRL 91

Query: 339 QTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
             ++F+ GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 92  DNILFRLGMASTIPAARQLVNHRHILVNGRIVDIPSY 128

---

>RR4_ORYSA (P12147) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 27/90 (30%), Positives = 43/90 (47%)
 Frame = +3

Query: 180 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 359
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKSSTGQVLL----QLLEMRLDNILFRL 98

Query: 360 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
           GMA +I  AR L+  RHI V  +IV++PSF
Sbjct: 99  GMASTIPEARQLVNHRHILVNGRIVDIPSF 128

---

>RR4_ORYNI (Q6ENH2) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 27/90 (30%), Positives = 43/90 (47%)
 Frame = +3

Query: 180 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 359
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKSSTGQVLL----QLLEMRLDNILFRL 98

Query: 360 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
           GMA +I  AR L+  RHI V  +IV++PSF
Sbjct: 99  GMASTIPEARQLVNHRHILVNGRIVDIPSF 128

---

>RR4_NICTO (Q33C33) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 28/97 (28%), Positives = 47/97 (48%)
 Frame = +3

Query: 159 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 338
           SR    +++ + L+EK   R   G    + +    +  + +     VL       L  RL
Sbjct: 36  SRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIARKAKGSTGQVLL----QLLEMRL 91

Query: 339 QTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
             ++F+ GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 92  DNILFRLGMASTIPAARQLVNHRHILVNGRIVDIPSY 128

---

>RR4_NICSY (Q3C1H5) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 28/97 (28%), Positives = 47/97 (48%)
 Frame = +3

Query: 159 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 338
           SR    +++ + L+EK   R   G    + +    +  + +     VL       L  RL
Sbjct: 36  SRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIARKAKGSTGQVLL----QLLEMRL 91

Query: 339 QTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
             ++F+ GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 92  DNILFRLGMASTIPAARQLVNHRHILVNGRIVDIPSY 128

---

>RR4_LACSA (Q332X6) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 28/97 (28%), Positives = 47/97 (48%)
 Frame = +3

Query: 159 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 338
           SR    +++ + L+EK   R   G    + +    +  + +     VL       L  RL
Sbjct: 36  SRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLL----QLLEMRL 91

Query: 339 QTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
             ++F+ GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 92  DNILFRLGMAPTIPGARQLVNHRHILVNGRIVDIPSY 128

---

>RR4_CHLRE (P48270) Chloroplast 30S ribosomal protein S4|
          Length = 257

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 22/46 (47%), Positives = 29/46 (63%)
 Frame = +3

Query: 321 FLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVR 458
           FL  RL  +VF+  MA +I  AR LI   HIRV  + VN+PS+M +
Sbjct: 107 FLEMRLDNIVFRLNMAPTIPAARQLISHGHIRVNNKKVNIPSYMCK 152

---

>RR4_ATRBE (Q8S8X2) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 28/97 (28%), Positives = 47/97 (48%)
 Frame = +3

Query: 159 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 338
           SR    +++ + L+EK   R   G    + +    +  + +     VL       L  RL
Sbjct: 36  SRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIARKAKGSTGQVLL----QLLEMRL 91

Query: 339 QTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
             ++F+ GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 92  DNILFRLGMASTIPAARQLVNHRHILVNGRIVDIPSY 128

---

>RT04_RECAM (O21263) Mitochondrial ribosomal protein S4|
          Length = 249

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 17/45 (37%), Positives = 31/45 (68%)
 Frame = +3

Query: 324 LARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVR 458
           L RRL  ++++AG   SI+ AR+L+  +H+ V  +I N+ S++V+
Sbjct: 131 LERRLDIIIYRAGFVNSIYQARLLVNHKHVLVNNKIQNISSYLVQ 175

---

>RR4_SPHDO (Q9FSA4) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 27/94 (28%), Positives = 46/94 (48%)
 Frame = +3

Query: 168 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 347
           +  +++ + L+EK   R   G    + +N   +    +     VL   +E     RL  +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARRAKGSTGEVLLQLSE----MRLDNV 95

Query: 348 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
           +F+ GMA +I  AR L+  RHI V   IV++PS+
Sbjct: 96  IFRLGMAPTIPGARQLVNHRHILVNDYIVDIPSY 129

---

>RR4_HYPAR (P59141) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 26/94 (27%), Positives = 46/94 (48%)
 Frame = +3

Query: 168 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 347
           +  +++ + L+EK   R   G    + +N   +  + +     VL       L  RL  +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGEVLL----QLLEMRLDNV 95

Query: 348 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
           +F+ GMA +I  AR L+  RHI V   +V++PS+
Sbjct: 96  IFRLGMAPTIPGARQLVNHRHILVNDYVVDIPSY 129

---

>RR4_HYLSP (P59140) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 27/94 (28%), Positives = 45/94 (47%)
 Frame = +3

Query: 168 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 347
           +  +++ + L+EK   R   G    + +N   +    +     VL       L  RL  +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARRAKGSTGEVLL----QLLEMRLDNV 95

Query: 348 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
           +F+ GMA +I  AR L+  RHI V   IV++PS+
Sbjct: 96  IFRLGMAPTIPGARQLVNHRHILVNDYIVDIPSY 129

---

>RR4_OROMI (O78678) Plastid 30S ribosomal protein S4|
          Length = 203

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 27/97 (27%), Positives = 47/97 (48%)
 Frame = +3

Query: 159 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 338
           SR    +++ + L+EK   R   G    + +    +  + +     VL       L  RL
Sbjct: 36  SRFVKKSQYRIRLEEKQKLRFHYGLTERQLLKYIRIAGKAKGSTGQVLL----QLLEMRL 91

Query: 339 QTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
             ++F+ GMA +I  AR L+  RH+ V  +IV++PS+
Sbjct: 92  DNILFRLGMALTIPAARQLVNHRHVLVNGRIVDIPSY 128

---

>RS4_PORGI (Q7MTN9) 30S ribosomal protein S4|
          Length = 201

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 32/104 (30%), Positives = 50/104 (48%)
 Frame = +3

Query: 147 QYALSRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFL 326
           Q+  +R R  + + L L EK   +   G  +L +  R+  L     +   V       FL
Sbjct: 35  QHGNNRRRKTSEYGLQLREKQKAKYTYG--VLEKQFRH--LFHRAQRAKGVTGELLIQFL 90

Query: 327 ARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVR 458
             RL  +VF+ G+A +   AR L+  RHI V   +VN+PS+ V+
Sbjct: 91  EARLDNVVFRLGIAPTRSAARQLVSHRHITVDGSVVNIPSYSVK 134

---

>RR4_SPIOL (P13788) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 28/97 (28%), Positives = 47/97 (48%)
 Frame = +3

Query: 159 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 338
           SR    +++ + L+EK   R   G    + +    +  + +     VL       L  RL
Sbjct: 36  SRSGKRSQYRIRLEEKQKLRFHYGITERQLLKYVRIARKAKGSTGQVLL----QLLEMRL 91

Query: 339 QTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
             ++F+ GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 92  DNILFRLGMAPTIPGARQLVNHRHILVNGRIVDIPSY 128

---

>RR4_SOLTU (Q2VEH5) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 28/97 (28%), Positives = 46/97 (47%)
 Frame = +3

Query: 159 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 338
           SR    +++ + L+EK   R   G    + +    +  + +     VL       L  RL
Sbjct: 36  SRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIARKAKGSTGQVLL----QLLEMRL 91

Query: 339 QTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
             ++F+ GMA +I  AR L+  RHI V   IV++PS+
Sbjct: 92  DNILFRLGMASTIPAARQLVNHRHILVNGHIVDIPSY 128

---

>RR4_SOLBU (Q2MII5) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 28/97 (28%), Positives = 46/97 (47%)
 Frame = +3

Query: 159 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 338
           SR    +++ + L+EK   R   G    + +    +  + +     VL       L  RL
Sbjct: 36  SRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIARKAKGSTGQVLL----QLLEMRL 91

Query: 339 QTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
             ++F+ GMA +I  AR L+  RHI V   IV++PS+
Sbjct: 92  DNILFRLGMASTIPAARQLVNHRHILVNGHIVDIPSY 128

---

>RR4_PHAAO (Q3BAN8) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 27/96 (28%), Positives = 46/96 (47%)
 Frame = +3

Query: 162 RIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQ 341
           R    +++ + L+EK   R   G    + +    +  + +     VL       L  RL 
Sbjct: 37  RFGKRSQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQVLL----QLLEMRLD 92

Query: 342 TLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
            ++F+ GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 93  NILFRLGMASTIPGARQLVNHRHILVNGRIVDIPSY 128

---

>RR4_LYCES (Q2MI98) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 28/97 (28%), Positives = 46/97 (47%)
 Frame = +3

Query: 159 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 338
           SR    +++ + L+EK   R   G    + +    +  + +     VL       L  RL
Sbjct: 36  SRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIARKAKGSTGQVLL----QLLEMRL 91

Query: 339 QTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
             ++F+ GMA +I  AR L+  RHI V   IV++PS+
Sbjct: 92  DNILFRLGMASTIPAARQLVNHRHILVNGHIVDIPSY 128

---

>RR4_EUCGG (Q49KZ6) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 28/97 (28%), Positives = 46/97 (47%)
 Frame = +3

Query: 159 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 338
           SR    +++ + L+EK   R   G    + +    +  + +     VL       L  RL
Sbjct: 36  SRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLL----QLLEMRL 91

Query: 339 QTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
             ++F+ GMA +I  AR L+  RHI V   IV++PS+
Sbjct: 92  DNILFRLGMASTIPQARQLVNHRHILVNGCIVDIPSY 128

---

>RR4_AMBTC (Q70Y01) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 27/97 (27%), Positives = 47/97 (48%)
 Frame = +3

Query: 159 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 338
           SR    +++ + L+EK   R   G    + +    +  + +     VL       L  RL
Sbjct: 36  SRSGKRSQYRIRLEEKQKLRFHYGLTERQLLRYVRIAGKAKGSTGQVLL----QLLEMRL 91

Query: 339 QTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
             ++F+ GMA +I  AR L+  RHI V  ++V++PS+
Sbjct: 92  DNILFRLGMASTIPGARQLVNHRHILVNGRLVDIPSY 128

---

>RR4_RHAHU (P36470) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 43.5 bits (101), Expect = 3e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = +3

Query: 177 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 356
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 42  SQYRIRLEEKQKLRFHYGLTERQLVRYVHIAGKAKGSTGQVLL----QLLEMRLDNILFR 97

Query: 357 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 98  LGMASTIPRARQLVNHRHILVNGRIVDIPSY 128

---

>RR4_ANTOD (P36447) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 43.5 bits (101), Expect = 3e-04
 Identities = 28/90 (31%), Positives = 42/90 (46%)
 Frame = +3

Query: 180 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 359
           ++ + L EK   R   G    + +    +  + +     VL       L  RL   +F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNTLFRL 98

Query: 360 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
           GMA +I  AR L+  RHI V  +IVN+PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVNIPSF 128

---

>RR4_CATCI (P59137) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 43.5 bits (101), Expect = 3e-04
 Identities = 26/94 (27%), Positives = 46/94 (48%)
 Frame = +3

Query: 168 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 347
           +  +++ + L+EK   R   G    + +N   +  + +     VL       L  RL  +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGEVLL----QLLEMRLDNI 95

Query: 348 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
           +F+ GM+ +I  AR L+  RHI V   IV++PS+
Sbjct: 96  IFRLGMSPTIPGARQLVNHRHILVNGYIVDIPSY 129

---

>RS4_DESPS (Q6AP44) 30S ribosomal protein S4|
          Length = 210

 Score = 43.1 bits (100), Expect = 4e-04
 Identities = 41/143 (28%), Positives = 65/143 (45%), Gaps = 11/143 (7%)
 Frame = +3

Query: 60  RPYEKERLDAELKLVGEYGLRC---KRELWRVQYALSRIRNAARHLLTLDEKNPRRIFEG 230
           R   +E L   LK    Y  +C   +R     Q+  +R +  + + + L EK   +    
Sbjct: 10  RRCRRENLKLFLKGDRCYSDKCSFERRAFAPGQHGQARFKKVSDYAVQLREKQKVK---- 65

Query: 231 AALLRRMNRYGLLAEGQDKLDYVLA-----LTAENFLA---RRLQTLVFKAGMAKSIHHA 386
                  + YG+L E Q +L +  A     +  EN L    RRL   VF+AG A S   A
Sbjct: 66  -------SMYGVL-EAQFRLTFEKAEAQKGVAGENLLILLERRLDNAVFRAGFASSRTQA 117

Query: 387 RVLIRQRHIRVGRQIVNVPSFMV 455
           R ++R +HI +  + V++PS+ V
Sbjct: 118 RQIVRHKHILINGKRVDIPSYQV 140

---

>RS4_UREPA (Q9PPZ2) 30S ribosomal protein S4|
          Length = 202

 Score = 43.1 bits (100), Expect = 4e-04
 Identities = 28/75 (37%), Positives = 38/75 (50%)
 Frame = +3

Query: 243 RRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVG 422
           RR+ R  L   G      VL L     L  RL +LV++AG A +   AR L+   H+ V 
Sbjct: 71  RRLYRVALGRPG------VLTLNLLQVLESRLDSLVYRAGFAPTRRAARQLVNHSHVLVN 124

Query: 423 RQIVNVPSFMVRVES 467
            + VN+PS +V V S
Sbjct: 125 NKKVNIPSALVEVGS 139

---

>RR4_TIGSP (O36057) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 182

 Score = 43.1 bits (100), Expect = 4e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = +3

Query: 177 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 356
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQVLL----QLLEMRLDNILFR 90

Query: 357 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

---

>RR4_NEOSP (O36051) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 182

 Score = 43.1 bits (100), Expect = 4e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = +3

Query: 177 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 356
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQVLL----QLLEMRLDNILFR 90

Query: 357 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

---

>RR4_LIBFO (O20254) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 182

 Score = 43.1 bits (100), Expect = 4e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = +3

Query: 177 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 356
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQVLL----QLLEMRLDNILFR 90

Query: 357 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

---

>RR4_ISOTA (O20236) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 182

 Score = 43.1 bits (100), Expect = 4e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = +3

Query: 177 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 356
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLRYVHIAGKAKGSTGQVLL----QLLEMRLDNILFR 90

Query: 357 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

---

>RR4_IRILU (O20235) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 182

 Score = 43.1 bits (100), Expect = 4e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = +3

Query: 177 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 356
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQVLL----QLLEMRLDNILFR 90

Query: 357 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

---

>RR4_CANTA (P59136) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 43.1 bits (100), Expect = 4e-04
 Identities = 25/94 (26%), Positives = 46/94 (48%)
 Frame = +3

Query: 168 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 347
           +  +++ + L+EK   R   G    + +N   +  + +     +L       L  RL  +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGEILL----QLLEMRLDNV 95

Query: 348 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
           +F+ GM+ +I  AR L+  RHI V   IV++PS+
Sbjct: 96  IFRLGMSPTIPGARQLVNHRHILVNGHIVDIPSY 129

---

>RR4_ALOVE (O19986) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 182

 Score = 43.1 bits (100), Expect = 4e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = +3

Query: 177 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 356
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQVLL----QLLEMRLDNILFR 90

Query: 357 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

---

>RS4_THEFY (Q47R66) 30S ribosomal protein S4|
          Length = 203

 Score = 43.1 bits (100), Expect = 4e-04
 Identities = 38/121 (31%), Positives = 57/121 (47%), Gaps = 3/121 (2%)
 Frame = +3

Query: 105 GEYGLRCKRELWRVQYALSRI-RNAARHLLTLDEKNPRRIFEGAALLRRMNRYG--LLAE 275
           GE+G R +R      YA+ +  +   R    L EK   R++E A   +R  R G  ++AE
Sbjct: 34  GEHGRRVRRST--SDYAVRQAEKQKLRWYYDLSEKQLARVYENAK--KRPGRTGEEMIAE 89

Query: 276 GQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMV 455
                           L  RL T++ +AG A SI+ AR  I   HI V  + V++PS+ V
Sbjct: 90  ----------------LELRLATVLLRAGFAASIYAARQFINHGHITVDGKKVDIPSYQV 133

Query: 456 R 458
           +
Sbjct: 134 K 134

---

>RS4_STRCO (Q9KXP5) 30S ribosomal protein S4|
          Length = 204

 Score = 43.1 bits (100), Expect = 4e-04
 Identities = 21/45 (46%), Positives = 31/45 (68%)
 Frame = +3

Query: 324 LARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVR 458
           L RRL  LV ++G+A++I+ AR ++   HI+V  Q V+ PSF VR
Sbjct: 90  LERRLDALVLRSGIARTIYQARQMVVHGHIQVNGQKVDKPSFRVR 134

---

>RR4_YUCFI (P69679) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 43.1 bits (100), Expect = 4e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = +3

Query: 177 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 356
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 42  SQYRIRLEEKQKLRFHYGLTERQLLRYVHIAGKAKGSTGQVLL----QLLEMRLDNILFR 97

Query: 357 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 98  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 128

---

>RR4_IRIPA (P36461) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 43.1 bits (100), Expect = 4e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = +3

Query: 177 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 356
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 42  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQVLL----QLLEMRLDNILFR 97

Query: 357 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 98  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 128

---

>RR4_ASPSB (O47026) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 43.1 bits (100), Expect = 4e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = +3

Query: 177 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 356
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 42  SQYRIRLEEKQKLRFHYGLTERQLLRYVHIAGKAKGSTGQVLL----QLLEMRLDNILFR 97

Query: 357 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 98  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 128

---

>RR4_AGABR (P69629) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 43.1 bits (100), Expect = 4e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = +3

Query: 177 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 356
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 42  SQYRIRLEEKQKLRFHYGLTERQLLRYVHIAGKAKGSTGQVLL----QLLEMRLDNILFR 97

Query: 357 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 98  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 128

---

>RR4_STAPU (Q32RY4) Chloroplast 30S ribosomal protein S4|
          Length = 212

 Score = 43.1 bits (100), Expect = 4e-04
 Identities = 26/97 (26%), Positives = 46/97 (47%)
 Frame = +3

Query: 159 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 338
           S+ ++ + + + L+EK   R   G    + +    L    +     VL       L  RL
Sbjct: 36  SQRKDKSEYRIRLEEKQKLRFHYGITERQLLRYVRLARRAKGSTGQVLL----QLLEMRL 91

Query: 339 QTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
             ++F+ GMA +I  AR L+   H+ V  ++V++PSF
Sbjct: 92  DNIIFRLGMAPTIPAARQLVNHGHVLVNERVVDIPSF 128

---

>RR4_SISST (P69652) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 194

 Score = 43.1 bits (100), Expect = 4e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = +3

Query: 177 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 356
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQVLL----QLLEMRLDNILFR 90

Query: 357 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

---

>RR4_SISSP (P69651) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 194

 Score = 43.1 bits (100), Expect = 4e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = +3

Query: 177 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 356
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQVLL----QLLEMRLDNILFR 90

Query: 357 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

---

>RR4_CYPSP (O20106) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 194

 Score = 43.1 bits (100), Expect = 4e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = +3

Query: 177 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 356
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHMAGKAKGSTGQVLL----QLLEMRLDNILFR 90

Query: 357 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

---

>RR4_HYPFI (P59144) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 42.7 bits (99), Expect = 5e-04
 Identities = 26/94 (27%), Positives = 45/94 (47%)
 Frame = +3

Query: 168 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 347
           +  +++ + L+EK   R   G    + +N   +  + +     VL       L  RL  +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGEVLL----QLLEMRLDNV 95

Query: 348 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
           +F+ GM  +I  AR L+  RHI V   IV++PS+
Sbjct: 96  IFRLGMTPTIPGARQLVNHRHILVNDYIVDIPSY 129

---

>RR4_NERBO (O20265) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 182

 Score = 42.7 bits (99), Expect = 5e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = +3

Query: 177 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 356
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLRYVHIARKAKGSTGQVLL----QLLEMRLDNILFR 90

Query: 357 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

---

>RR4_HYMLI (O20230) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 182

 Score = 42.7 bits (99), Expect = 5e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = +3

Query: 177 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 356
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLRYVQIARKAKGSTGQVLL----QLLEMRLDNILFR 90

Query: 357 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

---

>RR4_HEAMA (O20231) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 182

 Score = 42.7 bits (99), Expect = 5e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = +3

Query: 177 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 356
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLRYVHIARKAKGSTGQVLL----QLLEMRLDNILFR 90

Query: 357 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

---

>RS4_LACAC (Q5FKX2) 30S ribosomal protein S4|
          Length = 203

 Score = 42.7 bits (99), Expect = 5e-04
 Identities = 23/69 (33%), Positives = 40/69 (57%)
 Frame = +3

Query: 255 RYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIV 434
           R G + EGQ  +++++       L RRL ++V++ G+A +   AR L+   HI V  + V
Sbjct: 74  RAGKIREGQHGINFMI------LLERRLDSIVYRLGLATTREQARQLVNHGHITVDGKRV 127

Query: 435 NVPSFMVRV 461
           ++PS+ V V
Sbjct: 128 DIPSYEVSV 136

---

>RR4_SACOF (Q6ENW1) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 42.7 bits (99), Expect = 5e-04
 Identities = 27/90 (30%), Positives = 43/90 (47%)
 Frame = +3

Query: 180 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 359
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 360 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
           GMA +I  AR L+  RHI V  +IV++PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVDIPSF 128

---

>RR4_SACHY (Q6L397) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 42.7 bits (99), Expect = 5e-04
 Identities = 27/90 (30%), Positives = 43/90 (47%)
 Frame = +3

Query: 180 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 359
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 360 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
           GMA +I  AR L+  RHI V  +IV++PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVDIPSF 128

---

>RR4_MAIZE (P02355) Chloroplast 30S ribosomal protein S4 (Basic protein)|
          Length = 201

 Score = 42.7 bits (99), Expect = 5e-04
 Identities = 27/90 (30%), Positives = 43/90 (47%)
 Frame = +3

Query: 180 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 359
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 360 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
           GMA +I  AR L+  RHI V  +IV++PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVDIPSF 128

---

>RR4_LOPST (P59148) Chloroplast 30S ribosomal protein S4|
          Length = 203

 Score = 42.7 bits (99), Expect = 5e-04
 Identities = 25/94 (26%), Positives = 45/94 (47%)
 Frame = +3

Query: 168 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 347
           +  +++ + L+EK   R   G    + +N   +  + +     +L       L  RL  +
Sbjct: 41  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGEILL----QLLEMRLDNI 96

Query: 348 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
           +F+ GM  +I  AR L+  RHI V   IV++PS+
Sbjct: 97  IFRLGMTPTIPGARQLVNHRHILVNGYIVDIPSY 130

---

>RR4_LOPCO (P59147) Chloroplast 30S ribosomal protein S4|
          Length = 203

 Score = 42.7 bits (99), Expect = 5e-04
 Identities = 25/94 (26%), Positives = 45/94 (47%)
 Frame = +3

Query: 168 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 347
           +  +++ + L+EK   R   G    + +N   +  + +     +L       L  RL  +
Sbjct: 41  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGEILL----QLLEMRLDNI 96

Query: 348 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
           +F+ GM  +I  AR L+  RHI V   IV++PS+
Sbjct: 97  IFRLGMTPTIPGARQLVNHRHILVNGYIVDIPSY 130

---

>RR4_GOSHI (Q2L908) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 42.7 bits (99), Expect = 5e-04
 Identities = 27/97 (27%), Positives = 46/97 (47%)
 Frame = +3

Query: 159 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 338
           SR    +++ + L+EK   R   G    + +    +  + +     VL       L  RL
Sbjct: 36  SRPGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIARKAKGSTGQVLL----QLLEMRL 91

Query: 339 QTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
             ++F+ GMA +I  AR L+  RHI V  + V++PS+
Sbjct: 92  DNILFRLGMASTIPQARQLVNHRHILVNGRTVDIPSY 128

---

>RR4_ACOCL (Q3V532) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 42.7 bits (99), Expect = 5e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = +3

Query: 177 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 356
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 42  SQYRIRLEEKQKLRFHYGLTERQLLRYVHIAGKAKGSTGQVLL----QLLEMRLDNILFR 97

Query: 357 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 98  LGMAPTIPGARQLVNHRHILVNGRIVDIPSY 128

---

>RS4_WOLSU (Q7M8F6) 30S ribosomal protein S4|
          Length = 208

 Score = 42.7 bits (99), Expect = 5e-04
 Identities = 37/137 (27%), Positives = 57/137 (41%)
 Frame = +3

Query: 45  SXKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRRIF 224
           S   +RPY   +       + EYGL+ +             +  A+ +  + EK  R IF
Sbjct: 31  SSLEKRPYAPGQHGQRRSKISEYGLQLRE------------KQKAKFMYGISEKQFRSIF 78

Query: 225 EGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQ 404
           + A  L      G   E   KL           L RRL  +V++ G A +   AR ++  
Sbjct: 79  QEANRLE-----GNTGELLIKL-----------LERRLDNVVYRMGFATTRRFARQMVSH 122

Query: 405 RHIRVGRQIVNVPSFMV 455
            H+ V  + VN+PS+MV
Sbjct: 123 GHVLVDGKRVNIPSYMV 139

---

>RR4_GLAPA (O20221) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 197

 Score = 42.7 bits (99), Expect = 5e-04
 Identities = 25/91 (27%), Positives = 45/91 (49%)
 Frame = +3

Query: 177 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 356
           +++ + L+EK   R   G    + +    +  + +     +L       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQILL----QLLEMRLDNILFR 90

Query: 357 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

---

>RR4_WOOUN (P59152) Chloroplast 30S ribosomal protein S4|
          Length = 185

 Score = 42.7 bits (99), Expect = 5e-04
 Identities = 20/42 (47%), Positives = 28/42 (66%)
 Frame = +3

Query: 324 LARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
           L  RL  ++F+ GMA +I  AR L+  RHI V  +IV+VPS+
Sbjct: 70  LEMRLDNVIFRLGMASTIPAARQLVNHRHILVNNRIVDVPSY 111

---

>RR4_WOORA (P59151) Chloroplast 30S ribosomal protein S4|
          Length = 185

 Score = 42.7 bits (99), Expect = 5e-04
 Identities = 20/42 (47%), Positives = 28/42 (66%)
 Frame = +3

Query: 324 LARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
           L  RL  ++F+ GMA +I  AR L+  RHI V  +IV+VPS+
Sbjct: 70  LEMRLDNVIFRLGMASTIPAARQLVNHRHILVNNRIVDVPSY 111

---

>RR4_SPASP (O36054) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 183

 Score = 42.7 bits (99), Expect = 5e-04
 Identities = 25/91 (27%), Positives = 45/91 (49%)
 Frame = +3

Query: 177 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 356
           +++ + L+EK   R   G    + +    +  + +     +L       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQILL----QLLEMRLDNILFR 90

Query: 357 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

---

>RR4_MICJU (P69647) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 183

 Score = 42.7 bits (99), Expect = 5e-04
 Identities = 25/91 (27%), Positives = 45/91 (49%)
 Frame = +3

Query: 177 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 356
           +++ + L+EK   R   G    + +    +  + +     +L       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQILL----QLLEMRLDNILFR 90

Query: 357 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

---

>RR4_LAPNE (O20255) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 183

 Score = 42.7 bits (99), Expect = 5e-04
 Identities = 25/91 (27%), Positives = 45/91 (49%)
 Frame = +3

Query: 177 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 356
           +++ + L+EK   R   G    + +    +  + +     +L       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQILL----QLLEMRLDNILFR 90

Query: 357 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

---

>RR4_GLACO (P69643) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 183

 Score = 42.7 bits (99), Expect = 5e-04
 Identities = 25/91 (27%), Positives = 45/91 (49%)
 Frame = +3

Query: 177 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 356
           +++ + L+EK   R   G    + +    +  + +     +L       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQILL----QLLEMRLDNILFR 90

Query: 357 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

---

>RR4_FRESP (O20215) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 183

 Score = 42.7 bits (99), Expect = 5e-04
 Identities = 25/91 (27%), Positives = 45/91 (49%)
 Frame = +3

Query: 177 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 356
           +++ + L+EK   R   G    + +    +  + +     +L       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQILL----QLLEMRLDNILFR 90

Query: 357 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

---

>RR4_CROSP (O20103) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 183

 Score = 42.7 bits (99), Expect = 5e-04
 Identities = 25/91 (27%), Positives = 45/91 (49%)
 Frame = +3

Query: 177 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 356
           +++ + L+EK   R   G    + +    +  + +     +L       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQILL----QLLEMRLDNILFR 90

Query: 357 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

---

>RR4_CRONU (P69639) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 183

 Score = 42.7 bits (99), Expect = 5e-04
 Identities = 25/91 (27%), Positives = 45/91 (49%)
 Frame = +3

Query: 177 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 356
           +++ + L+EK   R   G    + +    +  + +     +L       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQILL----QLLEMRLDNILFR 90

Query: 357 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

---

>RR4_BABST (O19995) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 183

 Score = 42.7 bits (99), Expect = 5e-04
 Identities = 25/91 (27%), Positives = 45/91 (49%)
 Frame = +3

Query: 177 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 356
           +++ + L+EK   R   G    + +    +  + +     +L       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQILL----QLLEMRLDNILFR 90

Query: 357 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

---

>RR4_ARIPL (P69633) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 183

 Score = 42.7 bits (99), Expect = 5e-04
 Identities = 25/91 (27%), Positives = 45/91 (49%)
 Frame = +3

Query: 177 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 356
           +++ + L+EK   R   G    + +    +  + +     +L       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQILL----QLLEMRLDNILFR 90

Query: 357 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNDRIVDIPSY 121

---

>RR4_ARICA (P69632) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 183

 Score = 42.7 bits (99), Expect = 5e-04
 Identities = 25/91 (27%), Positives = 45/91 (49%)
 Frame = +3

Query: 177 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 356
           +++ + L+EK   R   G    + +    +  + +     +L       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQILL----QLLEMRLDNILFR 90

Query: 357 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNDRIVDIPSY 121

---

>RS4_LISMO (Q8Y6T6) 30S ribosomal protein S4|
          Length = 200

 Score = 42.7 bits (99), Expect = 5e-04
 Identities = 38/139 (27%), Positives = 60/139 (43%), Gaps = 4/139 (2%)
 Frame = +3

Query: 57  RRPYEK-ERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRRIFEGA 233
           RRPY   +    + K + EYGL+               +   RH+  L E+  +  F  A
Sbjct: 28  RRPYAPGQHGPTQRKKISEYGLQQAE------------KQKLRHMYGLTERQFKNTFNKA 75

Query: 234 ALLRRMNRYGLLAEGQDKLDYVLALTAENF---LARRLQTLVFKAGMAKSIHHARVLIRQ 404
             LR   ++G                 ENF   L +RL  +V++ G+A++   AR L+  
Sbjct: 76  GKLR--GKHG-----------------ENFMILLEQRLDNIVYRLGLARTRRAARQLVNH 116

Query: 405 RHIRVGRQIVNVPSFMVRV 461
            HI V  + V++PS+ V V
Sbjct: 117 GHITVDGKRVDIPSYQVSV 135

---

>RR4_TRIRO (P69654) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 42.7 bits (99), Expect = 5e-04
 Identities = 27/90 (30%), Positives = 43/90 (47%)
 Frame = +3

Query: 180 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 359
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 360 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
           GMA +I  AR L+  RHI V  +IV++PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVDIPSF 128

---

>RR4_TRIDA (P69653) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 42.7 bits (99), Expect = 5e-04
 Identities = 27/90 (30%), Positives = 43/90 (47%)
 Frame = +3

Query: 180 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 359
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 360 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
           GMA +I  AR L+  RHI V  +IV++PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVDIPSF 128

---

>RR4_SETVI (P69650) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 42.7 bits (99), Expect = 5e-04
 Identities = 27/90 (30%), Positives = 43/90 (47%)
 Frame = +3

Query: 180 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 359
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 360 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
           GMA +I  AR L+  RHI V  +IV++PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVDIPSF 128

---

>RR4_PILTE (O20278) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 195

 Score = 42.7 bits (99), Expect = 5e-04
 Identities = 25/91 (27%), Positives = 45/91 (49%)
 Frame = +3

Query: 177 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 356
           +++ + L+EK   R   G    + +    +  + +     +L       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQILL----QLLEMRLDNILFR 90

Query: 357 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

---

>RR4_PHYFL (P69649) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 42.7 bits (99), Expect = 5e-04
 Identities = 27/90 (30%), Positives = 43/90 (47%)
 Frame = +3

Query: 180 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 359
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 360 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
           GMA +I  AR L+  RHI V  +IV++PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVDIPSF 128

---

>RR4_PENVI (P36467) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 42.7 bits (99), Expect = 5e-04
 Identities = 27/90 (30%), Positives = 43/90 (47%)
 Frame = +3

Query: 180 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 359
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 360 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
           GMA +I  AR L+  RHI V  +IV++PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVDIPSF 128

---

>RR4_NAROD (O47029) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 42.7 bits (99), Expect = 5e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = +3

Query: 177 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 356
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 42  SQYRIRLEEKQKLRFHYGLTERQLLRYVHIARKAKGSTGQVLL----QLLEMRLDNILFR 97

Query: 357 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 98  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 128

---

>RR4_GLAMU (O20219) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 195

 Score = 42.7 bits (99), Expect = 5e-04
 Identities = 25/91 (27%), Positives = 45/91 (49%)
 Frame = +3

Query: 177 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 356
           +++ + L+EK   R   G    + +    +  + +     +L       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQILL----QLLEMRLDNILFR 90

Query: 357 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

---

>RR4_ARUJA (P69634) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 42.7 bits (99), Expect = 5e-04
 Identities = 27/90 (30%), Positives = 43/90 (47%)
 Frame = +3

Query: 180 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 359
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 360 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
           GMA +I  AR L+  RHI V  +IV++PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVDIPSF 128

---

>RR4_ANDIS (P69631) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 42.7 bits (99), Expect = 5e-04
 Identities = 27/90 (30%), Positives = 43/90 (47%)
 Frame = +3

Query: 180 RHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKA 359
           ++ + L EK   R   G    + +    +  + +     VL       L  RL  ++F+ 
Sbjct: 43  QYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKRSTGQVLL----QLLEMRLDNILFRL 98

Query: 360 GMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
           GMA +I  AR L+  RHI V  +IV++PSF
Sbjct: 99  GMASTIPGARQLVNHRHILVNGRIVDIPSF 128

---

>RR4_TRISA (O20291) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 194

 Score = 42.7 bits (99), Expect = 5e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = +3

Query: 177 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 356
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGRVLL----QLLEMRLDNILFR 90

Query: 357 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

---

>RR4_FURGI (O20213) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 194

 Score = 42.7 bits (99), Expect = 5e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = +3

Query: 177 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 356
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLRYVHIAGKAKGSTGQVLL----QLLEMRLDNILFR 90

Query: 357 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVTHRHILVNGRIVDIPSY 121

---

>RR4_BOBGL (O19992) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 194

 Score = 42.7 bits (99), Expect = 5e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = +3

Query: 177 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 356
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQVLL----QLLEMRLDNILFR 90

Query: 357 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVTHRHILVNGRIVDIPSY 121

---

>RR4_PINKO (Q85WX8) Chloroplast 30S ribosomal protein S4|
          Length = 228

 Score = 42.4 bits (98), Expect = 7e-04
 Identities = 27/97 (27%), Positives = 45/97 (46%)
 Frame = +3

Query: 159 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 338
           S  R  +++ + L+EK   R   G    + +    +    +     VL       L  RL
Sbjct: 38  SSSRKISQYRIRLEEKQKLRFHYGLTERQLLKYVRVSRRAKGSTGQVLL----QLLEMRL 93

Query: 339 QTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
             ++F+ GMA +I  AR L+   HIRV   +V++PS+
Sbjct: 94  DNIIFRLGMAPTIPGARQLVNHGHIRVNDHMVDIPSY 130

---

>RS4_STAS1 (Q49YF2) 30S ribosomal protein S4|
          Length = 200

 Score = 42.4 bits (98), Expect = 7e-04
 Identities = 34/123 (27%), Positives = 61/123 (49%), Gaps = 1/123 (0%)
 Frame = +3

Query: 105 GEYGLRCKRELWRVQYALS-RIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQ 281
           G++G   +++L   +YAL  R +   R+L  + E+  R  FE A      N++G+  E  
Sbjct: 34  GQHGPNQRKKL--SEYALQLREKQKLRYLYGMTERQFRNTFEIAG-----NQHGVHGENF 86

Query: 282 DKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRV 461
            +L           LA RL  +V+  G+A++   AR ++   HI V  + V++PS+ ++ 
Sbjct: 87  MQL-----------LAARLDAVVYSLGLARTRRQARQIVNHGHIEVDGKRVDIPSYTLKP 135

Query: 462 ESE 470
             E
Sbjct: 136 GQE 138

---

>RS4_STAAW (P66564) 30S ribosomal protein S4|
          Length = 200

 Score = 42.4 bits (98), Expect = 7e-04
 Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 21/93 (22%)
 Frame = +3

Query: 243 RRMNRYGLLAEGQDKLDYVLALT------------------AENF---LARRLQTLVFKA 359
           ++++ YGL    + KL Y+  +T                   ENF   LA RL  +V+  
Sbjct: 42  KKLSEYGLQLREKQKLRYLYGMTERQFRNTFDIAGKKFGVHGENFMILLASRLDAVVYSL 101

Query: 360 GMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVR 458
           G+A++   AR L+   HI V  + V++PS+ V+
Sbjct: 102 GLARTRRQARQLVNHGHILVDGKRVDIPSYSVK 134

---

>RS4_STAAS (Q6G8K8) 30S ribosomal protein S4|
          Length = 200

 Score = 42.4 bits (98), Expect = 7e-04
 Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 21/93 (22%)
 Frame = +3

Query: 243 RRMNRYGLLAEGQDKLDYVLALT------------------AENF---LARRLQTLVFKA 359
           ++++ YGL    + KL Y+  +T                   ENF   LA RL  +V+  
Sbjct: 42  KKLSEYGLQLREKQKLRYLYGMTERQFRNTFDIAGKKFGVHGENFMILLASRLDAVVYSL 101

Query: 360 GMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVR 458
           G+A++   AR L+   HI V  + V++PS+ V+
Sbjct: 102 GLARTRRQARQLVNHGHILVDGKRVDIPSYSVK 134

---

>RS4_STAAR (Q6GFY8) 30S ribosomal protein S4|
          Length = 200

 Score = 42.4 bits (98), Expect = 7e-04
 Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 21/93 (22%)
 Frame = +3

Query: 243 RRMNRYGLLAEGQDKLDYVLALT------------------AENF---LARRLQTLVFKA 359
           ++++ YGL    + KL Y+  +T                   ENF   LA RL  +V+  
Sbjct: 42  KKLSEYGLQLREKQKLRYLYGMTERQFRNTFDIAGKKFGVHGENFMILLASRLDAVVYSL 101

Query: 360 GMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVR 458
           G+A++   AR L+   HI V  + V++PS+ V+
Sbjct: 102 GLARTRRQARQLVNHGHILVDGKRVDIPSYSVK 134

---

>RS4_STAAN (P66563) 30S ribosomal protein S4|
          Length = 200

 Score = 42.4 bits (98), Expect = 7e-04
 Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 21/93 (22%)
 Frame = +3

Query: 243 RRMNRYGLLAEGQDKLDYVLALT------------------AENF---LARRLQTLVFKA 359
           ++++ YGL    + KL Y+  +T                   ENF   LA RL  +V+  
Sbjct: 42  KKLSEYGLQLREKQKLRYLYGMTERQFRNTFDIAGKKFGVHGENFMILLASRLDAVVYSL 101

Query: 360 GMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVR 458
           G+A++   AR L+   HI V  + V++PS+ V+
Sbjct: 102 GLARTRRQARQLVNHGHILVDGKRVDIPSYSVK 134

---

>RS4_STAAM (P66562) 30S ribosomal protein S4|
          Length = 200

 Score = 42.4 bits (98), Expect = 7e-04
 Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 21/93 (22%)
 Frame = +3

Query: 243 RRMNRYGLLAEGQDKLDYVLALT------------------AENF---LARRLQTLVFKA 359
           ++++ YGL    + KL Y+  +T                   ENF   LA RL  +V+  
Sbjct: 42  KKLSEYGLQLREKQKLRYLYGMTERQFRNTFDIAGKKFGVHGENFMILLASRLDAVVYSL 101

Query: 360 GMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVR 458
           G+A++   AR L+   HI V  + V++PS+ V+
Sbjct: 102 GLARTRRQARQLVNHGHILVDGKRVDIPSYSVK 134

---

>RS4_STAAC (Q5HF54) 30S ribosomal protein S4|
          Length = 200

 Score = 42.4 bits (98), Expect = 7e-04
 Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 21/93 (22%)
 Frame = +3

Query: 243 RRMNRYGLLAEGQDKLDYVLALT------------------AENF---LARRLQTLVFKA 359
           ++++ YGL    + KL Y+  +T                   ENF   LA RL  +V+  
Sbjct: 42  KKLSEYGLQLREKQKLRYLYGMTERQFRNTFDIAGKKFGVHGENFMILLASRLDAVVYSL 101

Query: 360 GMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVR 458
           G+A++   AR L+   HI V  + V++PS+ V+
Sbjct: 102 GLARTRRQARQLVNHGHILVDGKRVDIPSYSVK 134

---

>RS4_STAAB (Q2YTH0) 30S ribosomal protein S4|
          Length = 200

 Score = 42.4 bits (98), Expect = 7e-04
 Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 21/93 (22%)
 Frame = +3

Query: 243 RRMNRYGLLAEGQDKLDYVLALT------------------AENF---LARRLQTLVFKA 359
           ++++ YGL    + KL Y+  +T                   ENF   LA RL  +V+  
Sbjct: 42  KKLSEYGLQLREKQKLRYLYGMTERQFRNTFDIAGKKFGVHGENFMILLASRLDAVVYSL 101

Query: 360 GMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVR 458
           G+A++   AR L+   HI V  + V++PS+ V+
Sbjct: 102 GLARTRRQARQLVNHGHILVDGKRVDIPSYSVK 134

---

>RS4_GEOKA (Q5KW49) 30S ribosomal protein S4|
          Length = 200

 Score = 42.4 bits (98), Expect = 7e-04
 Identities = 36/138 (26%), Positives = 61/138 (44%), Gaps = 4/138 (2%)
 Frame = +3

Query: 57  RRPYEK-ERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRRIFEGA 233
           +RPY   +    + + + EYGL+ +             +   RH+  ++E+  R+ FE A
Sbjct: 28  KRPYPPGQHGPGQRRKLSEYGLQLQE------------KQKLRHMYGVNERQFRKTFEEA 75

Query: 234 ALLRRMNRYGLLAEGQDKLDYVLALTAENF---LARRLQTLVFKAGMAKSIHHARVLIRQ 404
              +   ++G                 ENF   L  RL  LV++ G+A++   AR L+  
Sbjct: 76  G--KMPGKHG-----------------ENFMILLESRLDNLVYRLGLARTRRQARQLVTH 116

Query: 405 RHIRVGRQIVNVPSFMVR 458
            HI V    VN+PS+ V+
Sbjct: 117 GHILVDGSRVNIPSYRVK 134

---

>RR4_HYPLA (P59145) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 42.4 bits (98), Expect = 7e-04
 Identities = 25/94 (26%), Positives = 45/94 (47%)
 Frame = +3

Query: 168 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 347
           +  +++ + L+EK   R   G    + +N   +  + +     +L       L  RL  +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGEILL----QLLEMRLDNV 95

Query: 348 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
           +F+ GM  +I  AR L+  RHI V   IV++PS+
Sbjct: 96  IFRLGMTPTIPGARQLVNHRHILVNGYIVDIPSY 129

---

>RR4_HYPDI (P59143) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 42.4 bits (98), Expect = 7e-04
 Identities = 25/94 (26%), Positives = 45/94 (47%)
 Frame = +3

Query: 168 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 347
           +  +++ + L+EK   R   G    + +N   +  + +     +L       L  RL  +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGEILL----QLLEMRLDNV 95

Query: 348 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
           +F+ GM  +I  AR L+  RHI V   IV++PS+
Sbjct: 96  IFRLGMTPTIPGARQLVNHRHILVNGYIVDIPSY 129

---

>RR4_HYPCP (P59142) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 42.4 bits (98), Expect = 7e-04
 Identities = 27/94 (28%), Positives = 45/94 (47%)
 Frame = +3

Query: 168 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 347
           +  +++ + L+EK   R   G    + +N   +  + +     VL       L  RL  +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGEVLL----QLLEMRLDNV 95

Query: 348 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
            F+ GMA +I  AR L+  RHI V   IV++PS+
Sbjct: 96  TFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSY 129

---

>RR4_CYABU (P59138) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 42.4 bits (98), Expect = 7e-04
 Identities = 26/97 (26%), Positives = 46/97 (47%)
 Frame = +3

Query: 168 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 347
           +  +++ + L+EK   R   G    + +N   +  + +     VL       L  RL  +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGEVLL----QLLEMRLDNV 95

Query: 348 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVR 458
           +F+ GM  +I  AR L+  RHI V   IV++PS+  +
Sbjct: 96  IFRLGMFPTIPGARQLVNHRHILVNGPIVDIPSYQCK 132

---

>RR4_BELCH (O19990) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 182

 Score = 42.4 bits (98), Expect = 7e-04
 Identities = 26/91 (28%), Positives = 44/91 (48%)
 Frame = +3

Query: 177 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 356
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGRVLL----QLLEMRLDNILFR 90

Query: 357 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
            GMA +I  AR L+  RHI V   IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGHIVDIPSY 121

---

>RR4_EQUVA (Q6H9K2) Chloroplast 30S ribosomal protein S4|
          Length = 207

 Score = 42.4 bits (98), Expect = 7e-04
 Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 21/93 (22%)
 Frame = +3

Query: 234 ALLRRMNRYGLLAEGQDKLDYVLALTAENFL---------------------ARRLQTLV 350
           ++ +++++YG+  E + +L +   LT    L                       RL  ++
Sbjct: 39  SIQKKVSQYGIRLEAKQRLRFNYGLTERQLLNYVRIARCAKGSTGQILLQLLEMRLDNIL 98

Query: 351 FKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
           F+ G   +I  AR LI  RHI V  +IV+VPSF
Sbjct: 99  FRLGFVPTIPSARQLINHRHILVNNRIVDVPSF 131

---

>RR4_EQULA (Q6H9L0) Chloroplast 30S ribosomal protein S4|
          Length = 207

 Score = 42.4 bits (98), Expect = 7e-04
 Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 21/93 (22%)
 Frame = +3

Query: 234 ALLRRMNRYGLLAEGQDKLDYVLALTAENFL---------------------ARRLQTLV 350
           ++ +++++YG+  E + +L +   LT    L                       RL  ++
Sbjct: 39  SIQKKVSQYGIRLEAKQRLRFNYGLTERQLLNYVRIARGAKGSTGQILLQLLEMRLDNIL 98

Query: 351 FKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
           F+ G   +I  AR LI  RHI V  +IV+VPSF
Sbjct: 99  FRLGFVPTIPSARQLINHRHILVNNRIVDVPSF 131

---

>RR4_EQUHY (Q6H9L1) Chloroplast 30S ribosomal protein S4|
          Length = 207

 Score = 42.4 bits (98), Expect = 7e-04
 Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 21/93 (22%)
 Frame = +3

Query: 234 ALLRRMNRYGLLAEGQDKLDYVLALTAENFL---------------------ARRLQTLV 350
           ++ +++++YG+  E + +L +   LT    L                       RL  ++
Sbjct: 39  SIQKKVSQYGIRLEAKQRLRFNYGLTERQLLNYVRIARCAKGSTGQILLQLLEMRLDNIL 98

Query: 351 FKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
           F+ G   +I  AR LI  RHI V  +IV+VPSF
Sbjct: 99  FRLGFVPTIPSARQLINHRHILVNNRIVDVPSF 131

---

>RR4_EQUGI (Q6H9L2) Chloroplast 30S ribosomal protein S4|
          Length = 207

 Score = 42.4 bits (98), Expect = 7e-04
 Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 21/93 (22%)
 Frame = +3

Query: 234 ALLRRMNRYGLLAEGQDKLDYVLALTAENFL---------------------ARRLQTLV 350
           ++ +++++YG+  E + +L +   LT    L                       RL  ++
Sbjct: 39  SIQKKVSQYGIRLEAKQRLRFNYGLTERQLLNYVRIARCAKGSTGQILLQLLEMRLDNIL 98

Query: 351 FKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
           F+ G   +I  AR LI  RHI V  +IV+VPSF
Sbjct: 99  FRLGFVPTIPSARQLINHRHILVNNRIVDVPSF 131

---

>RS4_SYNY3 (P48939) 30S ribosomal protein S4|
          Length = 202

 Score = 42.0 bits (97), Expect = 9e-04
 Identities = 34/123 (27%), Positives = 50/123 (40%), Gaps = 24/123 (19%)
 Frame = +3

Query: 162 RIRNAARHLLTLDEKNPRRIF---EGAALLRRMNRYGLLAEGQDKLDYVLALTAENF--- 323
           RI      L  L  K+PRR +   +     R+ + Y +  E + KL     +T +     
Sbjct: 10  RIVRRLGELPGLSRKSPRRAYPPGQHGQARRKRSEYAIRLEEKQKLRLNYGITEKQLVRY 69

Query: 324 ------------------LARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
                             L  RL   VF+ GMA +I  AR L+   HI V  Q+V++PS+
Sbjct: 70  VKKARRATGSTGQALLELLEMRLDNTVFRLGMAGTIPGARQLVCHGHITVNGQVVDIPSY 129

Query: 450 MVR 458
             R
Sbjct: 130 QCR 132

---

>RR4_RICNA (Q9M4C2) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 42.0 bits (97), Expect = 9e-04
 Identities = 24/94 (25%), Positives = 44/94 (46%)
 Frame = +3

Query: 168 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 347
           +  +++ + L+EK   R   G    + +    +  + +     VL       L  RL  +
Sbjct: 40  KKVSQYRIRLEEKQKLRFHYGLTERQLLKYVRIARKAKGSTGQVLL----QLLEMRLDNI 95

Query: 348 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
           +F+ GMA +I  AR L+  RHI +    V++PS+
Sbjct: 96  IFRLGMAPTIPGARQLVNHRHILINNSTVDIPSY 129

---

>RR4_PLAAD (Q9FSE4) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 42.0 bits (97), Expect = 9e-04
 Identities = 23/94 (24%), Positives = 45/94 (47%)
 Frame = +3

Query: 168 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 347
           +  +++ + L+EK   R   G A  + +    +  + +     +L       L  RL   
Sbjct: 40  KKVSQYRIRLEEKQKLRSHYGLAERQLLKYMRIARKAKGSTGQILL----QLLEMRLDNT 95

Query: 348 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
           +F+ GM+ +I  AR L+  RHI +   +V++PS+
Sbjct: 96  IFRLGMSPTIPGARQLVNHRHISINNDVVDIPSY 129

---

>RR4_MARPO (P06358) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 42.0 bits (97), Expect = 9e-04
 Identities = 24/94 (25%), Positives = 44/94 (46%)
 Frame = +3

Query: 168 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 347
           +  +++ + L+EK   R   G    + +    +  + +     VL       L  RL  +
Sbjct: 40  KKVSQYRIRLEEKQKLRFHYGLTERQLLKYVRIARKAKGSTGQVLL----QLLEMRLDNI 95

Query: 348 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
           +F+ GMA +I  AR L+  RHI +    V++PS+
Sbjct: 96  IFRLGMAPTIPGARQLVNHRHILINNNTVDIPSY 129

---

>RR4_EPIVI (P30056) Plastid 30S ribosomal protein S4|
          Length = 202

 Score = 42.0 bits (97), Expect = 9e-04
 Identities = 25/91 (27%), Positives = 45/91 (49%)
 Frame = +3

Query: 177 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 356
           +++ + L+EK   R   G    +    + +  + +     VL       L  RL  ++F+
Sbjct: 42  SQYRIRLEEKQKLRFNYGLRERQLRKYFSIAIKTRGSTGKVLM----QLLEMRLDNIIFR 97

Query: 357 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
            GMA +I  AR L+  RH+ V  +IV++PS+
Sbjct: 98  LGMASTIPAARQLVNHRHVLVNGRIVDIPSY 128

---

>RR4_PATFR (O20273) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 184

 Score = 42.0 bits (97), Expect = 9e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = +3

Query: 177 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 356
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKVKGSTGQVLL----QLLEMRLDNILFR 90

Query: 357 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

---

>RS4_LEIXX (Q6AFA4) 30S ribosomal protein S4|
          Length = 207

 Score = 42.0 bits (97), Expect = 9e-04
 Identities = 24/54 (44%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
 Frame = +3

Query: 306 LTAENF---LARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVR 458
           LT EN    L  RL  LV +AG A++I  AR  +  RHI V  ++V+ PSF V+
Sbjct: 82  LTGENLVEILEMRLDALVLRAGFARTISQARQFVVHRHILVDGKLVDRPSFRVK 135

---

>RS4_PELLD (Q3B6D7) 30S ribosomal protein S4|
          Length = 203

 Score = 42.0 bits (97), Expect = 9e-04
 Identities = 33/106 (31%), Positives = 49/106 (46%), Gaps = 3/106 (2%)
 Frame = +3

Query: 147 QYALSRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENF- 323
           Q+   R    + + L L EK   +   G  L ++   Y   A  Q        +T +N  
Sbjct: 36  QHGQGRRGKISEYALQLREKQKMKYLYGI-LEKQFRNYYKKAVSQR------GVTGDNLV 88

Query: 324 --LARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMV 455
             + RRL  +VF+AG A S   AR L+   H+ V  + VN+PSF+V
Sbjct: 89  KLIERRLDNVVFRAGFAPSRAGARQLVSHSHLLVNGRKVNIPSFLV 134

---

>RS4_THET8 (P80373) 30S ribosomal protein S4|
          Length = 208

 Score = 42.0 bits (97), Expect = 9e-04
 Identities = 41/136 (30%), Positives = 58/136 (42%), Gaps = 5/136 (3%)
 Frame = +3

Query: 78  RLDAELKLVGE--YGLRC---KRELWRVQYALSRIRNAARHLLTLDEKNPRRIFEGAALL 242
           R   +L L GE  Y  +C   +R     Q+   R R  + + + L EK   R   G +  
Sbjct: 13  REGVKLYLKGERCYSPKCAMERRPYPPGQHGQKRARRPSDYAVRLREKQKLRRIYGISER 72

Query: 243 RRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVG 422
           +  N    L E   K   V        L  RL  +V++ G A S   AR L+R  HI V 
Sbjct: 73  QFRN----LFEEASKKKGVTGSVFLGLLESRLDNVVYRLGFAVSRRQARQLVRHGHITVN 128

Query: 423 RQIVNVPSFMVRVESE 470
            + V++PS+ VR   E
Sbjct: 129 GRRVDLPSYRVRPGDE 144

---

>RS4_THET2 (P62664) 30S ribosomal protein S4|
          Length = 208

 Score = 42.0 bits (97), Expect = 9e-04
 Identities = 41/136 (30%), Positives = 58/136 (42%), Gaps = 5/136 (3%)
 Frame = +3

Query: 78  RLDAELKLVGE--YGLRC---KRELWRVQYALSRIRNAARHLLTLDEKNPRRIFEGAALL 242
           R   +L L GE  Y  +C   +R     Q+   R R  + + + L EK   R   G +  
Sbjct: 13  REGVKLYLKGERCYSPKCAMERRPYPPGQHGQKRARRPSDYAVRLREKQKLRRIYGISER 72

Query: 243 RRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVG 422
           +  N    L E   K   V        L  RL  +V++ G A S   AR L+R  HI V 
Sbjct: 73  QFRN----LFEEASKKKGVTGSVFLGLLESRLDNVVYRLGFAVSRRQARQLVRHGHITVN 128

Query: 423 RQIVNVPSFMVRVESE 470
            + V++PS+ VR   E
Sbjct: 129 GRRVDLPSYRVRPGDE 144

---

>RS4_STRAW (Q827S7) 30S ribosomal protein S4|
          Length = 204

 Score = 42.0 bits (97), Expect = 9e-04
 Identities = 25/67 (37%), Positives = 37/67 (55%)
 Frame = +3

Query: 258 YGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVN 437
           Y   A+ Q K    L +  E    RRL  LV ++G+A++I+ AR ++   HI V  Q V+
Sbjct: 72  YERAAKTQGKTGEALVIELE----RRLDALVLRSGIARTIYQARQMVVHGHIEVNGQKVD 127

Query: 438 VPSFMVR 458
            PSF V+
Sbjct: 128 KPSFRVK 134

---

>RS4_BACST (P81288) 30S ribosomal protein S4 (BS5)|
          Length = 199

 Score = 42.0 bits (97), Expect = 9e-04
 Identities = 36/138 (26%), Positives = 61/138 (44%), Gaps = 4/138 (2%)
 Frame = +3

Query: 57  RRPYEK-ERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRRIFEGA 233
           +RPY   +    + + + EYGL+ +             +   RH+  ++E+  R+ FE A
Sbjct: 27  KRPYPPGQHGPGQRRKLSEYGLQLQE------------KQKLRHMYGVNERQFRKTFEEA 74

Query: 234 ALLRRMNRYGLLAEGQDKLDYVLALTAENF---LARRLQTLVFKAGMAKSIHHARVLIRQ 404
              +   ++G                 ENF   L  RL  LV++ G+A++   AR L+  
Sbjct: 75  G--KMPGKHG-----------------ENFMILLESRLDNLVYRLGLARTRRQARQLVTH 115

Query: 405 RHIRVGRQIVNVPSFMVR 458
            HI V    VN+PS+ V+
Sbjct: 116 GHIIVDGSRVNIPSYRVK 133

---

>RR4_PELNE (Q9FSD9) Chloroplast 30S ribosomal protein S4|
          Length = 200

 Score = 42.0 bits (97), Expect = 9e-04
 Identities = 23/94 (24%), Positives = 46/94 (48%)
 Frame = +3

Query: 168 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 347
           +  +++ + L+EK   R   G    + +    +  + +     +L+ T E     RL  +
Sbjct: 40  KKVSQYRIRLEEKQKLRFHYGLTERQLLKYVRIARKAKGSTGQILSQTLE----MRLDNI 95

Query: 348 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
           +F+ GM+ +I  AR L+  RHI +    V++PS+
Sbjct: 96  IFRLGMSPTIPGARQLVNHRHILINDNTVDIPSY 129

---

>RS4_LEGPL (Q5WZI8) 30S ribosomal protein S4|
          Length = 206

 Score = 42.0 bits (97), Expect = 9e-04
 Identities = 38/132 (28%), Positives = 63/132 (47%), Gaps = 4/132 (3%)
 Frame = +3

Query: 72  KERLDAELKL-VGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRRIFEGAALLRR 248
           +E  D  LK  V ++  +CK E    Q+   + R  +  +   +++  RR++    L ++
Sbjct: 14  REGCDLLLKSGVRDHKSKCKSEKLPGQHGDKKPRLNSYGIQLREKQKIRRLY--GILEKQ 71

Query: 249 MNRYGLLAEGQDKLDYVLALTAENFLA---RRLQTLVFKAGMAKSIHHARVLIRQRHIRV 419
              Y   A  Q         T EN +A   RRL  +V++ G A +   AR L+  + I V
Sbjct: 72  FRNYYKKAARQK------GSTGENLMALLERRLDNVVYRMGFASTRAEARQLVAHKAILV 125

Query: 420 GRQIVNVPSFMV 455
             ++VNVPSF+V
Sbjct: 126 NDKVVNVPSFLV 137

---

>RS4_LEGPH (Q5ZYL9) 30S ribosomal protein S4|
          Length = 206

 Score = 42.0 bits (97), Expect = 9e-04
 Identities = 38/132 (28%), Positives = 63/132 (47%), Gaps = 4/132 (3%)
 Frame = +3

Query: 72  KERLDAELKL-VGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRRIFEGAALLRR 248
           +E  D  LK  V ++  +CK E    Q+   + R  +  +   +++  RR++    L ++
Sbjct: 14  REGCDLLLKSGVRDHKSKCKSEKLPGQHGDKKPRLNSYGIQLREKQKIRRLY--GILEKQ 71

Query: 249 MNRYGLLAEGQDKLDYVLALTAENFLA---RRLQTLVFKAGMAKSIHHARVLIRQRHIRV 419
              Y   A  Q         T EN +A   RRL  +V++ G A +   AR L+  + I V
Sbjct: 72  FRNYYKKAARQK------GSTGENLMALLERRLDNVVYRMGFASTRAEARQLVAHKAILV 125

Query: 420 GRQIVNVPSFMV 455
             ++VNVPSF+V
Sbjct: 126 NDKVVNVPSFLV 137

---

>RS4_LEGPA (Q5X835) 30S ribosomal protein S4|
          Length = 206

 Score = 42.0 bits (97), Expect = 9e-04
 Identities = 38/132 (28%), Positives = 63/132 (47%), Gaps = 4/132 (3%)
 Frame = +3

Query: 72  KERLDAELKL-VGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRRIFEGAALLRR 248
           +E  D  LK  V ++  +CK E    Q+   + R  +  +   +++  RR++    L ++
Sbjct: 14  REGCDLLLKSGVRDHKSKCKSEKLPGQHGDKKPRLNSYGIQLREKQKIRRLY--GILEKQ 71

Query: 249 MNRYGLLAEGQDKLDYVLALTAENFLA---RRLQTLVFKAGMAKSIHHARVLIRQRHIRV 419
              Y   A  Q         T EN +A   RRL  +V++ G A +   AR L+  + I V
Sbjct: 72  FRNYYKKAARQK------GSTGENLMALLERRLDNVVYRMGFASTRAEARQLVAHKAILV 125

Query: 420 GRQIVNVPSFMV 455
             ++VNVPSF+V
Sbjct: 126 NDKVVNVPSFLV 137

---

>RR4_PATSQ (O36052) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 196

 Score = 42.0 bits (97), Expect = 9e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%)
 Frame = +3

Query: 177 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 356
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKVKGSTGQVLL----QLLEMRLDNILFR 90

Query: 357 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
            GMA +I  AR L+  RHI V  +IV++PS+
Sbjct: 91  LGMASTIPGARQLVNHRHILVNGRIVDIPSY 121

---

>RR4_MORST (O20264) Chloroplast 30S ribosomal protein S4 (Fragment)|
          Length = 194

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 25/91 (27%), Positives = 45/91 (49%)
 Frame = +3

Query: 177 ARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFK 356
           +++ + L+EK   R   G    + +    +  + +     VL       L  RL  ++F+
Sbjct: 35  SQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQVLL----QLLEMRLDNILFR 90

Query: 357 AGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
            GMA +I  AR L+  RHI V  +I+++PS+
Sbjct: 91  LGMASTIPGARQLVTHRHILVNGRIMDIPSY 121

---

>RS4_LACJO (Q74K05) 30S ribosomal protein S4|
          Length = 203

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 23/72 (31%), Positives = 40/72 (55%)
 Frame = +3

Query: 255 RYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIV 434
           R G + EG+  ++++        L RRL  +V++ G+A +   AR L+   HI V  + V
Sbjct: 74  RAGKIREGKHGVNFMA------LLERRLDNIVYRLGLASTREQARQLVNHGHILVDGKRV 127

Query: 435 NVPSFMVRVESE 470
           ++PS+ V+V  E
Sbjct: 128 DIPSYEVKVGQE 139

---

>RS4_GEOSL (Q749B2) 30S ribosomal protein S4|
          Length = 208

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
 Frame = +3

Query: 291 DYVLALTAENFLA---RRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVR 458
           D +  +T EN L+   RRL  +V++ G A S   AR+L+R  H  +  +  N+PS  +R
Sbjct: 82  DRLKGVTGENLLSLLERRLDNVVYRLGFAASRTEARILVRHNHFTLNGKKANIPSIQLR 140

---

>RS4_GEOMG (Q39XY0) 30S ribosomal protein S4|
          Length = 208

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
 Frame = +3

Query: 282 DKLDYVLALTAENFLA---RRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFM 452
           ++ D +  +T EN L+   RRL  +V++ G A S   AR+L+R  H  +  +  N+PS  
Sbjct: 79  EEADRMRGVTGENLLSLLERRLDNVVYRLGFASSRTEARILVRHNHFTLNGRKANIPSIQ 138

Query: 453 VR 458
           ++
Sbjct: 139 LK 140

---

>RS4_ENTFA (Q82ZI6) 30S ribosomal protein S4|
          Length = 203

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 33/136 (24%), Positives = 64/136 (47%), Gaps = 1/136 (0%)
 Frame = +3

Query: 57  RRPYEKERLDAELK-LVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRRIFEGA 233
           RRPY+  +     +  V EYG++               +   RH+  ++E+  R +F  A
Sbjct: 28  RRPYKPGQHGPNSRGKVSEYGMQLTE------------KQKLRHMYGMNERQFRTLFIKA 75

Query: 234 ALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHI 413
           + ++         EG+  +++++       L +RL  +V++ G+A +   AR L+   HI
Sbjct: 76  SKIK---------EGKHGVNFMV------LLEQRLDNVVYRLGLATTRRQARQLVNHGHI 120

Query: 414 RVGRQIVNVPSFMVRV 461
            V  + V++PS+ V V
Sbjct: 121 TVDGKRVDIPSYHVEV 136

---

>RS4_CORGL (Q8NSV4) 30S ribosomal protein S4|
          Length = 201

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 3/106 (2%)
 Frame = +3

Query: 147 QYALSRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENF- 323
           Q   +RI+ +  +LL L EK   R   G  + ++  RY   AE   +       T EN  
Sbjct: 35  QAGRARIKES-EYLLQLQEKQKARFIYGV-MEKQFRRY--YAEANRRA----GKTGENLV 86

Query: 324 --LARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMV 455
             L  RL  +V++AG+A +   AR L+   H  V  + ++VPSF V
Sbjct: 87  VLLESRLDNVVYRAGLANTRRQARQLVSHGHFTVNGKAIDVPSFRV 132

---

>RS4_COREF (Q8FS34) 30S ribosomal protein S4|
          Length = 201

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 3/106 (2%)
 Frame = +3

Query: 147 QYALSRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENF- 323
           Q   +RI+ +  +LL L EK   R   G  + ++  RY   A  +         T EN  
Sbjct: 35  QAGRARIKES-EYLLQLQEKQKARFIYGV-MEKQFRRYYAEANRRP------GKTGENLV 86

Query: 324 --LARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMV 455
             L  RL  +V++AG+A++   AR L+   H  V  + V+VPSF V
Sbjct: 87  VMLESRLDNVVYRAGLARTRRQARQLVSHGHFVVNGKAVDVPSFRV 132

---

>RS4_CORAM (Q3S664) 30S ribosomal protein S4|
          Length = 201

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 3/106 (2%)
 Frame = +3

Query: 147 QYALSRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENF- 323
           Q   +RI+ +  +LL L EK   +   G  L R+  RY + A  Q         T +N  
Sbjct: 35  QAGRNRIKES-EYLLQLQEKQKAKYTYGV-LERQFRRYYVEANRQP------GKTGDNLV 86

Query: 324 --LARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMV 455
             L  RL  +V++AG+A++   AR L+   H  V  +  NVPS+ V
Sbjct: 87  VLLETRLDNVVYRAGLARTRRQARQLVSHGHFTVNGKKTNVPSYRV 132

---

>RR4_ZYGCR (Q32RL5) Chloroplast 30S ribosomal protein S4|
          Length = 199

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 1/113 (0%)
 Frame = +3

Query: 114 GLRCKRELWRVQYALS-RIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKL 290
           GL  KR     Q  L  + +  +++ + L+EK   R   G    R++ RY  +A    K 
Sbjct: 20  GLTTKRRKLTEQNKLQDKKQKKSQYRIRLEEKQKLRFHYGLTE-RQLLRYIRIAR---KA 75

Query: 291 DYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
                 T    L  RL   +F+ GMA +I  AR L+   HI +  ++V++PS+
Sbjct: 76  KGSTGQTLLQLLEMRLDNTIFRLGMAATIRAARQLVNHGHIVLNERVVDIPSY 128

---

>RR4_NEPOL (Q9TKX5) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 3/97 (3%)
 Frame = +3

Query: 168 RNAARHLLTLDEKNPRRIFEGAA---LLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 338
           +  +++ + L+EK   R   G     LLR M R    A+G    + +        L  RL
Sbjct: 40  KKPSQYRIRLEEKQKLRYNYGVTEKQLLRYMQR-ARRAKGSSGENLL------QLLEMRL 92

Query: 339 QTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
            T +F+ GMA ++  AR LI   HI V  Q VN+PS+
Sbjct: 93  DTTIFRLGMAPTMLSARQLITHGHILVSEQRVNIPSY 129

---

>RR4_NECCR (P59149) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 26/94 (27%), Positives = 45/94 (47%)
 Frame = +3

Query: 168 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 347
           +  +++ + L+EK   R   G    + +N   +  + +     VL       L  R   +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGEVLL----QLLEMRSDNV 95

Query: 348 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
           +F+ GMA +I  AR L+  RHI V   IV++PS+
Sbjct: 96  IFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSY 129

---

>RR4_MONFO (Q9M4C1) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 23/94 (24%), Positives = 45/94 (47%)
 Frame = +3

Query: 168 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 347
           +  +++ + L+EK   R   G    + +    +  + +     VL       L  RL  +
Sbjct: 40  KKVSQYRIRLEEKQKLRFHYGLTERQLLKYVRIARKAKGSTGQVLL----QLLEMRLDNI 95

Query: 348 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
           +F+ GMA ++  AR L+  RHI +   +V++PS+
Sbjct: 96  LFRLGMALTVPGARQLVNHRHILINNSMVDIPSY 129

---

>RR4_ANTPU (Q9FTC7) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 26/94 (27%), Positives = 45/94 (47%)
 Frame = +3

Query: 168 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 347
           +  +++ + L+EK   R   G    + +N   +  + +     VL       L  R   +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGEVLL----QLLEMRSDNV 95

Query: 348 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
           +F+ GMA +I  AR L+  RHI V   IV++PS+
Sbjct: 96  IFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSY 129

---

>RS4_NITWN (Q3ST14) 30S ribosomal protein S4|
          Length = 205

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 8/76 (10%)
 Frame = +3

Query: 258 YGLLAEGQDKLDYVLAL-----TAENF---LARRLQTLVFKAGMAKSIHHARVLIRQRHI 413
           YG ++E Q    YV A      + EN    L RRL T+V++A    +I  AR  I   H+
Sbjct: 62  YGNISERQFYAIYVEATRMKGDSGENLIGLLERRLDTVVYRAKFVPTIFAARQFINHGHV 121

Query: 414 RVGRQIVNVPSFMVRV 461
           +V  + VN+PS+ ++V
Sbjct: 122 KVNGRRVNIPSYKLKV 137

---

>RR4_PANGI (Q68S04) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 27/97 (27%), Positives = 46/97 (47%)
 Frame = +3

Query: 159 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 338
           SR    +++ + L+EK   R   G    + +    +  + +     VL       L  RL
Sbjct: 36  SRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIAGKAKGSTGQVLL----QLLEMRL 91

Query: 339 QTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
             ++F+ GMA +I  AR L+  RHI V  +IV++ S+
Sbjct: 92  DNILFRLGMAPTIPGARQLVNHRHILVNGRIVDIASY 128

---

>RR4_ARATH (P56799) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 27/97 (27%), Positives = 46/97 (47%)
 Frame = +3

Query: 159 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 338
           SR    +++ + L+EK   R   G    + +    +  + +     VL       L  RL
Sbjct: 36  SRSVKKSQYRIRLEEKQKLRFHYGLTEHQLLKYVRIAGKAKGSTGQVLL----QLLEMRL 91

Query: 339 QTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
             ++F+ GMA +I  AR L+   HI V  +IV++PS+
Sbjct: 92  DNILFRLGMALTIPQARQLVNHGHILVNGRIVDIPSY 128

---

>RR4_ADICA (Q85FL8) Chloroplast 30S ribosomal protein S4|
          Length = 197

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 30/108 (27%), Positives = 47/108 (43%), Gaps = 11/108 (10%)
 Frame = +3

Query: 159 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNR----YGLLAEGQDKLDYVLALTAEN-- 320
           S   N     L +D+   R+I +    L    R    YGL      +   +   T  +  
Sbjct: 16  SNTSNLGEFRLAVDQSTSRKISQFCVRLEAKQRLRLNYGLTERQLLRYVRIARRTRGSTG 75

Query: 321 -----FLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
                 L  RL  ++F+ GMA +I  AR L+  RHI V  ++V++PS+
Sbjct: 76  QVLLQLLEMRLDNIIFQLGMASTIPAARQLVCHRHILVNHRVVDIPSY 123

---

>RS4_LISMF (Q71Z71) 30S ribosomal protein S4|
          Length = 200

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 21/99 (21%)
 Frame = +3

Query: 228 GAALLRRMNRYGLLAEGQDKLDYVLALT------------------AENF---LARRLQT 344
           G    ++++ YGL    + KL ++  LT                   ENF   L +RL  
Sbjct: 37  GPTQRKKISEYGLQQAEKQKLRHMYGLTERQFKNTFNKAGKLQGKHGENFMILLEQRLDN 96

Query: 345 LVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRV 461
           +V++ G+A++   AR L+   HI V  + V++PS+ V V
Sbjct: 97  IVYRLGLARTRRAARQLVNHGHITVDGKRVDIPSYQVSV 135

---

>RS4_LISIN (Q92BB2) 30S ribosomal protein S4|
          Length = 200

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 21/99 (21%)
 Frame = +3

Query: 228 GAALLRRMNRYGLLAEGQDKLDYVLALT------------------AENF---LARRLQT 344
           G    ++++ YGL    + KL ++  LT                   ENF   L +RL  
Sbjct: 37  GPTQRKKISEYGLQQAEKQKLRHMYGLTERQFKNTFNKAGKLQGKHGENFMILLEQRLDN 96

Query: 345 LVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRV 461
           +V++ G+A++   AR L+   HI V  + V++PS+ V V
Sbjct: 97  IVYRLGLARTRRAARQLVNHGHITVDGKRVDIPSYQVSV 135

---

>RS4_BACSU (P21466) 30S ribosomal protein S4 (BS4)|
          Length = 199

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 33/135 (24%), Positives = 62/135 (45%), Gaps = 1/135 (0%)
 Frame = +3

Query: 57  RRPYEK-ERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRRIFEGA 233
           +RPY        + K + EYGL+ +             +   RH+  ++E+  R +F+ A
Sbjct: 27  KRPYAPGPHGPGQRKKLSEYGLQLQE------------KQKLRHMYGVNERQFRTLFDKA 74

Query: 234 ALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTLVFKAGMAKSIHHARVLIRQRHI 413
             L           G+   ++++ L +      RL  +V+K G+A++   AR L+   HI
Sbjct: 75  GKLA----------GKHGENFMILLDS------RLDNVVYKLGLARTRRQARQLVNHGHI 118

Query: 414 RVGRQIVNVPSFMVR 458
            V    V++PS++V+
Sbjct: 119 LVDGSRVDIPSYLVK 133

---

>RS4_BACLD (Q65G42) 30S ribosomal protein S4|
          Length = 200

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 34/138 (24%), Positives = 61/138 (44%), Gaps = 4/138 (2%)
 Frame = +3

Query: 57  RRPYEK-ERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARHLLTLDEKNPRRIFEGA 233
           +RPY        + K + EYGL+ +             +   RH+  ++E+  R +F+ A
Sbjct: 28  KRPYAPGPHGPGQRKKLSEYGLQLQE------------KQKLRHMYGVNERQFRNLFDKA 75

Query: 234 ALLRRMNRYGLLAEGQDKLDYVLALTAENF---LARRLQTLVFKAGMAKSIHHARVLIRQ 404
           A  +   ++G                 ENF   L  RL  +V++ G+A++   AR L+  
Sbjct: 76  A--KMAGKHG-----------------ENFMILLESRLDNIVYRLGLARTRRQARQLVNH 116

Query: 405 RHIRVGRQIVNVPSFMVR 458
            H+ V    V++PS+ V+
Sbjct: 117 GHVLVDGSRVDIPSYQVK 134

---

>RS4_THETN (Q8R7Y1) 30S ribosomal protein S4|
          Length = 206

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 8/80 (10%)
 Frame = +3

Query: 243 RRMNRYGLLAEGQ-----DKLDYVLALTAENFLA---RRLQTLVFKAGMAKSIHHARVLI 398
           +++ RY  + E Q     ++ + +  +T EN L    RRL  +V++ G A S   AR L+
Sbjct: 61  QKLKRYYGILERQFVRYYERAERMRGITGENLLQLLERRLDNVVYRLGFAVSRAQARQLV 120

Query: 399 RQRHIRVGRQIVNVPSFMVR 458
              HI V  + V++PS++V+
Sbjct: 121 SHGHIEVNGKKVDIPSYLVK 140

---

>RS4_TROWT (Q83GC9) 30S ribosomal protein S4|
          Length = 205

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 30/78 (38%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
 Frame = +3

Query: 243 RRMNRYGL----LAEGQDKLDYVLALTAENF---LARRLQTLVFKAGMAKSIHHARVLIR 401
           R   +YGL    LA    +   V  L  EN    L  RL  LV +A  A+SI  AR L+ 
Sbjct: 55  RLRGQYGLREKQLASVYHEARRVKGLAGENLVEMLEMRLDALVLRAAFARSISQARQLVV 114

Query: 402 QRHIRVGRQIVNVPSFMV 455
            RHI V  ++V+ PS+ V
Sbjct: 115 HRHILVDGKLVDRPSYSV 132

---

>RS4_TROW8 (Q83HV1) 30S ribosomal protein S4|
          Length = 205

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 30/78 (38%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
 Frame = +3

Query: 243 RRMNRYGL----LAEGQDKLDYVLALTAENF---LARRLQTLVFKAGMAKSIHHARVLIR 401
           R   +YGL    LA    +   V  L  EN    L  RL  LV +A  A+SI  AR L+ 
Sbjct: 55  RLRGQYGLREKQLASVYHEARRVKGLAGENLVEMLEMRLDALVLRAAFARSISQARQLVV 114

Query: 402 QRHIRVGRQIVNVPSFMV 455
            RHI V  ++V+ PS+ V
Sbjct: 115 HRHILVDGKLVDRPSYSV 132

---

>RS4_CORJK (Q4JTC1) 30S ribosomal protein S4|
          Length = 201

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 3/106 (2%)
 Frame = +3

Query: 147 QYALSRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENF- 323
           Q   +RI+ +  +LL L EK   +   G  L ++  RY   A  +         T +N  
Sbjct: 35  QAGRARIKES-EYLLQLQEKQKAKYTYGV-LEKQFRRYYAEANRRP------GKTGDNLV 86

Query: 324 --LARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMV 455
             L  RL  +V++AG+A++   AR L+   H  V  + VNVPSF V
Sbjct: 87  ILLESRLDNVVYRAGLARTRRQARQLVSHGHFTVNGKKVNVPSFKV 132

---

>RR4_NYMAL (Q6EW46) Chloroplast 30S ribosomal protein S4|
          Length = 201

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 26/97 (26%), Positives = 45/97 (46%)
 Frame = +3

Query: 159 SRIRNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRL 338
           SR    +++ + L+EK   R   G    + +    +  +       VL       L  RL
Sbjct: 36  SRSGKRSQYRIRLEEKQKLRFHYGLTERQLLRYVRIAGKANGSTGQVLL----QLLEMRL 91

Query: 339 QTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
             ++F+ GMA +I  AR L+   HI V  ++V++PS+
Sbjct: 92  DNILFRLGMASTIPGARQLVNHGHILVNGRLVDIPSY 128

---

>RR4_PSINU (Q95CA6) Chloroplast 30S ribosomal protein S4|
          Length = 199

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 18/42 (42%), Positives = 28/42 (66%)
 Frame = +3

Query: 324 LARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
           L  RL  ++F+ G++ +I  AR L+  RHI V  QIV++PS+
Sbjct: 82  LEMRLDNIIFRLGLSPTIPGARQLVNHRHILVNDQIVDIPSY 123

---

>RS4_STAHJ (Q4L760) 30S ribosomal protein S4|
          Length = 200

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 21/93 (22%)
 Frame = +3

Query: 243 RRMNRYGLLAEGQDKLDYVLALT------------------AENF---LARRLQTLVFKA 359
           ++++ YGL    + KL Y+  +T                   ENF   LA RL  +V+  
Sbjct: 42  KKLSEYGLQLREKQKLRYLYGMTERQFRNTFDIAGKQHGVHGENFMILLASRLDAVVYSL 101

Query: 360 GMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVR 458
           G+A++   AR L+   H+ V  + V++PS+ ++
Sbjct: 102 GLARTRRQARQLVGHGHVEVDGRRVDIPSYSLK 134

---

>RS4_STAES (Q8CS54) 30S ribosomal protein S4|
          Length = 200

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 21/93 (22%)
 Frame = +3

Query: 243 RRMNRYGLLAEGQDKLDYVLALT------------------AENF---LARRLQTLVFKA 359
           ++++ YGL    + KL Y+  +T                   ENF   LA RL  +V+  
Sbjct: 42  KKLSEYGLQLREKQKLRYLYGMTERQFRNTFDIAGKQYGVHGENFMILLASRLDAVVYSL 101

Query: 360 GMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVR 458
           G+A++   AR L+   HI V    V++PS+ ++
Sbjct: 102 GLARTRRQARQLVNHGHIEVDGGRVDIPSYSLK 134

---

>RS4_STAEQ (Q5HNI5) 30S ribosomal protein S4|
          Length = 200

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 21/93 (22%)
 Frame = +3

Query: 243 RRMNRYGLLAEGQDKLDYVLALT------------------AENF---LARRLQTLVFKA 359
           ++++ YGL    + KL Y+  +T                   ENF   LA RL  +V+  
Sbjct: 42  KKLSEYGLQLREKQKLRYLYGMTERQFRNTFDIAGKQYGVHGENFMILLASRLDAVVYSL 101

Query: 360 GMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVR 458
           G+A++   AR L+   HI V    V++PS+ ++
Sbjct: 102 GLARTRRQARQLVNHGHIEVDGGRVDIPSYSLK 134

---

>RS4_IDILO (Q5QXV7) 30S ribosomal protein S4|
          Length = 206

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
 Frame = +3

Query: 309 TAENFLA---RRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSFMVRVE 464
           T EN L    +RL  +V++ G A +   AR L+  + + V  Q+VN+PSF VR E
Sbjct: 86  TGENLLQLLEQRLDNVVYRMGFASTRAEARQLVSHKAVVVNGQVVNIPSFKVRPE 140

---

>RR4_FRUTA (Q9FSU1) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 26/94 (27%), Positives = 45/94 (47%)
 Frame = +3

Query: 168 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 347
           +  +++ + L+EK   R   G    + +N   +  + +     VL       L  R   +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGEVLL----QLLEMRPDNV 95

Query: 348 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
           +F+ GMA +I  AR L+  RHI V   IV++PS+
Sbjct: 96  IFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSY 129

---

>RR4_FRUDI (Q9FSV6) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 26/94 (27%), Positives = 45/94 (47%)
 Frame = +3

Query: 168 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 347
           +  +++ + L+EK   R   G    + +N   +  + +     VL       L  R   +
Sbjct: 40  KKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGEVLL----QLLEMRPDNV 95

Query: 348 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
           +F+ GMA +I  AR L+  RHI V   IV++PS+
Sbjct: 96  IFRLGMAPTIPGARQLVNHRHILVNDCIVDIPSY 129

---

>RR4_ANTFO (Q85AX4) Chloroplast 30S ribosomal protein S4|
          Length = 202

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 25/94 (26%), Positives = 44/94 (46%)
 Frame = +3

Query: 168 RNAARHLLTLDEKNPRRIFEGAALLRRMNRYGLLAEGQDKLDYVLALTAENFLARRLQTL 347
           R  +++ + L+EK   R   G    + +    +  + +     VL       L  RL  +
Sbjct: 40  RKISQYRIRLEEKQKLRFHYGITERQLLKYVRIARKAKGSTGQVLL----QLLEMRLDNI 95

Query: 348 VFKAGMAKSIHHARVLIRQRHIRVGRQIVNVPSF 449
           +F+ G+A +I  AR L+  RH+ V    V++PSF
Sbjct: 96  IFRLGLAPTIPGARQLVNHRHVLVNDCTVDIPSF 129


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,885,906
Number of Sequences: 219361
Number of extensions: 1515620
Number of successful extensions: 4580
Number of sequences better than 10.0: 393
Number of HSP's better than 10.0 without gapping: 4400
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4533
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3478785780
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

---