ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags12c01 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT016431.1| Zea mays clone Contig264 mRNA sequence Length = 866 Score = 603 bits (304), Expect = e-169 Identities = 444/488 (90%), Gaps = 2/488 (0%) Strand = Plus / Plus Query: 4 atggtgcacgtcaacttctaccgcaactatggtaagtacattcaagnaaaccaaggcgtc 63 |||||||||||||||||||||||||||||||||||| || |||||| ||||||||||||| Sbjct: 79 atggtgcacgtcaacttctaccgcaactatggtaag-acgttcaag-aaaccaaggcgtc 136 Query: 64 cctatgagaaggagcgtctggatgcagaactaaagctggtgggtgagtatggactgaggt 123 | ||||||||||||||||| ||||| ||||| |||||||| ||||||||||| ||||||| Sbjct: 137 cttatgagaaggagcgtcttgatgctgaactgaagctggtcggtgagtatgggctgaggt 196 Query: 124 gcaagcgtgagctctggagggtccagtatgcattgagcaggatccgtaatgctgcaaggc 183 ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 197 gcaagcgtgagctttggagggtccagtatgcactgagcaggatccgtaatgctgcaaggc 256 Query: 184 acttgctcacactggatgagaagaatccccgccgtatctttgagggtgcagctcttcttc 243 |||||||||| || || |||||||| ||||| |||||||||||||||| || ||||||| Sbjct: 257 acttgctcacccttgacgagaagaacccccgtcgtatctttgagggtgaggcgcttcttc 316 Query: 244 gtcgcatgaaccgctatgggctccttgctgagggccaggacaagcttgattacgtccttg 303 | |||||||||||||||||||| ||||||||||| ||| ||||||||||||| || |||| Sbjct: 317 gccgcatgaaccgctatgggctgcttgctgagggtcagaacaagcttgattatgttcttg 376 Query: 304 ccctgactgctgagaacttccttgcaaggcgccttcagactcttgtcttcaaggctggca 363 |||| || |||||||||||||| |||||||| ||||| || ||||||||||||||||||| Sbjct: 377 ccctcaccgctgagaacttcctcgcaaggcggcttcaaacacttgtcttcaaggctggca 436 Query: 364 tggcaaagtccatccaccatgcccgtgtcttgatcaggcaacgccacatcagggttggca 423 |||| |||||||| |||||||| ||||||||||||| ||| || |||||||||||||||| Sbjct: 437 tggccaagtccattcaccatgctcgtgtcttgatcaagcagcgtcacatcagggttggca 496 Query: 424 ggcagatcgtcaatgtcccctcattcatggtgagggttgaatctgagaagcacattgact 483 |||| || ||||| ||||| ||||||||||||||||| || ||||||||||||||||||| Sbjct: 497 ggcaaattgtcaacgtcccatcattcatggtgagggtggagtctgagaagcacattgact 556 Query: 484 tctcactg 491 | |||||| Sbjct: 557 tttcactg 564
>dbj|AK104761.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-H02, full insert sequence Length = 884 Score = 527 bits (266), Expect = e-146 Identities = 436/490 (88%), Gaps = 2/490 (0%) Strand = Plus / Plus Query: 4 atggtgcacgtcaacttctaccgcaactatggtaagtacattcaagnaaaccaaggcgtc 63 ||||| ||||||| |||||||||||||||||||||| ||||||||| || ||| | || | Sbjct: 65 atggttcacgtcagcttctaccgcaactatggtaag-acattcaag-aagccacgtcgcc 122 Query: 64 cctatgagaaggagcgtctggatgcagaactaaagctggtgggtgagtatggactgaggt 123 | || |||||||||||||| |||||||| || ||||| |||||||||||||||||||||| Sbjct: 123 cttacgagaaggagcgtcttgatgcagagctgaagctagtgggtgagtatggactgaggt 182 Query: 124 gcaagcgtgagctctggagggtccagtatgcattgagcaggatccgtaatgctgcaaggc 183 ||||||||||||| ||| | || |||||||| |||||| | |||||||| |||||||| Sbjct: 183 gcaagcgtgagctgtggcgtgttcagtatgctttgagccgtatccgtaacaatgcaaggc 242 Query: 184 acttgctcacactggatgagaagaatccccgccgtatctttgagggtgcagctcttcttc 243 | |||||||||| |||||||||||||| ||||| ||||||||||||| || || |||| Sbjct: 243 atctgctcacacttgatgagaagaatccacgccgcatctttgagggtgaggcactgcttc 302 Query: 244 gtcgcatgaaccgctatgggctccttgctgagggccaggacaagcttgattacgtccttg 303 | ||||||||||| ||||||||||||||||| || ||| ||||||||||||| ||||||| Sbjct: 303 gccgcatgaaccgttatgggctccttgctgatgggcagaacaagcttgattatgtccttg 362 Query: 304 ccctgactgctgagaacttccttgcaaggcgccttcagactcttgtcttcaaggctggca 363 |||| |||| |||||||||||| |||||||| |||||||||||||||||||||||||||| Sbjct: 363 ccctcactgttgagaacttcctcgcaaggcgtcttcagactcttgtcttcaaggctggca 422 Query: 364 tggcaaagtccatccaccatgcccgtgtcttgatcaggcaacgccacatcagggttggca 423 |||| ||||||||||||||||| |||||| ||||||||||||||||||||||||| |||| Sbjct: 423 tggccaagtccatccaccatgctcgtgtcctgatcaggcaacgccacatcagggtcggca 482 Query: 424 ggcagatcgtcaatgtcccctcattcatggtgagggttgaatctgagaagcacattgact 483 |||| || ||||| |||| || ||||||||||||||||| ||||||||||||||||||| Sbjct: 483 ggcaaattgtcaacatcccgtcgttcatggtgagggttgagtctgagaagcacattgact 542 Query: 484 tctcactgac 493 |||||||||| Sbjct: 543 tctcactgac 552
>dbj|AK104265.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-G01, full insert sequence Length = 884 Score = 527 bits (266), Expect = e-146 Identities = 436/490 (88%), Gaps = 2/490 (0%) Strand = Plus / Plus Query: 4 atggtgcacgtcaacttctaccgcaactatggtaagtacattcaagnaaaccaaggcgtc 63 ||||| ||||||| |||||||||||||||||||||| ||||||||| || ||| | || | Sbjct: 65 atggttcacgtcagcttctaccgcaactatggtaag-acattcaag-aagccacgtcgcc 122 Query: 64 cctatgagaaggagcgtctggatgcagaactaaagctggtgggtgagtatggactgaggt 123 | || |||||||||||||| |||||||| || ||||| |||||||||||||||||||||| Sbjct: 123 cttacgagaaggagcgtcttgatgcagagctgaagctagtgggtgagtatggactgaggt 182 Query: 124 gcaagcgtgagctctggagggtccagtatgcattgagcaggatccgtaatgctgcaaggc 183 ||||||||||||| ||| | || |||||||| |||||| | |||||||| |||||||| Sbjct: 183 gcaagcgtgagctgtggcgtgttcagtatgctttgagccgtatccgtaacaatgcaaggc 242 Query: 184 acttgctcacactggatgagaagaatccccgccgtatctttgagggtgcagctcttcttc 243 | |||||||||| |||||||||||||| ||||| ||||||||||||| || || |||| Sbjct: 243 atctgctcacacttgatgagaagaatccacgccgcatctttgagggtgaggcactgcttc 302 Query: 244 gtcgcatgaaccgctatgggctccttgctgagggccaggacaagcttgattacgtccttg 303 | ||||||||||| ||||||||||||||||| || ||| ||||||||||||| ||||||| Sbjct: 303 gccgcatgaaccgttatgggctccttgctgatgggcagaacaagcttgattatgtccttg 362 Query: 304 ccctgactgctgagaacttccttgcaaggcgccttcagactcttgtcttcaaggctggca 363 |||| |||| |||||||||||| |||||||| |||||||||||||||||||||||||||| Sbjct: 363 ccctcactgttgagaacttcctcgcaaggcgtcttcagactcttgtcttcaaggctggca 422 Query: 364 tggcaaagtccatccaccatgcccgtgtcttgatcaggcaacgccacatcagggttggca 423 |||| ||||||||||||||||| |||||| ||||||||||||||||||||||||| |||| Sbjct: 423 tggccaagtccatccaccatgctcgtgtcctgatcaggcaacgccacatcagggtcggca 482 Query: 424 ggcagatcgtcaatgtcccctcattcatggtgagggttgaatctgagaagcacattgact 483 |||| || ||||| |||| || ||||||||||||||||| ||||||||||||||||||| Sbjct: 483 ggcaaattgtcaacatcccgtcgttcatggtgagggttgagtctgagaagcacattgact 542 Query: 484 tctcactgac 493 |||||||||| Sbjct: 543 tctcactgac 552
>dbj|AK104111.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-G08, full insert sequence Length = 970 Score = 527 bits (266), Expect = e-146 Identities = 436/490 (88%), Gaps = 2/490 (0%) Strand = Plus / Plus Query: 4 atggtgcacgtcaacttctaccgcaactatggtaagtacattcaagnaaaccaaggcgtc 63 ||||| ||||||| |||||||||||||||||||||| ||||||||| || ||| | || | Sbjct: 68 atggttcacgtcagcttctaccgcaactatggtaag-acattcaag-aagccacgtcgcc 125 Query: 64 cctatgagaaggagcgtctggatgcagaactaaagctggtgggtgagtatggactgaggt 123 | || |||||||||||||| |||||||| || ||||| |||||||||||||||||||||| Sbjct: 126 cttacgagaaggagcgtcttgatgcagagctgaagctagtgggtgagtatggactgaggt 185 Query: 124 gcaagcgtgagctctggagggtccagtatgcattgagcaggatccgtaatgctgcaaggc 183 ||||||||||||| ||| | || |||||||| |||||| | |||||||| |||||||| Sbjct: 186 gcaagcgtgagctgtggcgtgttcagtatgctttgagccgtatccgtaacaatgcaaggc 245 Query: 184 acttgctcacactggatgagaagaatccccgccgtatctttgagggtgcagctcttcttc 243 | |||||||||| |||||||||||||| ||||| ||||||||||||| || || |||| Sbjct: 246 atctgctcacacttgatgagaagaatccacgccgcatctttgagggtgaggcactgcttc 305 Query: 244 gtcgcatgaaccgctatgggctccttgctgagggccaggacaagcttgattacgtccttg 303 | ||||||||||| ||||||||||||||||| || ||| ||||||||||||| ||||||| Sbjct: 306 gccgcatgaaccgttatgggctccttgctgatgggcagaacaagcttgattatgtccttg 365 Query: 304 ccctgactgctgagaacttccttgcaaggcgccttcagactcttgtcttcaaggctggca 363 |||| |||| |||||||||||| |||||||| |||||||||||||||||||||||||||| Sbjct: 366 ccctcactgttgagaacttcctcgcaaggcgtcttcagactcttgtcttcaaggctggca 425 Query: 364 tggcaaagtccatccaccatgcccgtgtcttgatcaggcaacgccacatcagggttggca 423 |||| ||||||||||||||||| |||||| ||||||||||||||||||||||||| |||| Sbjct: 426 tggccaagtccatccaccatgctcgtgtcctgatcaggcaacgccacatcagggtcggca 485 Query: 424 ggcagatcgtcaatgtcccctcattcatggtgagggttgaatctgagaagcacattgact 483 |||| || ||||| |||| || ||||||||||||||||| ||||||||||||||||||| Sbjct: 486 ggcaaattgtcaacatcccgtcgttcatggtgagggttgagtctgagaagcacattgact 545 Query: 484 tctcactgac 493 |||||||||| Sbjct: 546 tctcactgac 555
>dbj|AK061350.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-F09, full insert sequence Length = 972 Score = 527 bits (266), Expect = e-146 Identities = 436/490 (88%), Gaps = 2/490 (0%) Strand = Plus / Plus Query: 4 atggtgcacgtcaacttctaccgcaactatggtaagtacattcaagnaaaccaaggcgtc 63 ||||| ||||||| |||||||||||||||||||||| ||||||||| || ||| | || | Sbjct: 65 atggttcacgtcagcttctaccgcaactatggtaag-acattcaag-aagccacgtcgcc 122 Query: 64 cctatgagaaggagcgtctggatgcagaactaaagctggtgggtgagtatggactgaggt 123 | || |||||||||||||| |||||||| || ||||| |||||||||||||||||||||| Sbjct: 123 cttacgagaaggagcgtcttgatgcagagctgaagctagtgggtgagtatggactgaggt 182 Query: 124 gcaagcgtgagctctggagggtccagtatgcattgagcaggatccgtaatgctgcaaggc 183 ||||||||||||| ||| | || |||||||| |||||| | |||||||| |||||||| Sbjct: 183 gcaagcgtgagctgtggcgtgttcagtatgctttgagccgtatccgtaacaatgcaaggc 242 Query: 184 acttgctcacactggatgagaagaatccccgccgtatctttgagggtgcagctcttcttc 243 | |||||||||| |||||||||||||| ||||| ||||||||||||| || || |||| Sbjct: 243 atctgctcacacttgatgagaagaatccacgccgcatctttgagggtgaggcactgcttc 302 Query: 244 gtcgcatgaaccgctatgggctccttgctgagggccaggacaagcttgattacgtccttg 303 | ||||||||||| ||||||||||||||||| || ||| ||||||||||||| ||||||| Sbjct: 303 gccgcatgaaccgttatgggctccttgctgatgggcagaacaagcttgattatgtccttg 362 Query: 304 ccctgactgctgagaacttccttgcaaggcgccttcagactcttgtcttcaaggctggca 363 |||| |||| |||||||||||| |||||||| |||||||||||||||||||||||||||| Sbjct: 363 ccctcactgttgagaacttcctcgcaaggcgtcttcagactcttgtcttcaaggctggca 422 Query: 364 tggcaaagtccatccaccatgcccgtgtcttgatcaggcaacgccacatcagggttggca 423 |||| ||||||||||||||||| |||||| ||||||||||||||||||||||||| |||| Sbjct: 423 tggccaagtccatccaccatgctcgtgtcctgatcaggcaacgccacatcagggtcggca 482 Query: 424 ggcagatcgtcaatgtcccctcattcatggtgagggttgaatctgagaagcacattgact 483 |||| || ||||| |||| || ||||||||||||||||| ||||||||||||||||||| Sbjct: 483 ggcaaattgtcaacatcccgtcgttcatggtgagggttgagtctgagaagcacattgact 542 Query: 484 tctcactgac 493 |||||||||| Sbjct: 543 tctcactgac 552
>dbj|AK104660.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-D11, full insert sequence Length = 955 Score = 519 bits (262), Expect = e-144 Identities = 435/490 (88%), Gaps = 2/490 (0%) Strand = Plus / Plus Query: 4 atggtgcacgtcaacttctaccgcaactatggtaagtacattcaagnaaaccaaggcgtc 63 ||||| ||||||| |||||||||||||||||||||| ||||||||| || ||| | || | Sbjct: 75 atggtccacgtcagcttctaccgcaactatggtaag-acattcaag-aagccacgtcgcc 132 Query: 64 cctatgagaaggagcgtctggatgcagaactaaagctggtgggtgagtatggactgaggt 123 | || |||||||||||||| |||||||| || ||||| |||||||||||||||||||||| Sbjct: 133 cttacgagaaggagcgtcttgatgcagagctgaagctagtgggtgagtatggactgaggt 192 Query: 124 gcaagcgtgagctctggagggtccagtatgcattgagcaggatccgtaatgctgcaaggc 183 ||||||||||||| ||| | || |||||||| |||||| | |||||||| |||||||| Sbjct: 193 gcaagcgtgagctgtggcgtgttcagtatgctttgagccgtatccgtaacaatgcaaggc 252 Query: 184 acttgctcacactggatgagaagaatccccgccgtatctttgagggtgcagctcttcttc 243 || |||||||||| |||||||||||||| ||||| ||||| ||||||| || || |||| Sbjct: 253 acctgctcacacttgatgagaagaatccacgccgcatcttcgagggtgaggcactgcttc 312 Query: 244 gtcgcatgaaccgctatgggctccttgctgagggccaggacaagcttgattacgtccttg 303 | ||||||||||| ||||||||||||||||| || ||| ||||||||||||| ||||||| Sbjct: 313 gccgcatgaaccgttatgggctccttgctgatgggcagaacaagcttgattatgtccttg 372 Query: 304 ccctgactgctgagaacttccttgcaaggcgccttcagactcttgtcttcaaggctggca 363 |||| |||| |||||||||||| |||||||| |||||||||||||||||||||||||||| Sbjct: 373 ccctcactgttgagaacttcctcgcaaggcgtcttcagactcttgtcttcaaggctggca 432 Query: 364 tggcaaagtccatccaccatgcccgtgtcttgatcaggcaacgccacatcagggttggca 423 |||| ||||||||||||||||| |||||| ||||||||||||||||||||||||| |||| Sbjct: 433 tggccaagtccatccaccatgctcgtgtcctgatcaggcaacgccacatcagggtcggca 492 Query: 424 ggcagatcgtcaatgtcccctcattcatggtgagggttgaatctgagaagcacattgact 483 |||| || ||||| |||| || ||||||||||||||||| |||||||| |||||||||| Sbjct: 493 ggcaaattgtcaacatcccgtcgttcatggtgagggttgagtctgagaaacacattgact 552 Query: 484 tctcactgac 493 |||||||||| Sbjct: 553 tctcactgac 562
>dbj|AK072671.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023134P20, full insert sequence Length = 964 Score = 519 bits (262), Expect = e-144 Identities = 435/490 (88%), Gaps = 2/490 (0%) Strand = Plus / Plus Query: 4 atggtgcacgtcaacttctaccgcaactatggtaagtacattcaagnaaaccaaggcgtc 63 ||||| ||||||| |||||||||||||||||||||| ||||||||| || ||| | || | Sbjct: 64 atggtccacgtcagcttctaccgcaactatggtaag-acattcaag-aagccacgtcgcc 121 Query: 64 cctatgagaaggagcgtctggatgcagaactaaagctggtgggtgagtatggactgaggt 123 | || |||||||||||||| |||||||| || ||||| |||||||||||||||||||||| Sbjct: 122 cttacgagaaggagcgtcttgatgcagagctgaagctagtgggtgagtatggactgaggt 181 Query: 124 gcaagcgtgagctctggagggtccagtatgcattgagcaggatccgtaatgctgcaaggc 183 ||||||||||||| ||| | || |||||||| |||||| | |||||||| |||||||| Sbjct: 182 gcaagcgtgagctgtggcgtgttcagtatgctttgagccgtatccgtaacaatgcaaggc 241 Query: 184 acttgctcacactggatgagaagaatccccgccgtatctttgagggtgcagctcttcttc 243 || |||||||||| |||||||||||||| ||||| ||||| ||||||| || || |||| Sbjct: 242 acctgctcacacttgatgagaagaatccacgccgcatcttcgagggtgaggcactgcttc 301 Query: 244 gtcgcatgaaccgctatgggctccttgctgagggccaggacaagcttgattacgtccttg 303 | ||||||||||| ||||||||||||||||| || ||| ||||||||||||| ||||||| Sbjct: 302 gccgcatgaaccgttatgggctccttgctgatgggcagaacaagcttgattatgtccttg 361 Query: 304 ccctgactgctgagaacttccttgcaaggcgccttcagactcttgtcttcaaggctggca 363 |||| |||| |||||||||||| |||||||| |||||||||||||||||||||||||||| Sbjct: 362 ccctcactgttgagaacttcctcgcaaggcgtcttcagactcttgtcttcaaggctggca 421 Query: 364 tggcaaagtccatccaccatgcccgtgtcttgatcaggcaacgccacatcagggttggca 423 |||| ||||||||||||||||| |||||| ||||||||||||||||||||||||| |||| Sbjct: 422 tggccaagtccatccaccatgctcgtgtcctgatcaggcaacgccacatcagggtcggca 481 Query: 424 ggcagatcgtcaatgtcccctcattcatggtgagggttgaatctgagaagcacattgact 483 |||| || ||||| |||| || ||||||||||||||||| |||||||| |||||||||| Sbjct: 482 ggcaaattgtcaacatcccgtcgttcatggtgagggttgagtctgagaaacacattgact 541 Query: 484 tctcactgac 493 |||||||||| Sbjct: 542 tctcactgac 551
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 404 bits (204), Expect = e-109 Identities = 312/348 (89%) Strand = Plus / Plus Query: 69 gagaaggagcgtctggatgcagaactaaagctggtgggtgagtatggactgaggtgcaag 128 |||||||||||||| |||||||| || ||||| ||||||||||||||||||||||||||| Sbjct: 2969194 gagaaggagcgtcttgatgcagagctgaagctagtgggtgagtatggactgaggtgcaag 2969253 Query: 129 cgtgagctctggagggtccagtatgcattgagcaggatccgtaatgctgcaaggcacttg 188 |||||||| ||| | || |||||||| |||||| | |||||||| ||||||||| || Sbjct: 2969254 cgtgagctgtggcgtgttcagtatgctttgagccgtatccgtaacaatgcaaggcatctg 2969313 Query: 189 ctcacactggatgagaagaatccccgccgtatctttgagggtgcagctcttcttcgtcgc 248 |||||||| |||||||||||||| ||||| ||||||||||||| || || ||||| ||| Sbjct: 2969314 ctcacacttgatgagaagaatccacgccgcatctttgagggtgaggcactgcttcgccgc 2969373 Query: 249 atgaaccgctatgggctccttgctgagggccaggacaagcttgattacgtccttgccctg 308 |||||||| ||||||||||||||||| || ||| ||||||||||||| ||||||||||| Sbjct: 2969374 atgaaccgttatgggctccttgctgatgggcagaacaagcttgattatgtccttgccctc 2969433 Query: 309 actgctgagaacttccttgcaaggcgccttcagactcttgtcttcaaggctggcatggca 368 |||| |||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 2969434 actgttgagaacttcctcgcaaggcgtcttcagactcttgtcttcaaggctggcatggcc 2969493 Query: 369 aagtccatccaccatgcccgtgtcttgatcaggcaacgccacatcagg 416 ||||||||||||||||| |||||| ||||||||||||||||||||||| Sbjct: 2969494 aagtccatccaccatgctcgtgtcctgatcaggcaacgccacatcagg 2969541 Score = 159 bits (80), Expect = 1e-35 Identities = 227/276 (82%) Strand = Plus / Plus Query: 51 aaaccaaggcgtccctatgagaaggagcgtctggatgcagaactaaagctggtgggtgag 110 |||||||||||||| || ||||| ||||||| ||||| || || |||||| |||||| Sbjct: 14844799 aaaccaaggcgtccatacgagaaagagcgtcctgatgctgagctgaagctgtatggtgag 14844858 Query: 111 tatggactgaggtgcaagcgtgagctctggagggtccagtatgcattgagcaggatccgt 170 ||||| || |||| |||| ||||||| ||| | || ||||| || | ||| ||||| Sbjct: 14844859 tatggcctcaggtccaagtgtgagctgtggcgtgtgcagtaagccctaagccctatccgc 14844918 Query: 171 aatgctgcaaggcacttgctcacactggatgagaagaatccccgccgtatctttgagggt 230 |||||||||||| | ||||||| || ||||||||||| ||||| |||||||||||||| Sbjct: 14844919 aatgctgcaagggagctgctcacccttgatgagaagaacccccgacgtatctttgagggc 14844978 Query: 231 gcagctcttcttcgtcgcatgaaccgctatgggctccttgctgagggccaggacaagctt 290 | ||||| || || | ||||||||||||||| ||||||| |||||||||| |||||||| Sbjct: 14844979 gaggctctcctgcgccacatgaaccgctatggtctccttggtgagggccagaacaagctt 14845038 Query: 291 gattacgtccttgccctgactgctgagaacttcctt 326 |||||||| ||||| || || | ||||||||||||| Sbjct: 14845039 gattacgtgcttgcgctcaccgttgagaacttcctt 14845074 Score = 97.6 bits (49), Expect = 3e-17 Identities = 73/81 (90%) Strand = Plus / Plus Query: 413 cagggttggcaggcagatcgtcaatgtcccctcattcatggtgagggttgaatctgagaa 472 |||||| |||||||| || ||||| |||| || ||||||||||||||||| |||||||| Sbjct: 2970413 cagggtcggcaggcaaattgtcaacatcccgtcgttcatggtgagggttgagtctgagaa 2970472 Query: 473 gcacattgacttctcactgac 493 ||||||||||||||||||||| Sbjct: 2970473 gcacattgacttctcactgac 2970493 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 4 atggtgcacgtcaacttctaccgcaact 31 ||||| ||||||| |||||||||||||| Sbjct: 2967792 atggttcacgtcagcttctaccgcaact 2967819
>gb|AC109365.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0034P08, complete sequence Length = 173088 Score = 404 bits (204), Expect = e-109 Identities = 312/348 (89%) Strand = Plus / Minus Query: 69 gagaaggagcgtctggatgcagaactaaagctggtgggtgagtatggactgaggtgcaag 128 |||||||||||||| |||||||| || ||||| ||||||||||||||||||||||||||| Sbjct: 9446 gagaaggagcgtcttgatgcagagctgaagctagtgggtgagtatggactgaggtgcaag 9387 Query: 129 cgtgagctctggagggtccagtatgcattgagcaggatccgtaatgctgcaaggcacttg 188 |||||||| ||| | || |||||||| |||||| | |||||||| |||||||||| || Sbjct: 9386 cgtgagctgtggcgtgttcagtatgctttgagccgtatccgtaacaatgcaaggcacctg 9327 Query: 189 ctcacactggatgagaagaatccccgccgtatctttgagggtgcagctcttcttcgtcgc 248 |||||||| |||||||||||||| ||||| ||||| ||||||| || || ||||| ||| Sbjct: 9326 ctcacacttgatgagaagaatccacgccgcatcttcgagggtgaggcactgcttcgccgc 9267 Query: 249 atgaaccgctatgggctccttgctgagggccaggacaagcttgattacgtccttgccctg 308 |||||||| ||||||||||||||||| || ||| ||||||||||||| ||||||||||| Sbjct: 9266 atgaaccgttatgggctccttgctgatgggcagaacaagcttgattatgtccttgccctc 9207 Query: 309 actgctgagaacttccttgcaaggcgccttcagactcttgtcttcaaggctggcatggca 368 |||| |||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 9206 actgttgagaacttcctcgcaaggcgtcttcagactcttgtcttcaaggctggcatggcc 9147 Query: 369 aagtccatccaccatgcccgtgtcttgatcaggcaacgccacatcagg 416 ||||||||||||||||| |||||| ||||||||||||||||||||||| Sbjct: 9146 aagtccatccaccatgctcgtgtcctgatcaggcaacgccacatcagg 9099 Score = 396 bits (200), Expect = e-107 Identities = 311/348 (89%) Strand = Plus / Minus Query: 69 gagaaggagcgtctggatgcagaactaaagctggtgggtgagtatggactgaggtgcaag 128 |||||||||||||| |||||||| || ||||| ||||||||||||||||||||||||||| Sbjct: 14205 gagaaggagcgtcttgatgcagagctgaagctagtgggtgagtatggactgaggtgcaag 14146 Query: 129 cgtgagctctggagggtccagtatgcattgagcaggatccgtaatgctgcaaggcacttg 188 |||||||| ||| | || |||||||| |||||| | |||||||| |||||||||| || Sbjct: 14145 cgtgagctgtggcgtgttcagtatgctttgagccgtatccgtaacaatgcaaggcacctg 14086 Query: 189 ctcacactggatgagaagaatccccgccgtatctttgagggtgcagctcttcttcgtcgc 248 |||||||| |||||||||||||| ||||| ||||| ||||||| || || ||||| ||| Sbjct: 14085 ctcacacttgatgagaagaatccacgccgcatcttcgagggtgaggcactgcttcgccgc 14026 Query: 249 atgaaccgctatgggctccttgctgagggccaggacaagcttgattacgtccttgccctg 308 |||||||| ||||||||||||||||| || ||| ||||||||||||| ||||||||||| Sbjct: 14025 atgaaccgttatgggctccttgctgatgggcagaacaagcttgattatgtccttgccctc 13966 Query: 309 actgctgagaacttccttgcaaggcgccttcagactcttgtcttcaaggctggcatggca 368 |||| ||||||||| || |||||||| |||||||||||||||||||||||||||||||| Sbjct: 13965 actgttgagaactttctcgcaaggcgtcttcagactcttgtcttcaaggctggcatggcc 13906 Query: 369 aagtccatccaccatgcccgtgtcttgatcaggcaacgccacatcagg 416 ||||||||||||||||| |||||| ||||||||||||||||||||||| Sbjct: 13905 aagtccatccaccatgctcgtgtcctgatcaggcaacgccacatcagg 13858 Score = 105 bits (53), Expect = 1e-19 Identities = 74/81 (91%) Strand = Plus / Minus Query: 413 cagggttggcaggcagatcgtcaatgtcccctcattcatggtgagggttgaatctgagaa 472 |||||| |||||||| || ||||| |||| |||||||||||||||||||| |||||||| Sbjct: 12967 cagggtcggcaggcaaattgtcaacatcccatcattcatggtgagggttgagtctgagaa 12908 Query: 473 gcacattgacttctcactgac 493 ||||||||||||||||||||| Sbjct: 12907 gcacattgacttctcactgac 12887 Score = 89.7 bits (45), Expect = 8e-15 Identities = 72/81 (88%) Strand = Plus / Minus Query: 413 cagggttggcaggcagatcgtcaatgtcccctcattcatggtgagggttgaatctgagaa 472 |||||| |||||||| || ||||| |||| || ||||||||||||||||| |||||||| Sbjct: 8286 cagggtcggcaggcaaattgtcaacatcccgtcgttcatggtgagggttgagtctgagaa 8227 Query: 473 gcacattgacttctcactgac 493 |||||||||||||||||||| Sbjct: 8226 acacattgacttctcactgac 8206 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 4 atggtgcacgtcaacttctaccgcaact 31 ||||| ||||||| |||||||||||||| Sbjct: 14927 atggttcacgtcagcttctaccgcaact 14900 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 4 atggtgcacgtcaacttctaccgcaact 31 ||||| ||||||| |||||||||||||| Sbjct: 10821 atggtccacgtcagcttctaccgcaact 10794
>gb|AC109594.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0007P22, complete sequence Length = 148068 Score = 404 bits (204), Expect = e-109 Identities = 312/348 (89%) Strand = Plus / Minus Query: 69 gagaaggagcgtctggatgcagaactaaagctggtgggtgagtatggactgaggtgcaag 128 |||||||||||||| |||||||| || ||||| ||||||||||||||||||||||||||| Sbjct: 120964 gagaaggagcgtcttgatgcagagctgaagctagtgggtgagtatggactgaggtgcaag 120905 Query: 129 cgtgagctctggagggtccagtatgcattgagcaggatccgtaatgctgcaaggcacttg 188 |||||||| ||| | || |||||||| |||||| | |||||||| |||||||||| || Sbjct: 120904 cgtgagctgtggcgtgttcagtatgctttgagccgtatccgtaacaatgcaaggcacctg 120845 Query: 189 ctcacactggatgagaagaatccccgccgtatctttgagggtgcagctcttcttcgtcgc 248 |||||||| |||||||||||||| ||||| ||||| ||||||| || || ||||| ||| Sbjct: 120844 ctcacacttgatgagaagaatccacgccgcatcttcgagggtgaggcactgcttcgccgc 120785 Query: 249 atgaaccgctatgggctccttgctgagggccaggacaagcttgattacgtccttgccctg 308 |||||||| ||||||||||||||||| || ||| ||||||||||||| ||||||||||| Sbjct: 120784 atgaaccgttatgggctccttgctgatgggcagaacaagcttgattatgtccttgccctc 120725 Query: 309 actgctgagaacttccttgcaaggcgccttcagactcttgtcttcaaggctggcatggca 368 |||| |||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 120724 actgttgagaacttcctcgcaaggcgtcttcagactcttgtcttcaaggctggcatggcc 120665 Query: 369 aagtccatccaccatgcccgtgtcttgatcaggcaacgccacatcagg 416 ||||||||||||||||| |||||| ||||||||||||||||||||||| Sbjct: 120664 aagtccatccaccatgctcgtgtcctgatcaggcaacgccacatcagg 120617 Score = 396 bits (200), Expect = e-107 Identities = 311/348 (89%) Strand = Plus / Minus Query: 69 gagaaggagcgtctggatgcagaactaaagctggtgggtgagtatggactgaggtgcaag 128 |||||||||||||| |||||||| || ||||| ||||||||||||||||||||||||||| Sbjct: 125723 gagaaggagcgtcttgatgcagagctgaagctagtgggtgagtatggactgaggtgcaag 125664 Query: 129 cgtgagctctggagggtccagtatgcattgagcaggatccgtaatgctgcaaggcacttg 188 |||||||| ||| | || |||||||| |||||| | |||||||| |||||||||| || Sbjct: 125663 cgtgagctgtggcgtgttcagtatgctttgagccgtatccgtaacaatgcaaggcacctg 125604 Query: 189 ctcacactggatgagaagaatccccgccgtatctttgagggtgcagctcttcttcgtcgc 248 |||||||| |||||||||||||| ||||| ||||| ||||||| || || ||||| ||| Sbjct: 125603 ctcacacttgatgagaagaatccacgccgcatcttcgagggtgaggcactgcttcgccgc 125544 Query: 249 atgaaccgctatgggctccttgctgagggccaggacaagcttgattacgtccttgccctg 308 |||||||| ||||||||||||||||| || ||| ||||||||||||| ||||||||||| Sbjct: 125543 atgaaccgttatgggctccttgctgatgggcagaacaagcttgattatgtccttgccctc 125484 Query: 309 actgctgagaacttccttgcaaggcgccttcagactcttgtcttcaaggctggcatggca 368 |||| ||||||||| || |||||||| |||||||||||||||||||||||||||||||| Sbjct: 125483 actgttgagaactttctcgcaaggcgtcttcagactcttgtcttcaaggctggcatggcc 125424 Query: 369 aagtccatccaccatgcccgtgtcttgatcaggcaacgccacatcagg 416 ||||||||||||||||| |||||| ||||||||||||||||||||||| Sbjct: 125423 aagtccatccaccatgctcgtgtcctgatcaggcaacgccacatcagg 125376 Score = 105 bits (53), Expect = 1e-19 Identities = 74/81 (91%) Strand = Plus / Minus Query: 413 cagggttggcaggcagatcgtcaatgtcccctcattcatggtgagggttgaatctgagaa 472 |||||| |||||||| || ||||| |||| |||||||||||||||||||| |||||||| Sbjct: 124485 cagggtcggcaggcaaattgtcaacatcccatcattcatggtgagggttgagtctgagaa 124426 Query: 473 gcacattgacttctcactgac 493 ||||||||||||||||||||| Sbjct: 124425 gcacattgacttctcactgac 124405 Score = 89.7 bits (45), Expect = 8e-15 Identities = 72/81 (88%) Strand = Plus / Minus Query: 413 cagggttggcaggcagatcgtcaatgtcccctcattcatggtgagggttgaatctgagaa 472 |||||| |||||||| || ||||| |||| || ||||||||||||||||| |||||||| Sbjct: 119804 cagggtcggcaggcaaattgtcaacatcccgtcgttcatggtgagggttgagtctgagaa 119745 Query: 473 gcacattgacttctcactgac 493 |||||||||||||||||||| Sbjct: 119744 acacattgacttctcactgac 119724 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 4 atggtgcacgtcaacttctaccgcaact 31 ||||| ||||||| |||||||||||||| Sbjct: 126445 atggttcacgtcagcttctaccgcaact 126418 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 4 atggtgcacgtcaacttctaccgcaact 31 ||||| ||||||| |||||||||||||| Sbjct: 122339 atggtccacgtcagcttctaccgcaact 122312
>gb|AC134233.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0016I15, complete sequence Length = 166282 Score = 404 bits (204), Expect = e-109 Identities = 312/348 (89%) Strand = Plus / Plus Query: 69 gagaaggagcgtctggatgcagaactaaagctggtgggtgagtatggactgaggtgcaag 128 |||||||||||||| |||||||| || ||||| ||||||||||||||||||||||||||| Sbjct: 106681 gagaaggagcgtcttgatgcagagctgaagctagtgggtgagtatggactgaggtgcaag 106740 Query: 129 cgtgagctctggagggtccagtatgcattgagcaggatccgtaatgctgcaaggcacttg 188 |||||||| ||| | || |||||||| |||||| | |||||||| ||||||||| || Sbjct: 106741 cgtgagctgtggcgtgttcagtatgctttgagccgtatccgtaacaatgcaaggcatctg 106800 Query: 189 ctcacactggatgagaagaatccccgccgtatctttgagggtgcagctcttcttcgtcgc 248 |||||||| |||||||||||||| ||||| ||||||||||||| || || ||||| ||| Sbjct: 106801 ctcacacttgatgagaagaatccacgccgcatctttgagggtgaggcactgcttcgccgc 106860 Query: 249 atgaaccgctatgggctccttgctgagggccaggacaagcttgattacgtccttgccctg 308 |||||||| ||||||||||||||||| || ||| ||||||||||||| ||||||||||| Sbjct: 106861 atgaaccgttatgggctccttgctgatgggcagaacaagcttgattatgtccttgccctc 106920 Query: 309 actgctgagaacttccttgcaaggcgccttcagactcttgtcttcaaggctggcatggca 368 |||| |||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 106921 actgttgagaacttcctcgcaaggcgtcttcagactcttgtcttcaaggctggcatggcc 106980 Query: 369 aagtccatccaccatgcccgtgtcttgatcaggcaacgccacatcagg 416 ||||||||||||||||| |||||| ||||||||||||||||||||||| Sbjct: 106981 aagtccatccaccatgctcgtgtcctgatcaggcaacgccacatcagg 107028 Score = 97.6 bits (49), Expect = 3e-17 Identities = 73/81 (90%) Strand = Plus / Plus Query: 413 cagggttggcaggcagatcgtcaatgtcccctcattcatggtgagggttgaatctgagaa 472 |||||| |||||||| || ||||| |||| || ||||||||||||||||| |||||||| Sbjct: 107900 cagggtcggcaggcaaattgtcaacatcccgtcgttcatggtgagggttgagtctgagaa 107959 Query: 473 gcacattgacttctcactgac 493 ||||||||||||||||||||| Sbjct: 107960 gcacattgacttctcactgac 107980 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 4 atggtgcacgtcaacttctaccgcaact 31 ||||| ||||||| |||||||||||||| Sbjct: 105279 atggttcacgtcagcttctaccgcaact 105306
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 404 bits (204), Expect = e-109 Identities = 312/348 (89%) Strand = Plus / Plus Query: 69 gagaaggagcgtctggatgcagaactaaagctggtgggtgagtatggactgaggtgcaag 128 |||||||||||||| |||||||| || ||||| ||||||||||||||||||||||||||| Sbjct: 22331852 gagaaggagcgtcttgatgcagagctgaagctagtgggtgagtatggactgaggtgcaag 22331911 Query: 129 cgtgagctctggagggtccagtatgcattgagcaggatccgtaatgctgcaaggcacttg 188 |||||||| ||| | || |||||||| |||||| | |||||||| |||||||||| || Sbjct: 22331912 cgtgagctgtggcgtgttcagtatgctttgagccgtatccgtaacaatgcaaggcacctg 22331971 Query: 189 ctcacactggatgagaagaatccccgccgtatctttgagggtgcagctcttcttcgtcgc 248 |||||||| |||||||||||||| ||||| ||||| ||||||| || || ||||| ||| Sbjct: 22331972 ctcacacttgatgagaagaatccacgccgcatcttcgagggtgaggcactgcttcgccgc 22332031 Query: 249 atgaaccgctatgggctccttgctgagggccaggacaagcttgattacgtccttgccctg 308 |||||||| ||||||||||||||||| || ||| ||||||||||||| ||||||||||| Sbjct: 22332032 atgaaccgttatgggctccttgctgatgggcagaacaagcttgattatgtccttgccctc 22332091 Query: 309 actgctgagaacttccttgcaaggcgccttcagactcttgtcttcaaggctggcatggca 368 |||| |||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 22332092 actgttgagaacttcctcgcaaggcgtcttcagactcttgtcttcaaggctggcatggcc 22332151 Query: 369 aagtccatccaccatgcccgtgtcttgatcaggcaacgccacatcagg 416 ||||||||||||||||| |||||| ||||||||||||||||||||||| Sbjct: 22332152 aagtccatccaccatgctcgtgtcctgatcaggcaacgccacatcagg 22332199 Score = 396 bits (200), Expect = e-107 Identities = 311/348 (89%) Strand = Plus / Plus Query: 69 gagaaggagcgtctggatgcagaactaaagctggtgggtgagtatggactgaggtgcaag 128 |||||||||||||| |||||||| || ||||| ||||||||||||||||||||||||||| Sbjct: 22327093 gagaaggagcgtcttgatgcagagctgaagctagtgggtgagtatggactgaggtgcaag 22327152 Query: 129 cgtgagctctggagggtccagtatgcattgagcaggatccgtaatgctgcaaggcacttg 188 |||||||| ||| | || |||||||| |||||| | |||||||| |||||||||| || Sbjct: 22327153 cgtgagctgtggcgtgttcagtatgctttgagccgtatccgtaacaatgcaaggcacctg 22327212 Query: 189 ctcacactggatgagaagaatccccgccgtatctttgagggtgcagctcttcttcgtcgc 248 |||||||| |||||||||||||| ||||| ||||| ||||||| || || ||||| ||| Sbjct: 22327213 ctcacacttgatgagaagaatccacgccgcatcttcgagggtgaggcactgcttcgccgc 22327272 Query: 249 atgaaccgctatgggctccttgctgagggccaggacaagcttgattacgtccttgccctg 308 |||||||| ||||||||||||||||| || ||| ||||||||||||| ||||||||||| Sbjct: 22327273 atgaaccgttatgggctccttgctgatgggcagaacaagcttgattatgtccttgccctc 22327332 Query: 309 actgctgagaacttccttgcaaggcgccttcagactcttgtcttcaaggctggcatggca 368 |||| ||||||||| || |||||||| |||||||||||||||||||||||||||||||| Sbjct: 22327333 actgttgagaactttctcgcaaggcgtcttcagactcttgtcttcaaggctggcatggcc 22327392 Query: 369 aagtccatccaccatgcccgtgtcttgatcaggcaacgccacatcagg 416 ||||||||||||||||| |||||| ||||||||||||||||||||||| Sbjct: 22327393 aagtccatccaccatgctcgtgtcctgatcaggcaacgccacatcagg 22327440 Score = 105 bits (53), Expect = 1e-19 Identities = 74/81 (91%) Strand = Plus / Plus Query: 413 cagggttggcaggcagatcgtcaatgtcccctcattcatggtgagggttgaatctgagaa 472 |||||| |||||||| || ||||| |||| |||||||||||||||||||| |||||||| Sbjct: 22328331 cagggtcggcaggcaaattgtcaacatcccatcattcatggtgagggttgagtctgagaa 22328390 Query: 473 gcacattgacttctcactgac 493 ||||||||||||||||||||| Sbjct: 22328391 gcacattgacttctcactgac 22328411 Score = 89.7 bits (45), Expect = 8e-15 Identities = 72/81 (88%) Strand = Plus / Plus Query: 413 cagggttggcaggcagatcgtcaatgtcccctcattcatggtgagggttgaatctgagaa 472 |||||| |||||||| || ||||| |||| || ||||||||||||||||| |||||||| Sbjct: 22333012 cagggtcggcaggcaaattgtcaacatcccgtcgttcatggtgagggttgagtctgagaa 22333071 Query: 473 gcacattgacttctcactgac 493 |||||||||||||||||||| Sbjct: 22333072 acacattgacttctcactgac 22333092 Score = 65.9 bits (33), Expect = 1e-07 Identities = 94/113 (83%), Gaps = 1/113 (0%) Strand = Plus / Minus Query: 378 caccatgcccgtgtcttgatcaggcaacgccacatcagggttggcaggcagatcgtcaat 437 |||||||| ||||||||||| ||||||| |||||| || |||| ||| || || ||| Sbjct: 19413196 caccatgctcgtgtcttgattaggcaacaccacattagtgttgacagacaaatt-tcagc 19413138 Query: 438 gtcccctcattcatggtgagggttgaatctgagaagcacattgacttctcact 490 |||| |||||||| |||||||||| ||| | |||||||||||||||||||| Sbjct: 19413137 atcccgtcattcatattgagggttgagtctaaaaagcacattgacttctcact 19413085 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 4 atggtgcacgtcaacttctaccgcaact 31 ||||| ||||||| |||||||||||||| Sbjct: 22330477 atggtccacgtcagcttctaccgcaact 22330504 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 4 atggtgcacgtcaacttctaccgcaact 31 ||||| ||||||| |||||||||||||| Sbjct: 22326371 atggttcacgtcagcttctaccgcaact 22326398
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 404 bits (204), Expect = e-109 Identities = 312/348 (89%) Strand = Plus / Plus Query: 69 gagaaggagcgtctggatgcagaactaaagctggtgggtgagtatggactgaggtgcaag 128 |||||||||||||| |||||||| || ||||| ||||||||||||||||||||||||||| Sbjct: 2969305 gagaaggagcgtcttgatgcagagctgaagctagtgggtgagtatggactgaggtgcaag 2969364 Query: 129 cgtgagctctggagggtccagtatgcattgagcaggatccgtaatgctgcaaggcacttg 188 |||||||| ||| | || |||||||| |||||| | |||||||| ||||||||| || Sbjct: 2969365 cgtgagctgtggcgtgttcagtatgctttgagccgtatccgtaacaatgcaaggcatctg 2969424 Query: 189 ctcacactggatgagaagaatccccgccgtatctttgagggtgcagctcttcttcgtcgc 248 |||||||| |||||||||||||| ||||| ||||||||||||| || || ||||| ||| Sbjct: 2969425 ctcacacttgatgagaagaatccacgccgcatctttgagggtgaggcactgcttcgccgc 2969484 Query: 249 atgaaccgctatgggctccttgctgagggccaggacaagcttgattacgtccttgccctg 308 |||||||| ||||||||||||||||| || ||| ||||||||||||| ||||||||||| Sbjct: 2969485 atgaaccgttatgggctccttgctgatgggcagaacaagcttgattatgtccttgccctc 2969544 Query: 309 actgctgagaacttccttgcaaggcgccttcagactcttgtcttcaaggctggcatggca 368 |||| |||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 2969545 actgttgagaacttcctcgcaaggcgtcttcagactcttgtcttcaaggctggcatggcc 2969604 Query: 369 aagtccatccaccatgcccgtgtcttgatcaggcaacgccacatcagg 416 ||||||||||||||||| |||||| ||||||||||||||||||||||| Sbjct: 2969605 aagtccatccaccatgctcgtgtcctgatcaggcaacgccacatcagg 2969652 Score = 159 bits (80), Expect = 1e-35 Identities = 227/276 (82%) Strand = Plus / Plus Query: 51 aaaccaaggcgtccctatgagaaggagcgtctggatgcagaactaaagctggtgggtgag 110 |||||||||||||| || ||||| ||||||| ||||| || || |||||| |||||| Sbjct: 14839333 aaaccaaggcgtccatacgagaaagagcgtcctgatgctgagctgaagctgtatggtgag 14839392 Query: 111 tatggactgaggtgcaagcgtgagctctggagggtccagtatgcattgagcaggatccgt 170 ||||| || |||| |||| ||||||| ||| | || ||||| || | ||| ||||| Sbjct: 14839393 tatggcctcaggtccaagtgtgagctgtggcgtgtgcagtaagccctaagccctatccgc 14839452 Query: 171 aatgctgcaaggcacttgctcacactggatgagaagaatccccgccgtatctttgagggt 230 |||||||||||| | ||||||| || ||||||||||| ||||| |||||||||||||| Sbjct: 14839453 aatgctgcaagggagctgctcacccttgatgagaagaacccccgacgtatctttgagggc 14839512 Query: 231 gcagctcttcttcgtcgcatgaaccgctatgggctccttgctgagggccaggacaagctt 290 | ||||| || || | ||||||||||||||| ||||||| |||||||||| |||||||| Sbjct: 14839513 gaggctctcctgcgccacatgaaccgctatggtctccttggtgagggccagaacaagctt 14839572 Query: 291 gattacgtccttgccctgactgctgagaacttcctt 326 |||||||| ||||| || || | ||||||||||||| Sbjct: 14839573 gattacgtgcttgcgctcaccgttgagaacttcctt 14839608 Score = 97.6 bits (49), Expect = 3e-17 Identities = 73/81 (90%) Strand = Plus / Plus Query: 413 cagggttggcaggcagatcgtcaatgtcccctcattcatggtgagggttgaatctgagaa 472 |||||| |||||||| || ||||| |||| || ||||||||||||||||| |||||||| Sbjct: 2970524 cagggtcggcaggcaaattgtcaacatcccgtcgttcatggtgagggttgagtctgagaa 2970583 Query: 473 gcacattgacttctcactgac 493 ||||||||||||||||||||| Sbjct: 2970584 gcacattgacttctcactgac 2970604 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 4 atggtgcacgtcaacttctaccgcaact 31 ||||| ||||||| |||||||||||||| Sbjct: 2967903 atggttcacgtcagcttctaccgcaact 2967930
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 404 bits (204), Expect = e-109 Identities = 312/348 (89%) Strand = Plus / Plus Query: 69 gagaaggagcgtctggatgcagaactaaagctggtgggtgagtatggactgaggtgcaag 128 |||||||||||||| |||||||| || ||||| ||||||||||||||||||||||||||| Sbjct: 22641763 gagaaggagcgtcttgatgcagagctgaagctagtgggtgagtatggactgaggtgcaag 22641822 Query: 129 cgtgagctctggagggtccagtatgcattgagcaggatccgtaatgctgcaaggcacttg 188 |||||||| ||| | || |||||||| |||||| | |||||||| |||||||||| || Sbjct: 22641823 cgtgagctgtggcgtgttcagtatgctttgagccgtatccgtaacaatgcaaggcacctg 22641882 Query: 189 ctcacactggatgagaagaatccccgccgtatctttgagggtgcagctcttcttcgtcgc 248 |||||||| |||||||||||||| ||||| ||||| ||||||| || || ||||| ||| Sbjct: 22641883 ctcacacttgatgagaagaatccacgccgcatcttcgagggtgaggcactgcttcgccgc 22641942 Query: 249 atgaaccgctatgggctccttgctgagggccaggacaagcttgattacgtccttgccctg 308 |||||||| ||||||||||||||||| || ||| ||||||||||||| ||||||||||| Sbjct: 22641943 atgaaccgttatgggctccttgctgatgggcagaacaagcttgattatgtccttgccctc 22642002 Query: 309 actgctgagaacttccttgcaaggcgccttcagactcttgtcttcaaggctggcatggca 368 |||| |||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 22642003 actgttgagaacttcctcgcaaggcgtcttcagactcttgtcttcaaggctggcatggcc 22642062 Query: 369 aagtccatccaccatgcccgtgtcttgatcaggcaacgccacatcagg 416 ||||||||||||||||| |||||| ||||||||||||||||||||||| Sbjct: 22642063 aagtccatccaccatgctcgtgtcctgatcaggcaacgccacatcagg 22642110 Score = 396 bits (200), Expect = e-107 Identities = 311/348 (89%) Strand = Plus / Plus Query: 69 gagaaggagcgtctggatgcagaactaaagctggtgggtgagtatggactgaggtgcaag 128 |||||||||||||| |||||||| || ||||| ||||||||||||||||||||||||||| Sbjct: 22637004 gagaaggagcgtcttgatgcagagctgaagctagtgggtgagtatggactgaggtgcaag 22637063 Query: 129 cgtgagctctggagggtccagtatgcattgagcaggatccgtaatgctgcaaggcacttg 188 |||||||| ||| | || |||||||| |||||| | |||||||| |||||||||| || Sbjct: 22637064 cgtgagctgtggcgtgttcagtatgctttgagccgtatccgtaacaatgcaaggcacctg 22637123 Query: 189 ctcacactggatgagaagaatccccgccgtatctttgagggtgcagctcttcttcgtcgc 248 |||||||| |||||||||||||| ||||| ||||| ||||||| || || ||||| ||| Sbjct: 22637124 ctcacacttgatgagaagaatccacgccgcatcttcgagggtgaggcactgcttcgccgc 22637183 Query: 249 atgaaccgctatgggctccttgctgagggccaggacaagcttgattacgtccttgccctg 308 |||||||| ||||||||||||||||| || ||| ||||||||||||| ||||||||||| Sbjct: 22637184 atgaaccgttatgggctccttgctgatgggcagaacaagcttgattatgtccttgccctc 22637243 Query: 309 actgctgagaacttccttgcaaggcgccttcagactcttgtcttcaaggctggcatggca 368 |||| ||||||||| || |||||||| |||||||||||||||||||||||||||||||| Sbjct: 22637244 actgttgagaactttctcgcaaggcgtcttcagactcttgtcttcaaggctggcatggcc 22637303 Query: 369 aagtccatccaccatgcccgtgtcttgatcaggcaacgccacatcagg 416 ||||||||||||||||| |||||| ||||||||||||||||||||||| Sbjct: 22637304 aagtccatccaccatgctcgtgtcctgatcaggcaacgccacatcagg 22637351 Score = 105 bits (53), Expect = 1e-19 Identities = 74/81 (91%) Strand = Plus / Plus Query: 413 cagggttggcaggcagatcgtcaatgtcccctcattcatggtgagggttgaatctgagaa 472 |||||| |||||||| || ||||| |||| |||||||||||||||||||| |||||||| Sbjct: 22638242 cagggtcggcaggcaaattgtcaacatcccatcattcatggtgagggttgagtctgagaa 22638301 Query: 473 gcacattgacttctcactgac 493 ||||||||||||||||||||| Sbjct: 22638302 gcacattgacttctcactgac 22638322 Score = 89.7 bits (45), Expect = 8e-15 Identities = 72/81 (88%) Strand = Plus / Plus Query: 413 cagggttggcaggcagatcgtcaatgtcccctcattcatggtgagggttgaatctgagaa 472 |||||| |||||||| || ||||| |||| || ||||||||||||||||| |||||||| Sbjct: 22642923 cagggtcggcaggcaaattgtcaacatcccgtcgttcatggtgagggttgagtctgagaa 22642982 Query: 473 gcacattgacttctcactgac 493 |||||||||||||||||||| Sbjct: 22642983 acacattgacttctcactgac 22643003 Score = 65.9 bits (33), Expect = 1e-07 Identities = 94/113 (83%), Gaps = 1/113 (0%) Strand = Plus / Minus Query: 378 caccatgcccgtgtcttgatcaggcaacgccacatcagggttggcaggcagatcgtcaat 437 |||||||| ||||||||||| ||||||| |||||| || |||| ||| || || ||| Sbjct: 19572745 caccatgctcgtgtcttgattaggcaacaccacattagtgttgacagacaaatt-tcagc 19572687 Query: 438 gtcccctcattcatggtgagggttgaatctgagaagcacattgacttctcact 490 |||| |||||||| |||||||||| ||| | |||||||||||||||||||| Sbjct: 19572686 atcccgtcattcatattgagggttgagtctaaaaagcacattgacttctcact 19572634 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 4 atggtgcacgtcaacttctaccgcaact 31 ||||| ||||||| |||||||||||||| Sbjct: 22640388 atggtccacgtcagcttctaccgcaact 22640415 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 4 atggtgcacgtcaacttctaccgcaact 31 ||||| ||||||| |||||||||||||| Sbjct: 22636282 atggttcacgtcagcttctaccgcaact 22636309
>gb|AY106684.1| Zea mays PCO086432 mRNA sequence Length = 965 Score = 333 bits (168), Expect = 3e-88 Identities = 407/484 (84%), Gaps = 2/484 (0%) Strand = Plus / Plus Query: 4 atggtgcacgtcaacttctaccgcaactatggtaagtacattcaagnaaaccaaggcgtc 63 |||||||| || |||||||||||||||||||| ||| || |||||| || |||||||| | Sbjct: 109 atggtgcatgttaacttctaccgcaactatgggaag-actttcaag-aagccaaggcggc 166 Query: 64 cctatgagaaggagcgtctggatgcagaactaaagctggtgggtgagtatggactgaggt 123 | |||||||||||||| || ||||| || || |||||||| ||||||||||| ||| ||| Sbjct: 167 cgtatgagaaggagcgcctagatgctgagctgaagctggttggtgagtatggcctgcggt 226 Query: 124 gcaagcgtgagctctggagggtccagtatgcattgagcaggatccgtaatgctgcaaggc 183 ||||||||||||| ||| | || |||||||| ||||| | ||| | ||||| || ||| Sbjct: 227 gcaagcgtgagctgtggcgcgtgcagtatgccctgagccgtatcaggaatgcagccaggg 286 Query: 184 acttgctcacactggatgagaagaatccccgccgtatctttgagggtgcagctcttcttc 243 | |||||||| |||||||||||||| || ||||||||||||||||| | || || || | Sbjct: 287 agttgctcaccctggatgagaagaacccacgccgtatctttgagggcgaggcgctcctcc 346 Query: 244 gtcgcatgaaccgctatgggctccttgctgagggccaggacaagcttgattacgtccttg 303 ||||||||||| | ||||| || |||| ||||| ||| |||||||||||||||| |||| Sbjct: 347 gtcgcatgaacagatatggtcttcttggcgagggacagaacaagcttgattacgtgcttg 406 Query: 304 ccctgactgctgagaacttccttgcaaggcgccttcagactcttgtcttcaaggctggca 363 |||| |||| |||||||||||| | ||||| ||||| | ||||||||| ||||| Sbjct: 407 ccctcactgttgagaacttcctccagcgccgcctccagaccatcgtcttcaagaatggca 466 Query: 364 tggcaaagtccatccaccatgcccgtgtcttgatcaggcaacgccacatcagggttggca 423 |||| ||||||||||||||||| |||||| |||||||||| |||||||||||||| || | Sbjct: 467 tggccaagtccatccaccatgctcgtgtcctgatcaggcagcgccacatcagggtgggaa 526 Query: 424 ggcagatcgtcaatgtcccctcattcatggtgagggttgaatctgagaagcacattgact 483 ||||| ||||||| ||||||| |||||||| ||||| ||||| ||||||||||| |||| Sbjct: 527 ggcagctcgtcaacatcccctcgttcatggtcagggtcgaatcagagaagcacatcgact 586 Query: 484 tctc 487 |||| Sbjct: 587 tctc 590
>gb|BT016876.1| Zea mays clone Contig709 mRNA sequence Length = 969 Score = 309 bits (156), Expect = 5e-81 Identities = 404/484 (83%), Gaps = 2/484 (0%) Strand = Plus / Minus Query: 4 atggtgcacgtcaacttctaccgcaactatggtaagtacattcaagnaaaccaaggcgtc 63 |||||||| || |||||||||||||||||||| ||| || |||||| || |||||||| | Sbjct: 906 atggtgcatgttaacttctaccgcaactatgggaag-actttcaag-aagccaaggcggc 849 Query: 64 cctatgagaaggagcgtctggatgcagaactaaagctggtgggtgagtatggactgaggt 123 | |||||||||||||| || ||||| || || |||||||| ||||||||||| ||| ||| Sbjct: 848 cgtatgagaaggagcgcctagatgctgagctgaagctggttggtgagtatggcctgcggt 789 Query: 124 gcaagcgtgagctctggagggtccagtatgcattgagcaggatccgtaatgctgcaaggc 183 ||||||| ||||| ||| | || |||||||| ||||| | ||| | ||||| || ||| Sbjct: 788 gcaagcgcgagctgtggcgcgtgcagtatgccctgagccgtatcaggaatgcagccaggg 729 Query: 184 acttgctcacactggatgagaagaatccccgccgtatctttgagggtgcagctcttcttc 243 | ||||||| |||||||||||||| || ||||||||||||||||| | || || || | Sbjct: 728 agctgctcaccctggatgagaagaacccacgccgtatctttgagggcgaggcgctcctcc 669 Query: 244 gtcgcatgaaccgctatgggctccttgctgagggccaggacaagcttgattacgtccttg 303 | ||||||||| | ||||| || |||| ||||| ||| |||||||||||||||| |||| Sbjct: 668 gccgcatgaacagatatggtcttcttggcgagggacagaacaagcttgattacgtgcttg 609 Query: 304 ccctgactgctgagaacttccttgcaaggcgccttcagactcttgtcttcaaggctggca 363 |||| |||| |||||||||||| | ||||| ||||| | ||||||||| ||||| Sbjct: 608 ccctcactgttgagaacttcctccagcgccgcctccagaccatcgtcttcaagaatggca 549 Query: 364 tggcaaagtccatccaccatgcccgtgtcttgatcaggcaacgccacatcagggttggca 423 |||| ||||||||||||||||| |||||| |||||||||| |||||||||||||| || | Sbjct: 548 tggccaagtccatccaccatgctcgtgtcctgatcaggcagcgccacatcagggtgggaa 489 Query: 424 ggcagatcgtcaatgtcccctcattcatggtgagggttgaatctgagaagcacattgact 483 ||||| ||||||| ||||||| |||||||| ||||| ||||| ||||||||||| |||| Sbjct: 488 ggcagctcgtcaacatcccctcgttcatggtcagggtcgaatcagagaagcacatcgact 429 Query: 484 tctc 487 |||| Sbjct: 428 tctc 425
>gb|BT016340.1| Zea mays clone Contig173 mRNA sequence Length = 806 Score = 264 bits (133), Expect = 2e-67 Identities = 401/485 (82%), Gaps = 4/485 (0%) Strand = Plus / Plus Query: 4 atggtgcacgtcaacttctaccgcaactatggtaagtacattcaagnaaaccaaggcgtc 63 ||||||||||| |||||||| ||||||||||||||| || |||||| || |||||||| | Sbjct: 83 atggtgcacgtgaacttctatcgcaactatggtaag-actttcaag-aagccaaggcggc 140 Query: 64 cctatgagaaggagcgtctggatgcagaactaaagctggtgggtgagtatggactgaggt 123 | |||||||||||||| || ||||| || | || | |||||||| ||||| ||||||| Sbjct: 141 cttatgagaaggagcgccttgatgctgagttgaaattagtgggtgaatatggcctgaggt 200 Query: 124 gcaagcgtgagctctggagggtccagtatgcattgagcaggatccgtaatgctgcaaggc 183 ||||||||||||| ||| | || |||||||| | ||| | ||||| |||||||||||| Sbjct: 201 gcaagcgtgagctgtggcgtgtgcagtatgccctcagccgcatccgaaatgctgcaaggg 260 Query: 184 acttgctcacactggatgagaagaatccccgccgtatctttgagggtgcagctcttcttc 243 | ||||||| || ||||||||||| ||||| |||||||||||||| | || || || | Sbjct: 261 agctgctcacccttgatgagaagaacccccgtcgtatctttgagggcgaggcactcctgc 320 Query: 244 gtcgcatgaaccgctatgggctccttgctgagggccaggacaagcttgattacgtccttg 303 | ||||||||||||||||| || || | |||||||||| |||||||||| || || |||| Sbjct: 321 gccgcatgaaccgctatggtcttctcggtgagggccagaacaagcttgactatgtgcttg 380 Query: 304 ccctgactgctgagaacttccttgca-aggcgccttcagactcttgtcttcaaggctggc 362 | || || | ||||||||| | |||| | |||||||||||| ||||||||||| |||| Sbjct: 381 cactcaccgttgagaactttc-tgcagcgccgccttcagactattgtcttcaagaatggc 439 Query: 363 atggcaaagtccatccaccatgcccgtgtcttgatcaggcaacgccacatcagggttggc 422 ||||| |||||||| || || || ||||| | ||||||||||||||||| || ||||| Sbjct: 440 atggcgaagtccattcatcacgctcgtgtgctcatcaggcaacgccacattagagttggg 499 Query: 423 aggcagatcgtcaatgtcccctcattcatggtgagggttgaatctgagaagcacattgac 482 ||||| | ||||| | ||||||||||||||||| ||||| || ||||||||||| ||| Sbjct: 500 aggcaacttgtcaacattccctcattcatggtgagagttgactcagagaagcacatcgac 559 Query: 483 ttctc 487 ||||| Sbjct: 560 ttctc 564
>gb|AY105823.1| Zea mays PCO145462 mRNA sequence Length = 959 Score = 264 bits (133), Expect = 2e-67 Identities = 401/485 (82%), Gaps = 4/485 (0%) Strand = Plus / Plus Query: 4 atggtgcacgtcaacttctaccgcaactatggtaagtacattcaagnaaaccaaggcgtc 63 ||||||||||| |||||||| ||||||||||||||| || |||||| || |||||||| | Sbjct: 92 atggtgcacgtgaacttctatcgcaactatggtaag-actttcaag-aagccaaggcggc 149 Query: 64 cctatgagaaggagcgtctggatgcagaactaaagctggtgggtgagtatggactgaggt 123 | |||||||||||||| || ||||| || | || | |||||||| ||||| ||||||| Sbjct: 150 cttatgagaaggagcgccttgatgctgagttgaaattagtgggtgaatatggcctgaggt 209 Query: 124 gcaagcgtgagctctggagggtccagtatgcattgagcaggatccgtaatgctgcaaggc 183 ||||||||||||| ||| | || |||||||| | ||| | ||||| |||||||||||| Sbjct: 210 gcaagcgtgagctgtggcgtgtgcagtatgccctcagccgcatccgaaatgctgcaaggg 269 Query: 184 acttgctcacactggatgagaagaatccccgccgtatctttgagggtgcagctcttcttc 243 | ||||||| || ||||||||||| ||||| |||||||||||||| | || || || | Sbjct: 270 agctgctcacccttgatgagaagaacccccgtcgtatctttgagggcgaggcactcctgc 329 Query: 244 gtcgcatgaaccgctatgggctccttgctgagggccaggacaagcttgattacgtccttg 303 | ||||||||||||||||| || || | |||||||||| |||||||||| || || |||| Sbjct: 330 gccgcatgaaccgctatggtcttctcggtgagggccagaacaagcttgactatgtgcttg 389 Query: 304 ccctgactgctgagaacttccttgca-aggcgccttcagactcttgtcttcaaggctggc 362 | || || | ||||||||| | |||| | ||||||||||| ||||||||||| |||| Sbjct: 390 cactcaccgttgagaactttc-tgcagcgccgccttcagaccattgtcttcaagaatggc 448 Query: 363 atggcaaagtccatccaccatgcccgtgtcttgatcaggcaacgccacatcagggttggc 422 ||||| |||||||| || ||||| ||||| | ||||||||||||||||| || ||||| Sbjct: 449 atggcgaagtccattcatcatgctcgtgtgctcatcaggcaacgccacattagagttggg 508 Query: 423 aggcagatcgtcaatgtcccctcattcatggtgagggttgaatctgagaagcacattgac 482 ||||| | ||||| | ||||||||||||||||| ||||| || ||||||||||| ||| Sbjct: 509 aggcaacttgtcaacattccctcattcatggtgagagttgactcagagaagcacatcgac 568 Query: 483 ttctc 487 ||||| Sbjct: 569 ttctc 573
>dbj|AK064760.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-120-H01, full insert sequence Length = 989 Score = 182 bits (92), Expect = 7e-43 Identities = 389/484 (80%), Gaps = 3/484 (0%) Strand = Plus / Plus Query: 4 atggtgcacgtcaacttctaccgcaactatggtaagtacattcaagnaaaccaaggcgtc 63 ||||||| ||| | |||||| ||||||||||| ||| || |||||| ||||||||||||| Sbjct: 95 atggtgcgcgttagcttctatcgcaactatggcaag-actttcaag-aaaccaaggcgtc 152 Query: 64 cctatgagaaggagcgtctggatgcagaactaaagctggtgggtgagtatggactgaggt 123 | || ||||| ||||||| ||||| || || |||||| ||||||||||| || |||| Sbjct: 153 catacgagaaagagcgtcctgatgctgagctgaagctgtatggtgagtatggcctcaggt 212 Query: 124 gcaagcgtgagctctggagggtccagtatgcattgagcaggatccgtaatgctgcaaggc 183 |||| ||||||| ||| | || ||||| || | ||| ||||| |||||||||||| Sbjct: 213 ccaagtgtgagctgtggcgtgtgcagtaagccctaagccctatccgcaatgctgcaaggg 272 Query: 184 acttgctcacactggatgagaagaatccccgccgtatctttgagggtgcagctcttcttc 243 | ||||||| || ||||||||||| ||||| |||||||||||||| | ||||| || | Sbjct: 273 agctgctcacccttgatgagaagaacccccgacgtatctttgagggcgaggctctcctgc 332 Query: 244 gtcgcatgaaccgctatgggctccttgctgagggccaggacaagcttgattacgtccttg 303 | | ||||||||||||||| ||||||| |||||||||| |||||||||||||||| |||| Sbjct: 333 gccacatgaaccgctatggtctccttggtgagggccagaacaagcttgattacgtgcttg 392 Query: 304 ccctgactgctgagaacttccttgcaaggcgccttcagactcttgtcttcaaggctggca 363 | || || | ||||||||||||| | ||||| ||||| ||||||||||| |||| Sbjct: 393 cgctcaccgttgagaacttccttcagtgccgcctccagaccattgtcttcaagaacggca 452 Query: 364 tggcaaagtccatccaccatgcccgtgtcttgatcaggcaacgccacatcagggttggca 423 || || ||||| || |||| | ||| | |||||||||| ||||||||| || || | Sbjct: 453 cggtgaaatccattcatcatgatcatgtactcatcaggcaacaccacatcagagtgggaa 512 Query: 424 ggcagatcgtcaatgtcccctcattcatggtgagggttgaatctgagaagcacattgact 483 ||||| | ||||| |||||| |||||||||||| ||| || ||||||||||| |||| Sbjct: 513 ggcagcttgtcaacatccccttattcatggtgagacttg-attagagaagcacatcgact 571 Query: 484 tctc 487 |||| Sbjct: 572 tctc 575
>gb|AF475098.1| Triticum aestivum 40S ribosomal protein S9 mRNA, partial cds Length = 210 Score = 180 bits (91), Expect = 3e-42 Identities = 103/107 (96%) Strand = Plus / Plus Query: 387 cgtgtcttgatcaggcaacgccacatcagggttggcaggcagatcgtcaatgtcccctca 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 4 cgtgtcttgatcaggcaacgccacatcagggttggcaggcagatcgtcaatgtcccgtcg 63 Query: 447 ttcatggtgagggttgaatctgagaagcacattgacttctcactgac 493 |||||||||||||||||||| ||||||||||| |||||||||||||| Sbjct: 64 ttcatggtgagggttgaatccgagaagcacatcgacttctcactgac 110
>gb|AC084762.8| Oryza sativa chromosome 3 BAC OSJNBa0013O08 genomic sequence, complete sequence Length = 148021 Score = 159 bits (80), Expect = 1e-35 Identities = 227/276 (82%) Strand = Plus / Minus Query: 51 aaaccaaggcgtccctatgagaaggagcgtctggatgcagaactaaagctggtgggtgag 110 |||||||||||||| || ||||| ||||||| ||||| || || |||||| |||||| Sbjct: 87969 aaaccaaggcgtccatacgagaaagagcgtcctgatgctgagctgaagctgtatggtgag 87910 Query: 111 tatggactgaggtgcaagcgtgagctctggagggtccagtatgcattgagcaggatccgt 170 ||||| || |||| |||| ||||||| ||| | || ||||| || | ||| ||||| Sbjct: 87909 tatggcctcaggtccaagtgtgagctgtggcgtgtgcagtaagccctaagccctatccgc 87850 Query: 171 aatgctgcaaggcacttgctcacactggatgagaagaatccccgccgtatctttgagggt 230 |||||||||||| | ||||||| || ||||||||||| ||||| |||||||||||||| Sbjct: 87849 aatgctgcaagggagctgctcacccttgatgagaagaacccccgacgtatctttgagggc 87790 Query: 231 gcagctcttcttcgtcgcatgaaccgctatgggctccttgctgagggccaggacaagctt 290 | ||||| || || | ||||||||||||||| ||||||| |||||||||| |||||||| Sbjct: 87789 gaggctctcctgcgccacatgaaccgctatggtctccttggtgagggccagaacaagctt 87730 Query: 291 gattacgtccttgccctgactgctgagaacttcctt 326 |||||||| ||||| || || | ||||||||||||| Sbjct: 87729 gattacgtgcttgcgctcaccgttgagaacttcctt 87694
>emb|AJ749993.1| Catharanthus roseus mRNA for 40S ribosomal protein S9 (rps9 gene) Length = 939 Score = 155 bits (78), Expect = 2e-34 Identities = 339/426 (79%) Strand = Plus / Plus Query: 63 ccctatgagaaggagcgtctggatgcagaactaaagctggtgggtgagtatggactgagg 122 |||||||||||||||||| ||||||| || | ||||| || || || ||||| ||||| Sbjct: 150 ccctatgagaaggagcgtttggatgctgagttgaagcttgttggagaatatgggttgagg 209 Query: 123 tgcaagcgtgagctctggagggtccagtatgcattgagcaggatccgtaatgctgcaagg 182 |||||| | ||||| |||||||| || |||| |||||| | ||| | ||||||||||| Sbjct: 210 tgcaagagggagctttggagggttcaatatgttttgagccgtatcagaaatgctgcaaga 269 Query: 183 cacttgctcacactggatgagaagaatccccgccgtatctttgagggtgcagctcttctt 242 | | | || ||||||||||| | || || |||||||||||||||| ||| ||| | Sbjct: 270 aatctattgactttggatgagaaggacccacgtcgtatctttgagggtgaagcccttttg 329 Query: 243 cgtcgcatgaaccgctatgggctccttgctgagggccaggacaagcttgattacgtcctt 302 | | |||||| | ||||| || |||| ||||||||| |||| |||||||| ||| | Sbjct: 330 aggaggatgaacaggtatggtctgcttgatgagggccaaaacaaacttgattatgtcttg 389 Query: 303 gccctgactgctgagaacttccttgcaaggcgccttcagactcttgtcttcaaggctggc 362 || ||||||| ||||||||||||| | |||||||| || ||||| |||||| |||| Sbjct: 390 gctctgactgtagagaacttccttgagcgccgccttcaaacccttgttttcaagtctggg 449 Query: 363 atggcaaagtccatccaccatgcccgtgtcttgatcaggcaacgccacatcagggttggc 422 ||||||||||| |||||||||||| | || | || |||||| | ||||| |||||||| Sbjct: 450 atggcaaagtcaatccaccatgccagagtgctcattaggcaaaggcacataagggttgga 509 Query: 423 aggcagatcgtcaatgtcccctcattcatggtgagggttgaatctgagaagcacattgac 482 | |||| | |||||||| || || |||||||| || ||||| ||| |||||||||||||| Sbjct: 510 aagcaggttgtcaatgttccttccttcatggttagagttgactctcagaagcacattgac 569 Query: 483 ttctca 488 |||||| Sbjct: 570 ttctca 575
>gb|BT013198.1| Lycopersicon esculentum clone 134354R, mRNA sequence Length = 963 Score = 125 bits (63), Expect = 1e-25 Identities = 174/211 (82%) Strand = Plus / Plus Query: 277 gccaggacaagcttgattacgtccttgccctgactgctgagaacttccttgcaaggcgcc 336 ||||| ||||||||||||||||| | || || |||| |||||||||||| | | | || | Sbjct: 350 gccagaacaagcttgattacgtcttggcactcactgttgagaacttcctcgaacgtcgtc 409 Query: 337 ttcagactcttgtcttcaaggctggcatggcaaagtccatccaccatgcccgtgtcttga 396 | || || |||||||||||| |||||||||| ||||| ||||||||||| | || | | Sbjct: 410 tgcaaacacttgtcttcaagactggcatggccaagtcaatccaccatgcgagagtgctca 469 Query: 397 tcaggcaacgccacatcagggttggcaggcagatcgtcaatgtcccctcattcatggtga 456 |||||||| | |||||||||||||| ||||| |||| ||||| | ||||||||||||| Sbjct: 470 tcaggcaaaggcacatcagggttggaaggcaagtcgtgaatgttgcttcattcatggtga 529 Query: 457 gggttgaatctgagaagcacattgacttctc 487 | || || ||| ||||||||||||| ||||| Sbjct: 530 gagtcgactctcagaagcacattgatttctc 560 Score = 75.8 bits (38), Expect = 1e-10 Identities = 101/122 (82%) Strand = Plus / Plus Query: 60 cgtccctatgagaaggagcgtctggatgcagaactaaagctggtgggtgagtatggactg 119 ||||| |||||||||||| | |||||||||| | ||||| || || |||||||||||| Sbjct: 133 cgtccttatgagaaggagaggttggatgcagagttgaagcttgttggagagtatggactg 192 Query: 120 aggtgcaagcgtgagctctggagggtccagtatgcattgagcaggatccgtaatgctgca 179 ||||||||| | ||| | ||||| || |||||||| |||||| | ||| | ||||||||| Sbjct: 193 aggtgcaagagggagttgtggagagttcagtatgctttgagccgtatcaggaatgctgca 252 Query: 180 ag 181 || Sbjct: 253 ag 254
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 109 bits (55), Expect = 9e-21 Identities = 189/233 (81%), Gaps = 3/233 (1%) Strand = Plus / Minus Query: 187 tgctcacactggatgagaagaatc---cccgccgtatctttgagggtgcagctcttcttc 243 ||||||| |||||||||||||| |||| |||||||| ||||||| || || || | Sbjct: 25984912 tgctcaccctggatgagaagaacaacacccgtcgtatcttcgagggtgaggcgctcctcc 25984853 Query: 244 gtcgcatgaaccgctatgggctccttgctgagggccaggacaagcttgattacgtccttg 303 | ||||||||| ||||||| ||||||| ||||| ||| |||||||||||||||| |||| Sbjct: 25984852 gccgcatgaactgctatggtctccttggcgagggtcagaacaagcttgattacgtgcttg 25984793 Query: 304 ccctgactgctgagaacttccttgcaaggcgccttcagactcttgtcttcaaggctggca 363 | || |||| |||||||||||| | ||||| |||| | ||||||||| ||||| Sbjct: 25984792 cactcactgttgagaacttcctctagcgccgcctctagaccatcgtcttcaagaatggca 25984733 Query: 364 tggcaaagtccatccaccatgcccgtgtcttgatcaggcaacgccacatcagg 416 |||| ||||| ||||||||||| |||||| | |||||||| | |||||||||| Sbjct: 25984732 tggccaagtcaatccaccatgcacgtgtccttatcaggcagcaccacatcagg 25984680 Score = 69.9 bits (35), Expect = 7e-09 Identities = 56/63 (88%) Strand = Plus / Minus Query: 54 ccaaggcgtccctatgagaaggagcgtctggatgcagaactaaagctggtgggtgagtat 113 |||||||| || ||||||||||||||||| ||||| || || ||||||||||| |||||| Sbjct: 25984977 ccaaggcggccatatgagaaggagcgtcttgatgctgagctgaagctggtgggagagtat 25984918 Query: 114 gga 116 ||| Sbjct: 25984917 gga 25984915 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Minus Query: 412 tcagggttggcaggcagatcgtcaatgtcccctcattcatggtgagggttgaatctgaga 471 ||||||| || |||||| ||||||| | || |||||||| |||||| |||| ||||||| Sbjct: 25983072 tcagggtgggaaggcagctcgtcaacattccatcattcattgtgaggcttgagtctgaga 25983013 Query: 472 agcacattgacttctc 487 ||||||| | |||||| Sbjct: 25983012 agcacatcgccttctc 25982997
>dbj|AP004306.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0506F02 Length = 151612 Score = 109 bits (55), Expect = 9e-21 Identities = 189/233 (81%), Gaps = 3/233 (1%) Strand = Plus / Minus Query: 187 tgctcacactggatgagaagaatc---cccgccgtatctttgagggtgcagctcttcttc 243 ||||||| |||||||||||||| |||| |||||||| ||||||| || || || | Sbjct: 61924 tgctcaccctggatgagaagaacaacacccgtcgtatcttcgagggtgaggcgctcctcc 61865 Query: 244 gtcgcatgaaccgctatgggctccttgctgagggccaggacaagcttgattacgtccttg 303 | ||||||||| ||||||| ||||||| ||||| ||| |||||||||||||||| |||| Sbjct: 61864 gccgcatgaactgctatggtctccttggcgagggtcagaacaagcttgattacgtgcttg 61805 Query: 304 ccctgactgctgagaacttccttgcaaggcgccttcagactcttgtcttcaaggctggca 363 | || |||| |||||||||||| | ||||| |||| | ||||||||| ||||| Sbjct: 61804 cactcactgttgagaacttcctctagcgccgcctctagaccatcgtcttcaagaatggca 61745 Query: 364 tggcaaagtccatccaccatgcccgtgtcttgatcaggcaacgccacatcagg 416 |||| ||||| ||||||||||| |||||| | |||||||| | |||||||||| Sbjct: 61744 tggccaagtcaatccaccatgcacgtgtccttatcaggcagcaccacatcagg 61692 Score = 69.9 bits (35), Expect = 7e-09 Identities = 56/63 (88%) Strand = Plus / Minus Query: 54 ccaaggcgtccctatgagaaggagcgtctggatgcagaactaaagctggtgggtgagtat 113 |||||||| || ||||||||||||||||| ||||| || || ||||||||||| |||||| Sbjct: 61989 ccaaggcggccatatgagaaggagcgtcttgatgctgagctgaagctggtgggagagtat 61930 Query: 114 gga 116 ||| Sbjct: 61929 gga 61927 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Minus Query: 412 tcagggttggcaggcagatcgtcaatgtcccctcattcatggtgagggttgaatctgaga 471 ||||||| || |||||| ||||||| | || |||||||| |||||| |||| ||||||| Sbjct: 60084 tcagggtgggaaggcagctcgtcaacattccatcattcattgtgaggcttgagtctgaga 60025 Query: 472 agcacattgacttctc 487 ||||||| | |||||| Sbjct: 60024 agcacatcgccttctc 60009
>dbj|AP004260.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0011H09 Length = 147992 Score = 109 bits (55), Expect = 9e-21 Identities = 189/233 (81%), Gaps = 3/233 (1%) Strand = Plus / Minus Query: 187 tgctcacactggatgagaagaatc---cccgccgtatctttgagggtgcagctcttcttc 243 ||||||| |||||||||||||| |||| |||||||| ||||||| || || || | Sbjct: 18474 tgctcaccctggatgagaagaacaacacccgtcgtatcttcgagggtgaggcgctcctcc 18415 Query: 244 gtcgcatgaaccgctatgggctccttgctgagggccaggacaagcttgattacgtccttg 303 | ||||||||| ||||||| ||||||| ||||| ||| |||||||||||||||| |||| Sbjct: 18414 gccgcatgaactgctatggtctccttggcgagggtcagaacaagcttgattacgtgcttg 18355 Query: 304 ccctgactgctgagaacttccttgcaaggcgccttcagactcttgtcttcaaggctggca 363 | || |||| |||||||||||| | ||||| |||| | ||||||||| ||||| Sbjct: 18354 cactcactgttgagaacttcctctagcgccgcctctagaccatcgtcttcaagaatggca 18295 Query: 364 tggcaaagtccatccaccatgcccgtgtcttgatcaggcaacgccacatcagg 416 |||| ||||| ||||||||||| |||||| | |||||||| | |||||||||| Sbjct: 18294 tggccaagtcaatccaccatgcacgtgtccttatcaggcagcaccacatcagg 18242 Score = 69.9 bits (35), Expect = 7e-09 Identities = 56/63 (88%) Strand = Plus / Minus Query: 54 ccaaggcgtccctatgagaaggagcgtctggatgcagaactaaagctggtgggtgagtat 113 |||||||| || ||||||||||||||||| ||||| || || ||||||||||| |||||| Sbjct: 18539 ccaaggcggccatatgagaaggagcgtcttgatgctgagctgaagctggtgggagagtat 18480 Query: 114 gga 116 ||| Sbjct: 18479 gga 18477 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Minus Query: 412 tcagggttggcaggcagatcgtcaatgtcccctcattcatggtgagggttgaatctgaga 471 ||||||| || |||||| ||||||| | || |||||||| |||||| |||| ||||||| Sbjct: 16634 tcagggtgggaaggcagctcgtcaacattccatcattcattgtgaggcttgagtctgaga 16575 Query: 472 agcacattgacttctc 487 ||||||| | |||||| Sbjct: 16574 agcacatcgccttctc 16559
>ref|NM_123348.1| Arabidopsis thaliana structural constituent of ribosome AT5G39850 mRNA, complete cds Length = 879 Score = 105 bits (53), Expect = 1e-19 Identities = 322/409 (78%), Gaps = 2/409 (0%) Strand = Plus / Plus Query: 19 ttctaccgcaactatggtaagtacattcaagnaaaccaaggcgtccctatgagaaggagc 78 |||||||| |||||||| || ||||||||| || ||| | ||||| |||||||| |||| Sbjct: 47 ttctaccgaaactatgggaaa-acattcaag-aagccacgtcgtccttatgagaaagagc 104 Query: 79 gtctggatgcagaactaaagctggtgggtgagtatggactgaggtgcaagcgtgagctct 138 |||| ||||| || |||||||| || || || || || || | || ||| | ||||| | Sbjct: 105 gtcttgatgctgagctaaagcttgttggagaatacggtcttcgttgtaagagagagcttt 164 Query: 139 ggagggtccagtatgcattgagcaggatccgtaatgctgcaaggcacttgctcacactgg 198 |||| || || ||| || | ||||| ||||||||||||||||| | | | || || | Sbjct: 165 ggagagttcaatatacacttagcagaatccgtaatgctgcaagagaactcttaactcttg 224 Query: 199 atgagaagaatccccgccgtatctttgagggtgcagctcttcttcgtcgcatgaaccgct 258 ||||||||||||| || ||||||||||| |||| |||||||||| | | ||||| || | Sbjct: 225 atgagaagaatcctcgtcgtatctttgaaggtgaagctcttcttaggagaatgaatcgat 284 Query: 259 atgggctccttgctgagggccaggacaagcttgattacgtccttgccctgactgctgaga 318 |||| || |||| ||| |||| ||||||||||||| || ||||| |||||| ||||| Sbjct: 285 atggtcttcttgatgaaacccagaacaagcttgattatgttcttgctttgactgttgaga 344 Query: 319 acttccttgcaaggcgccttcagactcttgtcttcaaggctggcatggcaaagtccatcc 378 | ||||||| | | || || || ||| ||||||| ||| |||| ||||| |||||||| | Sbjct: 345 atttccttgaacgtcgtctccaaactattgtctttaagtctggtatggctaagtccattc 404 Query: 379 accatgcccgtgtcttgatcaggcaacgccacatcagggttggcaggca 427 |||| || |||||| | ||| | ||| | || ||||||||||| ||||| Sbjct: 405 accacgctcgtgtccttatccgacaaaggcatatcagggttgggaggca 453
>gb|BT024915.1| Arabidopsis thaliana At5g39850 mRNA, complete cds Length = 594 Score = 105 bits (53), Expect = 1e-19 Identities = 322/409 (78%), Gaps = 2/409 (0%) Strand = Plus / Plus Query: 19 ttctaccgcaactatggtaagtacattcaagnaaaccaaggcgtccctatgagaaggagc 78 |||||||| |||||||| || ||||||||| || ||| | ||||| |||||||| |||| Sbjct: 16 ttctaccgaaactatgggaaa-acattcaag-aagccacgtcgtccttatgagaaagagc 73 Query: 79 gtctggatgcagaactaaagctggtgggtgagtatggactgaggtgcaagcgtgagctct 138 |||| ||||| || |||||||| || || || || || || | || ||| | ||||| | Sbjct: 74 gtcttgatgctgagctaaagcttgttggagaatacggtcttcgttgtaagagagagcttt 133 Query: 139 ggagggtccagtatgcattgagcaggatccgtaatgctgcaaggcacttgctcacactgg 198 |||| || || ||| || | ||||| ||||||||||||||||| | | | || || | Sbjct: 134 ggagagttcaatatacacttagcagaatccgtaatgctgcaagagaactcttaactcttg 193 Query: 199 atgagaagaatccccgccgtatctttgagggtgcagctcttcttcgtcgcatgaaccgct 258 ||||||||||||| || ||||||||||| |||| |||||||||| | | ||||| || | Sbjct: 194 atgagaagaatcctcgtcgtatctttgaaggtgaagctcttcttaggagaatgaatcgat 253 Query: 259 atgggctccttgctgagggccaggacaagcttgattacgtccttgccctgactgctgaga 318 |||| || |||| ||| |||| ||||||||||||| || ||||| |||||| ||||| Sbjct: 254 atggtcttcttgatgaaacccagaacaagcttgattatgttcttgctttgactgttgaga 313 Query: 319 acttccttgcaaggcgccttcagactcttgtcttcaaggctggcatggcaaagtccatcc 378 | ||||||| | | || || || ||| ||||||| ||| |||| ||||| |||||||| | Sbjct: 314 atttccttgaacgtcgtctccaaactattgtctttaagtctggtatggctaagtccattc 373 Query: 379 accatgcccgtgtcttgatcaggcaacgccacatcagggttggcaggca 427 |||| || |||||| | ||| | ||| | || ||||||||||| ||||| Sbjct: 374 accacgctcgtgtccttatccgacaaaggcatatcagggttgggaggca 422
>gb|AY088109.1| Arabidopsis thaliana clone 41408 mRNA, complete sequence Length = 880 Score = 105 bits (53), Expect = 1e-19 Identities = 322/409 (78%), Gaps = 2/409 (0%) Strand = Plus / Plus Query: 19 ttctaccgcaactatggtaagtacattcaagnaaaccaaggcgtccctatgagaaggagc 78 |||||||| |||||||| || ||||||||| || ||| | ||||| |||||||| |||| Sbjct: 47 ttctaccgaaactatgggaaa-acattcaag-aagccacgtcgtccttatgagaaagagc 104 Query: 79 gtctggatgcagaactaaagctggtgggtgagtatggactgaggtgcaagcgtgagctct 138 |||| ||||| || |||||||| || || || || || || | || ||| | ||||| | Sbjct: 105 gtcttgatgctgagctaaagcttgttggagaatacggtcttcgttgtaagagagagcttt 164 Query: 139 ggagggtccagtatgcattgagcaggatccgtaatgctgcaaggcacttgctcacactgg 198 |||| || || ||| || | ||||| ||||||||||||||||| | | | || || | Sbjct: 165 ggagagttcaatatacacttagcagaatccgtaatgctgcaagagaactcttaactcttg 224 Query: 199 atgagaagaatccccgccgtatctttgagggtgcagctcttcttcgtcgcatgaaccgct 258 ||||||||||||| || ||||||||||| |||| |||||||||| | | ||||| || | Sbjct: 225 atgagaagaatcctcgtcgtatctttgaaggtgaagctcttcttaggagaatgaatcgat 284 Query: 259 atgggctccttgctgagggccaggacaagcttgattacgtccttgccctgactgctgaga 318 |||| || |||| ||| |||| ||||||||||||| || ||||| |||||| ||||| Sbjct: 285 atggtcttcttgatgaaacccagaacaagcttgattatgttcttgctttgactgttgaga 344 Query: 319 acttccttgcaaggcgccttcagactcttgtcttcaaggctggcatggcaaagtccatcc 378 | ||||||| | | || || || ||| ||||||| ||| |||| ||||| |||||||| | Sbjct: 345 atttccttgaacgtcgtctccaaactattgtctttaagtctggtatggctaagtccattc 404 Query: 379 accatgcccgtgtcttgatcaggcaacgccacatcagggttggcaggca 427 |||| || |||||| | ||| | ||| | || ||||||||||| ||||| Sbjct: 405 accacgctcgtgtccttatccgacaaaggcatatcagggttgggaggca 453
>dbj|AB010077.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MYH19 Length = 77380 Score = 97.6 bits (49), Expect = 3e-17 Identities = 262/333 (78%) Strand = Plus / Plus Query: 60 cgtccctatgagaaggagcgtctggatgcagaactaaagctggtgggtgagtatggactg 119 ||||| |||||||| |||||||| ||||| || |||||||| || || || || || || Sbjct: 3017 cgtccttatgagaaagagcgtcttgatgctgagctaaagcttgttggagaatacggtctt 3076 Query: 120 aggtgcaagcgtgagctctggagggtccagtatgcattgagcaggatccgtaatgctgca 179 | || ||| | ||||| ||||| || || ||| || | ||||| ||||||||||||||| Sbjct: 3077 cgttgtaagagagagctttggagagttcaatatacacttagcagaatccgtaatgctgca 3136 Query: 180 aggcacttgctcacactggatgagaagaatccccgccgtatctttgagggtgcagctctt 239 || | | | || || |||||||||||||| || ||||||||||| |||| ||||||| Sbjct: 3137 agagaactcttaactcttgatgagaagaatcctcgtcgtatctttgaaggtgaagctctt 3196 Query: 240 cttcgtcgcatgaaccgctatgggctccttgctgagggccaggacaagcttgattacgtc 299 ||| | | ||||| || ||||| || |||| ||| |||| ||||||||||||| || Sbjct: 3197 cttaggagaatgaatcgatatggtcttcttgatgaaacccagaacaagcttgattatgtt 3256 Query: 300 cttgccctgactgctgagaacttccttgcaaggcgccttcagactcttgtcttcaaggct 359 ||||| |||||| |||||| ||||||| | | || || || ||| ||||||| ||| || Sbjct: 3257 cttgctttgactgttgagaatttccttgaacgtcgtctccaaactattgtctttaagtct 3316 Query: 360 ggcatggcaaagtccatccaccatgcccgtgtc 392 || ||||| |||||||| ||||| || |||||| Sbjct: 3317 ggtatggctaagtccattcaccacgctcgtgtc 3349
>gb|DQ200374.1| Solanum tuberosum clone 059F12 unknown mRNA Length = 875 Score = 83.8 bits (42), Expect = 5e-13 Identities = 146/178 (82%), Gaps = 2/178 (1%) Strand = Plus / Plus Query: 4 atggtgcacgtcaacttctaccgcaactatggtaagtacattcaagnaaaccaaggcgtc 63 ||||||||||||||||| |||||||||||||| ||| || || ||| || || | |||| Sbjct: 73 atggtgcacgtcaacttttaccgcaactatggaaag-acctttaag-aagcctcgacgtc 130 Query: 64 cctatgagaaggagcgtctggatgcagaactaaagctggtgggtgagtatggactgaggt 123 | |||||||||||| | |||||||||| | ||||| || || |||||||||||||||| Sbjct: 131 cttatgagaaggagaggttggatgcagagttgaagcttgttggagagtatggactgaggt 190 Query: 124 gcaagcgtgagctctggagggtccagtatgcattgagcaggatccgtaatgctgcaag 181 |||| | ||| | ||||| || |||||||| |||||| | ||| | ||||||||||| Sbjct: 191 gcaaaagggagttgtggagagttcagtatgctttgagccgtatcaggaatgctgcaag 248 Score = 79.8 bits (40), Expect = 8e-12 Identities = 172/216 (79%) Strand = Plus / Plus Query: 272 tgagggccaggacaagcttgattacgtccttgccctgactgctgagaacttccttgcaag 331 |||| ||||| ||||||| ||||| ||| | || || |||| ||||||||||||| | | Sbjct: 339 tgagagccagaacaagctcgattatgtcttggcactcactgtcgagaacttccttgaacg 398 Query: 332 gcgccttcagactcttgtcttcaaggctggcatggcaaagtccatccaccatgcccgtgt 391 || || || || ||||| |||||| |||||||||| ||||| || ||||| || | || Sbjct: 399 tcgtctgcaaacccttgtgttcaagactggcatggccaagtcaattcaccacgcaagagt 458 Query: 392 cttgatcaggcaacgccacatcagggttggcaggcagatcgtcaatgtcccctcattcat 451 | ||||||||| | || ||||||||||| ||||| | || ||||| | |||||||| Sbjct: 459 gctcatcaggcaaaggcatatcagggttggaaggcaagtggtgaatgttgcttcattcat 518 Query: 452 ggtgagggttgaatctgagaagcacattgacttctc 487 |||||| || || ||| ||||||||||||||||||| Sbjct: 519 ggtgagagtggactctcagaagcacattgacttctc 554
>ref|NM_121524.3| Arabidopsis thaliana structural constituent of ribosome AT5G15200 mRNA, complete cds Length = 885 Score = 79.8 bits (40), Expect = 8e-12 Identities = 187/236 (79%) Strand = Plus / Plus Query: 249 atgaaccgctatgggctccttgctgagggccaggacaagcttgattacgtccttgccctg 308 |||||||| || ||||| |||| |||| ||||| ||||||| ||||||||| | || || Sbjct: 291 atgaaccgttacgggcttcttgatgagagccagaacaagctcgattacgtcttggctttg 350 Query: 309 actgctgagaacttccttgcaaggcgccttcagactcttgtcttcaaggctggcatggca 368 |||| ||||||||| |||| | || ||||||||| |||| |||||| |||| ||||| Sbjct: 351 actgttgagaactttcttgagcgtcgtcttcagactattgtgttcaagtctggtatggct 410 Query: 369 aagtccatccaccatgcccgtgtcttgatcaggcaacgccacatcagggttggcaggcag 428 ||||| ||||| || | |||||| | |||||||| | || ||||||||||| | ||| Sbjct: 411 aagtctatccatcactctcgtgtcctcatcaggcagaggcatatcagggttggaaagcaa 470 Query: 429 atcgtcaatgtcccctcattcatggtgagggttgaatctgagaagcacattgactt 484 | || || | || |||||||||||||| |||| || |||||||||||||||| Sbjct: 471 ttggtgaacattccatcattcatggtgagacttgattcacagaagcacattgactt 526 Score = 65.9 bits (33), Expect = 1e-07 Identities = 121/148 (81%), Gaps = 2/148 (1%) Strand = Plus / Plus Query: 4 atggtgcacgtcaacttctaccgcaactatggtaagtacattcaagnaaaccaaggcgtc 63 ||||||||||| || ||||||||||||||| ||| || |||||| | ||| | |||| Sbjct: 48 atggtgcacgtttgctactaccgcaactatggaaag-accttcaaggga-ccacgtcgtc 105 Query: 64 cctatgagaaggagcgtctggatgcagaactaaagctggtgggtgagtatggactgaggt 123 | || |||||||||||||| ||| | ||| | |||||||| ||||||||||| ||| | Sbjct: 106 cttacgagaaggagcgtcttgattctgaattgaagctggttggtgagtatggtctgcgta 165 Query: 124 gcaagcgtgagctctggagggtccagta 151 |||||||||||||||||| || ||||| Sbjct: 166 acaagcgtgagctctggagagtgcagta 193
>gb|BT011315.1| Arabidopsis thaliana At5g15200 gene, complete cds Length = 597 Score = 79.8 bits (40), Expect = 8e-12 Identities = 187/236 (79%) Strand = Plus / Plus Query: 249 atgaaccgctatgggctccttgctgagggccaggacaagcttgattacgtccttgccctg 308 |||||||| || ||||| |||| |||| ||||| ||||||| ||||||||| | || || Sbjct: 244 atgaaccgttacgggcttcttgatgagagccagaacaagctcgattacgtcttggctttg 303 Query: 309 actgctgagaacttccttgcaaggcgccttcagactcttgtcttcaaggctggcatggca 368 |||| ||||||||| |||| | || ||||||||| |||| |||||| |||| ||||| Sbjct: 304 actgttgagaactttcttgagcgtcgtcttcagactattgtgttcaagtctggtatggct 363 Query: 369 aagtccatccaccatgcccgtgtcttgatcaggcaacgccacatcagggttggcaggcag 428 ||||| ||||| || | |||||| | |||||||| | || ||||||||||| | ||| Sbjct: 364 aagtctatccatcactctcgtgtcctcatcaggcagaggcatatcagggttggaaagcaa 423 Query: 429 atcgtcaatgtcccctcattcatggtgagggttgaatctgagaagcacattgactt 484 | || || | || |||||||||||||| |||| || |||||||||||||||| Sbjct: 424 ttggtgaacattccatcattcatggtgagacttgattcacagaagcacattgactt 479 Score = 65.9 bits (33), Expect = 1e-07 Identities = 121/148 (81%), Gaps = 2/148 (1%) Strand = Plus / Plus Query: 4 atggtgcacgtcaacttctaccgcaactatggtaagtacattcaagnaaaccaaggcgtc 63 ||||||||||| || ||||||||||||||| ||| || |||||| | ||| | |||| Sbjct: 1 atggtgcacgtttgctactaccgcaactatggaaag-accttcaaggga-ccacgtcgtc 58 Query: 64 cctatgagaaggagcgtctggatgcagaactaaagctggtgggtgagtatggactgaggt 123 | || |||||||||||||| ||| | ||| | |||||||| ||||||||||| ||| | Sbjct: 59 cttacgagaaggagcgtcttgattctgaattgaagctggttggtgagtatggtctgcgta 118 Query: 124 gcaagcgtgagctctggagggtccagta 151 |||||||||||||||||| || ||||| Sbjct: 119 acaagcgtgagctctggagagtgcagta 146
>gb|BT010847.1| Arabidopsis thaliana At5g15200 mRNA, complete cds Length = 745 Score = 79.8 bits (40), Expect = 8e-12 Identities = 187/236 (79%) Strand = Plus / Plus Query: 249 atgaaccgctatgggctccttgctgagggccaggacaagcttgattacgtccttgccctg 308 |||||||| || ||||| |||| |||| ||||| ||||||| ||||||||| | || || Sbjct: 270 atgaaccgttacgggcttcttgatgagagccagaacaagctcgattacgtcttggctttg 329 Query: 309 actgctgagaacttccttgcaaggcgccttcagactcttgtcttcaaggctggcatggca 368 |||| ||||||||| |||| | || ||||||||| |||| |||||| |||| ||||| Sbjct: 330 actgttgagaactttcttgagcgtcgtcttcagactattgtgttcaagtctggtatggct 389 Query: 369 aagtccatccaccatgcccgtgtcttgatcaggcaacgccacatcagggttggcaggcag 428 ||||| ||||| || | |||||| | |||||||| | || ||||||||||| | ||| Sbjct: 390 aagtctatccatcactctcgtgtcctcatcaggcagaggcatatcagggttggaaagcaa 449 Query: 429 atcgtcaatgtcccctcattcatggtgagggttgaatctgagaagcacattgactt 484 | || || | || |||||||||||||| |||| || |||||||||||||||| Sbjct: 450 ttggtgaacattccatcattcatggtgagacttgattcacagaagcacattgactt 505 Score = 65.9 bits (33), Expect = 1e-07 Identities = 121/148 (81%), Gaps = 2/148 (1%) Strand = Plus / Plus Query: 4 atggtgcacgtcaacttctaccgcaactatggtaagtacattcaagnaaaccaaggcgtc 63 ||||||||||| || ||||||||||||||| ||| || |||||| | ||| | |||| Sbjct: 27 atggtgcacgtttgctactaccgcaactatggaaag-accttcaaggga-ccacgtcgtc 84 Query: 64 cctatgagaaggagcgtctggatgcagaactaaagctggtgggtgagtatggactgaggt 123 | || |||||||||||||| ||| | ||| | |||||||| ||||||||||| ||| | Sbjct: 85 cttacgagaaggagcgtcttgattctgaattgaagctggttggtgagtatggtctgcgta 144 Query: 124 gcaagcgtgagctctggagggtccagta 151 |||||||||||||||||| || ||||| Sbjct: 145 acaagcgtgagctctggagagtgcagta 172
>emb|BX829696.1|CNS0A1GO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB2ZF04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 876 Score = 79.8 bits (40), Expect = 8e-12 Identities = 187/236 (79%) Strand = Plus / Plus Query: 249 atgaaccgctatgggctccttgctgagggccaggacaagcttgattacgtccttgccctg 308 |||||||| || ||||| |||| |||| ||||| ||||||| ||||||||| | || || Sbjct: 284 atgaaccgttacgggcttcttgatgagagccagaacaagctcgattacgtcttggctttg 343 Query: 309 actgctgagaacttccttgcaaggcgccttcagactcttgtcttcaaggctggcatggca 368 |||| ||||||||| |||| | || ||||||||| |||| |||||| |||| ||||| Sbjct: 344 actgttgagaactttcttgagcgtcgtcttcagactattgtgttcaagtctggtatggct 403 Query: 369 aagtccatccaccatgcccgtgtcttgatcaggcaacgccacatcagggttggcaggcag 428 ||||| ||||| || | |||||| | |||||||| | || ||||||||||| | ||| Sbjct: 404 aagtctatccatcactctcgtgtcctcatcaggcagaggcatatcagggttggaaagcaa 463 Query: 429 atcgtcaatgtcccctcattcatggtgagggttgaatctgagaagcacattgactt 484 | || || | || |||||||||||||| |||| || |||||||||||||||| Sbjct: 464 ttggtgaacattccatcattcatggtgagacttgattcacagaagcacattgactt 519 Score = 58.0 bits (29), Expect = 3e-05 Identities = 120/148 (81%), Gaps = 2/148 (1%) Strand = Plus / Plus Query: 4 atggtgcacgtcaacttctaccgcaactatggtaagtacattcaagnaaaccaaggcgtc 63 ||||||||||| || ||||||||||||||| ||| || |||||| | ||| | |||| Sbjct: 41 atggtgcacgtttgctactaccgcaactatggaaag-accttcaaggga-ccacgtcgtc 98 Query: 64 cctatgagaaggagcgtctggatgcagaactaaagctggtgggtgagtatggactgaggt 123 | || |||||||||||||| ||| | ||| | |||||||| ||||||||||| ||| | Sbjct: 99 cttacgagaaggagcgtcttgattctgaattgaagctggttggtgagtatggtctgcgta 158 Query: 124 gcaagcgtgagctctggagggtccagta 151 |||||||||| ||||||| || ||||| Sbjct: 159 acaagcgtgagttctggagagtgcagta 186
>emb|BX829457.1|CNS0A1LQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB15ZA11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 551 Score = 79.8 bits (40), Expect = 8e-12 Identities = 187/236 (79%) Strand = Plus / Plus Query: 249 atgaaccgctatgggctccttgctgagggccaggacaagcttgattacgtccttgccctg 308 |||||||| || ||||| |||| |||| ||||| ||||||| ||||||||| | || || Sbjct: 32 atgaaccgttacgggcttcttgatgagagccagaacaagctcgattacgtcttggctttg 91 Query: 309 actgctgagaacttccttgcaaggcgccttcagactcttgtcttcaaggctggcatggca 368 |||| ||||||||| |||| | || ||||||||| |||| |||||| |||| ||||| Sbjct: 92 actgttgagaactttcttgagcgtcgtcttcagactattgtgttcaagtctggtatggct 151 Query: 369 aagtccatccaccatgcccgtgtcttgatcaggcaacgccacatcagggttggcaggcag 428 ||||| ||||| || | |||||| | |||||||| | || ||||||||||| | ||| Sbjct: 152 aagtctatccatcactctcgtgtcctcatcaggcagaggcatatcagggttggaaagcaa 211 Query: 429 atcgtcaatgtcccctcattcatggtgagggttgaatctgagaagcacattgactt 484 | || || | || |||||||||||||| |||| || |||||||||||||||| Sbjct: 212 ttggtgaacattccatcattcatggtgagacttgattcacagaagcacattgactt 267
>emb|BX829588.1|CNS0A17H Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB23ZA06 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 803 Score = 79.8 bits (40), Expect = 8e-12 Identities = 187/236 (79%) Strand = Plus / Plus Query: 249 atgaaccgctatgggctccttgctgagggccaggacaagcttgattacgtccttgccctg 308 |||||||| || ||||| |||| |||| ||||| ||||||| ||||||||| | || || Sbjct: 284 atgaaccgttacgggcttcttgatgagagccagaacaagctcgattacgtcttggctttg 343 Query: 309 actgctgagaacttccttgcaaggcgccttcagactcttgtcttcaaggctggcatggca 368 |||| ||||||||| |||| | || ||||||||| |||| |||||| |||| ||||| Sbjct: 344 actgttgagaactttcttgagcgtcgtcttcagactattgtgttcaagtctggtatggct 403 Query: 369 aagtccatccaccatgcccgtgtcttgatcaggcaacgccacatcagggttggcaggcag 428 ||||| ||||| || | |||||| | |||||||| | || ||||||||||| | ||| Sbjct: 404 aagtctatccatcactctcgtgtcctcatcaggcagaggcatatcagggttggaaagcaa 463 Query: 429 atcgtcaatgtcccctcattcatggtgagggttgaatctgagaagcacattgactt 484 | || || | || |||||||||||||| |||| || |||||||||||||||| Sbjct: 464 ttggtgaacattccatcattcatggtgagacttgattcacagaagcacattgactt 519 Score = 65.9 bits (33), Expect = 1e-07 Identities = 121/148 (81%), Gaps = 2/148 (1%) Strand = Plus / Plus Query: 4 atggtgcacgtcaacttctaccgcaactatggtaagtacattcaagnaaaccaaggcgtc 63 ||||||||||| || ||||||||||||||| ||| || |||||| | ||| | |||| Sbjct: 42 atggtgcacgtttgctactaccgcaactatggaaag-accttcaaggga-ccacgtcgtc 99 Query: 64 cctatgagaaggagcgtctggatgcagaactaaagctggtgggtgagtatggactgaggt 123 | || |||||||||||||| ||| | ||| | |||||||| ||||||||||| ||| | Sbjct: 100 cttacgagaaggagcgtcttgattctgaattgaagctggttggtgagtatggtctgcgta 159 Query: 124 gcaagcgtgagctctggagggtccagta 151 |||||||||||||||||| || ||||| Sbjct: 160 acaagcgtgagctctggagagtgcagta 187
>emb|CT030165.7| M.truncatula DNA sequence from clone MTH2-150K22 on chromosome 3, complete sequence Length = 134390 Score = 79.8 bits (40), Expect = 8e-12 Identities = 166/208 (79%) Strand = Plus / Minus Query: 283 acaagcttgattacgtccttgccctgactgctgagaacttccttgcaaggcgccttcaga 342 ||||||||||||| || | || || |||| |||||| || |||| | | || ||||||| Sbjct: 17174 acaagcttgattatgtgttggctctcactgttgagaattttcttgaacgtcgtcttcaga 17115 Query: 343 ctcttgtcttcaaggctggcatggcaaagtccatccaccatgcccgtgtcttgatcaggc 402 ||||||| ||||| |||||||||| ||||| || || ||||| | || | ||||||| Sbjct: 17114 ctcttgtgttcaaatctggcatggctaagtctattcatcatgctagggttctaatcaggc 17055 Query: 403 aacgccacatcagggttggcaggcagatcgtcaatgtcccctcattcatggtgagggttg 462 | | |||||||||||||| |||||| | || || |||| || |||||||| ||||||| Sbjct: 17054 agaggcacatcagggttgggaggcaggttgtgaacatcccatccttcatggtaagggttg 16995 Query: 463 aatctgagaagcacattgacttctcact 490 | || |||||||||||||||| ||||| Sbjct: 16994 attcacagaagcacattgacttttcact 16967 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 192 acactggatgagaagaatccccgccgtatctttgagggtg 231 |||||||||||||||||||| || || ||||||||||||| Sbjct: 17265 acactggatgagaagaatcctcgtcggatctttgagggtg 17226
>dbj|AB226106.1| Aspergillus oryzae cDNA, contig sequence: AoEST2963 Length = 800 Score = 75.8 bits (38), Expect = 1e-10 Identities = 74/86 (86%) Strand = Plus / Plus Query: 369 aagtccatccaccatgcccgtgtcttgatcaggcaacgccacatcagggttggcaggcag 428 |||||||||||||| ||||||||| |||||| ||| ||||||||| | || |||| |||| Sbjct: 406 aagtccatccaccacgcccgtgtcctgatcaagcagcgccacatccgcgtcggcaagcag 465 Query: 429 atcgtcaatgtcccctcattcatggt 454 || ||||| || ||||| |||||||| Sbjct: 466 attgtcaacgttccctccttcatggt 491
>dbj|AP007167.1| Aspergillus oryzae RIB40 genomic DNA, SC020 Length = 1824958 Score = 75.8 bits (38), Expect = 1e-10 Identities = 74/86 (86%) Strand = Plus / Minus Query: 369 aagtccatccaccatgcccgtgtcttgatcaggcaacgccacatcagggttggcaggcag 428 |||||||||||||| ||||||||| |||||| ||| ||||||||| | || |||| |||| Sbjct: 742513 aagtccatccaccacgcccgtgtcctgatcaagcagcgccacatccgcgtcggcaagcag 742454 Query: 429 atcgtcaatgtcccctcattcatggt 454 || ||||| || ||||| |||||||| Sbjct: 742453 attgtcaacgttccctccttcatggt 742428
>gb|AY389659.1| Hyacinthus orientalis 40S ribosomal protein S9 (RPS9) mRNA, complete cds Length = 800 Score = 71.9 bits (36), Expect = 2e-09 Identities = 207/264 (78%) Strand = Plus / Plus Query: 60 cgtccctatgagaaggagcgtctggatgcagaactaaagctggtgggtgagtatggactg 119 ||||||||||||||||| ||||| ||||| || | ||||| || |||||||||||||| Sbjct: 90 cgtccctatgagaaggaacgtcttgatgctgagttgaagcttgttggtgagtatggactc 149 Query: 120 aggtgcaagcgtgagctctggagggtccagtatgcattgagcaggatccgtaatgctgca 179 || |||| | ||||| |||||||| ||||||| |||| || || || ||||| || Sbjct: 150 agagccaagagggagctgtggagggtgcagtatgttctgagtagaatacgcaatgccgct 209 Query: 180 aggcacttgctcacactggatgagaagaatccccgccgtatctttgagggtgcagctctt 239 ||||| | || || |||||||||| | | || |||||| | |||||||||| ||||| Sbjct: 210 aggcagctccttactctggatgagagggaccctcgccgtgtatttgagggtgaggctctc 269 Query: 240 cttcgtcgcatgaaccgctatgggctccttgctgagggccaggacaagcttgattacgtc 299 || ||| | ||| || ||||| || || | ||||| ||| ||||||||||||||||| Sbjct: 270 ctccgtaggatgcacaaatatggtcttctcgatgaggagcagaacaagcttgattacgtc 329 Query: 300 cttgccctgactgctgagaacttc 323 ||||| |||||| ||||||||| Sbjct: 330 cttgcattgactgtagagaacttc 353
>emb|BX830539.1|CNS0A1E8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB89ZG09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 643 Score = 71.9 bits (36), Expect = 2e-09 Identities = 186/236 (78%) Strand = Plus / Plus Query: 249 atgaaccgctatgggctccttgctgagggccaggacaagcttgattacgtccttgccctg 308 |||||||| || ||||| |||| |||| ||||| ||||||| ||||||||| | || || Sbjct: 120 atgaaccgttacgggcttcttgatgagagccagaacaagctcgattacgtcttggctttg 179 Query: 309 actgctgagaacttccttgcaaggcgccttcagactcttgtcttcaaggctggcatggca 368 |||| ||||||||| |||| | || ||||||||| |||| |||||| |||| ||||| Sbjct: 180 actgttgagaactttcttgagcgtcgtcttcagactattgtgttcaagtctggtatggct 239 Query: 369 aagtccatccaccatgcccgtgtcttgatcaggcaacgccacatcagggttggcaggcag 428 ||||| ||||| || | |||||| | |||||||| | || |||||||||| | ||| Sbjct: 240 aagtctatccatcactctcgtgtcctcatcaggcagaggcatctcagggttggaaagcaa 299 Query: 429 atcgtcaatgtcccctcattcatggtgagggttgaatctgagaagcacattgactt 484 | || || | || |||||||||||||| |||| || |||||||||||||||| Sbjct: 300 ttggtgaacattccatcattcatggtgagacttgattcacagaagcacattgactt 355
>gb|AF154636.1| Nicotiana tabacum clone PR5 mRNA sequence Length = 673 Score = 71.9 bits (36), Expect = 2e-09 Identities = 123/152 (80%) Strand = Plus / Plus Query: 336 cttcagactcttgtcttcaaggctggcatggcaaagtccatccaccatgcccgtgtcttg 395 ||||| ||||||||||||||| |||||||||| ||||| ||||||||||| | || | Sbjct: 218 cttcaaactcttgtcttcaagactggcatggctaagtcaatccaccatgctagagtacta 277 Query: 396 atcaggcaacgccacatcagggttggcaggcagatcgtcaatgtcccctcattcatggtg 455 || |||||| | || ||||| ||||| |||||| | || ||||| || || || |||||| Sbjct: 278 attaggcaaaggcatatcagagttggtaggcaggtggtgaatgttccttcttttatggtg 337 Query: 456 agggttgaatctgagaagcacattgacttctc 487 || | || || ||||||||||||||||||| Sbjct: 338 agactggactcccagaagcacattgacttctc 369
>gb|AC151815.1| Solanum demissum chromosome 5 clone PGEC472P22 map MAP_LOC, complete sequence Length = 136150 Score = 67.9 bits (34), Expect = 3e-08 Identities = 100/122 (81%) Strand = Plus / Plus Query: 60 cgtccctatgagaaggagcgtctggatgcagaactaaagctggtgggtgagtatggactg 119 |||||||||||||||||| | |||||||||| | ||||| || || |||||||||||| Sbjct: 119884 cgtccctatgagaaggagaggttggatgcagagttgaagcttgttggagagtatggactg 119943 Query: 120 aggtgcaagcgtgagctctggagggtccagtatgcattgagcaggatccgtaatgctgca 179 ||||||| | ||| | ||||| || |||||||| |||||| | ||| | ||||||||| Sbjct: 119944 cggtgcaaaagggagttgtggagagttcagtatgctttgagccgtatcaggaatgctgca 120003 Query: 180 ag 181 || Sbjct: 120004 ag 120005 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 444 tcattcatggtgagggttgaatctgagaagcacattgacttctc 487 |||||||||||||| || || ||| ||||||||||||||||||| Sbjct: 121228 tcattcatggtgagagtggactctcagaagcacattgacttctc 121271 Score = 54.0 bits (27), Expect = 4e-04 Identities = 90/111 (81%) Strand = Plus / Plus Query: 272 tgagggccaggacaagcttgattacgtccttgccctgactgctgagaacttccttgcaag 331 |||| ||||| ||||||| ||||| ||| | || || |||| |||||||||||||| | | Sbjct: 120096 tgagagccagaacaagctcgattatgtcttggcactcactgttgagaacttccttgaacg 120155 Query: 332 gcgccttcagactcttgtcttcaaggctggcatggcaaagtccatccacca 382 || || || || ||||| |||||| |||||||||| ||||| || ||||| Sbjct: 120156 tcgtctgcaaacccttgtgttcaagactggcatggctaagtcaattcacca 120206
>gb|AC108224.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0038F07, complete sequence Length = 175703 Score = 65.9 bits (33), Expect = 1e-07 Identities = 94/113 (83%), Gaps = 1/113 (0%) Strand = Plus / Minus Query: 378 caccatgcccgtgtcttgatcaggcaacgccacatcagggttggcaggcagatcgtcaat 437 |||||||| ||||||||||| ||||||| |||||| || |||| ||| || || ||| Sbjct: 131747 caccatgctcgtgtcttgattaggcaacaccacattagtgttgacagacaaatt-tcagc 131689 Query: 438 gtcccctcattcatggtgagggttgaatctgagaagcacattgacttctcact 490 |||| |||||||| |||||||||| ||| | |||||||||||||||||||| Sbjct: 131688 atcccgtcattcatattgagggttgagtctaaaaagcacattgacttctcact 131636
>gb|BT014007.1| Lycopersicon esculentum clone 133059F, mRNA sequence Length = 891 Score = 63.9 bits (32), Expect = 5e-07 Identities = 80/96 (83%) Strand = Plus / Plus Query: 66 tatgagaaggagcgtctggatgcagaactaaagctggtgggtgagtatggactgaggtgc 125 |||||||||||||| |||||||||| | ||||| || || || ||||| ||||||||| Sbjct: 124 tatgagaaggagcgattggatgcagagttgaagcttgttggagaatatgggctgaggtgc 183 Query: 126 aagcgtgagctctggagggtccagtatgcattgagc 161 ||| | ||||| ||||| || |||||||| |||||| Sbjct: 184 aagagagagctttggagagttcagtatgccttgagc 219 Score = 60.0 bits (30), Expect = 7e-06 Identities = 93/114 (81%) Strand = Plus / Plus Query: 272 tgagggccaggacaagcttgattacgtccttgccctgactgctgagaacttccttgcaag 331 |||| ||||| ||||||||||||| ||| | ||||| |||| |||||||| |||| | Sbjct: 330 tgagagccagaacaagcttgattatgtcttggccctcactgtggagaactttcttgagcg 389 Query: 332 gcgccttcagactcttgtcttcaaggctggcatggcaaagtccatccaccatgc 385 || || || || || ||||||||| |||||||||| ||||| ||||||||||| Sbjct: 390 tcgtctccaaaccctcgtcttcaagactggcatggctaagtcaatccaccatgc 443 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 447 ttcatggtgagggttgaatctgagaagcacattgacttctc 487 ||||||||||| || || || ||||||||||||||||||| Sbjct: 505 ttcatggtgagagtggactcccagaagcacattgacttctc 545
>emb|AL353993.1|ATF8M21 Arabidopsis thaliana DNA chromosome 5, BAC clone F8M21 (ESSA project) Length = 103996 Score = 63.9 bits (32), Expect = 5e-07 Identities = 77/92 (83%) Strand = Plus / Minus Query: 60 cgtccctatgagaaggagcgtctggatgcagaactaaagctggtgggtgagtatggactg 119 ||||| || |||||||||||||| ||| | ||| | |||||||| ||||||||||| ||| Sbjct: 39930 cgtccttacgagaaggagcgtcttgattctgaattgaagctggttggtgagtatggtctg 39871 Query: 120 aggtgcaagcgtgagctctggagggtccagta 151 | |||||||||||||||||| || ||||| Sbjct: 39870 cgtaacaagcgtgagctctggagagtgcagta 39839 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Minus Query: 444 tcattcatggtgagggttgaatctgagaagcacattgactt 484 |||||||||||||| |||| || |||||||||||||||| Sbjct: 39194 tcattcatggtgagacttgattcacagaagcacattgactt 39154
>ref|XM_657315.1| Aspergillus nidulans FGSC A4 40S ribosomal protein S9 (AN4803.2), mRNA Length = 582 Score = 60.0 bits (30), Expect = 7e-06 Identities = 72/86 (83%) Strand = Plus / Plus Query: 369 aagtccatccaccatgcccgtgtcttgatcaggcaacgccacatcagggttggcaggcag 428 |||||||||||||| ||||||||| |||||| ||| || |||||| | || |||| |||| Sbjct: 358 aagtccatccaccacgcccgtgtcctgatcaagcagcgtcacatccgtgtcggcaagcag 417 Query: 429 atcgtcaatgtcccctcattcatggt 454 || ||||| || ||||| | |||||| Sbjct: 418 attgtcaacgttccctcctacatggt 443
>ref|XM_366876.1| Magnaporthe grisea 70-15 chromosome VII hypothetical protein (MG02952.4) partial mRNA Length = 576 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 369 aagtccatccaccatgcccgtgtcttgatcaggcaacgccacatcagggttggcaggcag 428 |||||||||||||| ||||||||| | || | || ||||||||| | || |||| |||| Sbjct: 352 aagtccatccaccacgcccgtgtcctcattcgccagcgccacatccgcgtcggcaagcag 411 Query: 429 atcgtcaatgtcccctc 445 |||||||| |||||||| Sbjct: 412 atcgtcaacgtcccctc 428
>emb|CT009492.5| M.truncatula DNA sequence from clone MTH2-93A21 on chromosome 3, complete sequence Length = 122557 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 414 agggttggcaggcagatcgtcaatgtcccctcattcatggtgagggttgaatctgagaag 473 |||||||| |||||| | || || |||| || ||||||||||||||||| || ||||| Sbjct: 99964 agggttgggaggcaggtggtgaacatcccatccttcatggtgagggttgattcacagaag 100023 Query: 474 cacattgacttctcact 490 ||||||||||| ||||| Sbjct: 100024 cacattgacttttcact 100040 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 336 cttcagactcttgtcttcaaggctggcatggcaaagtccatccaccatgc 385 |||||||||||||| ||||| |||||||||| ||||| || |||||||| Sbjct: 105770 cttcagactcttgtgttcaaatctggcatggctaagtctattcaccatgc 105721 Score = 50.1 bits (25), Expect = 0.007 Identities = 64/77 (83%) Strand = Plus / Minus Query: 414 agggttggcaggcagatcgtcaatgtcccctcattcatggtgagggttgaatctgagaag 473 |||||||| |||||| | || || |||| || |||||||| |||||||| || ||||| Sbjct: 104781 agggttgggaggcaggttgtgaacatcccatccttcatggtaagggttgattcacagaag 104722 Query: 474 cacattgacttctcact 490 ||||||||||| ||||| Sbjct: 104721 cacattgacttttcact 104705 Score = 44.1 bits (22), Expect = 0.43 Identities = 34/38 (89%) Strand = Plus / Plus Query: 336 cttcagactcttgtcttcaaggctggcatggcaaagtc 373 |||||||||||||| ||||| |||||||||| ||||| Sbjct: 99120 cttcagactcttgtgttcaaatctggcatggctaagtc 99157 Score = 40.1 bits (20), Expect = 6.7 Identities = 35/40 (87%) Strand = Plus / Minus Query: 192 acactggatgagaagaatccccgccgtatctttgagggtg 231 ||||||||||||||||| || || || |||||||| |||| Sbjct: 105914 acactggatgagaagaaccctcgtcggatctttgaaggtg 105875 Score = 40.1 bits (20), Expect = 6.7 Identities = 35/40 (87%) Strand = Plus / Plus Query: 192 acactggatgagaagaatccccgccgtatctttgagggtg 231 ||||||||||||||||| || || || |||||||| |||| Sbjct: 98976 acactggatgagaagaaccctcgtcggatctttgaaggtg 99015
>gb|AC146548.11| Medicago truncatula clone mth2-2p3, complete sequence Length = 129327 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 414 agggttggcaggcagatcgtcaatgtcccctcattcatggtgagggttgaatctgagaag 473 |||||||| |||||| | || || |||| || ||||||||||||||||| || ||||| Sbjct: 55539 agggttgggaggcaggtggtgaacatcccatccttcatggtgagggttgattcacagaag 55598 Query: 474 cacattgacttctcact 490 ||||||||||| ||||| Sbjct: 55599 cacattgacttttcact 55615 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 413 cagggttggcaggcagatcgtcaatgtcccctcattcatggtgagggttgaatctgagaa 472 ||||||||| |||||| | || || |||| || ||||||||||||||||| || |||| Sbjct: 53088 cagggttgggaggcaggttgttaacatcccatccttcatggtgagggttgattcacagaa 53147 Query: 473 gcacattgactt 484 |||||||||||| Sbjct: 53148 gcacattgactt 53159 Score = 40.1 bits (20), Expect = 6.7 Identities = 41/48 (85%) Strand = Plus / Plus Query: 192 acactggatgagaagaatccccgccgtatctttgagggtgcagctctt 239 ||||||||||| ||||| || || || ||||| ||||||| ||||||| Sbjct: 49481 acactggatgaaaagaaccctcgtcggatcttcgagggtgaagctctt 49528
>gb|AC135233.19| Medicago truncatula clone mth2-14c14, complete sequence Length = 108028 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Minus Query: 414 agggttggcaggcagatcgtcaatgtcccctcattcatggtgagggttgaatctgagaag 473 |||||||| |||||| | || || |||| || ||||||||||||||||| || ||||| Sbjct: 62265 agggttgggaggcaggtggtgaacatcccatccttcatggtgagggttgattcacagaag 62206 Query: 474 cacattgacttctcact 490 ||||||||||| ||||| Sbjct: 62205 cacattgacttttcact 62189 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 192 acactggatgagaagaatccccgccgtatctttgagggtg 231 |||||||||||||||||||| || || ||||||||||||| Sbjct: 53973 acactggatgagaagaatcctcgtcggatctttgagggtg 54012 Score = 48.1 bits (24), Expect = 0.027 Identities = 39/44 (88%) Strand = Plus / Plus Query: 447 ttcatggtgagggttgaatctgagaagcacattgacttctcact 490 |||||||| |||||||| || |||||||||||||||| ||||| Sbjct: 54885 ttcatggtaagggttgattcacagaagcacattgacttttcact 54928
>ref|XM_533590.2| PREDICTED: Canis familiaris similar to 40S ribosomal protein S9 (LOC476387), mRNA Length = 696 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 364 tggcaaagtccatccaccatgcccgtgtcttgatcaggcaacgccacatcagggt 418 |||| ||||||||||||||||||||||| ||||| | || ||||| |||||||| Sbjct: 385 tggccaagtccatccaccatgcccgtgtgctgatccgccagcgccatatcagggt 439
>ref|XM_479224.1| Oryza sativa (japonica cultivar-group), mRNA Length = 216 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Plus Query: 414 agggttggcaggcagatcgtcaatgtcccctcattcatggtgagggttgaatctgagaag 473 ||||| || |||||| ||||||| | || |||||||| |||||| |||| ||||||||| Sbjct: 7 agggtgggaaggcagctcgtcaacattccatcattcattgtgaggcttgagtctgagaag 66 Query: 474 cacattgacttctc 487 ||||| | |||||| Sbjct: 67 cacatcgccttctc 80
>ref|XM_959140.1| Neurospora crassa OR74A hypothetical protein (NCU01949.1) partial mRNA Length = 573 Score = 50.1 bits (25), Expect = 0.007 Identities = 64/77 (83%) Strand = Plus / Plus Query: 369 aagtccatccaccatgcccgtgtcttgatcaggcaacgccacatcagggttggcaggcag 428 |||||||||||||| || |||||| | ||| | || ||||||||| | || |||| |||| Sbjct: 352 aagtccatccaccacgctcgtgtcctcatccgccagcgccacatccgcgtcggcaagcag 411 Query: 429 atcgtcaatgtcccctc 445 |||||||| || ||||| Sbjct: 412 atcgtcaacgttccctc 428
>ref|XM_329138.1| Neurospora crassa OR74A hypothetical protein (NCU01949.1) partial mRNA Length = 573 Score = 50.1 bits (25), Expect = 0.007 Identities = 64/77 (83%) Strand = Plus / Plus Query: 369 aagtccatccaccatgcccgtgtcttgatcaggcaacgccacatcagggttggcaggcag 428 |||||||||||||| || |||||| | ||| | || ||||||||| | || |||| |||| Sbjct: 352 aagtccatccaccacgctcgtgtcctcatccgccagcgccacatccgcgtcggcaagcag 411 Query: 429 atcgtcaatgtcccctc 445 |||||||| || ||||| Sbjct: 412 atcgtcaacgttccctc 428
>ref|XM_455020.1| Kluyveromyces lactis NRRL Y-1140, KLLA0E23749g predicted mRNA Length = 741 Score = 50.1 bits (25), Expect = 0.007 Identities = 49/57 (85%) Strand = Plus / Minus Query: 429 atcgtcaatgtcccctcattcatggtgagggttgaatctgagaagcacattgacttc 485 |||||||| |||| || |||||||| || | |||||||||||||||||||||||| Sbjct: 156 atcgtcaacatcccatctttcatggtcagattggaatctgagaagcacattgacttc 100
>ref|XM_455021.1| Kluyveromyces lactis NRRL Y-1140, KLLA0E23760g predicted mRNA Length = 567 Score = 50.1 bits (25), Expect = 0.007 Identities = 49/57 (85%) Strand = Plus / Plus Query: 429 atcgtcaatgtcccctcattcatggtgagggttgaatctgagaagcacattgacttc 485 |||||||| |||| || |||||||| || | |||||||||||||||||||||||| Sbjct: 418 atcgtcaacatcccatctttcatggtcagattggaatctgagaagcacattgacttc 474
>ref|XM_749816.1| Aspergillus fumigatus Af293 cytosolic small ribosomal subunit S9 (Afu3g06970) partial mRNA Length = 714 Score = 50.1 bits (25), Expect = 0.007 Identities = 94/117 (80%) Strand = Plus / Plus Query: 369 aagtccatccaccatgcccgtgtcttgatcaggcaacgccacatcagggttggcaggcag 428 |||||||| ||||| || |||||| |||||| ||| || |||||| | || |||| |||| Sbjct: 490 aagtccattcaccacgctcgtgtcctgatcaagcagcgtcacatccgtgtcggcaagcag 549 Query: 429 atcgtcaatgtcccctcattcatggtgagggttgaatctgagaagcacattgacttc 485 |||||||| || || || | |||||| | |||| ||| |||||||||| |||||| Sbjct: 550 atcgtcaacgtgccttcctacatggttcgccttgactctcagaagcacatcgacttc 606
>emb|CR382125.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome E of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2234072 Score = 50.1 bits (25), Expect = 0.007 Identities = 49/57 (85%) Strand = Plus / Minus Query: 429 atcgtcaatgtcccctcattcatggtgagggttgaatctgagaagcacattgacttc 485 |||||||| |||| || |||||||| || | |||||||||||||||||||||||| Sbjct: 2103878 atcgtcaacatcccatctttcatggtcagattggaatctgagaagcacattgacttc 2103822
>gb|DQ387872.1| Neurospora crassa strain Adiopodoume-1 Srp interval sequence Length = 33499 Score = 50.1 bits (25), Expect = 0.007 Identities = 64/77 (83%) Strand = Plus / Plus Query: 369 aagtccatccaccatgcccgtgtcttgatcaggcaacgccacatcagggttggcaggcag 428 |||||||||||||| || |||||| | ||| | || ||||||||| | || |||| |||| Sbjct: 26030 aagtccatccaccacgctcgtgtcctcatccgccagcgccacatccgcgtcggcaagcag 26089 Query: 429 atcgtcaatgtcccctc 445 |||||||| || ||||| Sbjct: 26090 atcgtcaacgttccctc 26106
>gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome V, complete sequence Length = 1519138 Score = 50.1 bits (25), Expect = 0.007 Identities = 55/65 (84%) Strand = Plus / Plus Query: 420 ggcaggcagatcgtcaatgtcccctcattcatggtgagggttgaatctgagaagcacatt 479 |||| |||||| ||||| ||||| || ||||||||||| | || || |||||||||||| Sbjct: 162757 ggcaagcagattgtcaacgtcccatccttcatggtgagattggactccgagaagcacatt 162816 Query: 480 gactt 484 ||||| Sbjct: 162817 gactt 162821
>ref|NM_209959.1| Eremothecium gossypii AEL255Wp (AEL255W), mRNA Length = 567 Score = 50.1 bits (25), Expect = 0.007 Identities = 55/65 (84%) Strand = Plus / Plus Query: 420 ggcaggcagatcgtcaatgtcccctcattcatggtgagggttgaatctgagaagcacatt 479 |||| |||||| ||||| ||||| || ||||||||||| | || || |||||||||||| Sbjct: 409 ggcaagcagattgtcaacgtcccatccttcatggtgagattggactccgagaagcacatt 468 Query: 480 gactt 484 ||||| Sbjct: 469 gactt 473
>gb|BC076696.1| Xenopus tropicalis ribosomal protein S9, mRNA (cDNA clone MGC:79756 IMAGE:6984164), complete cds Length = 780 Score = 48.1 bits (24), Expect = 0.027 Identities = 99/124 (79%) Strand = Plus / Plus Query: 364 tggcaaagtccatccaccatgcccgtgtcttgatcaggcaacgccacatcagggttggca 423 |||||||||||||||| |||||||| || ||||||| ||| | |||||| | ||| ||| Sbjct: 384 tggcaaagtccatccatcatgcccgcgtgctgatcagacaaaggcacatccgtgttcgca 443 Query: 424 ggcagatcgtcaatgtcccctcattcatggtgagggttgaatctgagaagcacattgact 483 |||| | || || |||| |||||||| ||| | | || ||| |||||||||| |||| Sbjct: 444 agcaggtggttaacatcccatcattcattgtgcgtctggactctcagaagcacatcgact 503 Query: 484 tctc 487 |||| Sbjct: 504 tctc 507
>ref|NM_001006812.1| Xenopus tropicalis ribosomal protein S9 (rps9), mRNA Length = 780 Score = 48.1 bits (24), Expect = 0.027 Identities = 99/124 (79%) Strand = Plus / Plus Query: 364 tggcaaagtccatccaccatgcccgtgtcttgatcaggcaacgccacatcagggttggca 423 |||||||||||||||| |||||||| || ||||||| ||| | |||||| | ||| ||| Sbjct: 384 tggcaaagtccatccatcatgcccgcgtgctgatcagacaaaggcacatccgtgttcgca 443 Query: 424 ggcagatcgtcaatgtcccctcattcatggtgagggttgaatctgagaagcacattgact 483 |||| | || || |||| |||||||| ||| | | || ||| |||||||||| |||| Sbjct: 444 agcaggtggttaacatcccatcattcattgtgcgtctggactctcagaagcacatcgact 503 Query: 484 tctc 487 |||| Sbjct: 504 tctc 507
>emb|X96613.1|PASU12 P.anserina su12 gene Length = 1379 Score = 48.1 bits (24), Expect = 0.027 Identities = 84/104 (80%) Strand = Plus / Plus Query: 333 cgccttcagactcttgtcttcaaggctggcatggcaaagtccatccaccatgcccgtgtc 392 ||||| |||||||| |||| |||| ||| |||| |||||||||||||| || |||||| Sbjct: 922 cgcctccagactctcgtctacaagctcggcctggccaagtccatccaccacgctcgtgtc 981 Query: 393 ttgatcaggcaacgccacatcagggttggcaggcagatcgtcaa 436 | ||| | || || |||||| | || |||| |||||||||||| Sbjct: 982 cttatccgccagcgtcacatccgtgtcggcaagcagatcgtcaa 1025
>gb|AY193430.1| Lactuca saligna genotype PI491204 40S ribosomal protein S9 gene, partial cds Length = 459 Score = 48.1 bits (24), Expect = 0.027 Identities = 39/44 (88%) Strand = Plus / Minus Query: 447 ttcatggtgagggttgaatctgagaagcacattgacttctcact 490 |||||||||||||| || || ||||||||||||| |||||||| Sbjct: 139 ttcatggtgagggtggattcacagaagcacattgatttctcact 96
>gb|AY193429.1| Lactuca saligna genotype CGN9311 40S ribosomal protein S9 gene, partial cds Length = 516 Score = 48.1 bits (24), Expect = 0.027 Identities = 39/44 (88%) Strand = Plus / Minus Query: 447 ttcatggtgagggttgaatctgagaagcacattgacttctcact 490 |||||||||||||| || || ||||||||||||| |||||||| Sbjct: 139 ttcatggtgagggtggattcacagaagcacattgatttctcact 96
>gb|AY193428.1| Lactuca saligna genotype US93UC10 40S ribosomal protein S9 gene, partial cds Length = 516 Score = 48.1 bits (24), Expect = 0.027 Identities = 39/44 (88%) Strand = Plus / Minus Query: 447 ttcatggtgagggttgaatctgagaagcacattgacttctcact 490 |||||||||||||| || || ||||||||||||| |||||||| Sbjct: 139 ttcatggtgagggtggattcacagaagcacattgatttctcact 96
>gb|AY193427.1| Lactuca serriola genotype W66336A 40S ribosomal protein S9 gene, partial cds Length = 520 Score = 48.1 bits (24), Expect = 0.027 Identities = 39/44 (88%) Strand = Plus / Minus Query: 447 ttcatggtgagggttgaatctgagaagcacattgacttctcact 490 |||||||||||||| || || ||||||||||||| |||||||| Sbjct: 139 ttcatggtgagggtggactcacagaagcacattgatttctcact 96
>gb|AY193426.1| Lactuca sativa cultivar Mariska 40S ribosomal protein S9 gene, partial cds Length = 519 Score = 48.1 bits (24), Expect = 0.027 Identities = 39/44 (88%) Strand = Plus / Minus Query: 447 ttcatggtgagggttgaatctgagaagcacattgacttctcact 490 |||||||||||||| || || ||||||||||||| |||||||| Sbjct: 139 ttcatggtgagggtggattcacagaagcacattgatttctcact 96
>gb|AY193425.1| Lactuca sativa cultivar Calmar 40S ribosomal protein S9 gene, partial cds Length = 519 Score = 48.1 bits (24), Expect = 0.027 Identities = 39/44 (88%) Strand = Plus / Minus Query: 447 ttcatggtgagggttgaatctgagaagcacattgacttctcact 490 |||||||||||||| || || ||||||||||||| |||||||| Sbjct: 139 ttcatggtgagggtggattcacagaagcacattgatttctcact 96
>gb|AY193424.1| Lactuca sativa cultivar Diana 40S ribosomal protein S9 gene, partial cds Length = 516 Score = 48.1 bits (24), Expect = 0.027 Identities = 39/44 (88%) Strand = Plus / Minus Query: 447 ttcatggtgagggttgaatctgagaagcacattgacttctcact 490 |||||||||||||| || || ||||||||||||| |||||||| Sbjct: 139 ttcatggtgagggtggattcacagaagcacattgatttctcact 96
>ref|XM_613451.2| PREDICTED: Bos taurus similar to 40S ribosomal protein S9, transcript variant 1 (LOC533892), mRNA Length = 946 Score = 46.1 bits (23), Expect = 0.11 Identities = 47/55 (85%) Strand = Plus / Plus Query: 364 tggcaaagtccatccaccatgcccgtgtcttgatcaggcaacgccacatcagggt 418 |||| |||||||||||||| |||||||| | ||| | || |||||||||||||| Sbjct: 648 tggccaagtccatccaccacgcccgtgtgctcatccgccagcgccacatcagggt 702
>ref|XM_872766.1| PREDICTED: Bos taurus similar to 40S ribosomal protein S9, transcript variant 9 (LOC533892), mRNA Length = 766 Score = 46.1 bits (23), Expect = 0.11 Identities = 47/55 (85%) Strand = Plus / Plus Query: 364 tggcaaagtccatccaccatgcccgtgtcttgatcaggcaacgccacatcagggt 418 |||| |||||||||||||| |||||||| | ||| | || |||||||||||||| Sbjct: 468 tggccaagtccatccaccacgcccgtgtgctcatccgccagcgccacatcagggt 522
>ref|XM_864261.1| PREDICTED: Bos taurus similar to 40S ribosomal protein S9, transcript variant 3 (LOC533892), mRNA Length = 738 Score = 46.1 bits (23), Expect = 0.11 Identities = 47/55 (85%) Strand = Plus / Plus Query: 364 tggcaaagtccatccaccatgcccgtgtcttgatcaggcaacgccacatcagggt 418 |||| |||||||||||||| |||||||| | ||| | || |||||||||||||| Sbjct: 440 tggccaagtccatccaccacgcccgtgtgctcatccgccagcgccacatcagggt 494
>gb|AY221154.1| Volvariella volvacea clone Cor4 cold-induced gene mRNA, partial sequence Length = 618 Score = 46.1 bits (23), Expect = 0.11 Identities = 41/47 (87%) Strand = Plus / Plus Query: 396 atcaggcaacgccacatcagggttggcaggcagatcgtcaatgtccc 442 ||||||||||| |||||| | ||||||| ||| || ||||||||||| Sbjct: 483 atcaggcaacgacacatccgtgttggcaagcaaattgtcaatgtccc 529
>emb|BX841622.1|CNS09YLT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB2ZF05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 876 Score = 46.1 bits (23), Expect = 0.11 Identities = 41/47 (87%) Strand = Plus / Plus Query: 69 gagaaggagcgtctggatgcagaactaaagctggtgggtgagtatgg 115 |||||||||||||| ||| | ||| | |||||||| ||||||||||| Sbjct: 104 gagaaggagcgtcttgattctgaattgaagctggttggtgagtatgg 150
>emb|CR760722.2| Xenopus tropicalis finished cDNA, clone TGas113k07 Length = 683 Score = 44.1 bits (22), Expect = 0.43 Identities = 43/50 (86%) Strand = Plus / Plus Query: 364 tggcaaagtccatccaccatgcccgtgtcttgatcaggcaacgccacatc 413 |||||||||||||||| |||||||| || ||||||| ||| | |||||| Sbjct: 361 tggcaaagtccatccatcatgcccgcgtgctgatcagacaaaggcacatc 410
>gb|DQ332190.1| Synthetic construct Saccharomyces cerevisiae clone FLH201304.01X RPS9A gene, complete sequence Length = 1095 Score = 44.1 bits (22), Expect = 0.43 Identities = 40/46 (86%) Strand = Plus / Plus Query: 439 tcccctcattcatggtgagggttgaatctgagaagcacattgactt 484 ||||||| |||||||| || | || |||||||||||||||||||| Sbjct: 929 tcccctctttcatggtcagattggactctgagaagcacattgactt 974
>gb|U41849.1|SCU41849 Saccharomyces cerevisiae chromosome XVI, left arm, cosmid 8204 Length = 35868 Score = 44.1 bits (22), Expect = 0.43 Identities = 40/46 (86%) Strand = Plus / Plus Query: 439 tcccctcattcatggtgagggttgaatctgagaagcacattgactt 484 ||||||| |||||||| || | || |||||||||||||||||||| Sbjct: 18862 tcccctctttcatggtcagattggactctgagaagcacattgactt 18907
>dbj|D00724.1|YSCYS11A Saccharomyces cerevisiae YS11 gene, complete cds Length = 1893 Score = 44.1 bits (22), Expect = 0.43 Identities = 40/46 (86%) Strand = Plus / Plus Query: 439 tcccctcattcatggtgagggttgaatctgagaagcacattgactt 484 ||||||| |||||||| || | || |||||||||||||||||||| Sbjct: 1454 tcccctctttcatggtcagattggactctgagaagcacattgactt 1499
>gb|AE017345.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 5, complete sequence Length = 1507550 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Minus Query: 396 atcaggcaacgccacatcagggttggcaggcagatcgtcaa 436 ||||||||| | |||||| | ||||||| |||||||||||| Sbjct: 585190 atcaggcaaaggcacatccgagttggcaagcagatcgtcaa 585150
>ref|XM_872464.1| PREDICTED: Bos taurus similar to 40S ribosomal protein S9, transcript variant 7 (LOC533892), mRNA Length = 740 Score = 42.1 bits (21), Expect = 1.7 Identities = 45/53 (84%) Strand = Plus / Plus Query: 364 tggcaaagtccatccaccatgcccgtgtcttgatcaggcaacgccacatcagg 416 |||| |||||||||||||| |||||||| | ||| | || |||||||||||| Sbjct: 440 tggccaagtccatccaccacgcccgtgtgctcatccgccagcgccacatcagg 492
>ref|XM_872355.1| PREDICTED: Bos taurus similar to 40S ribosomal protein S9, transcript variant 6 (LOC533892), mRNA Length = 727 Score = 42.1 bits (21), Expect = 1.7 Identities = 45/53 (84%) Strand = Plus / Plus Query: 364 tggcaaagtccatccaccatgcccgtgtcttgatcaggcaacgccacatcagg 416 |||| |||||||||||||| |||||||| | ||| | || |||||||||||| Sbjct: 440 tggccaagtccatccaccacgcccgtgtgctcatccgccagcgccacatcagg 492
>gb|BC073375.1| Xenopus laevis MGC80804 protein, mRNA (cDNA clone MGC:80804 IMAGE:5513712), complete cds Length = 890 Score = 42.1 bits (21), Expect = 1.7 Identities = 33/37 (89%) Strand = Plus / Plus Query: 364 tggcaaagtccatccaccatgcccgtgtcttgatcag 400 |||| ||||||||||| ||||||||||| ||||||| Sbjct: 570 tggccaagtccatccatcatgcccgtgtgctgatcag 606
>ref|XM_570885.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNE02160) partial mRNA Length = 674 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 396 atcaggcaacgccacatcagggttggcaggcagatcgtcaa 436 ||||||||| | |||||| | ||||||| |||||||||||| Sbjct: 400 atcaggcaaaggcacatccgagttggcaagcagatcgtcaa 440
>ref|XM_449630.1| Candida glabrata CBS138 hypothetical protein (CAGL0M06501g) partial mRNA Length = 585 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 465 tctgagaagcacattgacttc 485 ||||||||||||||||||||| Sbjct: 454 tctgagaagcacattgacttc 474
>gb|BC041242.1| Xenopus laevis ribosomal protein S9, mRNA (cDNA clone MGC:52774 IMAGE:4684220), complete cds Length = 698 Score = 42.1 bits (21), Expect = 1.7 Identities = 33/37 (89%) Strand = Plus / Plus Query: 364 tggcaaagtccatccaccatgcccgtgtcttgatcag 400 |||| ||||||||||| ||||||||||| ||||||| Sbjct: 380 tggccaagtccatccatcatgcccgtgtgctgatcag 416
>emb|CR380959.1| Candida glabrata strain CBS138 chromosome M complete sequence Length = 1400893 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 465 tctgagaagcacattgacttc 485 ||||||||||||||||||||| Sbjct: 674070 tctgagaagcacattgacttc 674090
>gb|AF402817.1| Ictalurus punctatus 40S ribosomal protein S9 mRNA, complete cds Length = 677 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 105 ggtgagtatggactgaggtgcaagcgtgagctctggagggt 145 ||||||||||| |||||| ||||||||| |||||||||| Sbjct: 111 ggtgagtatggtctgaggaataagcgtgaggtctggagggt 151
>gb|AC159021.2| Pan troglodytes BAC clone CH251-508C8 from chromosome unknown, complete sequence Length = 240827 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 442 cctcattcatggtgagggttg 462 ||||||||||||||||||||| Sbjct: 50869 cctcattcatggtgagggttg 50849
>gb|DQ066325.1| Ixodes scapularis isolate IS-6-12L-111 40S ribosomal protein S9 mRNA, complete cds Length = 579 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 468 gagaagcacattgacttctcactga 492 |||||||||||||||||||| |||| Sbjct: 457 gagaagcacattgacttctcgctga 481
>gb|DQ213062.1| Taeniopygia guttata clone 0033P0001B11 40S ribosomal protein S9-like mRNA, complete sequence Length = 751 Score = 40.1 bits (20), Expect = 6.7 Identities = 47/56 (83%) Strand = Plus / Plus Query: 333 cgccttcagactcttgtcttcaaggctggcatggcaaagtccatccaccatgcccg 388 ||||| ||||||| ||||||||| ||| |||| |||||||||||||| ||||| Sbjct: 370 cgcctgcagactcaggtcttcaagctgggcctggccaagtccatccaccacgcccg 425
>gb|AY769323.1| Bombyx mori ribosomal protein S9 (RpS9) mRNA, complete cds Length = 686 Score = 40.1 bits (20), Expect = 6.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 351 ttcaaggctggcatggcaaagtccatccaccatgcc 386 ||||| |||||| |||| ||||||||||| |||||| Sbjct: 400 ttcaaagctggcctggcgaagtccatccatcatgcc 435
>gb|BC080433.1| Xenopus laevis MGC86539 protein, mRNA (cDNA clone MGC:86539 IMAGE:3399194), complete cds Length = 2281 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 263 gctccttgctgagggccagg 282 |||||||||||||||||||| Sbjct: 661 gctccttgctgagggccagg 642
>ref|XM_872555.1| PREDICTED: Bos taurus similar to 40S ribosomal protein S9, transcript variant 8 (LOC533892), mRNA Length = 910 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 364 tggcaaagtccatccaccatgcccgtgt 391 |||| |||||||||||||| |||||||| Sbjct: 440 tggccaagtccatccaccacgcccgtgt 467
>ref|XM_872145.1| PREDICTED: Bos taurus similar to 40S ribosomal protein S9, transcript variant 4 (LOC533892), mRNA Length = 1356 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 364 tggcaaagtccatccaccatgcccgtgt 391 |||| |||||||||||||| |||||||| Sbjct: 440 tggccaagtccatccaccacgcccgtgt 467
>gb|AC110744.6| Mus musculus chromosome 8, clone RP23-307G24, complete sequence Length = 183023 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 460 ttgaatctgagaagcacatt 479 |||||||||||||||||||| Sbjct: 72477 ttgaatctgagaagcacatt 72458
>gb|AC145392.2| Mus musculus BAC clone RP24-171E5 from chromosome Y, complete sequence Length = 162238 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 343 ctcttgtcttcaaggctggc 362 |||||||||||||||||||| Sbjct: 59578 ctcttgtcttcaaggctggc 59559
>ref|XM_447035.1| Candida glabrata CBS138, CAGL0H05511g partial mRNA Length = 585 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 465 tctgagaagcacattgactt 484 |||||||||||||||||||| Sbjct: 454 tctgagaagcacattgactt 473
>emb|CR380954.1| Candida glabrata strain CBS138 chromosome H complete sequence Length = 1050361 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 465 tctgagaagcacattgactt 484 |||||||||||||||||||| Sbjct: 533875 tctgagaagcacattgactt 533856
>gb|AC164558.2| Mus musculus BAC clone RP23-238F5 from chromosome 16, complete sequence Length = 186421 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 463 aatctgagaagcacattgacttct 486 |||||||| ||||||||||||||| Sbjct: 42029 aatctgagtagcacattgacttct 42052
>gb|AC165282.2| Mus musculus BAC clone RP24-465P22 from chromosome 16, complete sequence Length = 185134 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 463 aatctgagaagcacattgacttct 486 |||||||| ||||||||||||||| Sbjct: 180135 aatctgagtagcacattgacttct 180158
>emb|AL022299.1|SPBC29A3 S.pombe chromosome II cosmid c29A3 Length = 42770 Score = 40.1 bits (20), Expect = 6.7 Identities = 62/76 (81%) Strand = Plus / Plus Query: 364 tggcaaagtccatccaccatgcccgtgtcttgatcaggcaacgccacatcagggttggca 423 |||| ||||||||||| ||||| ||||| |||||| ||||| |||||| | ||||| | Sbjct: 23372 tggctaagtccatccatcatgcacgtgtgttgatcttccaacgtcacatccgtgttggta 23431 Query: 424 ggcagatcgtcaatgt 439 ||| || |||||||| Sbjct: 23432 agcaaattgtcaatgt 23447
>emb|BX511086.5| Zebrafish DNA sequence from clone DKEY-38P8 in linkage group 7, complete sequence Length = 228170 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 463 aatctgagaagcacattgac 482 |||||||||||||||||||| Sbjct: 100394 aatctgagaagcacattgac 100375
>gb|AC009470.4| Homo sapiens BAC clone RP11-125K7 from 11, complete sequence Length = 162511 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 301 ttgccctgactgctgagaac 320 |||||||||||||||||||| Sbjct: 14871 ttgccctgactgctgagaac 14890
>ref|NM_001021744.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPBC29A3.12), partial mRNA Length = 579 Score = 40.1 bits (20), Expect = 6.7 Identities = 62/76 (81%) Strand = Plus / Plus Query: 364 tggcaaagtccatccaccatgcccgtgtcttgatcaggcaacgccacatcagggttggca 423 |||| ||||||||||| ||||| ||||| |||||| ||||| |||||| | ||||| | Sbjct: 353 tggctaagtccatccatcatgcacgtgtgttgatcttccaacgtcacatccgtgttggta 412 Query: 424 ggcagatcgtcaatgt 439 ||| || |||||||| Sbjct: 413 agcaaattgtcaatgt 428
>gb|AC006584.12|AC006584 Mus musculus BAC GSMB-407A4 (Genome Systems Mouse BAC Library) complete sequence Length = 160288 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 343 ctcttgtcttcaaggctggc 362 |||||||||||||||||||| Sbjct: 43103 ctcttgtcttcaaggctggc 43122
>dbj|AB029515.1| Schizosaccharomyces pombe mRNA for ribosomal protein S9 homolog, partial cds Length = 637 Score = 40.1 bits (20), Expect = 6.7 Identities = 62/76 (81%) Strand = Plus / Plus Query: 364 tggcaaagtccatccaccatgcccgtgtcttgatcaggcaacgccacatcagggttggca 423 |||| ||||||||||| ||||| ||||| |||||| ||||| |||||| | ||||| | Sbjct: 344 tggctaagtccatccatcatgcacgtgtgttgatcttccaacgtcacatccgtgttggta 403 Query: 424 ggcagatcgtcaatgt 439 ||| || |||||||| Sbjct: 404 agcaaattgtcaatgt 419
>dbj|AP001266.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-770G2, complete sequence Length = 175872 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 301 ttgccctgactgctgagaac 320 |||||||||||||||||||| Sbjct: 106983 ttgccctgactgctgagaac 107002 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,847,237 Number of Sequences: 3902068 Number of extensions: 3847237 Number of successful extensions: 78088 Number of sequences better than 10.0: 111 Number of HSP's better than 10.0 without gapping: 115 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 77649 Number of HSP's gapped (non-prelim): 397 length of query: 493 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 471 effective length of database: 17,147,199,772 effective search space: 8076331092612 effective search space used: 8076331092612 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
