ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags11m14
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1K0971_MOUSE (Q922E6) Protein KIAA0971 homolog 33 0.66
2ASPM_ATEGE (P62284) Abnormal spindle-like microcephaly-associate... 30 4.2
3ASPM_AOTVO (P62283) Abnormal spindle-like microcephaly-associate... 30 4.2
4Y1375_METJA (Q58770) Hypothetical protein MJ1375 30 4.2
5ASPM_SAIBB (P62296) Abnormal spindle-like microcephaly-associate... 30 4.2
6ASPM_SAGLB (P62295) Abnormal spindle-like microcephaly-associate... 30 5.6
7ALG10_YEAST (P50076) Alpha-1,2 glucosyltransferase ALG10 (EC 2.4... 30 7.2

>K0971_MOUSE (Q922E6) Protein KIAA0971 homolog|
          Length = 689

 Score = 33.1 bits (74), Expect = 0.66
 Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
 Frame = -2

Query: 591 GRTLKCKHKVY--RPCLEISRQSYKQAYIKK*VLNMLERQPDMPILEPLAKLLQGSTGSE 418
           G T K  HK++    CL++   +YK  +I    L +   QP+  + E L++LL+G    E
Sbjct: 517 GDTEKNIHKLHVLNTCLKLDESTYKSVHIPLPQLPLSASQPNEKLAEVLSRLLEG----E 572

Query: 417 GKF 409
           G+F
Sbjct: 573 GRF 575



to top

>ASPM_ATEGE (P62284) Abnormal spindle-like microcephaly-associated protein|
           homolog (Fragment)
          Length = 1564

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 15/46 (32%), Positives = 24/46 (52%)
 Frame = +1

Query: 226 WHLQSRNMAYKVF*GANTWYMIDKSFCFSVFIIVACVIFIRELFRC 363
           WHL+ R    K      +WY + K     V+ + +CV+ I++ FRC
Sbjct: 94  WHLRKRAKEEKSAIVIQSWYRMHKQLRKYVY-VRSCVVIIQKRFRC 138



to top

>ASPM_AOTVO (P62283) Abnormal spindle-like microcephaly-associated protein|
            homolog
          Length = 3473

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 15/46 (32%), Positives = 24/46 (52%)
 Frame = +1

Query: 226  WHLQSRNMAYKVF*GANTWYMIDKSFCFSVFIIVACVIFIRELFRC 363
            WHL+ R    K      +WY + K     V+ + +CV+ I++ FRC
Sbjct: 1452 WHLRKRAKEEKSAIVIQSWYRMHKQLQKYVY-VRSCVVIIQKRFRC 1496



to top

>Y1375_METJA (Q58770) Hypothetical protein MJ1375|
          Length = 415

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 17/66 (25%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
 Frame = +2

Query: 320 SLLHVSFLSENYLGVIK*SELVSRSLFQVSNFPSLPVLPCSNLAKGSKIGMSGCLSN-MF 496
           +++ +S +   + G+   S L+SR +F  ++  S+P+LP  +  K   +   G + N +F
Sbjct: 242 NIVIMSIMGGFWSGIYGYSSLISRGIFMFASAVSIPLLPRISKTKDLSLLKEGIIQNTIF 301

Query: 497 KTYFLI 514
            + F+I
Sbjct: 302 SSIFVI 307



to top

>ASPM_SAIBB (P62296) Abnormal spindle-like microcephaly-associated protein|
            homolog
          Length = 3469

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 15/46 (32%), Positives = 24/46 (52%)
 Frame = +1

Query: 226  WHLQSRNMAYKVF*GANTWYMIDKSFCFSVFIIVACVIFIRELFRC 363
            WHL+ R    K      +WY + K     V+ + +CV+ I++ FRC
Sbjct: 1447 WHLRKRAKEEKSAIVIQSWYRMHKQLRKYVY-VRSCVVIIQKRFRC 1491



to top

>ASPM_SAGLB (P62295) Abnormal spindle-like microcephaly-associated protein|
           homolog (Fragment)
          Length = 1527

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = +1

Query: 226 WHLQSRNMAYKVF*GANTWYMIDKSFCFSVFIIVACVIFIRELFRC 363
           WHL+ R    K      +WY + K      ++  ACV+ I++ FRC
Sbjct: 49  WHLRKRAKEEKSAIVIQSWYRMHKQLQKYAYVR-ACVVIIQKRFRC 93



to top

>ALG10_YEAST (P50076) Alpha-1,2 glucosyltransferase ALG10 (EC 2.4.1.-)|
           (Alpha-2-glucosyltransferase ALG10)
           (Dolichyl-phosphoglucose-dependent glucosyltransferase
           ALG10) (Asparagine-linked glycosylation protein 10)
          Length = 525

 Score = 29.6 bits (65), Expect = 7.2
 Identities = 13/42 (30%), Positives = 25/42 (59%)
 Frame = +3

Query: 384 YLVPYFRYQIFLHYRCYPVVIWLKVPKLACQAASLTCSKLIF 509
           Y++PYF ++IF+   C P++  LK  K      +++ +K +F
Sbjct: 449 YILPYFFWRIFITCSCEPLIKDLKPAKEGENPITISSTKRLF 490


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 82,882,870
Number of Sequences: 219361
Number of extensions: 1623977
Number of successful extensions: 2933
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2875
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2929
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5481822624
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top