ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags11m14
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC012301.5|AC012301 Homo sapiens chromosome 18, clone RP11-38... 44 0.53
2ref|XM_948699.1| Theileria annulata strain Ankara hypothetical p... 42 2.1
3emb|AL583824.16| Human DNA sequence from clone RP11-79M19 on chr... 42 2.1
4emb|AL832835.1|HSM804146 Homo sapiens mRNA; cDNA DKFZp667P1024 (... 42 2.1
5gb|AC122178.2| Homo sapiens chromosome 3 clone RP11-340I14, comp... 42 2.1
6emb|BX649332.3| Zebrafish DNA sequence from clone CH211-243P21 i... 42 2.1
7gb|AC169520.2| Mus musculus BAC clone RP23-35C6 from chromosome ... 40 8.3
8gb|AC158791.4| Mus musculus chromosome 1, clone RP23-247C6, comp... 40 8.3
9gb|AC166063.4| Mus musculus BAC clone RP23-21L22 from chromosome... 40 8.3
10gb|AE017308.1| Mycoplasma mobile 163K complete genome 40 8.3
11ref|XM_866972.1| PREDICTED: Bos taurus similar to translocator o... 40 8.3
12gb|AC150412.2| Branchiostoma floridae clone CH302-60C21, complet... 40 8.3
13gb|AC162920.2| Mus musculus BAC clone RP23-357C16 from chromosom... 40 8.3
14emb|BX936415.10| Zebrafish DNA sequence from clone CH211-242N18 ... 40 8.3
15gb|AC132450.3| Mus musculus BAC clone RP23-187N8 from chromosome... 40 8.3
16gb|AC133646.4| Mus musculus BAC clone RP23-254F11 from chromosom... 40 8.3
17gb|AC124506.4| Mus musculus BAC clone RP23-425E23 from chromosom... 40 8.3
18ref|XM_722210.1| Plasmodium yoelii yoelii str. 17XNL hypothetica... 40 8.3
19gb|AC105325.11| Mus musculus chromosome 1, clone RP24-455G23, co... 40 8.3
20emb|AL161740.16| Human DNA sequence from clone RP6-239D12 on chr... 40 8.3
21emb|AL138755.13| Human DNA sequence from clone RP11-48M17 on chr... 40 8.3
22emb|AL033539.18|HS309H15 Human DNA sequence from clone RP1-309H1... 40 8.3
23emb|AL671005.7| Mouse DNA sequence from clone RP23-76J17 on chro... 40 8.3
24gb|AC150418.2| Branchiostoma floridae clone CH302-67G11, complet... 40 8.3
25gb|AC069524.18| Homo sapiens 3 BAC RP11-181C6 (Roswell Park Canc... 40 8.3
26gb|AC079628.20| Homo sapiens 12 BAC RP11-688K16 (Roswell Park Ca... 40 8.3
27emb|BX005429.13| Zebrafish DNA sequence from clone DKEY-85K15 in... 40 8.3
28gb|AC010008.5| Drosophila melanogaster 3L BAC RP98-13N15 (Roswel... 40 8.3
29gb|AC093436.2| Drosophila melanogaster 3L BAC RP98-1O14 (Roswell... 40 8.3
30tpg|BK002103.1| TPA: TPA_inf: Drosophila melanogaster HDC09865 (... 40 8.3
31gb|AC008180.15| Homo sapiens 3 BAC RP11-292L5 (Roswell Park Canc... 40 8.3
32gb|AC104656.3| Homo sapiens BAC clone RP11-547J14 from 4, comple... 40 8.3
33gb|AF269331.1|AF269331 Staphylococcus epidermidis strain SR1 clo... 40 8.3
34gb|AF185978.1|AF185978 Gerronema chrysophyllum small subunit rib... 40 8.3
35gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chr... 40 8.3
36gb|AC010727.6|AC010727 Homo sapiens BAC clone RP11-224E16 from 3... 40 8.3
37gb|AC114804.5| Homo sapiens BAC clone RP11-1181A2 from 2, comple... 40 8.3
38gb|AC068718.6| Homo sapiens BAC clone RP11-123G24 from 2, comple... 40 8.3
39gb|AF269959.1|AF269959 Staphylococcus epidermidis strain SR1 clo... 40 8.3
40emb|BX324159.6| Zebrafish DNA sequence from clone CH211-10O1 in ... 40 8.3
41gb|CP000029.1| Staphylococcus epidermidis RP62A, complete genome 40 8.3
42gb|AC149314.2| Phakopsora pachyrhizi clone JGIAFNA-101K12, compl... 40 8.3
43gb|AC152450.4| Mus musculus BAC clone RP24-342M21 from 18, compl... 40 8.3
44emb|CR391915.9| Zebrafish DNA sequence from clone CH211-130O18 i... 40 8.3
45gb|AE003540.3| Drosophila melanogaster chromosome 3L, section 45... 40 8.3
46gb|AC148372.3| Carollia perspicillata clone 102I5, complete sequ... 40 8.3
47gb|AE015929.1| Staphylococcus epidermidis ATCC 12228, complete g... 40 8.3
48gb|AE016823.1| Leptospira interrogans serovar Copenhageni str. F... 40 8.3
49dbj|AK114209.1| Ciona intestinalis cDNA, clone:cicl046b12, full ... 40 8.3
50emb|AL929413.13| Mouse DNA sequence from clone RP24-215D6 on chr... 40 8.3
51gb|AC149349.2| Phakopsora pachyrhizi clone JGIAFNA-33E17, comple... 40 8.3
52dbj|AP005203.3| Homo sapiens genomic DNA, chromosome 18 clone:RP... 40 8.3
53gb|DP000018.1| Carollia perspicillata target 1 genomic scaffold 40 8.3
54gb|AF434658.1| Leptospira interrogans putative protease (ppa), h... 40 8.3 
>gb|AC012301.5|AC012301 Homo sapiens chromosome 18, clone RP11-383D22, complete sequence
          Length = 211466

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 507    ttttaatataagcttgtttata 528
              ||||||||||||||||||||||
Sbjct: 185964 ttttaatataagcttgtttata 185985
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>ref|XM_948699.1| Theileria annulata strain Ankara hypothetical protein (TA16465)
           partial mRNA
          Length = 2925

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 569 tgtttacattttaaagttctt 589
           |||||||||||||||||||||
Sbjct: 423 tgtttacattttaaagttctt 443
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>emb|AL583824.16| Human DNA sequence from clone RP11-79M19 on chromosome 10 Contains part
             of the GPRK5 gene for G protein-coupled receptor kinase 5
             (GRK5) and a novel gene, complete sequence
          Length = 55700

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 52    ttttctcttccttcccatttattat 76
             |||| ||||||||||||||||||||
Sbjct: 19958 ttttttcttccttcccatttattat 19982
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>emb|AL832835.1|HSM804146 Homo sapiens mRNA; cDNA DKFZp667P1024 (from clone DKFZp667P1024)
          Length = 4054

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 43   tatcaaacattttctcttcct 63
            |||||||||||||||||||||
Sbjct: 3566 tatcaaacattttctcttcct 3546
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>gb|AC122178.2| Homo sapiens chromosome 3 clone RP11-340I14, complete sequence
          Length = 201917

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 43    tatcaaacattttctcttcct 63
             |||||||||||||||||||||
Sbjct: 33617 tatcaaacattttctcttcct 33637
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>emb|BX649332.3| Zebrafish DNA sequence from clone CH211-243P21 in linkage group 4,
              complete sequence
          Length = 122049

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 495    tcaaaacttattttttaatat 515
              |||||||||||||||||||||
Sbjct: 104399 tcaaaacttattttttaatat 104379
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>gb|AC169520.2| Mus musculus BAC clone RP23-35C6 from chromosome 19, complete sequence
          Length = 209374

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 494   ttcaaaacttattttttaat 513
             ||||||||||||||||||||
Sbjct: 32885 ttcaaaacttattttttaat 32904
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>gb|AC158791.4| Mus musculus chromosome 1, clone RP23-247C6, complete sequence
          Length = 218755

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 120    agaaacattcccagtaatta 139
              ||||||||||||||||||||
Sbjct: 218373 agaaacattcccagtaatta 218354
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>gb|AC166063.4| Mus musculus BAC clone RP23-21L22 from chromosome 19, complete sequence
          Length = 232698

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 494    ttcaaaacttattttttaat 513
              ||||||||||||||||||||
Sbjct: 229247 ttcaaaacttattttttaat 229228
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>gb|AE017308.1| Mycoplasma mobile 163K complete genome
          Length = 777079

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 487    taacatgttcaaaacttatttttt 510
              |||||| |||||||||||||||||
Sbjct: 434922 taacattttcaaaacttatttttt 434945
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>ref|XM_866972.1| PREDICTED: Bos taurus similar to translocator of inner
           mitochondrial membrane 44 (LOC615225), mRNA
          Length = 357

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 45  tcaaacattttctcttcctt 64
           ||||||||||||||||||||
Sbjct: 296 tcaaacattttctcttcctt 277
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>gb|AC150412.2| Branchiostoma floridae clone CH302-60C21, complete sequence
          Length = 169780

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 580   taaagttcttcctaaaccct 599
             ||||||||||||||||||||
Sbjct: 30757 taaagttcttcctaaaccct 30776
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>gb|AC162920.2| Mus musculus BAC clone RP23-357C16 from chromosome 9, complete sequence
          Length = 203466

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 478   ctgcctctctaacatgttca 497
             ||||||||||||||||||||
Sbjct: 23100 ctgcctctctaacatgttca 23119
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>emb|BX936415.10| Zebrafish DNA sequence from clone CH211-242N18 in linkage group 6,
             complete sequence
          Length = 176089

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 489   acatgttcaaaacttatttt 508
             ||||||||||||||||||||
Sbjct: 17241 acatgttcaaaacttatttt 17222
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>gb|AC132450.3| Mus musculus BAC clone RP23-187N8 from chromosome 18, complete sequence
          Length = 201282

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 68    atttattataagggcacttt 87
             ||||||||||||||||||||
Sbjct: 77207 atttattataagggcacttt 77188
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>gb|AC133646.4| Mus musculus BAC clone RP23-254F11 from chromosome 18, complete sequence
          Length = 209764

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 131    cagtaattatatgttgtcct 150
              ||||||||||||||||||||
Sbjct: 187891 cagtaattatatgttgtcct 187872
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>gb|AC124506.4| Mus musculus BAC clone RP23-425E23 from chromosome 6, complete sequence
          Length = 198992

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 202   aaagtattcctaggcattaa 221
             ||||||||||||||||||||
Sbjct: 77870 aaagtattcctaggcattaa 77851
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>ref|XM_722210.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY06623)
            partial mRNA
          Length = 3470

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 502  ttattttttaatataagctt 521
            ||||||||||||||||||||
Sbjct: 2320 ttattttttaatataagctt 2301
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>gb|AC105325.11| Mus musculus chromosome 1, clone RP24-455G23, complete sequence
          Length = 139801

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 120   agaaacattcccagtaatta 139
             ||||||||||||||||||||
Sbjct: 56560 agaaacattcccagtaatta 56541
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>emb|AL161740.16| Human DNA sequence from clone RP6-239D12 on chromosome 1p32.1-33
             Contains 3' end of the DAB1 gene for disabled homolog 1
             (Drosophila), a novel gene and the 5' end of a novel gene,
             complete sequence
          Length = 60856

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 398   tttcaggtatcaaattttcc 417
             ||||||||||||||||||||
Sbjct: 57836 tttcaggtatcaaattttcc 57855
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>emb|AL138755.13| Human DNA sequence from clone RP11-48M17 on chromosome 9p24.1-24.3
              Contains the 3' end of the SMARCA2 gene for SWI/SNF related
              matrix associated actin dependent regulator of chromatin
              subfamily a member 2 (SNF2LA), complete sequence
          Length = 160038

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 43     tatcaaacattttctcttcc 62
              ||||||||||||||||||||
Sbjct: 117843 tatcaaacattttctcttcc 117862
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>emb|AL033539.18|HS309H15 Human DNA sequence from clone RP1-309H15 on chromosome 6p22.1-22.3
              Contains a gene similar to hepatoma-derived growth factor
              (high-mobility group protein 1-like)(HDGF), part of a novel
              gene and a CpG Island, complete sequence
          Length = 143429

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 498    aaacttattttttaatataa 517
              ||||||||||||||||||||
Sbjct: 137008 aaacttattttttaatataa 136989
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>emb|AL671005.7| Mouse DNA sequence from clone RP23-76J17 on chromosome 4 Contains the
             Zdhhc21 gene for zinc finger and DHHC domain containing
             protein 21 and a CpG island, complete sequence
          Length = 202374

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 48    aacattttctcttccttcccattt 71
             |||||||||| |||||||||||||
Sbjct: 61514 aacattttcttttccttcccattt 61491
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>gb|AC150418.2| Branchiostoma floridae clone CH302-67G11, complete sequence
          Length = 154273

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 580   taaagttcttcctaaaccct 599
             ||||||||||||||||||||
Sbjct: 22036 taaagttcttcctaaaccct 22055
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>gb|AC069524.18| Homo sapiens 3 BAC RP11-181C6 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 161806

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 514    ataagcttgtttataacttt 533
              ||||||||||||||||||||
Sbjct: 139660 ataagcttgtttataacttt 139641
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>gb|AC079628.20| Homo sapiens 12 BAC RP11-688K16 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 114632

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 360   gtgtaattaaataaagtgag 379
             ||||||||||||||||||||
Sbjct: 63044 gtgtaattaaataaagtgag 63063
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>emb|BX005429.13| Zebrafish DNA sequence from clone DKEY-85K15 in linkage group 16,
              complete sequence
          Length = 173571

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 495    tcaaaacttattttttaatataag 518
              |||||||||| |||||||||||||
Sbjct: 172930 tcaaaacttaatttttaatataag 172907
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>gb|AC010008.5| Drosophila melanogaster 3L BAC RP98-13N15 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 158719

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 352   ctatttaggtgtaattaaat 371
             ||||||||||||||||||||
Sbjct: 49476 ctatttaggtgtaattaaat 49457
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>gb|AC093436.2| Drosophila melanogaster 3L BAC RP98-1O14 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 163711

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 352   ctatttaggtgtaattaaat 371
             ||||||||||||||||||||
Sbjct: 82400 ctatttaggtgtaattaaat 82381
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>tpg|BK002103.1| TPA: TPA_inf: Drosophila melanogaster HDC09865 (HDC09865) gene,
           complete cds
          Length = 1128

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 352 ctatttaggtgtaattaaat 371
           ||||||||||||||||||||
Sbjct: 473 ctatttaggtgtaattaaat 454
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>gb|AC008180.15| Homo sapiens 3 BAC RP11-292L5 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 193035

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 585   ttcttcctaaacccttcatc 604
             ||||||||||||||||||||
Sbjct: 38601 ttcttcctaaacccttcatc 38620
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>gb|AC104656.3| Homo sapiens BAC clone RP11-547J14 from 4, complete sequence
          Length = 175350

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 470    atgtcaggctgcctctctaa 489
              ||||||||||||||||||||
Sbjct: 147429 atgtcaggctgcctctctaa 147410
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>gb|AF269331.1|AF269331 Staphylococcus epidermidis strain SR1 clone step.1002b11 genomic
            sequence
          Length = 3180

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 498  aaacttattttttaatataa 517
            ||||||||||||||||||||
Sbjct: 2121 aaacttattttttaatataa 2102
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>gb|AF185978.1|AF185978 Gerronema chrysophyllum small subunit ribosomal RNA gene, partial
           sequence; mitochondrial gene for mitochondrial product
          Length = 630

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 497 aaaacttattttttaatataagct 520
           |||| |||||||||||||||||||
Sbjct: 232 aaaatttattttttaatataagct 255
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>gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chromosome I, complete
               sequence
          Length = 4332241

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 494     ttcaaaacttattttttaat 513
               ||||||||||||||||||||
Sbjct: 4330999 ttcaaaacttattttttaat 4331018
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>gb|AC010727.6|AC010727 Homo sapiens BAC clone RP11-224E16 from 3, complete sequence
          Length = 148061

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 52    ttttctcttccttcccattt 71
             ||||||||||||||||||||
Sbjct: 93823 ttttctcttccttcccattt 93842
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>gb|AC114804.5| Homo sapiens BAC clone RP11-1181A2 from 2, complete sequence
          Length = 94984

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 571   tttacattttaaagttcttc 590
             ||||||||||||||||||||
Sbjct: 23961 tttacattttaaagttcttc 23942
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>gb|AC068718.6| Homo sapiens BAC clone RP11-123G24 from 2, complete sequence
          Length = 161955

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 52    ttttctcttccttcccattt 71
             ||||||||||||||||||||
Sbjct: 88710 ttttctcttccttcccattt 88729
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>gb|AF269959.1|AF269959 Staphylococcus epidermidis strain SR1 clone step.1035h07 genomic
           sequence
          Length = 3135

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 498 aaacttattttttaatataa 517
           ||||||||||||||||||||
Sbjct: 500 aaacttattttttaatataa 519
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>emb|BX324159.6| Zebrafish DNA sequence from clone CH211-10O1 in linkage group 21,
              complete sequence
          Length = 178610

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 489    acatgttcaaaacttatttt 508
              ||||||||||||||||||||
Sbjct: 137479 acatgttcaaaacttatttt 137460
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>gb|CP000029.1| Staphylococcus epidermidis RP62A, complete genome
          Length = 2616530

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 498    aaacttattttttaatataa 517
              ||||||||||||||||||||
Sbjct: 528965 aaacttattttttaatataa 528946
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>gb|AC149314.2| Phakopsora pachyrhizi clone JGIAFNA-101K12, complete sequence
          Length = 35483

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 497   aaaacttattttttaatata 516
             ||||||||||||||||||||
Sbjct: 23697 aaaacttattttttaatata 23678
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>gb|AC152450.4| Mus musculus BAC clone RP24-342M21 from 18, complete sequence
          Length = 161106

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 131   cagtaattatatgttgtcct 150
             ||||||||||||||||||||
Sbjct: 86789 cagtaattatatgttgtcct 86808
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>emb|CR391915.9| Zebrafish DNA sequence from clone CH211-130O18 in linkage group 19,
             complete sequence
          Length = 77634

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 489   acatgttcaaaacttatttt 508
             ||||||||||||||||||||
Sbjct: 28044 acatgttcaaaacttatttt 28025
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>gb|AE003540.3| Drosophila melanogaster chromosome 3L, section 45 of 83 of the complete
             sequence
          Length = 297381

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 352   ctatttaggtgtaattaaat 371
             ||||||||||||||||||||
Sbjct: 50626 ctatttaggtgtaattaaat 50607
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>gb|AC148372.3| Carollia perspicillata clone 102I5, complete sequence
          Length = 161035

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 497    aaaacttattttttaatata 516
              ||||||||||||||||||||
Sbjct: 148592 aaaacttattttttaatata 148573
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>gb|AE015929.1| Staphylococcus epidermidis ATCC 12228, complete genome
          Length = 2499279

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 498    aaacttattttttaatataa 517
              ||||||||||||||||||||
Sbjct: 636728 aaacttattttttaatataa 636709
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>gb|AE016823.1| Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130, chromosome
               I, complete sequence
          Length = 4277185

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 494     ttcaaaacttattttttaat 513
               ||||||||||||||||||||
Sbjct: 4276001 ttcaaaacttattttttaat 4276020
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>dbj|AK114209.1| Ciona intestinalis cDNA, clone:cicl046b12, full insert sequence
          Length = 2254

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 333  tgtcatttttatccgagaac 352
            ||||||||||||||||||||
Sbjct: 1296 tgtcatttttatccgagaac 1277
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>emb|AL929413.13| Mouse DNA sequence from clone RP24-215D6 on chromosome 4, complete
             sequence
          Length = 117742

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 496   caaaacttattttttaatat 515
             ||||||||||||||||||||
Sbjct: 77198 caaaacttattttttaatat 77179
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>gb|AC149349.2| Phakopsora pachyrhizi clone JGIAFNA-33E17, complete sequence
          Length = 34530

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 497   aaaacttattttttaatata 516
             ||||||||||||||||||||
Sbjct: 25812 aaaacttattttttaatata 25793
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>dbj|AP005203.3| Homo sapiens genomic DNA, chromosome 18 clone:RP11-163J13, complete
             sequence
          Length = 163623

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 39    atactatcaaacattttctc 58
             ||||||||||||||||||||
Sbjct: 71284 atactatcaaacattttctc 71303
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>gb|DP000018.1| Carollia perspicillata target 1 genomic scaffold
          Length = 1501503

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 497     aaaacttattttttaatata 516
               ||||||||||||||||||||
Sbjct: 1489060 aaaacttattttttaatata 1489041
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>gb|AF434658.1| Leptospira interrogans putative protease (ppa), hypothetical protein,
            glucose inhibited division protein A (gidA), putative
            branched-chain amino acid aminotransferase (ilvE), DNA
            polymerase III, gamma subunit (dp3X), chromosomal
            replication initiation protein A (dnaA), DNA polymerase
            III, beta subunit (dnaN), and putative transposase
            protein A,  putative transposase protein B, recombination
            protein RecF (recF), DNA gyrase subunit B (gyrB), DNA
            gyrase subunit A (gyrA), NifR (nifR), NtrC (ntrC) and
            hypothetical protein genes, complete cds
          Length = 29098

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 494  ttcaaaacttattttttaat 513
            ||||||||||||||||||||
Sbjct: 8221 ttcaaaacttattttttaat 8240


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8,173,625
Number of Sequences: 3902068
Number of extensions: 8173625
Number of successful extensions: 179106
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 178743
Number of HSP's gapped (non-prelim): 363
length of query: 613
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 590
effective length of database: 17,143,297,704
effective search space: 10114545645360
effective search space used: 10114545645360
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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