>ATP4_IPOBA (Q40089) ATP synthase delta' chain, mitochondrial precursor (EC|
           3.6.3.14)
          Length = 200

 Score = 64.7 bits (156), Expect = 7e-11
 Identities = 28/36 (77%), Positives = 31/36 (86%)
 Frame = +3

Query: 3   KPGVMXVHEGNDVTKYFVSXGFAFIHANSITDVVXV 110
           KPGVM VHEGNDV+KYFVS GFAFIHANS  D++ V
Sbjct: 113 KPGVMSVHEGNDVSKYFVSGGFAFIHANSFADIIAV 148

>ATP4_ARATH (Q96252) ATP synthase delta' chain, mitochondrial precursor (EC|
           3.6.3.14)
          Length = 203

 Score = 60.8 bits (146), Expect = 1e-09
 Identities = 24/36 (66%), Positives = 30/36 (83%)
 Frame = +3

Query: 3   KPGVMXVHEGNDVTKYFVSXGFAFIHANSITDVVXV 110
           KPG+M VHEG DV KYF+S GFAF+HANS+ D++ V
Sbjct: 116 KPGIMSVHEGTDVKKYFLSSGFAFLHANSVADIIAV 151

>ATP4_PEA (Q41000) ATP synthase delta' chain, mitochondrial precursor (EC|
           3.6.3.14)
          Length = 197

 Score = 57.8 bits (138), Expect = 8e-09
 Identities = 24/36 (66%), Positives = 28/36 (77%)
 Frame = +3

Query: 3   KPGVMXVHEGNDVTKYFVSXGFAFIHANSITDVVXV 110
           KPGV+ V EG D TKYFVS GF FIHANS+ D++ V
Sbjct: 110 KPGVLTVQEGTDTTKYFVSSGFRFIHANSVADIIAV 145

>ATPD_ASHGO (Q757N0) ATP synthase delta chain, mitochondrial precursor (EC|
           3.6.3.14)
          Length = 158

 Score = 33.9 bits (76), Expect = 0.13
 Identities = 15/35 (42%), Positives = 22/35 (62%)
 Frame = +3

Query: 6   PGVMXVHEGNDVTKYFVSXGFAFIHANSITDVVXV 110
           PGV+ V EG++  K+FVS GFA +  +S   +  V
Sbjct: 74  PGVVEVLEGSESKKFFVSGGFATVQPDSTLSITSV 108

>ATPD_AGABI (Q92196) ATP synthase delta chain, mitochondrial precursor (EC|
           3.6.3.14)
          Length = 162

 Score = 32.3 bits (72), Expect = 0.38
 Identities = 14/29 (48%), Positives = 20/29 (68%)
 Frame = +3

Query: 3   KPGVMXVHEGNDVTKYFVSXGFAFIHANS 89
           +PGV+ V E +   K+FVS GFA +H N+
Sbjct: 75  RPGVVEVVEDSGSQKWFVSGGFATVHPNN 103

>ATPD_KLULA (P78700) ATP synthase delta chain, mitochondrial precursor (EC|
           3.6.3.14)
          Length = 159

 Score = 32.3 bits (72), Expect = 0.38
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = +3

Query: 6   PGVMXVHEGNDVTKYFVSXGFAFIHANSITDVVXV 110
           PGV+ V EG+   K+FVS GFA +  +S   +  V
Sbjct: 75  PGVVEVLEGSSSKKFFVSGGFATVQPDSTLAITSV 109

>ATPD_YEAST (Q12165) ATP synthase delta chain, mitochondrial precursor (EC|
           3.6.3.14)
          Length = 160

 Score = 31.6 bits (70), Expect = 0.65
 Identities = 13/28 (46%), Positives = 20/28 (71%)
 Frame = +3

Query: 6   PGVMXVHEGNDVTKYFVSXGFAFIHANS 89
           PGV+ V EG++  K+F+S GFA +  +S
Sbjct: 76  PGVVEVMEGSNSKKFFISGGFATVQPDS 103

>ATPD_RAT (P35434) ATP synthase delta chain, mitochondrial precursor (EC|
           3.6.3.14)
          Length = 168

 Score = 29.6 bits (65), Expect = 2.5
 Identities = 14/30 (46%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
 Frame = +3

Query: 3   KPGVMXVH-EGNDVTKYFVSXGFAFIHANS 89
           +PG++ VH E    TKYFVS G   ++A+S
Sbjct: 81  RPGLVMVHAEDGTTTKYFVSSGSVTVNADS 110

>ATPD_MOUSE (Q9D3D9) ATP synthase delta chain, mitochondrial precursor (EC|
           3.6.3.14)
          Length = 168

 Score = 29.6 bits (65), Expect = 2.5
 Identities = 14/30 (46%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
 Frame = +3

Query: 3   KPGVMXVH-EGNDVTKYFVSXGFAFIHANS 89
           +PG++ VH E    TKYFVS G   ++A+S
Sbjct: 81  RPGLVVVHTEDGTTTKYFVSSGSVTVNADS 110

>ATPD_BOVIN (P05630) ATP synthase delta chain, mitochondrial precursor (EC|
           3.6.3.14)
          Length = 168

 Score = 28.1 bits (61), Expect = 7.2
 Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
 Frame = +3

Query: 3   KPGVMXVH-EGNDVTKYFVSXGFAFIHANS 89
           +PG++ VH E    +KYFVS G   ++A+S
Sbjct: 81  RPGLVVVHAEDGTTSKYFVSSGSVTVNADS 110

>ATPD_SCHPO (Q9P6R6) ATP synthase delta chain, mitochondrial precursor (EC|
           3.6.3.14)
          Length = 160

 Score = 27.7 bits (60), Expect = 9.4
 Identities = 13/24 (54%), Positives = 18/24 (75%), Gaps = 1/24 (4%)
 Frame = +3

Query: 3   KPGVMXV-HEGNDVTKYFVSXGFA 71
           KPGV+ V  E ++ +KYF+S GFA
Sbjct: 74  KPGVISVTDESSNKSKYFISGGFA 97

>ATPD_HUMAN (P30049) ATP synthase delta chain, mitochondrial precursor (EC|
           3.6.3.14)
          Length = 168

 Score = 27.7 bits (60), Expect = 9.4
 Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
 Frame = +3

Query: 3   KPGVMXVH-EGNDVTKYFVSXGFAFIHANS 89
           +PG++ VH E    +KYFVS G   ++A+S
Sbjct: 81  RPGLVVVHAEDGTTSKYFVSSGSIAVNADS 110


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,535,713
Number of Sequences: 219361
Number of extensions: 119512
Number of successful extensions: 377
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 362
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 377
length of database: 80,573,946
effective HSP length: 12
effective length of database: 77,941,614
effective search space used: 1870598736
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)