ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal9g18
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1P3C2G_RAT (O70173) Phosphatidylinositol-4-phosphate 3-kinase C2 ... 32 0.67
2AMPA_HELPJ (Q9ZLR1) Cytosol aminopeptidase (EC 3.4.11.1) (Leucin... 32 1.2
3AMPA_HELPY (O25294) Cytosol aminopeptidase (EC 3.4.11.1) (Leucin... 31 1.5
4AMPA_HELHP (Q7VGF0) Probable cytosol aminopeptidase (EC 3.4.11.1... 31 1.5
5FZD4_XENLA (Q9PT62) Frizzled 4 precursor (Frizzled-4) (Fz-4) (Xfz4) 31 2.0
6FZD4_MOUSE (Q61088) Frizzled 4 precursor (Frizzled-4) (Fz-4) (mFz4) 31 2.0
7FZ10A_XENLA (Q9DEB5) Frizzled 10-A precursor (Frizzled-10A) (Fz-... 31 2.0
8MET_RAT (P97523) Hepatocyte growth factor receptor precursor (EC... 30 2.6
9MET_PONPY (Q2IBD8) Hepatocyte growth factor receptor precursor (... 30 2.6
10MET_PANTR (Q2QLF1) Hepatocyte growth factor receptor precursor (... 30 2.6
11MET_OTOGA (Q2QLH6) Hepatocyte growth factor receptor precursor (... 30 2.6
12MET_MICMU (Q2QL89) Hepatocyte growth factor receptor precursor (... 30 2.6
13MET_HUMAN (P08581) Hepatocyte growth factor receptor precursor (... 30 2.6
14MET_CALMO (Q2QLC0) Hepatocyte growth factor receptor precursor (... 30 2.6
15MET_CALJA (Q2QLG5) Hepatocyte growth factor receptor precursor (... 30 2.6
16MET_CANFA (Q75ZY9) Hepatocyte growth factor receptor precursor (... 30 3.3
17MET_MOUSE (P16056) Hepatocyte growth factor receptor precursor (... 30 3.3
18FZD4_CHICK (Q9IA05) Frizzled 4 precursor (Frizzled-4) (Fz-4) (cF... 30 3.3
19FZ10B_XENLA (Q9W742) Frizzled 10-B precursor (Frizzled-10B) (Fz-... 30 3.3
20R1AB_CVH22 (Q05002) Replicase polyprotein 1ab (pp1ab) (ORF1ab po... 30 3.3
21MET_PIG (Q2QLE0) Hepatocyte growth factor receptor precursor (EC... 30 3.3
22MET_HORSE (Q2QLA9) Hepatocyte growth factor receptor precursor (... 30 3.3
23RRPL_BUNYW (P20470) RNA-directed RNA polymerase (EC 2.7.7.48) (L... 30 4.4
24FZD4_RAT (Q9QZH0) Frizzled 4 precursor (Frizzled-4) (Fz-4) (rFz4) 30 4.4
25P3C2G_MOUSE (O70167) Phosphatidylinositol-4-phosphate 3-kinase C... 30 4.4
26FZD4_HUMAN (Q9ULV1) Frizzled 4 precursor (Frizzled-4) (Fz-4) (hF... 30 4.4 
>P3C2G_RAT (O70173) Phosphatidylinositol-4-phosphate 3-kinase C2|
           domain-containing gamma polypeptide (EC 2.7.1.154)
           (Phosphoinositide 3-Kinase-C2-gamma) (PtdIns-3-kinase C2
           gamma) (PI3K-C2gamma)
          Length = 1505

 Score = 32.3 bits (72), Expect = 0.67
 Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
 Frame = -1

Query: 471 VGSEFPHQIHEVIDIYLKGECEDSAEARSVSEGS-VHQCLVSLLQVAVSCTHSIPSERAN 295
           V SE    +H+++D+Y    C D   AR+    S  H  L S L   V   H++P   A+
Sbjct: 501 VTSELSRSLHQLVDVYCSSFCTDFRPARAPGGVSRDHAGLHSHLSFTVCSLHNVPETWAH 560

Query: 294 MRDAAS 277
              A S
Sbjct: 561 SYKAFS 566
to top
>AMPA_HELPJ (Q9ZLR1) Cytosol aminopeptidase (EC 3.4.11.1) (Leucine|
           aminopeptidase) (LAP) (Leucyl aminopeptidase)
          Length = 496

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 18/53 (33%), Positives = 24/53 (45%)
 Frame = -3

Query: 172 KNTDIHVAIYLMVCFLATRSMLPSIIVDFLTGNKLYSVCCNILGNCLCAVTGH 14
           +NTD    + L  C    + + P +IVDF T   L   C   LG    A+ GH
Sbjct: 337 RNTDAEGRLVLADCLSYAQDLSPDVIVDFAT---LTGACVVGLGEFTSAIMGH 386
to top
>AMPA_HELPY (O25294) Cytosol aminopeptidase (EC 3.4.11.1) (Leucine|
           aminopeptidase) (LAP) (Leucyl aminopeptidase)
          Length = 496

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 18/53 (33%), Positives = 24/53 (45%)
 Frame = -3

Query: 172 KNTDIHVAIYLMVCFLATRSMLPSIIVDFLTGNKLYSVCCNILGNCLCAVTGH 14
           +NTD    + L  C    + + P +IVDF T   L   C   LG    A+ GH
Sbjct: 337 RNTDAEGRLVLADCLSYAQDLNPDVIVDFAT---LTGACVVGLGEFTSAIMGH 386
to top
>AMPA_HELHP (Q7VGF0) Probable cytosol aminopeptidase (EC 3.4.11.1) (Leucine|
           aminopeptidase) (LAP) (Leucyl aminopeptidase)
          Length = 474

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 16/53 (30%), Positives = 24/53 (45%)
 Frame = -3

Query: 172 KNTDIHVAIYLMVCFLATRSMLPSIIVDFLTGNKLYSVCCNILGNCLCAVTGH 14
           +NTD    + L+ C    + + P I++DF T   L   C   LG     + GH
Sbjct: 316 RNTDAEGRLVLVDCLSYAQDLKPDILIDFAT---LTGACVVALGEFTSGIMGH 365
to top
>FZD4_XENLA (Q9PT62) Frizzled 4 precursor (Frizzled-4) (Fz-4) (Xfz4)|
          Length = 523

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 16/59 (27%), Positives = 32/59 (54%)
 Frame = -3

Query: 265 NSGVISWKANMNSSV*LCTYNNYIYFPAERKKNTDIHVAIYLMVCFLATRSMLPSIIVD 89
           NS   +W     + V  C Y++ +Y     K+ TDI +A++  +CF++T   + + ++D
Sbjct: 173 NSDQYTWVKRSMNCVLKCGYDSGLYNRLS-KEFTDIWMAVWASLCFISTAFTVLTFLID 230
to top
>FZD4_MOUSE (Q61088) Frizzled 4 precursor (Frizzled-4) (Fz-4) (mFz4)|
          Length = 537

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 17/60 (28%), Positives = 31/60 (51%)
 Frame = -3

Query: 268 SNSGVISWKANMNSSV*LCTYNNYIYFPAERKKNTDIHVAIYLMVCFLATRSMLPSIIVD 89
           SNS    W     + V  C Y+  +Y     K+ TDI +A++  +CF++T   + + ++D
Sbjct: 186 SNSDQYIWVKRSLNCVLKCGYDAGLY-SRSAKEFTDIWMAVWASLCFISTTFTVLTFLID 244
to top
>FZ10A_XENLA (Q9DEB5) Frizzled 10-A precursor (Frizzled-10A) (Fz-10A) (Xfz10A)|
          Length = 586

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 6/81 (7%)
 Frame = -3

Query: 313 PQRKS*HERCS*QDPS------NSGVISWKANMNSSV*LCTYNNYIYFPAERKKNTDIHV 152
           PQR S       +DP+      NSG         S   LC+ +  +Y+  + KK   I +
Sbjct: 177 PQRPSSGHEIYPKDPTSRSSCENSGKFHHVEKSASCAPLCSSSVDVYWSKDDKKFAFIWI 236

Query: 151 AIYLMVCFLATRSMLPSIIVD 89
           AI+ ++CF ++   + + +VD
Sbjct: 237 AIWSILCFFSSAFTVLTFLVD 257
to top
>MET_RAT (P97523) Hepatocyte growth factor receptor precursor (EC 2.7.10.1)|
            (HGF receptor) (Scatter factor receptor) (SF receptor)
            (HGF/SF receptor) (Met proto-oncogene tyrosine kinase)
            (c-Met)
          Length = 1382

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 15/58 (25%), Positives = 29/58 (50%)
 Frame = -1

Query: 360  CLVSLLQVAVSCTHSIPSERANMRDAASKIQAIQASYLGRQT*ILQFNYVHTTTTYTS 187
            C  +L +V + C H     R ++ +  S+I +I ++++G        +YVH   TY +
Sbjct: 1309 CPDALYEVMLKCWHPKAEMRPSVSELVSRISSIFSTFIGE-------HYVHVNATYVN 1359
to top
>MET_PONPY (Q2IBD8) Hepatocyte growth factor receptor precursor (EC 2.7.10.1)|
            (HGF receptor) (Scatter factor receptor) (SF receptor)
            (HGF/SF receptor) (Met proto-oncogene tyrosine kinase)
            (c-Met)
          Length = 1390

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 16/58 (27%), Positives = 27/58 (46%)
 Frame = -1

Query: 360  CLVSLLQVAVSCTHSIPSERANMRDAASKIQAIQASYLGRQT*ILQFNYVHTTTTYTS 187
            C   L +V + C H     R +  +  S+I AI ++++G        +YVH   TY +
Sbjct: 1308 CPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE-------HYVHVNATYVN 1358
to top
>MET_PANTR (Q2QLF1) Hepatocyte growth factor receptor precursor (EC 2.7.10.1)|
            (HGF receptor) (Scatter factor receptor) (SF receptor)
            (HGF/SF receptor) (Met proto-oncogene tyrosine kinase)
            (c-Met)
          Length = 1390

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 16/58 (27%), Positives = 27/58 (46%)
 Frame = -1

Query: 360  CLVSLLQVAVSCTHSIPSERANMRDAASKIQAIQASYLGRQT*ILQFNYVHTTTTYTS 187
            C   L +V + C H     R +  +  S+I AI ++++G        +YVH   TY +
Sbjct: 1308 CPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE-------HYVHVNATYVN 1358
to top
>MET_OTOGA (Q2QLH6) Hepatocyte growth factor receptor precursor (EC 2.7.10.1)|
            (HGF receptor) (Scatter factor receptor) (SF receptor)
            (HGF/SF receptor) (Met proto-oncogene tyrosine kinase)
            (c-Met)
          Length = 1382

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 16/58 (27%), Positives = 27/58 (46%)
 Frame = -1

Query: 360  CLVSLLQVAVSCTHSIPSERANMRDAASKIQAIQASYLGRQT*ILQFNYVHTTTTYTS 187
            C   L +V + C H     R +  +  S+I AI ++++G        +YVH   TY +
Sbjct: 1309 CPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE-------HYVHVNATYVN 1359
to top
>MET_MICMU (Q2QL89) Hepatocyte growth factor receptor precursor (EC 2.7.10.1)|
            (HGF receptor) (Scatter factor receptor) (SF receptor)
            (HGF/SF receptor) (Met proto-oncogene tyrosine kinase)
            (c-Met)
          Length = 1382

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 16/58 (27%), Positives = 27/58 (46%)
 Frame = -1

Query: 360  CLVSLLQVAVSCTHSIPSERANMRDAASKIQAIQASYLGRQT*ILQFNYVHTTTTYTS 187
            C   L +V + C H     R +  +  S+I AI ++++G        +YVH   TY +
Sbjct: 1309 CPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE-------HYVHVNATYVN 1359
to top
>MET_HUMAN (P08581) Hepatocyte growth factor receptor precursor (EC 2.7.10.1)|
            (HGF receptor) (Scatter factor receptor) (SF receptor)
            (HGF/SF receptor) (Met proto-oncogene tyrosine kinase)
            (c-Met)
          Length = 1390

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 16/58 (27%), Positives = 27/58 (46%)
 Frame = -1

Query: 360  CLVSLLQVAVSCTHSIPSERANMRDAASKIQAIQASYLGRQT*ILQFNYVHTTTTYTS 187
            C   L +V + C H     R +  +  S+I AI ++++G        +YVH   TY +
Sbjct: 1308 CPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE-------HYVHVNATYVN 1358
to top
>MET_CALMO (Q2QLC0) Hepatocyte growth factor receptor precursor (EC 2.7.10.1)|
            (HGF receptor) (Scatter factor receptor) (SF receptor)
            (HGF/SF receptor) (Met proto-oncogene tyrosine kinase)
            (c-Met)
          Length = 1381

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 16/58 (27%), Positives = 27/58 (46%)
 Frame = -1

Query: 360  CLVSLLQVAVSCTHSIPSERANMRDAASKIQAIQASYLGRQT*ILQFNYVHTTTTYTS 187
            C   L +V + C H     R +  +  S+I AI ++++G        +YVH   TY +
Sbjct: 1308 CPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE-------HYVHVNATYVN 1358
to top
>MET_CALJA (Q2QLG5) Hepatocyte growth factor receptor precursor (EC 2.7.10.1)|
            (HGF receptor) (Scatter factor receptor) (SF receptor)
            (HGF/SF receptor) (Met proto-oncogene tyrosine kinase)
            (c-Met)
          Length = 1381

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 16/58 (27%), Positives = 27/58 (46%)
 Frame = -1

Query: 360  CLVSLLQVAVSCTHSIPSERANMRDAASKIQAIQASYLGRQT*ILQFNYVHTTTTYTS 187
            C   L +V + C H     R +  +  S+I AI ++++G        +YVH   TY +
Sbjct: 1308 CPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE-------HYVHVNATYVN 1358
to top
>MET_CANFA (Q75ZY9) Hepatocyte growth factor receptor precursor (EC 2.7.10.1)|
            (HGF receptor) (Scatter factor receptor) (SF receptor)
            (HGF/SF receptor) (Met proto-oncogene tyrosine kinase)
            (c-Met)
          Length = 1382

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 16/58 (27%), Positives = 27/58 (46%)
 Frame = -1

Query: 360  CLVSLLQVAVSCTHSIPSERANMRDAASKIQAIQASYLGRQT*ILQFNYVHTTTTYTS 187
            C   L +V + C H     R +  +  S+I AI ++++G        +YVH   TY +
Sbjct: 1309 CPDPLYEVMLKCWHPRAELRPSFSELVSRISAIFSTFIGE-------HYVHVNATYVN 1359
to top
>MET_MOUSE (P16056) Hepatocyte growth factor receptor precursor (EC 2.7.10.1)|
            (HGF receptor) (Scatter factor receptor) (SF receptor)
            (HGF/SF receptor) (Met proto-oncogene tyrosine kinase)
            (c-Met)
          Length = 1379

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 15/58 (25%), Positives = 28/58 (48%)
 Frame = -1

Query: 360  CLVSLLQVAVSCTHSIPSERANMRDAASKIQAIQASYLGRQT*ILQFNYVHTTTTYTS 187
            C  +L +V + C H     R +  +  S+I +I ++++G        +YVH   TY +
Sbjct: 1306 CPDALYEVMLKCWHPKAEMRPSFSELVSRISSIFSTFIGE-------HYVHVNATYVN 1356
to top
>FZD4_CHICK (Q9IA05) Frizzled 4 precursor (Frizzled-4) (Fz-4) (cFz-4)|
          Length = 525

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 17/60 (28%), Positives = 30/60 (50%)
 Frame = -3

Query: 268 SNSGVISWKANMNSSV*LCTYNNYIYFPAERKKNTDIHVAIYLMVCFLATRSMLPSIIVD 89
           SNS    W       V  C Y+  +Y     K+ TDI +A++  +CF++T   + + ++D
Sbjct: 174 SNSDQYIWVKRNLDCVLKCGYDAGLY-SRSAKEFTDIWMAVWASLCFISTAFTVLTFLID 232
to top
>FZ10B_XENLA (Q9W742) Frizzled 10-B precursor (Frizzled-10B) (Fz-10B) (Xfz10B)|
           (Frizzled 9) (Xfz9)
          Length = 580

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 19/79 (24%), Positives = 35/79 (44%)
 Frame = -3

Query: 325 HTLHPQRKS*HERCS*QDPSNSGVISWKANMNSSV*LCTYNNYIYFPAERKKNTDIHVAI 146
           H ++P+       C      NSG         S   LC+ +  +Y+    KK   I +AI
Sbjct: 178 HEMYPKDPKGRSSCE-----NSGKFHHVEKSASCAPLCSSSVDVYWSKNDKKFAFIWIAI 232

Query: 145 YLMVCFLATRSMLPSIIVD 89
           + ++CF ++   + + +VD
Sbjct: 233 WSLLCFFSSAFTVLTFLVD 251
to top
>R1AB_CVH22 (Q05002) Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein)|
           [Includes: Replicase polyprotein 1a (pp1a) (ORF1a)]
           [Contains: p9; p87; p195 (EC 3.4.22.-) (Papain-like
           proteinases 1/2) (PL1-PRO/PL2-PRO); Peptide HD2; 3C-like
           proteinase (EC 3.4
          Length = 6758

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 9/46 (19%)
 Frame = -3

Query: 121 TRSMLPSIIVDFLTGNKLYSV---------CCNILGNCLCAVTGHI 11
           T+ +  S +V    G K +SV         CCN++ N LC V G++
Sbjct: 235 TKPVFISALVQCTCGTKSWSVGDWTGFKSSCCNVISNKLCVVPGNV 280
to top
>MET_PIG (Q2QLE0) Hepatocyte growth factor receptor precursor (EC 2.7.10.1)|
            (HGF receptor) (Scatter factor receptor) (SF receptor)
            (HGF/SF receptor) (Met proto-oncogene tyrosine kinase)
            (c-Met)
          Length = 1381

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 16/58 (27%), Positives = 27/58 (46%)
 Frame = -1

Query: 360  CLVSLLQVAVSCTHSIPSERANMRDAASKIQAIQASYLGRQT*ILQFNYVHTTTTYTS 187
            C   L +V + C H     R +  +  S+I AI ++++G        +YVH   TY +
Sbjct: 1308 CPDPLYEVMLKCWHPRAELRPSFSELVSRISAIFSTFIGE-------HYVHVNATYVN 1358
to top
>MET_HORSE (Q2QLA9) Hepatocyte growth factor receptor precursor (EC 2.7.10.1)|
            (HGF receptor) (Scatter factor receptor) (SF receptor)
            (HGF/SF receptor) (Met proto-oncogene tyrosine kinase)
            (c-Met)
          Length = 1381

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 16/58 (27%), Positives = 27/58 (46%)
 Frame = -1

Query: 360  CLVSLLQVAVSCTHSIPSERANMRDAASKIQAIQASYLGRQT*ILQFNYVHTTTTYTS 187
            C   L +V + C H     R +  +  S+I AI ++++G        +YVH   TY +
Sbjct: 1308 CPDPLYEVMLKCWHPKAELRPSFSELVSRISAIFSTFIGE-------HYVHVNATYVN 1358
to top
>RRPL_BUNYW (P20470) RNA-directed RNA polymerase (EC 2.7.7.48) (L protein)|
          Length = 2238

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = -1

Query: 417  GECEDSAEARSVSEGSV-HQCLVSLLQVAVSCTHSIPSERANMRD 286
            G  ED A   S ++ S+ H C  SL+ +A+SC+H I     NM D
Sbjct: 1244 GPYEDLASRLSAAQQSLKHGCPPSLVWLAISCSHWITFFTYNMLD 1288
to top
>FZD4_RAT (Q9QZH0) Frizzled 4 precursor (Frizzled-4) (Fz-4) (rFz4)|
          Length = 538

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 16/60 (26%), Positives = 31/60 (51%)
 Frame = -3

Query: 268 SNSGVISWKANMNSSV*LCTYNNYIYFPAERKKNTDIHVAIYLMVCFLATRSMLPSIIVD 89
           +NS    W     + V  C Y+  +Y     K+ TDI +A++  +CF++T   + + ++D
Sbjct: 187 TNSDQYIWVKRSLNCVLKCGYDAGLY-SRSAKEFTDIWMAVWASLCFISTTFTVLTFLID 245
to top
>P3C2G_MOUSE (O70167) Phosphatidylinositol-4-phosphate 3-kinase C2|
           domain-containing gamma polypeptide (EC 2.7.1.154)
           (Phosphoinositide 3-Kinase-C2-gamma) (PtdIns-3-kinase C2
           gamma) (PI3K-C2gamma)
          Length = 1506

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
 Frame = -1

Query: 471 VGSEFPHQIHEVIDIYLKGECEDSAEARSVSEGS-VHQCLVSLLQVAVSCTHSIPSERAN 295
           V +E    I+++ID+Y    C D     +    S VH  L S L   V   H++P   A+
Sbjct: 502 VTAELSRSIYQLIDVYCSSFCTDFQPVHTPGGVSHVHAGLQSHLSFTVCSLHNVPETWAH 561

Query: 294 MRDAAS 277
              A S
Sbjct: 562 SYKAFS 567
to top
>FZD4_HUMAN (Q9ULV1) Frizzled 4 precursor (Frizzled-4) (Fz-4) (hFz4) (FzE4)|
          Length = 537

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 16/60 (26%), Positives = 31/60 (51%)
 Frame = -3

Query: 268 SNSGVISWKANMNSSV*LCTYNNYIYFPAERKKNTDIHVAIYLMVCFLATRSMLPSIIVD 89
           +NS    W     + V  C Y+  +Y     K+ TDI +A++  +CF++T   + + ++D
Sbjct: 186 TNSDQYIWVKRSLNCVLKCGYDAGLY-SRSAKEFTDIWMAVWASLCFISTAFTVLTFLID 244


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,779,108
Number of Sequences: 219361
Number of extensions: 1385812
Number of successful extensions: 2933
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 2863
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2933
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3304846491
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top