ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags11l14
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|AY108482.1| Zea mays PCO148683 mRNA sequence 452 e-124
2gb|BT017691.1| Zea mays clone EL01N0444C11.c mRNA sequence 422 e-115
3dbj|AK069751.1| Oryza sativa (japonica cultivar-group) cDNA clon... 383 e-103
4gb|AC104847.2| Oryza sativa (japonica cultivar-group) chromosome... 147 5e-32
5dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 147 5e-32
6gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 147 5e-32
7dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 127 5e-26
8gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 127 5e-26
9emb|AL831799.3|CNS08CAC Oryza sativa chromosome 12, . BAC OSJNBa... 127 5e-26
10emb|AJ293490.1|SHY293490 Saccharum hybrid cultivar R570 microsat... 115 2e-22
11gb|BT012933.1| Lycopersicon esculentum clone 114096R, mRNA sequence 74 6e-10
12gb|AC080068.6| Homo sapiens BAC clone RP11-97L4 from 7, complete... 48 0.034
13gb|CP000316.1| Polaromonas sp. JS666, complete genome 44 0.54
14gb|AC068950.11| Oryza sativa chromosome 10 BAC OSJNBa0041P03 gen... 44 0.54
15dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.54
16gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 44 0.54
17gb|AC120856.6| Mus musculus chromosome 1, clone RP23-284B21, com... 42 2.1
18gb|AC154121.6| Mus musculus chromosome 1, clone RP24-93A17, comp... 42 2.1
19gb|CP000148.1| Geobacter metallireducens GS-15, complete genome 40 8.4
20gb|AC160992.2| Mus musculus BAC clone RP23-147I23 from chromosom... 40 8.4
21gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-... 40 8.4
22ref|XM_744313.1| Aspergillus fumigatus Af293 60S ribosomal prote... 40 8.4
23gb|AY208121.1| Sus scrofa myostatin gene, complete cds 40 8.4
24emb|BX511184.11| Zebrafish DNA sequence from clone DKEY-103A3 in... 40 8.4
25gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete g... 40 8.4
26dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.4
27gb|AC023399.4|AC023399 Homo sapiens chromosome 17, clone RP11-78... 40 8.4
28gb|AC124283.11| Homo sapiens chromosome 17, clone RP13-638C3, co... 40 8.4
29gb|AC005177.1|AC005177 Homo sapiens chromosome 17, clone HCIT462... 40 8.4
30dbj|AP006441.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.4
31emb|CT025751.20| Mouse DNA sequence from clone RP24-365A12 on ch... 40 8.4
32gb|AF091008.1|AF091008 Tick-borne encephalitis virus strain Crim... 40 8.4
33emb|CT030635.8| Mouse DNA sequence from clone RP23-94N7 on chrom... 40 8.4

>gb|AY108482.1| Zea mays PCO148683 mRNA sequence
          Length = 1298

 Score =  452 bits (228), Expect = e-124
 Identities = 393/448 (87%)
 Strand = Plus / Plus

                                                                       
Query: 42  caaaagggaactggaagagcacgtcatggaacattgcgtggttgtcagtttcgaggaggt 101
           ||||| ||||| |||| |||||| ||||||||| |||| |||   |||||||| || |||
Sbjct: 512 caaaaaggaaccggaaaagcacgacatggaacactgcgcggtgcccagtttcgtggtggt 571

                                                                       
Query: 102 gcaactatgcatggcccgaaaccacgaagccatgcattcaagttgcagaagaaagtacga 161
           ||||| |||||||| || ||||| |||||||||||| ||||| |||||||||||||||| 
Sbjct: 572 gcaaccatgcatgggcctaaacctcgaagccatgcaatcaagctgcagaagaaagtacgg 631

                                                                       
Query: 162 cgtctgggacttaagatagccttgtctgctagaacagctgaggggaagctctgcatcttt 221
           || ||||| |||||||| |||||||||||| |||| ||||||||||||||||  ||||||
Sbjct: 632 cggctggggcttaagattgccttgtctgctcgaactgctgaggggaagctcttgatcttt 691

                                                                       
Query: 222 gaggacttagaagtccctagccacaagacgaaaaacatcgtgcagtacataaagcagatg 281
           |||||||| ||||| ||||||||||||||||||||||| ||||| ||||| |  ||||||
Sbjct: 692 gaggacttggaagttcctagccacaagacgaaaaacattgtgcaatacattagacagatg 751

                                                                       
Query: 282 gatgatacgaagaagatattgttggtggatggaggtgacattgataagaagttaaagctg 341
           |||||  | |||||| |  |||||||||||||||| ||||||||||||||| ||||||||
Sbjct: 752 gatgactcaaagaaggttctgttggtggatggaggcgacattgataagaagctaaagctg 811

                                                                       
Query: 342 gctactcaaaatcttcactacgtgaatgtcattccttcgattggcctcaatgtctacagc 401
           || |||||||| ||||||||||| || ||  ||||||| ||||||||||| |||||||| 
Sbjct: 812 gccactcaaaaccttcactacgttaacgtacttccttccattggcctcaacgtctacagt 871

                                                                       
Query: 402 atcctgcagcatgacacccttgtaatgactcgggacgccatcaacagaatcgttgagcgg 461
           ||||| |||||||||||||||||||||||||||| ||| |||||||||||||| ||||||
Sbjct: 872 atcctccagcatgacacccttgtaatgactcgggccgctatcaacagaatcgtcgagcgg 931

                                       
Query: 462 atgcacacccccatcagccgctagcaag 489
           ||||| |||||||||| |||||||||||
Sbjct: 932 atgcatacccccatcaaccgctagcaag 959



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>gb|BT017691.1| Zea mays clone EL01N0444C11.c mRNA sequence
          Length = 1227

 Score =  422 bits (213), Expect = e-115
 Identities = 387/445 (86%)
 Strand = Plus / Plus

                                                                       
Query: 42  caaaagggaactggaagagcacgtcatggaacattgcgtggttgtcagtttcgaggaggt 101
           ||||| ||||| |||| |||||| ||||||||| |||| |||   |||||||| || |||
Sbjct: 456 caaaaaggaaccggaaaagcacgacatggaacactgcgcggtgcccagtttcgtggtggt 515

                                                                       
Query: 102 gcaactatgcatggcccgaaaccacgaagccatgcattcaagttgcagaagaaagtacga 161
           ||||| |||||||| || ||||| ||||| |||| | ||||| |||||||||||||||| 
Sbjct: 516 gcaaccatgcatgggcctaaacctcgaagtcatgaaatcaagctgcagaagaaagtacgg 575

                                                                       
Query: 162 cgtctgggacttaagatagccttgtctgctagaacagctgaggggaagctctgcatcttt 221
           || ||||| |||||||| |||||||||||| |||| ||||||||||||||||  ||||||
Sbjct: 576 cggctggggcttaagattgccttgtctgctcgaactgctgaggggaagctcttgatcttt 635

                                                                       
Query: 222 gaggacttagaagtccctagccacaagacgaaaaacatcgtgcagtacataaagcagatg 281
           |||||||| ||||| ||||||||||||||||||||||| ||||| ||||| |  ||||||
Sbjct: 636 gaggacttggaagttcctagccacaagacgaaaaacattgtgcaatacattagacagatg 695

                                                                       
Query: 282 gatgatacgaagaagatattgttggtggatggaggtgacattgataagaagttaaagctg 341
           |||||  | |||||| |  |||||||||||||||| ||||||||||||||| ||||| ||
Sbjct: 696 gatgactcaaagaaggttctgttggtggatggaggcgacattgataagaagctaaagttg 755

                                                                       
Query: 342 gctactcaaaatcttcactacgtgaatgtcattccttcgattggcctcaatgtctacagc 401
           || |||||||| ||||||||||| || ||  ||||||| ||||||||||| |||||||| 
Sbjct: 756 gccactcaaaaccttcactacgttaacgtacttccttccattggcctcaacgtctacagt 815

                                                                       
Query: 402 atcctgcagcatgacacccttgtaatgactcgggacgccatcaacagaatcgttgagcgg 461
           ||||| |||||||||||||||||||||||||||| ||| |||||||||||||| ||||||
Sbjct: 816 atcctccagcatgacacccttgtaatgactcgggccgctatcaacagaatcgtcgagcgg 875

                                    
Query: 462 atgcacacccccatcagccgctagc 486
           ||||| |||||||||| ||||||||
Sbjct: 876 atgcatacccccatcaaccgctagc 900



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>dbj|AK069751.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023030I10, full
           insert sequence
          Length = 1218

 Score =  383 bits (193), Expect = e-103
 Identities = 407/476 (85%), Gaps = 2/476 (0%)
 Strand = Plus / Plus

                                                                       
Query: 12  gagcggcacaggnaagnaaagccttataaacaaaagggaactggaagagcacgtcatgga 71
           |||||||||||| ||| ||| ||||| || ||||| |||||||| |||||||| ||||| 
Sbjct: 481 gagcggcacagg-aagaaaa-ccttacaatcaaaaaggaactggcagagcacgacatggt 538

                                                                       
Query: 72  acattgcgtggttgtcagtttcgaggaggtgcaactatgcatggcccgaaaccacgaagc 131
           ||| |||| ||   ||||||||| || |||||||| |||||||| || ||||||||||| 
Sbjct: 539 acactgcgcggccctcagtttcgcggtggtgcaaccatgcatgggcctaaaccacgaagt 598

                                                                       
Query: 132 catgcattcaagttgcagaagaaagtacgacgtctgggacttaagatagccttgtctgct 191
           |||||  | |||||||||||||||||||| |||||||||||||||||||| || ||||||
Sbjct: 599 catgcgattaagttgcagaagaaagtacggcgtctgggacttaagatagcattatctgct 658

                                                                       
Query: 192 agaacagctgaggggaagctctgcatctttgaggacttagaagtccctagccacaagacg 251
            |||| |||||||| |||||||   ||||||| ||| | ||||| |||||||||||||| 
Sbjct: 659 cgaaccgctgagggaaagctcttggtctttgatgacctcgaagttcctagccacaagaca 718

                                                                       
Query: 252 aaaaacatcgtgcagtacataaagcagatggatgatacgaagaagatattgttggtggat 311
           |||||||| |||||||||||    |||||||| |  || |||||| | |||||||| |||
Sbjct: 719 aaaaacattgtgcagtacattggccagatggaaggcacaaagaaggttttgttggtagat 778

                                                                       
Query: 312 ggaggtgacattgataagaagttaaagctggctactcaaaatcttcactacgtgaatgtc 371
           ||||||||||||||||||||||||||||||||||| || ||||||||||| |||||||| 
Sbjct: 779 ggaggtgacattgataagaagttaaagctggctacccagaatcttcactatgtgaatgtt 838

                                                                       
Query: 372 attccttcgattggcctcaatgtctacagcatcctgcagcatgacacccttgtaatgact 431
            |||| || |||||||| ||||| ||||||||||| || |||||||| |||| |||||| 
Sbjct: 839 cttccatccattggcctaaatgtatacagcatccttcaacatgacactcttgaaatgacg 898

                                                                   
Query: 432 cgggacgccatcaacagaatcgttgagcggatgcacacccccatcagccgctagca 487
           ||| | || ||||| ||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 899 cggaatgctatcaatagaattgttgagcgtatgcacacccccatcagccgctagca 954



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>gb|AC104847.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone
             P0480H08, complete sequence
          Length = 156301

 Score =  147 bits (74), Expect = 5e-32
 Identities = 134/154 (87%)
 Strand = Plus / Plus

                                                                         
Query: 217   tctttgaggacttagaagtccctagccacaagacgaaaaacatcgtgcagtacataaagc 276
             ||||||| ||| | ||||| |||||||||||||| |||||||| |||||||||||    |
Sbjct: 46317 tctttgatgacctcgaagttcctagccacaagacaaaaaacattgtgcagtacattggcc 46376

                                                                         
Query: 277   agatggatgatacgaagaagatattgttggtggatggaggtgacattgataagaagttaa 336
             ||||||| |  || |||||| | |||||||| ||||||||||||||||||||||||||||
Sbjct: 46377 agatggaaggcacaaagaaggttttgttggtagatggaggtgacattgataagaagttaa 46436

                                               
Query: 337   agctggctactcaaaatcttcactacgtgaatgt 370
             |||||||||| || ||||||||||| ||||||||
Sbjct: 46437 agctggctacccagaatcttcactatgtgaatgt 46470



 Score =  125 bits (63), Expect = 2e-25
 Identities = 105/119 (88%)
 Strand = Plus / Plus

                                                                         
Query: 87    cagtttcgaggaggtgcaactatgcatggcccgaaaccacgaagccatgcattcaagttg 146
             |||||||| || |||||||| |||||||| || ||||||||||| |||||  | ||||||
Sbjct: 45412 cagtttcgcggtggtgcaaccatgcatgggcctaaaccacgaagtcatgcgattaagttg 45471

                                                                        
Query: 147   cagaagaaagtacgacgtctgggacttaagatagccttgtctgctagaacagctgaggg 205
             |||||||||||||| |||||||||||||||||||| || |||||| |||| ||||||||
Sbjct: 45472 cagaagaaagtacggcgtctgggacttaagatagcattatctgctcgaaccgctgaggg 45530



 Score =  111 bits (56), Expect = 3e-21
 Identities = 92/104 (88%)
 Strand = Plus / Plus

                                                                         
Query: 384   ggcctcaatgtctacagcatcctgcagcatgacacccttgtaatgactcgggacgccatc 443
             ||||| ||||| ||||||||||| || |||||||| ||||||||||| ||| | || |||
Sbjct: 46583 ggcctaaatgtatacagcatccttcaacatgacactcttgtaatgacgcggaatgctatc 46642

                                                         
Query: 444   aacagaatcgttgagcggatgcacacccccatcagccgctagca 487
             || ||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 46643 aatagaattgttgagcgtatgcacacccccatcagccgctagca 46686



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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  147 bits (74), Expect = 5e-32
 Identities = 134/154 (87%)
 Strand = Plus / Plus

                                                                            
Query: 217      tctttgaggacttagaagtccctagccacaagacgaaaaacatcgtgcagtacataaagc 276
                ||||||| ||| | ||||| |||||||||||||| |||||||| |||||||||||    |
Sbjct: 21288845 tctttgatgacctcgaagttcctagccacaagacaaaaaacattgtgcagtacattggcc 21288904

                                                                            
Query: 277      agatggatgatacgaagaagatattgttggtggatggaggtgacattgataagaagttaa 336
                ||||||| |  || |||||| | |||||||| ||||||||||||||||||||||||||||
Sbjct: 21288905 agatggaaggcacaaagaaggttttgttggtagatggaggtgacattgataagaagttaa 21288964

                                                  
Query: 337      agctggctactcaaaatcttcactacgtgaatgt 370
                |||||||||| || ||||||||||| ||||||||
Sbjct: 21288965 agctggctacccagaatcttcactatgtgaatgt 21288998



 Score =  125 bits (63), Expect = 2e-25
 Identities = 105/119 (88%)
 Strand = Plus / Plus

                                                                            
Query: 87       cagtttcgaggaggtgcaactatgcatggcccgaaaccacgaagccatgcattcaagttg 146
                |||||||| || |||||||| |||||||| || ||||||||||| |||||  | ||||||
Sbjct: 21287940 cagtttcgcggtggtgcaaccatgcatgggcctaaaccacgaagtcatgcgattaagttg 21287999

                                                                           
Query: 147      cagaagaaagtacgacgtctgggacttaagatagccttgtctgctagaacagctgaggg 205
                |||||||||||||| |||||||||||||||||||| || |||||| |||| ||||||||
Sbjct: 21288000 cagaagaaagtacggcgtctgggacttaagatagcattatctgctcgaaccgctgaggg 21288058



 Score =  111 bits (56), Expect = 3e-21
 Identities = 92/104 (88%)
 Strand = Plus / Plus

                                                                            
Query: 384      ggcctcaatgtctacagcatcctgcagcatgacacccttgtaatgactcgggacgccatc 443
                ||||| ||||| ||||||||||| || |||||||| ||||||||||| ||| | || |||
Sbjct: 21289111 ggcctaaatgtatacagcatccttcaacatgacactcttgtaatgacgcggaatgctatc 21289170

                                                            
Query: 444      aacagaatcgttgagcggatgcacacccccatcagccgctagca 487
                || ||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 21289171 aatagaattgttgagcgtatgcacacccccatcagccgctagca 21289214



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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  147 bits (74), Expect = 5e-32
 Identities = 134/154 (87%)
 Strand = Plus / Plus

                                                                            
Query: 217      tctttgaggacttagaagtccctagccacaagacgaaaaacatcgtgcagtacataaagc 276
                ||||||| ||| | ||||| |||||||||||||| |||||||| |||||||||||    |
Sbjct: 21599044 tctttgatgacctcgaagttcctagccacaagacaaaaaacattgtgcagtacattggcc 21599103

                                                                            
Query: 277      agatggatgatacgaagaagatattgttggtggatggaggtgacattgataagaagttaa 336
                ||||||| |  || |||||| | |||||||| ||||||||||||||||||||||||||||
Sbjct: 21599104 agatggaaggcacaaagaaggttttgttggtagatggaggtgacattgataagaagttaa 21599163

                                                  
Query: 337      agctggctactcaaaatcttcactacgtgaatgt 370
                |||||||||| || ||||||||||| ||||||||
Sbjct: 21599164 agctggctacccagaatcttcactatgtgaatgt 21599197



 Score =  125 bits (63), Expect = 2e-25
 Identities = 105/119 (88%)
 Strand = Plus / Plus

                                                                            
Query: 87       cagtttcgaggaggtgcaactatgcatggcccgaaaccacgaagccatgcattcaagttg 146
                |||||||| || |||||||| |||||||| || ||||||||||| |||||  | ||||||
Sbjct: 21598139 cagtttcgcggtggtgcaaccatgcatgggcctaaaccacgaagtcatgcgattaagttg 21598198

                                                                           
Query: 147      cagaagaaagtacgacgtctgggacttaagatagccttgtctgctagaacagctgaggg 205
                |||||||||||||| |||||||||||||||||||| || |||||| |||| ||||||||
Sbjct: 21598199 cagaagaaagtacggcgtctgggacttaagatagcattatctgctcgaaccgctgaggg 21598257



 Score =  111 bits (56), Expect = 3e-21
 Identities = 92/104 (88%)
 Strand = Plus / Plus

                                                                            
Query: 384      ggcctcaatgtctacagcatcctgcagcatgacacccttgtaatgactcgggacgccatc 443
                ||||| ||||| ||||||||||| || |||||||| ||||||||||| ||| | || |||
Sbjct: 21599310 ggcctaaatgtatacagcatccttcaacatgacactcttgtaatgacgcggaatgctatc 21599369

                                                            
Query: 444      aacagaatcgttgagcggatgcacacccccatcagccgctagca 487
                || ||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 21599370 aatagaattgttgagcgtatgcacacccccatcagccgctagca 21599413



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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  127 bits (64), Expect = 5e-26
 Identities = 94/104 (90%)
 Strand = Plus / Plus

                                                                            
Query: 87       cagtttcgaggaggtgcaactatgcatggcccgaaaccacgaagccatgcattcaagttg 146
                |||||||| || ||||||||||||||||| || |||||||||||||||||| ||||||||
Sbjct: 18345327 cagtttcgtggtggtgcaactatgcatggacctaaaccacgaagccatgcaatcaagttg 18345386

                                                            
Query: 147      cagaagaaagtacgacgtctgggacttaagatagccttgtctgc 190
                || ||||| || || ||||||||||| |||||||||||||||||
Sbjct: 18345387 caaaagaaggtccgtcgtctgggactgaagatagccttgtctgc 18345430



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 138/168 (82%)
 Strand = Plus / Plus

                                                                            
Query: 217      tctttgaggacttagaagtccctagccacaagacgaaaaacatcgtgcagtacataaagc 276
                ||||||||||||| ||||| ||||||||||||||||| ||| | |||   || ||||  |
Sbjct: 18346119 tctttgaggacttggaagttcctagccacaagacgaagaacgttgtgagctatataagcc 18346178

                                                                            
Query: 277      agatggatgatacgaagaagatattgttggtggatggaggtgacattgataagaagttaa 336
                ||||||| || || |||||  |  |  |||| |||||||| || || ||||| ||| |||
Sbjct: 18346179 agatggaggacacaaagaaagtgctactggttgatggaggcgatatcgataaaaagctaa 18346238

                                                                
Query: 337      agctggctactcaaaatcttcactacgtgaatgtcattccttcgattg 384
                ||||||||||||||||||| ||||||||||||||  ||||||| ||||
Sbjct: 18346239 agctggctactcaaaatctccactacgtgaatgtgcttccttcaattg 18346286



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 52/55 (94%)
 Strand = Plus / Plus

                                                                       
Query: 29       aaagccttataaacaaaagggaactggaagagcacgtcatggaacattgcgtggt 83
                ||||||||| || ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 18345160 aaagccttacaagcaaaaaggaactggaagagcacgtcatggaacattgcgtggt 18345214



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 85/100 (85%)
 Strand = Plus / Plus

                                                                            
Query: 387      ctcaatgtctacagcatcctgcagcatgacacccttgtaatgactcgggacgccatcaac 446
                ||||| |||||||||||||| |||||||||||||| ||||||||||| || ||  | || 
Sbjct: 18346427 ctcaacgtctacagcatcctccagcatgacaccctcgtaatgactcgcgatgctgtgaat 18346486

                                                        
Query: 447      agaatcgttgagcggatgcacacccccatcagccgctagc 486
                 | || |||||||| ||||| |||||||||| ||||||||
Sbjct: 18346487 cggattgttgagcgaatgcatacccccatcaaccgctagc 18346526



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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  127 bits (64), Expect = 5e-26
 Identities = 94/104 (90%)
 Strand = Plus / Plus

                                                                            
Query: 87       cagtttcgaggaggtgcaactatgcatggcccgaaaccacgaagccatgcattcaagttg 146
                |||||||| || ||||||||||||||||| || |||||||||||||||||| ||||||||
Sbjct: 18271648 cagtttcgtggtggtgcaactatgcatggacctaaaccacgaagccatgcaatcaagttg 18271707

                                                            
Query: 147      cagaagaaagtacgacgtctgggacttaagatagccttgtctgc 190
                || ||||| || || ||||||||||| |||||||||||||||||
Sbjct: 18271708 caaaagaaggtccgtcgtctgggactgaagatagccttgtctgc 18271751



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 138/168 (82%)
 Strand = Plus / Plus

                                                                            
Query: 217      tctttgaggacttagaagtccctagccacaagacgaaaaacatcgtgcagtacataaagc 276
                ||||||||||||| ||||| ||||||||||||||||| ||| | |||   || ||||  |
Sbjct: 18272440 tctttgaggacttggaagttcctagccacaagacgaagaacgttgtgagctatataagcc 18272499

                                                                            
Query: 277      agatggatgatacgaagaagatattgttggtggatggaggtgacattgataagaagttaa 336
                ||||||| || || |||||  |  |  |||| |||||||| || || ||||| ||| |||
Sbjct: 18272500 agatggaggacacaaagaaagtgctactggttgatggaggcgatatcgataaaaagctaa 18272559

                                                                
Query: 337      agctggctactcaaaatcttcactacgtgaatgtcattccttcgattg 384
                ||||||||||||||||||| ||||||||||||||  ||||||| ||||
Sbjct: 18272560 agctggctactcaaaatctccactacgtgaatgtgcttccttcaattg 18272607



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 52/55 (94%)
 Strand = Plus / Plus

                                                                       
Query: 29       aaagccttataaacaaaagggaactggaagagcacgtcatggaacattgcgtggt 83
                ||||||||| || ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 18271481 aaagccttacaagcaaaaaggaactggaagagcacgtcatggaacattgcgtggt 18271535



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 85/100 (85%)
 Strand = Plus / Plus

                                                                            
Query: 387      ctcaatgtctacagcatcctgcagcatgacacccttgtaatgactcgggacgccatcaac 446
                ||||| |||||||||||||| |||||||||||||| ||||||||||| || ||  | || 
Sbjct: 18272748 ctcaacgtctacagcatcctccagcatgacaccctcgtaatgactcgcgatgctgtgaat 18272807

                                                        
Query: 447      agaatcgttgagcggatgcacacccccatcagccgctagc 486
                 | || |||||||| ||||| |||||||||| ||||||||
Sbjct: 18272808 cggattgttgagcgaatgcatacccccatcaaccgctagc 18272847



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>emb|AL831799.3|CNS08CAC Oryza sativa chromosome 12, . BAC OSJNBa0087A02 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 177034

 Score =  127 bits (64), Expect = 5e-26
 Identities = 94/104 (90%)
 Strand = Plus / Minus

                                                                         
Query: 87    cagtttcgaggaggtgcaactatgcatggcccgaaaccacgaagccatgcattcaagttg 146
             |||||||| || ||||||||||||||||| || |||||||||||||||||| ||||||||
Sbjct: 25667 cagtttcgtggtggtgcaactatgcatggacctaaaccacgaagccatgcaatcaagttg 25608

                                                         
Query: 147   cagaagaaagtacgacgtctgggacttaagatagccttgtctgc 190
             || ||||| || || ||||||||||| |||||||||||||||||
Sbjct: 25607 caaaagaaggtccgtcgtctgggactgaagatagccttgtctgc 25564



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 138/168 (82%)
 Strand = Plus / Minus

                                                                         
Query: 217   tctttgaggacttagaagtccctagccacaagacgaaaaacatcgtgcagtacataaagc 276
             ||||||||||||| ||||| ||||||||||||||||| ||| | |||   || ||||  |
Sbjct: 24875 tctttgaggacttggaagttcctagccacaagacgaagaacgttgtgagctatataagcc 24816

                                                                         
Query: 277   agatggatgatacgaagaagatattgttggtggatggaggtgacattgataagaagttaa 336
             ||||||| || || |||||  |  |  |||| |||||||| || || ||||| ||| |||
Sbjct: 24815 agatggaggacacaaagaaagtgctactggttgatggaggcgatatcgataaaaagctaa 24756

                                                             
Query: 337   agctggctactcaaaatcttcactacgtgaatgtcattccttcgattg 384
             ||||||||||||||||||| ||||||||||||||  ||||||| ||||
Sbjct: 24755 agctggctactcaaaatctccactacgtgaatgtgcttccttcaattg 24708



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 52/55 (94%)
 Strand = Plus / Minus

                                                                    
Query: 29    aaagccttataaacaaaagggaactggaagagcacgtcatggaacattgcgtggt 83
             ||||||||| || ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 25834 aaagccttacaagcaaaaaggaactggaagagcacgtcatggaacattgcgtggt 25780



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 85/100 (85%)
 Strand = Plus / Minus

                                                                         
Query: 387   ctcaatgtctacagcatcctgcagcatgacacccttgtaatgactcgggacgccatcaac 446
             ||||| |||||||||||||| |||||||||||||| ||||||||||| || ||  | || 
Sbjct: 24567 ctcaacgtctacagcatcctccagcatgacaccctcgtaatgactcgcgatgctgtgaat 24508

                                                     
Query: 447   agaatcgttgagcggatgcacacccccatcagccgctagc 486
              | || |||||||| ||||| |||||||||| ||||||||
Sbjct: 24507 cggattgttgagcgaatgcatacccccatcaaccgctagc 24468



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>emb|AJ293490.1|SHY293490 Saccharum hybrid cultivar R570 microsatellite DNA, clone mSSCIR18
          Length = 659

 Score =  115 bits (58), Expect = 2e-22
 Identities = 76/82 (92%)
 Strand = Plus / Minus

                                                                       
Query: 408 cagcatgacacccttgtaatgactcgggacgccatcaacagaatcgttgagcggatgcac 467
           ||||||||||||||||||||||||||||  || |||||||||||||| ||||||||||| 
Sbjct: 657 cagcatgacacccttgtaatgactcgggctgctatcaacagaatcgtcgagcggatgcat 598

                                 
Query: 468 acccccatcagccgctagcaag 489
           |||||||||| |||||||||||
Sbjct: 597 acccccatcaaccgctagcaag 576



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>gb|BT012933.1| Lycopersicon esculentum clone 114096R, mRNA sequence
          Length = 1349

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 67/77 (87%)
 Strand = Plus / Plus

                                                                       
Query: 66  catggaacattgcgtggttgtcagtttcgaggaggtgcaactatgcatggcccgaaacca 125
           ||||||||| ||||||||  |||||||||||| ||||| ||||||||||| || ||||| 
Sbjct: 649 catggaacactgcgtggtcctcagtttcgaggtggtgccactatgcatggtccaaaaccg 708

                            
Query: 126 cgaagccatgcattcaa 142
           ||||| |||||| ||||
Sbjct: 709 cgaagtcatgcaatcaa 725



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>gb|AC080068.6| Homo sapiens BAC clone RP11-97L4 from 7, complete sequence
          Length = 62623

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 347  tcaaaatcttcactacgtgaatgt 370
            ||||||||||||||||||||||||
Sbjct: 6016 tcaaaatcttcactacgtgaatgt 5993



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>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 30     aagccttataaacaaaagggaactgg 55
              ||||||| ||||||||||||||||||
Sbjct: 279994 aagccttttaaacaaaagggaactgg 280019



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>gb|AC068950.11| Oryza sativa chromosome 10 BAC OSJNBa0041P03 genomic sequence, complete
             sequence
          Length = 139614

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 580   agcaggccaaagtgcagcccaa 601
             ||||||||||||||||||||||
Sbjct: 71931 agcaggccaaagtgcagcccaa 71910



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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 580      agcaggccaaagtgcagcccaa 601
                ||||||||||||||||||||||
Sbjct: 18279239 agcaggccaaagtgcagcccaa 18279260



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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 580      agcaggccaaagtgcagcccaa 601
                ||||||||||||||||||||||
Sbjct: 18288492 agcaggccaaagtgcagcccaa 18288513



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>gb|AC120856.6| Mus musculus chromosome 1, clone RP23-284B21, complete sequence
          Length = 261249

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 294    aagatattgttggtggatgga 314
              |||||||||||||||||||||
Sbjct: 114096 aagatattgttggtggatgga 114076



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>gb|AC154121.6| Mus musculus chromosome 1, clone RP24-93A17, complete sequence
          Length = 228353

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 294   aagatattgttggtggatgga 314
             |||||||||||||||||||||
Sbjct: 51364 aagatattgttggtggatgga 51384



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>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 267     tacataaagcagatggatga 286
               ||||||||||||||||||||
Sbjct: 3005447 tacataaagcagatggatga 3005428



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>gb|AC160992.2| Mus musculus BAC clone RP23-147I23 from chromosome 9, complete sequence
          Length = 215980

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 33    ccttataaacaaaagggaac 52
             ||||||||||||||||||||
Sbjct: 94900 ccttataaacaaaagggaac 94881



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>gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-27, complete genome
          Length = 5237682

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 286     atacgaagaagatattgttg 305
               ||||||||||||||||||||
Sbjct: 1227830 atacgaagaagatattgttg 1227849



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>ref|XM_744313.1| Aspergillus fumigatus Af293 60S ribosomal protein Rlp24
           (Afu2g02710) partial mRNA
          Length = 567

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 299 attgttggtggatggaggtg 318
           ||||||||||||||||||||
Sbjct: 522 attgttggtggatggaggtg 541



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>gb|AY208121.1| Sus scrofa myostatin gene, complete cds
          Length = 167404

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 138   ttcaagttgcagaagaaagt 157
             ||||||||||||||||||||
Sbjct: 22430 ttcaagttgcagaagaaagt 22411



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>emb|BX511184.11| Zebrafish DNA sequence from clone DKEY-103A3 in linkage group 24,
              complete sequence
          Length = 209735

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 182    cttgtctgctagaacagctg 201
              ||||||||||||||||||||
Sbjct: 135323 cttgtctgctagaacagctg 135342



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>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome
          Length = 6260361

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 282     gatgatacgaagaagatatt 301
               ||||||||||||||||||||
Sbjct: 1646342 gatgatacgaagaagatatt 1646323



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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 546     ttttggtacaacagctctgatcac 569
               |||||||||||||||||| |||||
Sbjct: 4366849 ttttggtacaacagctcttatcac 4366826



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>gb|AC023399.4|AC023399 Homo sapiens chromosome 17, clone RP11-780O8, complete sequence
          Length = 175446

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 290   gaagaagatattgttggtgg 309
             ||||||||||||||||||||
Sbjct: 40359 gaagaagatattgttggtgg 40340



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>gb|AC124283.11| Homo sapiens chromosome 17, clone RP13-638C3, complete sequence
          Length = 143744

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 324   gataagaagttaaagctggc 343
             ||||||||||||||||||||
Sbjct: 41774 gataagaagttaaagctggc 41793



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>gb|AC005177.1|AC005177 Homo sapiens chromosome 17, clone HCIT462L7, complete sequence
          Length = 142278

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 290   gaagaagatattgttggtgg 309
             ||||||||||||||||||||
Sbjct: 58515 gaagaagatattgttggtgg 58534



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>dbj|AP006441.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:B1279D09
          Length = 134793

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 546   ttttggtacaacagctctgatcac 569
             |||||||||||||||||| |||||
Sbjct: 69667 ttttggtacaacagctcttatcac 69644



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>emb|CT025751.20| Mouse DNA sequence from clone RP24-365A12 on chromosome 9, complete
              sequence
          Length = 176584

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 193    gaacagctgaggggaagctctgca 216
              |||||||||||| |||||||||||
Sbjct: 155653 gaacagctgaggtgaagctctgca 155676



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>gb|AF091008.1|AF091008 Tick-borne encephalitis virus strain Crimea polyprotein gene,
           partial cds
          Length = 1488

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 194 aacagctgaggggaagctct 213
           ||||||||||||||||||||
Sbjct: 99  aacagctgaggggaagctct 118



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>emb|CT030635.8| Mouse DNA sequence from clone RP23-94N7 on chromosome 9, complete
              sequence
          Length = 228508

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 33     ccttataaacaaaagggaac 52
              ||||||||||||||||||||
Sbjct: 219980 ccttataaacaaaagggaac 219961


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,632,142
Number of Sequences: 3902068
Number of extensions: 4632142
Number of successful extensions: 75921
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 75613
Number of HSP's gapped (non-prelim): 304
length of query: 614
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 591
effective length of database: 17,143,297,704
effective search space: 10131688943064
effective search space used: 10131688943064
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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