>gb|AC122143.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
              OSJNBa0090F16, complete sequence
          Length = 147341

 Score =  186 bits (94), Expect = 3e-44
 Identities = 153/174 (87%)
 Strand = Plus / Minus

                                                                          
Query: 124    agcaacacactattcagagagttttccttaatancaatgaggagagtccctgacctacca 183
              ||||||||||||||||||||||||||| | ||| ||||||||||||| ||||| ||||||
Sbjct: 143363 agcaacacactattcagagagttttccctgatatcaatgaggagagttcctgagctacca 143304

                                                                          
Query: 184    ntaggaccacataagntgcttgccatccttgctgaaccattgaaacaaaaggaaaattta 243
               |||||||||| ||| ||||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 143303 gtaggaccacacaagttgcttgccatcctggctgaaccattgaaacaaaaagaaaattta 143244

                                                                    
Query: 244    ttttcgctggaagatcaagaggtttctgatnacttagaagagtttgaagattgg 297
               |||| || |||||||  ||||| |||||| | |||   |||||||||||||||
Sbjct: 143243 atttcactcgaagatcctgaggtatctgataatttacgggagtttgaagattgg 143190



 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 87/101 (86%)
 Strand = Plus / Minus

                                                                          
Query: 22     cagaaggcaatgatcattcagtggctttgcttcacaccaccatcctcaattccaggctnt 81
              ||||| |||| | ||||||||||||||||||||||||| |||||||| |||||||  | |
Sbjct: 143626 cagaaagcaacggtcattcagtggctttgcttcacaccgccatcctcgattccagatttt 143567

                                                       
Query: 82     gagatgatcacagggaaacttctgatacgggcattgatgca 122
               |||||||||  || || ||||||||||||||| |||||||
Sbjct: 143566 cagatgatcagtggaaagcttctgatacgggcactgatgca 143526



 Score = 44.1 bits (22), Expect = 0.28
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 301    gaatattactccctggatgcaacataccgg 330
              |||||||||||||||||||| || ||||||
Sbjct: 143069 gaatattactccctggatgctacttaccgg 143040

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  186 bits (94), Expect = 3e-44
 Identities = 153/174 (87%)
 Strand = Plus / Plus

                                                                            
Query: 124      agcaacacactattcagagagttttccttaatancaatgaggagagtccctgacctacca 183
                ||||||||||||||||||||||||||| | ||| ||||||||||||| ||||| ||||||
Sbjct: 24679125 agcaacacactattcagagagttttccctgatatcaatgaggagagttcctgagctacca 24679184

                                                                            
Query: 184      ntaggaccacataagntgcttgccatccttgctgaaccattgaaacaaaaggaaaattta 243
                 |||||||||| ||| ||||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 24679185 gtaggaccacacaagttgcttgccatcctggctgaaccattgaaacaaaaagaaaattta 24679244

                                                                      
Query: 244      ttttcgctggaagatcaagaggtttctgatnacttagaagagtttgaagattgg 297
                 |||| || |||||||  ||||| |||||| | |||   |||||||||||||||
Sbjct: 24679245 atttcactcgaagatcctgaggtatctgataatttacgggagtttgaagattgg 24679298



 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 87/101 (86%)
 Strand = Plus / Plus

                                                                            
Query: 22       cagaaggcaatgatcattcagtggctttgcttcacaccaccatcctcaattccaggctnt 81
                ||||| |||| | ||||||||||||||||||||||||| |||||||| |||||||  | |
Sbjct: 24678862 cagaaagcaacggtcattcagtggctttgcttcacaccgccatcctcgattccagatttt 24678921

                                                         
Query: 82       gagatgatcacagggaaacttctgatacgggcattgatgca 122
                 |||||||||  || || ||||||||||||||| |||||||
Sbjct: 24678922 cagatgatcagtggaaagcttctgatacgggcactgatgca 24678962



 Score = 44.1 bits (22), Expect = 0.28
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                              
Query: 301      gaatattactccctggatgcaacataccgg 330
                |||||||||||||||||||| || ||||||
Sbjct: 24679419 gaatattactccctggatgctacttaccgg 24679448

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  186 bits (94), Expect = 3e-44
 Identities = 153/174 (87%)
 Strand = Plus / Plus

                                                                            
Query: 124      agcaacacactattcagagagttttccttaatancaatgaggagagtccctgacctacca 183
                ||||||||||||||||||||||||||| | ||| ||||||||||||| ||||| ||||||
Sbjct: 24990795 agcaacacactattcagagagttttccctgatatcaatgaggagagttcctgagctacca 24990854

                                                                            
Query: 184      ntaggaccacataagntgcttgccatccttgctgaaccattgaaacaaaaggaaaattta 243
                 |||||||||| ||| ||||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 24990855 gtaggaccacacaagttgcttgccatcctggctgaaccattgaaacaaaaagaaaattta 24990914

                                                                      
Query: 244      ttttcgctggaagatcaagaggtttctgatnacttagaagagtttgaagattgg 297
                 |||| || |||||||  ||||| |||||| | |||   |||||||||||||||
Sbjct: 24990915 atttcactcgaagatcctgaggtatctgataatttacgggagtttgaagattgg 24990968



 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 87/101 (86%)
 Strand = Plus / Plus

                                                                            
Query: 22       cagaaggcaatgatcattcagtggctttgcttcacaccaccatcctcaattccaggctnt 81
                ||||| |||| | ||||||||||||||||||||||||| |||||||| |||||||  | |
Sbjct: 24990532 cagaaagcaacggtcattcagtggctttgcttcacaccgccatcctcgattccagatttt 24990591

                                                         
Query: 82       gagatgatcacagggaaacttctgatacgggcattgatgca 122
                 |||||||||  || || ||||||||||||||| |||||||
Sbjct: 24990592 cagatgatcagtggaaagcttctgatacgggcactgatgca 24990632



 Score = 44.1 bits (22), Expect = 0.28
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                              
Query: 301      gaatattactccctggatgcaacataccgg 330
                |||||||||||||||||||| || ||||||
Sbjct: 24991089 gaatattactccctggatgctacttaccgg 24991118

>gb|AY109734.1| Zea mays CL29271_1 mRNA sequence
          Length = 1457

 Score =  180 bits (91), Expect = 2e-42
 Identities = 178/207 (85%), Gaps = 1/207 (0%)
 Strand = Plus / Plus

                                                                        
Query: 3    catcacctgcaagcactttcagaaggcaatgatcattcagtggctttgcttcacaccacc 62
            |||||||||||| ||||| || ||||| ||| | ||||||||||||||||||||||||||
Sbjct: 1021 catcacctgcaatcactt-caaaaggctatggttattcagtggctttgcttcacaccacc 1079

                                                                        
Query: 63   atcctcaattccaggctntgagatgatcacagggaaacttctgatacgggcattgatgca 122
            |||||| ||||||| || | | |||||||  ||||| |||||||||||||||||||  ||
Sbjct: 1080 atcctcgattccagactttcaaatgatcagtgggaagcttctgatacgggcattgacaca 1139

                                                                        
Query: 123  tagcaacacactattcagagagttttccttaatancaatgaggagagtccctgacctacc 182
            |||||| ||||| ||||| ||||||||  | ||| ||||||||||||||||||| |||||
Sbjct: 1140 tagcaatacactgttcagggagttttctctgatatcaatgaggagagtccctgagctacc 1199

                                       
Query: 183  antaggaccacataagntgcttgccat 209
            |  ||| ||||| ||| ||||||||||
Sbjct: 1200 agcagggccacacaagttgcttgccat 1226



 Score = 56.0 bits (28), Expect = 7e-05
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                            
Query: 283  gagtttgaagattggcacgaatattactccct 314
            ||||||||||||||||| ||||||||||||||
Sbjct: 1300 gagtttgaagattggcatgaatattactccct 1331

>emb|Z82209.2|HS428A13 Human DNA sequence from clone RP3-428A13 on chromosome X Contains a
              intracellular membrane-associated calcium-independent
              phospholipase A2 (IPLA2) pseudogene, complete sequence
          Length = 154235

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 226    aaacaaaaggaaaatttatttt 247
              ||||||||||||||||||||||
Sbjct: 129159 aaacaaaaggaaaatttatttt 129138

>ref|NM_180250.1| Arabidopsis thaliana unknown protein AT3G14120 transcript variant
            AT3G14120.2 mRNA, complete cds
          Length = 3596

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                             
Query: 115  ttgatgcatagcaacacactattcagagagttt 147
            |||||||| ||||||| ||| ||||||||||||
Sbjct: 2385 ttgatgcacagcaacatacttttcagagagttt 2417

>ref|NM_112268.2| Arabidopsis thaliana unknown protein AT3G14120 transcript variant
            AT3G14120.1 mRNA, complete cds
          Length = 3668

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                             
Query: 115  ttgatgcatagcaacacactattcagagagttt 147
            |||||||| ||||||| ||| ||||||||||||
Sbjct: 2385 ttgatgcacagcaacatacttttcagagagttt 2417

>gb|U41557.1| Caenorhabditis elegans cosmid C50F7, complete sequence
          Length = 31414

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 222   attgaaacaaaaggaaaattt 242
             |||||||||||||||||||||
Sbjct: 18746 attgaaacaaaaggaaaattt 18726

>gb|AC117199.3| Mus musculus BAC clone RP23-134L22 from 10, complete sequence
          Length = 210514

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 132    actattcagagagttttcctt 152
              |||||||||||||||||||||
Sbjct: 173868 actattcagagagttttcctt 173848

>ref|XM_644945.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (250.t00020)
           partial mRNA
          Length = 648

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 220 ccattgaaacaaaaggaaaat 240
           |||||||||||||||||||||
Sbjct: 529 ccattgaaacaaaaggaaaat 549

>emb|AL162735.41| Human DNA sequence from clone RP11-255E17 on chromosome 1 Contains the
             gene for PTPL1-associated RhoGAP 1 (PARG1), a novel gene,
             a glyceraldehyde-3-phosphate dehydrogenase (GAPD)
             pseudogene and the 3' end of a novel gene, complete
             sequence
          Length = 160535

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 225   gaaacaaaaggaaaatttatt 245
             |||||||||||||||||||||
Sbjct: 32734 gaaacaaaaggaaaatttatt 32754

>gb|AY139761.1| Arabidopsis thaliana AT3g14120/MAG2_7 mRNA, complete cds
          Length = 3669

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                             
Query: 115  ttgatgcatagcaacacactattcagagagttt 147
            |||||||| ||||||| ||| ||||||||||||
Sbjct: 2385 ttgatgcacagcaacatacttttcagagagttt 2417

>gb|BT006367.1| Arabidopsis thaliana AT3g14120/MAG2_7 gene, complete cds
          Length = 3234

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                             
Query: 115  ttgatgcatagcaacacactattcagagagttt 147
            |||||||| ||||||| ||| ||||||||||||
Sbjct: 2206 ttgatgcacagcaacatacttttcagagagttt 2238

>emb|BX822747.1|CNS0A4PQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB61ZB11 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 2006

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 115 ttgatgcatagcaacacactattcagagagttt 147
           |||||||| ||||||| ||| ||||||||||||
Sbjct: 779 ttgatgcacagcaacatacttttcagagagttt 811

>gb|AC122472.5| Mus musculus BAC clone RP24-323G20 from chromosome 10, complete sequence
          Length = 180612

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 132    actattcagagagttttcctt 152
              |||||||||||||||||||||
Sbjct: 167816 actattcagagagttttcctt 167836

>emb|AL833445.1|HSM804758 Homo sapiens mRNA; cDNA DKFZp686C21109 (from clone DKFZp686C21109)
          Length = 8491

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 225  gaaacaaaaggaaaatttatt 245
            |||||||||||||||||||||
Sbjct: 2831 gaaacaaaaggaaaatttatt 2811

>gb|AC158164.3| Mus musculus BAC clone RP23-457E24 from chromosome 13, complete
             sequence
          Length = 137550

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 88    atcacagggaaacttctgat 107
             ||||||||||||||||||||
Sbjct: 69038 atcacagggaaacttctgat 69019

>gb|AC102497.7| Mus musculus chromosome 18, clone RP24-570C15, complete sequence
          Length = 165977

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 222   attgaaacaaaaggaaaatt 241
             ||||||||||||||||||||
Sbjct: 60269 attgaaacaaaaggaaaatt 60250

>gb|AC102228.8| Mus musculus chromosome 13, clone RP24-64M1, complete sequence
          Length = 201286

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 88     atcacagggaaacttctgat 107
              ||||||||||||||||||||
Sbjct: 146993 atcacagggaaacttctgat 147012

>gb|AC122914.4| Mus musculus BAC clone RP23-26F9 from 15, complete sequence
          Length = 207417

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 228  acaaaaggaaaatttatttt 247
            ||||||||||||||||||||
Sbjct: 8100 acaaaaggaaaatttatttt 8081

>emb|AL670769.3| Mouse DNA sequence from clone RP23-375J5 on chromosome 4 Contains
          two novel genes and a nudix (nucleoside diphosphate
          linked moiety X)-type motif (Nudt) pseudogene, complete
          sequence
          Length = 180238

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 13 aagcactttcagaaggcaat 32
          ||||||||||||||||||||
Sbjct: 85 aagcactttcagaaggcaat 66

>gb|AC106753.3| Homo sapiens chromosome 5 clone RP11-174H5, complete sequence
          Length = 95620

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 280  gaagagtttgaagattggca 299
            ||||||||||||||||||||
Sbjct: 2143 gaagagtttgaagattggca 2162

>emb|AL592283.5| Mouse DNA sequence from clone RP23-386C23 on chromosome 4, complete
              sequence
          Length = 197763

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 13     aagcactttcagaaggcaat 32
              ||||||||||||||||||||
Sbjct: 195848 aagcactttcagaaggcaat 195829

>gb|AC106791.4| Homo sapiens chromosome 5 clone RP11-381K20, complete sequence
          Length = 216877

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 280  gaagagtttgaagattggca 299
            ||||||||||||||||||||
Sbjct: 1407 gaagagtttgaagattggca 1388

>gb|AC003683.2| Homo sapiens x BAC RP1-147H15 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 127683

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 276   cttagaagagtttgaagatt 295
             ||||||||||||||||||||
Sbjct: 46691 cttagaagagtttgaagatt 46672

>gb|AC160826.2| Xenopus tropicalis BAC clone ISB1-175O7 containing 5' end of dickkopf2
             gene, complete sequence
          Length = 75660

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 229   caaaaggaaaatttattttc 248
             ||||||||||||||||||||
Sbjct: 61195 caaaaggaaaatttattttc 61176

>emb|BX511060.7| Zebrafish DNA sequence from clone CH211-210L19 in linkage group 10,
            complete sequence
          Length = 139250

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 286  tttgaagattggcacgaata 305
            ||||||||||||||||||||
Sbjct: 7538 tttgaagattggcacgaata 7519

>gb|AC006084.1|AC006084 Homo sapiens chromosome 5, Pac clone 9c13 (LBNL H127), complete
             sequence
          Length = 121739

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 280   gaagagtttgaagattggca 299
             ||||||||||||||||||||
Sbjct: 55597 gaagagtttgaagattggca 55616

>gb|AC004820.2|AC004820 Homo sapiens clone DJ0038I10, complete sequence
          Length = 139966

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 280   gaagagtttgaagattggca 299
             ||||||||||||||||||||
Sbjct: 15157 gaagagtttgaagattggca 15138

>gb|AC004070.1|AC004070 Human Chromosome X, complete sequence
          Length = 110192

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 224   tgaaacaaaaggaaaattta 243
             ||||||||||||||||||||
Sbjct: 43072 tgaaacaaaaggaaaattta 43091

>gb|AC170913.2| Mus musculus BAC clone RP23-197F6 from chromosome 13, complete sequence
          Length = 199317

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 88    atcacagggaaacttctgat 107
             ||||||||||||||||||||
Sbjct: 40602 atcacagggaaacttctgat 40621


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,161,733
Number of Sequences: 3902068
Number of extensions: 3161733
Number of successful extensions: 61566
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 61440
Number of HSP's gapped (non-prelim): 125
length of query: 333
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 311
effective length of database: 17,147,199,772
effective search space: 5332779129092
effective search space used: 5332779129092
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)