| Clone Name | bags12a10 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY104314.1| Zea mays PCO075251 mRNA sequence Length = 1241 Score = 533 bits (269), Expect = e-148 Identities = 461/525 (87%) Strand = Plus / Plus Query: 22 ccgccatgtcgccgtctctgctcggggggctcaccaagtcgctggccatgatcgtgctct 81 |||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||| Sbjct: 132 ccgccatggcgccgtctctgctcgggggcttcaccaagtcgctggccatgacggtgctct 191 Query: 82 ccgaggtcggggacaagaccttcttcgccgccgcgattctggccatgcgccatccccgga 141 ||||||||||||||||||||||||||||||||||||| |||| |||||||||||| ||| Sbjct: 192 ccgaggtcggggacaagaccttcttcgccgccgcgatattggctatgcgccatcccagga 251 Query: 142 agctcgtcctggctggctgtctatcggcattaacagtgatgacggctttatctgcttctc 201 | || |||||||| |||||| | | ||| ||| ||||||||| ||| |||| ||||||| Sbjct: 252 aactggtcctggcaggctgtttgactgcactaatagtgatgacagctctatcagcttctc 311 Query: 202 tcggctgggttgcacctaatctgatatcacgtaaatggactcatcatatcacgactctgc 261 | || ||||||||||| |||||||| ||||||||||||||||||||| | || ||||| Sbjct: 312 taggttgggttgcaccaaatctgatttcacgtaaatggactcatcatgtgaccactctat 371 Query: 262 tgttctttgtgtttggcatctggtcattgtgggaaggcttcaaagaagaaggagagtcag 321 |||||||||| ||||| || ||||||||||||||||||||||| ||||| ||||| |||| Sbjct: 372 tgttctttgtatttggtatttggtcattgtgggaaggcttcaaggaagatggagattcag 431 Query: 322 aagacttggctgaattggaagcaaagctggatgcggactttaagagcaacaaaggggaat 381 |||| ||||||||| | |||||| |||||||||| | ||||||||| || ||||| |||| Sbjct: 432 aagaattggctgaagttgaagcagagctggatgctgtctttaagagtaataaaggcgaat 491 Query: 382 caaaaaataaatcaaaggcaactgaggatacaaagaaaaagcaaaggccatttctcatgc 441 | |||| |||| | ||||||| || ||||| |||||| ||||||| ||||||||||||| Sbjct: 492 ctaaaactaaaactaaggcaaacgatgatacgaagaaacagcaaagaccatttctcatgc 551 Query: 442 agttcttctcaccaatttttatcaaggcattttccatcactttctttggcgagtggggtg 501 | ||||||||||||||||| || ||||||||||| || || |||||||| |||||||||| Sbjct: 552 aattcttctcaccaattttcataaaggcattttctattacattctttggtgagtggggtg 611 Query: 502 acaagagccagattgctacgattggcttggctgctgatgagaacc 546 ||||||||||||||||||| |||||||||||||||||||| |||| Sbjct: 612 acaagagccagattgctactattggcttggctgctgatgaaaacc 656
>ref|XM_482544.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1278 Score = 515 bits (260), Expect = e-143 Identities = 455/520 (87%) Strand = Plus / Plus Query: 22 ccgccatgtcgccgtctctgctcggggggctcaccaagtcgctggccatgatcgtgctct 81 |||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||||| Sbjct: 98 ccgccatggcgccgtctctgctcggggggttcaccaagtcgctggccatgacggtgctct 157 Query: 82 ccgaggtcggggacaagaccttcttcgccgccgcgattctggccatgcgccatccccgga 141 | ||| |||| ||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 158 cggagatcggcgacaagaccttcttcgccgccgcgattctggccatgcgctatccccgga 217 Query: 142 agctcgtcctggctggctgtctatcggcattaacagtgatgacggctttatctgcttctc 201 |||| || || ||||| ||||| | |||||||||||||||||||| |||| | ||| | Sbjct: 218 agcttgttcttgctggttgtctcacctcattaacagtgatgacggctctatcagtttcac 277 Query: 202 tcggctgggttgcacctaatctgatatcacgtaaatggactcatcatatcacgactctgc 261 | || |||||||| || |||||||||||||| ||||||||||||||| | || ||||||| Sbjct: 278 ttggttgggttgcgccaaatctgatatcacgcaaatggactcatcatgtgaccactctgc 337 Query: 262 tgttctttgtgtttggcatctggtcattgtgggaaggcttcaaagaagaaggagagtcag 321 | ||||||||||||||||| | ||||||||||||||||||||||||||| ||||| |||| Sbjct: 338 tattctttgtgtttggcattttgtcattgtgggaaggcttcaaagaagatggagattcag 397 Query: 322 aagacttggctgaattggaagcaaagctggatgcggactttaagagcaacaaaggggaat 381 |||| ||||||||| ||||||| |||||||||| | ||||| |||||||||| |||| Sbjct: 398 aagaattggctgaagtggaagctgagctggatgctaattttaaaagcaacaaagcagaat 457 Query: 382 caaaaaataaatcaaaggcaactgaggatacaaagaaaaagcaaaggccatttctcatgc 441 | |||| |||||| ||||||| ||| |||| |||||| ||||||| |||||| | ||| Sbjct: 458 cgaaaagtaaatctaaggcaaatgatgataaaaagaagcagcaaagaccatttgttttgc 517 Query: 442 agttcttctcaccaatttttatcaaggcattttccatcactttctttggcgagtggggtg 501 |||||||||||||||| ||||| |||||||||||||| || |||||||| |||||||||| Sbjct: 518 agttcttctcaccaatctttataaaggcattttccattacattctttggagagtggggtg 577 Query: 502 acaagagccagattgctacgattggcttggctgctgatga 541 | ||||| || |||||||| ||||| |||||||||||||| Sbjct: 578 ataagagtcaaattgctactattggtttggctgctgatga 617
>dbj|AK066308.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013061I19, full insert sequence Length = 1279 Score = 515 bits (260), Expect = e-143 Identities = 455/520 (87%) Strand = Plus / Plus Query: 22 ccgccatgtcgccgtctctgctcggggggctcaccaagtcgctggccatgatcgtgctct 81 |||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||||| Sbjct: 98 ccgccatggcgccgtctctgctcggggggttcaccaagtcgctggccatgacggtgctct 157 Query: 82 ccgaggtcggggacaagaccttcttcgccgccgcgattctggccatgcgccatccccgga 141 | ||| |||| ||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 158 cggagatcggcgacaagaccttcttcgccgccgcgattctggccatgcgctatccccgga 217 Query: 142 agctcgtcctggctggctgtctatcggcattaacagtgatgacggctttatctgcttctc 201 |||| || || ||||| ||||| | |||||||||||||||||||| |||| | ||| | Sbjct: 218 agcttgttcttgctggttgtctcacctcattaacagtgatgacggctctatcagtttcac 277 Query: 202 tcggctgggttgcacctaatctgatatcacgtaaatggactcatcatatcacgactctgc 261 | || |||||||| || |||||||||||||| ||||||||||||||| | || ||||||| Sbjct: 278 ttggttgggttgcgccaaatctgatatcacgcaaatggactcatcatgtgaccactctgc 337 Query: 262 tgttctttgtgtttggcatctggtcattgtgggaaggcttcaaagaagaaggagagtcag 321 | ||||||||||||||||| | ||||||||||||||||||||||||||| ||||| |||| Sbjct: 338 tattctttgtgtttggcattttgtcattgtgggaaggcttcaaagaagatggagattcag 397 Query: 322 aagacttggctgaattggaagcaaagctggatgcggactttaagagcaacaaaggggaat 381 |||| ||||||||| ||||||| |||||||||| | ||||| |||||||||| |||| Sbjct: 398 aagaattggctgaagtggaagctgagctggatgctaattttaaaagcaacaaagcagaat 457 Query: 382 caaaaaataaatcaaaggcaactgaggatacaaagaaaaagcaaaggccatttctcatgc 441 | |||| |||||| ||||||| ||| |||| |||||| ||||||| |||||| | ||| Sbjct: 458 cgaaaagtaaatctaaggcaaatgatgataaaaagaagcagcaaagaccatttgttttgc 517 Query: 442 agttcttctcaccaatttttatcaaggcattttccatcactttctttggcgagtggggtg 501 |||||||||||||||| ||||| |||||||||||||| || |||||||| |||||||||| Sbjct: 518 agttcttctcaccaatctttataaaggcattttccattacattctttggagagtggggtg 577 Query: 502 acaagagccagattgctacgattggcttggctgctgatga 541 | ||||| || |||||||| ||||| |||||||||||||| Sbjct: 578 ataagagtcaaattgctactattggtttggctgctgatga 617
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 117 bits (59), Expect = 4e-23 Identities = 80/87 (91%) Strand = Plus / Minus Query: 224 gatatcacgtaaatggactcatcatatcacgactctgctgttctttgtgtttggcatctg 283 ||||||||| ||||||||||||||| | || |||||||| ||||||||||||||||| | Sbjct: 20994814 gatatcacgcaaatggactcatcatgtgaccactctgctattctttgtgtttggcatttt 20994755 Query: 284 gtcattgtgggaaggcttcaaagaaga 310 ||||||||||||||||||||||||||| Sbjct: 20994754 gtcattgtgggaaggcttcaaagaaga 20994728 Score = 91.7 bits (46), Expect = 2e-15 Identities = 64/70 (91%) Strand = Plus / Minus Query: 47 ggggctcaccaagtcgctggccatgatcgtgctctccgaggtcggggacaagaccttctt 106 |||| ||||||||||||||||||||| |||||||| ||| |||| |||||||||||||| Sbjct: 20996472 ggggttcaccaagtcgctggccatgacggtgctctcggagatcggcgacaagaccttctt 20996413 Query: 107 cgccgccgcg 116 |||||||||| Sbjct: 20996412 cgccgccgcg 20996403 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 116 gattctggccatgcgccatccccggaagctcgtcctggctggctgtctatcggcattaac 175 |||||||||||||||| ||||||||||||| || || ||||| ||||| | ||||||| Sbjct: 20995552 gattctggccatgcgctatccccggaagcttgttcttgctggttgtctcacctcattaac 20995493 Query: 176 agtga 180 ||||| Sbjct: 20995492 agtga 20995488 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Minus Query: 397 aggcaactgaggatacaaagaaaaagcaaaggccatttctcatgcagttcttctcaccaa 456 |||||| ||| |||| |||||| ||||||| |||||| | |||||||||||||||||| Sbjct: 20993918 aggcaaatgatgataaaaagaagcagcaaagaccatttgttttgcagttcttctcaccaa 20993859 Query: 457 tttttatcaagg 468 | ||||| |||| Sbjct: 20993858 tctttataaagg 20993847 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 466 aggcattttccatcactttctttggcgagtggggtgacaagag 508 ||||||||||||| || |||||||| ||||||||||| ||||| Sbjct: 20993732 aggcattttccattacattctttggagagtggggtgataagag 20993690 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Minus Query: 510 cagattgctacgattggcttggctgctgatga 541 ||||||||||| ||||| |||||||||||||| Sbjct: 20993615 cagattgctactattggtttggctgctgatga 20993584 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 22 ccgccatgtcgccgtctctgctcgggg 48 |||||||| |||||||||||||||||| Sbjct: 20996608 ccgccatggcgccgtctctgctcgggg 20996582 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 cgcctccccccgccgccgcc 26 |||||||||||||||||||| Sbjct: 24510571 cgcctccccccgccgccgcc 24510590
>dbj|AP004666.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0431A03 Length = 149500 Score = 117 bits (59), Expect = 4e-23 Identities = 80/87 (91%) Strand = Plus / Minus Query: 224 gatatcacgtaaatggactcatcatatcacgactctgctgttctttgtgtttggcatctg 283 ||||||||| ||||||||||||||| | || |||||||| ||||||||||||||||| | Sbjct: 60989 gatatcacgcaaatggactcatcatgtgaccactctgctattctttgtgtttggcatttt 60930 Query: 284 gtcattgtgggaaggcttcaaagaaga 310 ||||||||||||||||||||||||||| Sbjct: 60929 gtcattgtgggaaggcttcaaagaaga 60903 Score = 91.7 bits (46), Expect = 2e-15 Identities = 64/70 (91%) Strand = Plus / Minus Query: 47 ggggctcaccaagtcgctggccatgatcgtgctctccgaggtcggggacaagaccttctt 106 |||| ||||||||||||||||||||| |||||||| ||| |||| |||||||||||||| Sbjct: 62647 ggggttcaccaagtcgctggccatgacggtgctctcggagatcggcgacaagaccttctt 62588 Query: 107 cgccgccgcg 116 |||||||||| Sbjct: 62587 cgccgccgcg 62578 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 116 gattctggccatgcgccatccccggaagctcgtcctggctggctgtctatcggcattaac 175 |||||||||||||||| ||||||||||||| || || ||||| ||||| | ||||||| Sbjct: 61727 gattctggccatgcgctatccccggaagcttgttcttgctggttgtctcacctcattaac 61668 Query: 176 agtga 180 ||||| Sbjct: 61667 agtga 61663 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Minus Query: 397 aggcaactgaggatacaaagaaaaagcaaaggccatttctcatgcagttcttctcaccaa 456 |||||| ||| |||| |||||| ||||||| |||||| | |||||||||||||||||| Sbjct: 60093 aggcaaatgatgataaaaagaagcagcaaagaccatttgttttgcagttcttctcaccaa 60034 Query: 457 tttttatcaagg 468 | ||||| |||| Sbjct: 60033 tctttataaagg 60022 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 466 aggcattttccatcactttctttggcgagtggggtgacaagag 508 ||||||||||||| || |||||||| ||||||||||| ||||| Sbjct: 59907 aggcattttccattacattctttggagagtggggtgataagag 59865 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Minus Query: 510 cagattgctacgattggcttggctgctgatga 541 ||||||||||| ||||| |||||||||||||| Sbjct: 59790 cagattgctactattggtttggctgctgatga 59759 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 22 ccgccatgtcgccgtctctgctcgggg 48 |||||||| |||||||||||||||||| Sbjct: 62783 ccgccatggcgccgtctctgctcgggg 62757
>ref|NM_102363.1| Arabidopsis thaliana unknown protein AT1G25520 mRNA, complete cds Length = 1167 Score = 77.8 bits (39), Expect = 3e-11 Identities = 81/95 (85%) Strand = Plus / Plus Query: 447 ttctcaccaatttttatcaaggcattttccatcactttctttggcgagtggggtgacaag 506 ||||| ||||||||| ||||||| ||||| || | ||||||||| || |||||||||||| Sbjct: 605 ttctctccaatttttctcaaggctttttcgattaatttctttggagaatggggtgacaag 664 Query: 507 agccagattgctacgattggcttggctgctgatga 541 || ||| ||||||| ||||| || ||||| ||||| Sbjct: 665 agtcagcttgctacaattggtttagctgcagatga 699 Score = 65.9 bits (33), Expect = 1e-07 Identities = 134/167 (80%), Gaps = 3/167 (1%) Strand = Plus / Plus Query: 192 tctgcttctctcggctgggttgcacctaatctgatatcacgtaaatggactcatcatatc 251 |||||| |||| || |||| ||| ||||||||||| || || |||||||||||||| || Sbjct: 347 tctgctactcttggatgggctgctcctaatctgatctctcgcaaatggactcatcacata 406 Query: 252 acgactctgctgttctttgtgtttggcatctggtcattgtgggaaggcttcaaagaagaa 311 || || || ||||||||| ||||| | ||||| |||||||| || |||||||||| | Sbjct: 407 acaacattgttgttctttggttttgggctatggtctttgtgggacggtttcaaagaagga 466 Query: 312 ggagag---tcagaagacttggctgaattggaagcaaagctggatgc 355 |||| | || ||||| ||||||||| | |||||| | |||||||| Sbjct: 467 ggagggggttcggaagaattggctgaagtcgaagcagaactggatgc 513
>gb|BT004436.1| Arabidopsis thaliana clone U20278 putative transmembrane protein (At1g25520) mRNA, complete cds Length = 724 Score = 77.8 bits (39), Expect = 3e-11 Identities = 81/95 (85%) Strand = Plus / Plus Query: 447 ttctcaccaatttttatcaaggcattttccatcactttctttggcgagtggggtgacaag 506 ||||| ||||||||| ||||||| ||||| || | ||||||||| || |||||||||||| Sbjct: 421 ttctctccaatttttctcaaggctttttcgattaatttctttggagaatggggtgacaag 480 Query: 507 agccagattgctacgattggcttggctgctgatga 541 || ||| ||||||| ||||| || ||||| ||||| Sbjct: 481 agtcagcttgctacaattggtttagctgcagatga 515 Score = 65.9 bits (33), Expect = 1e-07 Identities = 134/167 (80%), Gaps = 3/167 (1%) Strand = Plus / Plus Query: 192 tctgcttctctcggctgggttgcacctaatctgatatcacgtaaatggactcatcatatc 251 |||||| |||| || |||| ||| ||||||||||| || || |||||||||||||| || Sbjct: 163 tctgctactcttggatgggctgctcctaatctgatctctcgcaaatggactcatcacata 222 Query: 252 acgactctgctgttctttgtgtttggcatctggtcattgtgggaaggcttcaaagaagaa 311 || || || ||||||||| ||||| | ||||| |||||||| || |||||||||| | Sbjct: 223 acaacattgttgttctttggttttgggctatggtctttgtgggacggtttcaaagaagga 282 Query: 312 ggagag---tcagaagacttggctgaattggaagcaaagctggatgc 355 |||| | || ||||| ||||||||| | |||||| | |||||||| Sbjct: 283 ggagggggttcggaagaattggctgaagtcgaagcagaactggatgc 329
>gb|AY088057.1| Arabidopsis thaliana clone 40780 mRNA, complete sequence Length = 1167 Score = 77.8 bits (39), Expect = 3e-11 Identities = 81/95 (85%) Strand = Plus / Plus Query: 447 ttctcaccaatttttatcaaggcattttccatcactttctttggcgagtggggtgacaag 506 ||||| ||||||||| ||||||| ||||| || | ||||||||| || |||||||||||| Sbjct: 605 ttctctccaatttttctcaaggctttttcgattaatttctttggagaatggggtgacaag 664 Query: 507 agccagattgctacgattggcttggctgctgatga 541 || ||| ||||||| ||||| || ||||| ||||| Sbjct: 665 agtcagcttgctacaattggtttagctgcagatga 699 Score = 65.9 bits (33), Expect = 1e-07 Identities = 134/167 (80%), Gaps = 3/167 (1%) Strand = Plus / Plus Query: 192 tctgcttctctcggctgggttgcacctaatctgatatcacgtaaatggactcatcatatc 251 |||||| |||| || |||| ||| ||||||||||| || || |||||||||||||| || Sbjct: 347 tctgctactcttggatgggctgctcctaatctgatctctcgcaaatggactcatcacata 406 Query: 252 acgactctgctgttctttgtgtttggcatctggtcattgtgggaaggcttcaaagaagaa 311 || || || ||||||||| ||||| | ||||| |||||||| || |||||||||| | Sbjct: 407 acaacattgttgttctttggttttgggctatggtctttgtgggacggtttcaaagaagga 466 Query: 312 ggagag---tcagaagacttggctgaattggaagcaaagctggatgc 355 |||| | || ||||| ||||||||| | |||||| | |||||||| Sbjct: 467 ggagggggttcggaagaattggctgaagtcgaagcagaactggatgc 513
>gb|BT002846.1| Arabidopsis thaliana clone RAFL15-01-N15 (R20278) putative transmembrane protein (At1g25520) mRNA, complete cds Length = 1086 Score = 77.8 bits (39), Expect = 3e-11 Identities = 81/95 (85%) Strand = Plus / Plus Query: 447 ttctcaccaatttttatcaaggcattttccatcactttctttggcgagtggggtgacaag 506 ||||| ||||||||| ||||||| ||||| || | ||||||||| || |||||||||||| Sbjct: 601 ttctctccaatttttctcaaggctttttcgattaatttctttggagaatggggtgacaag 660 Query: 507 agccagattgctacgattggcttggctgctgatga 541 || ||| ||||||| ||||| || ||||| ||||| Sbjct: 661 agtcagcttgctacaattggtttagctgcagatga 695 Score = 65.9 bits (33), Expect = 1e-07 Identities = 134/167 (80%), Gaps = 3/167 (1%) Strand = Plus / Plus Query: 192 tctgcttctctcggctgggttgcacctaatctgatatcacgtaaatggactcatcatatc 251 |||||| |||| || |||| ||| ||||||||||| || || |||||||||||||| || Sbjct: 343 tctgctactcttggatgggctgctcctaatctgatctctcgcaaatggactcatcacata 402 Query: 252 acgactctgctgttctttgtgtttggcatctggtcattgtgggaaggcttcaaagaagaa 311 || || || ||||||||| ||||| | ||||| |||||||| || |||||||||| | Sbjct: 403 acaacattgttgttctttggttttgggctatggtctttgtgggacggtttcaaagaagga 462 Query: 312 ggagag---tcagaagacttggctgaattggaagcaaagctggatgc 355 |||| | || ||||| ||||||||| | |||||| | |||||||| Sbjct: 463 ggagggggttcggaagaattggctgaagtcgaagcagaactggatgc 509
>ref|NM_105537.3| Arabidopsis thaliana unknown protein AT1G68650 mRNA, complete cds Length = 955 Score = 67.9 bits (34), Expect = 3e-08 Identities = 82/98 (83%) Strand = Plus / Plus Query: 444 ttcttctcaccaatttttatcaaggcattttccatcactttctttggcgagtggggtgac 503 |||||||| || |||||| ||||||| ||||| || | |||||||| || ||||||||| Sbjct: 489 ttcttctctcccatttttctcaaggcgttttcgattaacttctttggtgaatggggtgac 548 Query: 504 aagagccagattgctacgattggcttggctgctgatga 541 ||||| ||| |||| || ||||| |||||||| ||||| Sbjct: 549 aagagtcagcttgcgaccattggtttggctgcagatga 586 Score = 50.1 bits (25), Expect = 0.008 Identities = 130/165 (78%) Strand = Plus / Plus Query: 189 ttatctgcttctctcggctgggttgcacctaatctgatatcacgtaaatggactcatcat 248 ||||||||| | || || |||| ||| || |||||||| || || ||||||||||||||| Sbjct: 237 ttatctgctacacttggttgggctgctccaaatctgatctctcggaaatggactcatcat 296 Query: 249 atcacgactctgctgttctttgtgtttggcatctggtcattgtgggaaggcttcaaagaa 308 || || || | ||||||||| ||||| | ||||| |||||||| || || |||||| Sbjct: 297 ataacaacattcttgttctttggctttgggttatggtctttgtgggatggttttaaagaa 356 Query: 309 gaaggagagtcagaagacttggctgaattggaagcaaagctggat 353 | ||||| || ||||| ||||| ||| | |||||| | |||||| Sbjct: 357 ggaggaggttctgaagaattggcagaagttgaagcagaactggat 401
>gb|BT024926.1| Arabidopsis thaliana At1g68650 mRNA, complete cds Length = 687 Score = 67.9 bits (34), Expect = 3e-08 Identities = 82/98 (83%) Strand = Plus / Plus Query: 444 ttcttctcaccaatttttatcaaggcattttccatcactttctttggcgagtggggtgac 503 |||||||| || |||||| ||||||| ||||| || | |||||||| || ||||||||| Sbjct: 412 ttcttctctcccatttttctcaaggcgttttcgattaacttctttggtgaatggggtgac 471 Query: 504 aagagccagattgctacgattggcttggctgctgatga 541 ||||| ||| |||| || ||||| |||||||| ||||| Sbjct: 472 aagagtcagcttgcgaccattggtttggctgcagatga 509 Score = 50.1 bits (25), Expect = 0.008 Identities = 130/165 (78%) Strand = Plus / Plus Query: 189 ttatctgcttctctcggctgggttgcacctaatctgatatcacgtaaatggactcatcat 248 ||||||||| | || || |||| ||| || |||||||| || || ||||||||||||||| Sbjct: 160 ttatctgctacacttggttgggctgctccaaatctgatctctcggaaatggactcatcat 219 Query: 249 atcacgactctgctgttctttgtgtttggcatctggtcattgtgggaaggcttcaaagaa 308 || || || | ||||||||| ||||| | ||||| |||||||| || || |||||| Sbjct: 220 ataacaacattcttgttctttggctttgggttatggtctttgtgggatggttttaaagaa 279 Query: 309 gaaggagagtcagaagacttggctgaattggaagcaaagctggat 353 | ||||| || ||||| ||||| ||| | |||||| | |||||| Sbjct: 280 ggaggaggttctgaagaattggcagaagttgaagcagaactggat 324
>emb|BX817813.1|CNS0AAIH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL43ZA11 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 952 Score = 67.9 bits (34), Expect = 3e-08 Identities = 82/98 (83%) Strand = Plus / Plus Query: 444 ttcttctcaccaatttttatcaaggcattttccatcactttctttggcgagtggggtgac 503 |||||||| || |||||| ||||||| ||||| || | |||||||| || ||||||||| Sbjct: 489 ttcttctctcccatttttctcaaggcgttttcgattaacttctttggtgaatggggtgac 548 Query: 504 aagagccagattgctacgattggcttggctgctgatga 541 ||||| ||| |||| || ||||| |||||||| ||||| Sbjct: 549 aagagtcagcttgcgaccattggtttggctgcagatga 586 Score = 50.1 bits (25), Expect = 0.008 Identities = 130/165 (78%) Strand = Plus / Plus Query: 189 ttatctgcttctctcggctgggttgcacctaatctgatatcacgtaaatggactcatcat 248 ||||||||| | || || |||| ||| || |||||||| || || ||||||||||||||| Sbjct: 237 ttatctgctacacttggttgggctgctccaaatctgatctctcggaaatggactcatcat 296 Query: 249 atcacgactctgctgttctttgtgtttggcatctggtcattgtgggaaggcttcaaagaa 308 || || || | ||||||||| ||||| | ||||| |||||||| || || |||||| Sbjct: 297 ataacaacattcttgttctttggctttgggttatggtctttgtgggatggttttaaagaa 356 Query: 309 gaaggagagtcagaagacttggctgaattggaagcaaagctggat 353 | ||||| || ||||| ||||| ||| | |||||| | |||||| Sbjct: 357 ggaggaggttctgaagaattggcagaagttgaagcagaactggat 401
>dbj|AK118742.1| Arabidopsis thaliana At1g68650 mRNA for putative transmembrane protein, complete cds, clone: RAFL21-09-G03 Length = 940 Score = 67.9 bits (34), Expect = 3e-08 Identities = 82/98 (83%) Strand = Plus / Plus Query: 444 ttcttctcaccaatttttatcaaggcattttccatcactttctttggcgagtggggtgac 503 |||||||| || |||||| ||||||| ||||| || | |||||||| || ||||||||| Sbjct: 474 ttcttctctcccatttttctcaaggcgttttcgattaacttctttggtgaatggggtgac 533 Query: 504 aagagccagattgctacgattggcttggctgctgatga 541 ||||| ||| |||| || ||||| |||||||| ||||| Sbjct: 534 aagagtcagcttgcgaccattggtttggctgcagatga 571 Score = 50.1 bits (25), Expect = 0.008 Identities = 130/165 (78%) Strand = Plus / Plus Query: 189 ttatctgcttctctcggctgggttgcacctaatctgatatcacgtaaatggactcatcat 248 ||||||||| | || || |||| ||| || |||||||| || || ||||||||||||||| Sbjct: 222 ttatctgctacacttggttgggctgctccaaatctgatctctcggaaatggactcatcat 281 Query: 249 atcacgactctgctgttctttgtgtttggcatctggtcattgtgggaaggcttcaaagaa 308 || || || | ||||||||| ||||| | ||||| |||||||| || || |||||| Sbjct: 282 ataacaacattcttgttctttggctttgggttatggtctttgtgggatggttttaaagaa 341 Query: 309 gaaggagagtcagaagacttggctgaattggaagcaaagctggat 353 | ||||| || ||||| ||||| ||| | |||||| | |||||| Sbjct: 342 ggaggaggttctgaagaattggcagaagttgaagcagaactggat 386
>gb|AY630339.1| Oryctolagus cuniculus A2B adenosine receptor mRNA, complete cds Length = 1886 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 55 ccaagtcgctggccatgatcgtg 77 ||||||||||||||||||||||| Sbjct: 800 ccaagtcgctggccatgatcgtg 822
>emb|AL121952.18|HSDJ472M2 Human DNA sequence from clone RP3-472M2 on chromosome 6q25.1-26 Contains the 3' end of the gene for KIAA1116 and a ribosomal protein L17 (60S ribosomal protein L17) (RPL17)(rpL17) pseudogene, complete sequence Length = 107506 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 450 tcaccaatttttatcaaggcat 471 |||||||||||||||||||||| Sbjct: 35412 tcaccaatttttatcaaggcat 35391
>gb|AC079281.4|AC079281 Arabidopsis thaliana chromosome 1 BAC F2J7 genomic sequence, complete sequence Length = 102540 Score = 44.1 bits (22), Expect = 0.47 Identities = 67/82 (81%) Strand = Plus / Minus Query: 234 aaatggactcatcatatcacgactctgctgttctttgtgtttggcatctggtcattgtgg 293 |||||||||||||| || || || || ||||||||| ||||| | ||||| |||||| Sbjct: 38148 aaatggactcatcacataacaacattgttgttctttggttttgggctatggtctttgtgg 38089 Query: 294 gaaggcttcaaagaagaaggag 315 || || |||||||||| ||||| Sbjct: 38088 gacggtttcaaagaaggaggag 38067
>gb|AC009343.9| Drosophila melanogaster clone BACR08L17, complete sequence Length = 182492 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 372 aaaggggaatcaaaaaataaa 392 ||||||||||||||||||||| Sbjct: 127817 aaaggggaatcaaaaaataaa 127837
>ref|NM_114586.2| Arabidopsis thaliana 1-aminocyclopropane-1-carboxylate oxidase/ iron ion binding / isopenicillin-N synthase AT3G47190 mRNA, complete cds Length = 1152 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 406 aggatacaaagaaaaagcaaa 426 ||||||||||||||||||||| Sbjct: 1080 aggatacaaagaaaaagcaaa 1060
>gb|AF326781.1| Triticum monococcum actin (ACT-1) gene, partial cds; putative chromosome condensation factor (CCF), putative resistance protein (RGA-2), putative resistance protein (RGA2) and putative nodulin-like-like protein (NLL) gene, complete cds; and retrotransposons Josephine, Angela-2, Angela-4, Heidi, Greti, Angela-3, Fatima, Erika-1, Angela-6, Angela-5, Barbara, Isabelle, Erika-2, and Claudia Length = 211009 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 6 gcgcctccccccgccgccgcc 26 ||||||||||||||||||||| Sbjct: 128937 gcgcctccccccgccgccgcc 128917 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 6 gcgcctccccccgccgccgcc 26 ||||||||||||||||||||| Sbjct: 107837 gcgcctccccccgccgccgcc 107817
>gb|AC137680.10| Mus musculus chromosome 13, clone RP23-454P19, complete sequence Length = 197663 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 287 attgtgggaaggcttcaaaga 307 ||||||||||||||||||||| Sbjct: 31122 attgtgggaaggcttcaaaga 31102
>gb|AC148334.3| Mus musculus BAC clone RP23-213L20 from chromosome 13, complete sequence Length = 207106 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 287 attgtgggaaggcttcaaaga 307 ||||||||||||||||||||| Sbjct: 5090 attgtgggaaggcttcaaaga 5110
>gb|AC115299.4| Mus musculus BAC clone RP23-444O19 from 13, complete sequence Length = 201296 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 287 attgtgggaaggcttcaaaga 307 ||||||||||||||||||||| Sbjct: 116402 attgtgggaaggcttcaaaga 116382
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 50 gctcaccaagtcgctggccat 70 ||||||||||||||||||||| Sbjct: 3539161 gctcaccaagtcgctggccat 3539141
>emb|AL133292.3|ATF13I12 Arabidopsis thaliana DNA chromosome 3, BAC clone F13I12 Length = 140680 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 406 aggatacaaagaaaaagcaaa 426 ||||||||||||||||||||| Sbjct: 91879 aggatacaaagaaaaagcaaa 91899
>gb|AF192304.6| Homo sapiens chromosome 8 clone CTC-458A3 map 8q24.3, complete sequence Length = 177028 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 413 aaagaaaaagcaaaggccatt 433 ||||||||||||||||||||| Sbjct: 52592 aaagaaaaagcaaaggccatt 52572
>dbj|AK054342.1| Mus musculus 2 days pregnant adult female ovary cDNA, RIKEN full-length enriched library, clone:E330017K18 product:unclassifiable, full insert sequence Length = 3275 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 287 attgtgggaaggcttcaaaga 307 ||||||||||||||||||||| Sbjct: 3189 attgtgggaaggcttcaaaga 3209
>gb|AY772410.1| Zea mays myo-inositol kinase (lpa3) mRNA, complete cds Length = 1605 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 5 ggcgcctccccccgccgccgc 25 ||||||||||||||||||||| Sbjct: 48 ggcgcctccccccgccgccgc 68
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 14 ccccgccgccgccatgtcgcc 34 ||||||||||||||||||||| Sbjct: 5642082 ccccgccgccgccatgtcgcc 5642102
>emb|BX826009.1|CNS0A66X Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL79ZD02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1152 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 406 aggatacaaagaaaaagcaaa 426 ||||||||||||||||||||| Sbjct: 1080 aggatacaaagaaaaagcaaa 1060
>emb|BX248582.3| Zebrafish DNA sequence from clone CH211-210B2 in linkage group 15, complete sequence Length = 75014 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 257 tctgctgttctttgtgtttgg 277 ||||||||||||||||||||| Sbjct: 45260 tctgctgttctttgtgtttgg 45280
>dbj|AP004687.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0021C04 Length = 162115 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 14 ccccgccgccgccatgtcgcc 34 ||||||||||||||||||||| Sbjct: 34229 ccccgccgccgccatgtcgcc 34249
>gb|AF123535.1| Zea mays alcohol dehydrogenase 1 (adh1) gene, adh1-F allele, complete cds Length = 160480 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 5 ggcgcctccccccgccgccgc 25 ||||||||||||||||||||| Sbjct: 102113 ggcgcctccccccgccgccgc 102133
>gb|AE003828.4| Drosophila melanogaster chromosome 2R, section 22 of 73 of the complete sequence Length = 257907 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 372 aaaggggaatcaaaaaataaa 392 ||||||||||||||||||||| Sbjct: 119731 aaaggggaatcaaaaaataaa 119751
>gb|AY691949.1| Zea mays alcohol dehydrogenase 1 (adh1A) gene, complete cds; Fourf copia_LTR and Huck gypsy_LTR retrotransposons, complete sequence; Opie2 copia_LTR retrotransposon Zeon gypsy_LTR and Opie1 copia_LTR retrotransposons, complete sequence; Ji copia_LTR retrotransposon, complete sequence; and unknown protein (adh1B), cyclin H-1 (adh1C), unknown protein (adh1D), hypothetical protein (adh1E), and unknown protein (adh1F) genes, complete cds Length = 126039 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 5 ggcgcctccccccgccgccgc 25 ||||||||||||||||||||| Sbjct: 85098 ggcgcctccccccgccgccgc 85118
>gb|AC124750.5| Mus musculus BAC clone RP23-273A20 from 8, complete sequence Length = 215042 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 cctccccccgccgccgccatg 29 ||||||||||||||||||||| Sbjct: 123738 cctccccccgccgccgccatg 123758
>ref|NM_188299.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1806 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 tcggcgcctccccccgccgccgcc 26 |||| ||||||||||||||||||| Sbjct: 1745 tcggagcctccccccgccgccgcc 1722
>ref|XM_483151.1| Oryza sativa (japonica cultivar-group), mRNA Length = 962 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 cgcctccccccgccgccgcc 26 |||||||||||||||||||| Sbjct: 216 cgcctccccccgccgccgcc 235
>ref|NM_191696.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1362 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 ctgctgttctttgtgtttgg 277 |||||||||||||||||||| Sbjct: 1007 ctgctgttctttgtgtttgg 1026
>gb|AF411059.1| Homo sapiens clone BAC_22608 inducible T-cell co-stimulator (ICOS) gene, complete cds; and endogenous virus HERV-H, complete sequence Length = 147538 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 tctgctgttctttgtgtttg 276 |||||||||||||||||||| Sbjct: 111227 tctgctgttctttgtgtttg 111246
>gb|AF525764.1| Aegilops tauschii subsp. strangulata SBE I pseudogene, partial sequence; SBE I pseudogene, complete sequence; and starch branching enzyme I (SBE I) gene, complete cds Length = 25187 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 ttcaaagaagaaggagagtc 319 |||||||||||||||||||| Sbjct: 18747 ttcaaagaagaaggagagtc 18766
>gb|AC097447.4| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0042K08, complete sequence Length = 117839 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 cccgccgccgccatgtcgcc 34 |||||||||||||||||||| Sbjct: 50951 cccgccgccgccatgtcgcc 50932
>gb|U39855.1| Caenorhabditis elegans cosmid F18G5, complete sequence Length = 31776 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 380 atcaaaaaataaatcaaaggcaac 403 ||||||||| |||||||||||||| Sbjct: 5162 atcaaaaaaaaaatcaaaggcaac 5185
>gb|AC005528.43| Mus musculus strain 129S6/SvEvTac clone rp21-493n6 map 11a2, complete sequence Length = 199326 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 494 gtggggtgacaagagccaga 513 |||||||||||||||||||| Sbjct: 42812 gtggggtgacaagagccaga 42793
>gb|AC073873.7| Homo sapiens BAC clone RP11-575M4 from 7, complete sequence Length = 188992 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 gaatcaaaaaataaatcaaa 397 |||||||||||||||||||| Sbjct: 93656 gaatcaaaaaataaatcaaa 93675
>emb|AL591783.1|SME591783 Sinorhizobium meliloti 1021 complete chromosome; segment 2/12 Length = 306650 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 ccgccgccgccatgtcgccg 35 |||||||||||||||||||| Sbjct: 223869 ccgccgccgccatgtcgccg 223850
>gb|AC126030.3| Mus musculus BAC clone RP23-452N11 from chromosome 16, complete sequence Length = 187505 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 aagacttggctgaattggaa 341 |||||||||||||||||||| Sbjct: 106330 aagacttggctgaattggaa 106349
>gb|AC122304.4| Mus musculus BAC clone RP23-283G11 from 18, complete sequence Length = 184090 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 403 ctgaggatacaaagaaaaag 422 |||||||||||||||||||| Sbjct: 125553 ctgaggatacaaagaaaaag 125534
>gb|AC144343.8| Medicago truncatula clone mth2-12c21, complete sequence Length = 130740 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 401 aactgaggatacaaagaaaaagca 424 ||||||| |||||||||||||||| Sbjct: 66883 aactgagcatacaaagaaaaagca 66906
>emb|BX927062.11| Zebrafish DNA sequence from clone CH211-227N20 in linkage group 13, complete sequence Length = 154186 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 404 tgaggatacaaagaaaaagcaaag 427 |||||||| ||||||||||||||| Sbjct: 32987 tgaggatagaaagaaaaagcaaag 32964
>emb|AL390918.7| Human DNA sequence from clone RP11-569E4 on chromosome 13 Contains part of a novel gene (KIAA0865), possible ortholog of rat myosin heavy chain Myr 8 (Loc192253), complete sequence Length = 83550 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 ctctgctgttctttgtgttt 275 |||||||||||||||||||| Sbjct: 49258 ctctgctgttctttgtgttt 49239
>emb|AL645845.14| Mouse DNA sequence from clone RP23-338J18 on chromosome 11 Contains the Ewsh gene for Ewing sarcoma homolog, a novel gene, gene Emu1 and two CpG islands, complete sequence Length = 109446 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 494 gtggggtgacaagagccaga 513 |||||||||||||||||||| Sbjct: 82102 gtggggtgacaagagccaga 82121
>emb|AL606625.3|OSJN00039 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0032I19, complete sequence Length = 145383 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 ccgccgccgccatgtcgccgtctc 39 ||||||||| |||||||||||||| Sbjct: 31178 ccgccgccgtcatgtcgccgtctc 31201
>gb|AC147271.3| Pan troglodytes BAC clone RP43-121F15 from chromosome 7, complete sequence Length = 180569 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 gaatcaaaaaataaatcaaa 397 |||||||||||||||||||| Sbjct: 179897 gaatcaaaaaataaatcaaa 179916
>ref|NM_032626.5| Homo sapiens retinoblastoma binding protein 6 (RBBP6), transcript variant 3, mRNA Length = 1780 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 cgcctccccccgccgccgcc 26 |||||||||||||||||||| Sbjct: 356 cgcctccccccgccgccgcc 337
>ref|NM_006910.4| Homo sapiens retinoblastoma binding protein 6 (RBBP6), transcript variant 1, mRNA Length = 6853 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 cgcctccccccgccgccgcc 26 |||||||||||||||||||| Sbjct: 356 cgcctccccccgccgccgcc 337
>ref|NM_018703.3| Homo sapiens retinoblastoma binding protein 6 (RBBP6), transcript variant 2, mRNA Length = 6751 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 cgcctccccccgccgccgcc 26 |||||||||||||||||||| Sbjct: 356 cgcctccccccgccgccgcc 337
>gb|AC021036.6| Homo sapiens chromosome 10 clone RP11-420K10, complete sequence Length = 169305 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 ctgttctttgtgtttggcat 280 |||||||||||||||||||| Sbjct: 100403 ctgttctttgtgtttggcat 100422
>dbj|AP007166.1| Aspergillus oryzae RIB40 genomic DNA, SC113 Length = 1841713 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 caagaccttcttcgccgccg 114 |||||||||||||||||||| Sbjct: 129910 caagaccttcttcgccgccg 129891
>dbj|AP007157.1| Aspergillus oryzae RIB40 genomic DNA, SC023 Length = 2661830 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 caagtcgctggccatgatcg 75 |||||||||||||||||||| Sbjct: 1047201 caagtcgctggccatgatcg 1047182
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 106 tcgccgccgcgattctggcc 125 |||||||||||||||||||| Sbjct: 4324646 tcgccgccgcgattctggcc 4324627
>gb|AC096759.3| Homo sapiens BAC clone RP11-567N4 from 4, complete sequence Length = 196363 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 257 tctgctgttctttgtgtttggcat 280 |||||||||||||||| ||||||| Sbjct: 67609 tctgctgttctttgtgcttggcat 67632
>gb|AC010321.8| Homo sapiens chromosome 16 clone CTD-2540M10, complete sequence Length = 207256 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 cgcctccccccgccgccgcc 26 |||||||||||||||||||| Sbjct: 120767 cgcctccccccgccgccgcc 120786
>gb|AC156641.2| Mus musculus BAC clone RP23-204J8 from chromosome 9, complete sequence Length = 219981 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 521 gattggcttggctgctgatg 540 |||||||||||||||||||| Sbjct: 86241 gattggcttggctgctgatg 86222
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 ccgccgccgccatgtcgccg 35 |||||||||||||||||||| Sbjct: 1054596 ccgccgccgccatgtcgccg 1054577
>gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chromosome I, complete sequence Length = 4332241 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 469 cattttccatcactttcttt 488 |||||||||||||||||||| Sbjct: 431492 cattttccatcactttcttt 431473
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 ccgccgccgccatgtcgccgtctc 39 ||||||||| |||||||||||||| Sbjct: 15946965 ccgccgccgtcatgtcgccgtctc 15946988
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 cccgccgccgccatgtcgcc 34 |||||||||||||||||||| Sbjct: 3936183 cccgccgccgccatgtcgcc 3936164
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 3 tcggcgcctccccccgccgccgcc 26 |||| ||||||||||||||||||| Sbjct: 5548969 tcggagcctccccccgccgccgcc 5548992
>gb|AC009965.9| Homo sapiens BAC clone RP11-388A17 from 2, complete sequence Length = 181700 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 tctgctgttctttgtgtttg 276 |||||||||||||||||||| Sbjct: 133194 tctgctgttctttgtgtttg 133175
>gb|AF312875.1|AF312875 Sinorhizobium meliloti methyl-accepting chemotaxis protein McpT (mcpT) gene, complete cds Length = 1959 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 ccgccgccgccatgtcgccg 35 |||||||||||||||||||| Sbjct: 703 ccgccgccgccatgtcgccg 684
>gb|AC139109.1| Homo sapiens chromosome 5 clone RP11-887F16, complete sequence Length = 167832 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 400 caactgaggatacaaagaaaaagc 423 |||||||||||||| ||||||||| Sbjct: 121180 caactgaggatacagagaaaaagc 121157
>gb|AC136612.2| Homo sapiens chromosome 16 clone RP11-319D11, complete sequence Length = 221622 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 400 caactgaggatacaaagaaaaagc 423 |||||||||||||| ||||||||| Sbjct: 94900 caactgaggatacagagaaaaagc 94923
>gb|AC133939.4| Mus musculus BAC clone RP23-402F1 from chromosome 5, complete sequence Length = 193121 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 447 ttctcaccaatttttatcaa 466 |||||||||||||||||||| Sbjct: 161863 ttctcaccaatttttatcaa 161882
>dbj|AP003197.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1015E06 Length = 164583 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 3 tcggcgcctccccccgccgccgcc 26 |||| ||||||||||||||||||| Sbjct: 145809 tcggagcctccccccgccgccgcc 145832
>dbj|AP003105.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0489A05 Length = 158815 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 3 tcggcgcctccccccgccgccgcc 26 |||| ||||||||||||||||||| Sbjct: 14442 tcggagcctccccccgccgccgcc 14465
>emb|BX005065.10| Zebrafish DNA sequence from clone CH211-163B2 in linkage group 8, complete sequence Length = 175016 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 380 atcaaaaaataaatcaaaggcaactgag 407 |||||||||||||| |||||||| |||| Sbjct: 2346 atcaaaaaataaataaaaggcaaatgag 2373
>dbj|AP000364.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0026F07 Length = 137354 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 cgcctccccccgccgccgcc 26 |||||||||||||||||||| Sbjct: 18831 cgcctccccccgccgccgcc 18850
>emb|AJ535718.1|HSA535718 Homo sapiens partial ICOS gene for inducible costimulator protein Length = 186585 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 tctgctgttctttgtgtttg 276 |||||||||||||||||||| Sbjct: 69705 tctgctgttctttgtgtttg 69724
>gb|AC112944.7| Mus musculus chromosome 5, clone RP23-411F8, complete sequence Length = 209174 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 447 ttctcaccaatttttatcaa 466 |||||||||||||||||||| Sbjct: 109676 ttctcaccaatttttatcaa 109657
>dbj|AP005148.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1142B04 Length = 161964 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 cgcctccccccgccgccgcc 26 |||||||||||||||||||| Sbjct: 126287 cgcctccccccgccgccgcc 126306
>dbj|AK108510.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-144-A03, full insert sequence Length = 962 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 cgcctccccccgccgccgcc 26 |||||||||||||||||||| Sbjct: 216 cgcctccccccgccgccgcc 235
>dbj|AK073568.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033042J01, full insert sequence Length = 1185 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 tcggcgcctccccccgccgccgcc 26 |||| ||||||||||||||||||| Sbjct: 867 tcggagcctccccccgccgccgcc 844
>gb|AC155928.2| Mus musculus BAC clone RP24-70N20 from 9, complete sequence Length = 239304 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 409 atacaaagaaaaagcaaagg 428 |||||||||||||||||||| Sbjct: 113665 atacaaagaaaaagcaaagg 113646
>emb|X13998.1|CLPJ3 Hamster DNA/transfected plasmid junction Length = 485 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 tgtgggaaggcttcaaagaa 308 |||||||||||||||||||| Sbjct: 109 tgtgggaaggcttcaaagaa 128
>gb|AC027354.3| Homo sapiens chromosome 16 clone RP11-179H7, complete sequence Length = 182046 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 400 caactgaggatacaaagaaaaagc 423 |||||||||||||| ||||||||| Sbjct: 121179 caactgaggatacagagaaaaagc 121156
>gb|AE016823.1| Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130, chromosome I, complete sequence Length = 4277185 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 469 cattttccatcactttcttt 488 |||||||||||||||||||| Sbjct: 429279 cattttccatcactttcttt 429260
>emb|BX284693.6| Zebrafish DNA sequence from clone DKEY-179M13 in linkage group 2, complete sequence Length = 84370 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 469 cattttccatcactttcttt 488 |||||||||||||||||||| Sbjct: 66985 cattttccatcactttcttt 67004
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 cccgccgccgccatgtcgcc 34 |||||||||||||||||||| Sbjct: 3936104 cccgccgccgccatgtcgcc 3936085
>gb|AC147562.5| Mus musculus BAC clone RP23-239A13 from 3, complete sequence Length = 167633 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 310 aaggagagtcagaagacttg 329 |||||||||||||||||||| Sbjct: 46667 aaggagagtcagaagacttg 46686
>gb|AC144631.3| Mus musculus BAC clone RP23-112C14 from 3, complete sequence Length = 179548 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 tctttgtgtttggcatctgg 284 |||||||||||||||||||| Sbjct: 37005 tctttgtgtttggcatctgg 37024
>emb|AL109769.5|CNS018OY Human chromosome 14 DNA sequence BAC R-501E21 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 161938 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 cgcctccccccgccgccgcc 26 |||||||||||||||||||| Sbjct: 63029 cgcctccccccgccgccgcc 63010 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,507,567 Number of Sequences: 3902068 Number of extensions: 6507567 Number of successful extensions: 154022 Number of sequences better than 10.0: 91 Number of HSP's better than 10.0 without gapping: 91 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 153036 Number of HSP's gapped (non-prelim): 986 length of query: 546 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 523 effective length of database: 17,143,297,704 effective search space: 8965944699192 effective search space used: 8965944699192 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)