| Clone Name | bags11k24 |
|---|---|
| Clone Library Name | barley_pub |
>THN7_HORVU (Q42838) Thionin BTH7 precursor [Contains: Thionin BTH7; Acidic| protein] Length = 137 Score = 52.0 bits (123), Expect = 5e-07 Identities = 21/22 (95%), Positives = 21/22 (95%) Frame = +3 Query: 3 RNCYXACRFAGGSRPVCATACG 68 RNCY ACRFAGGSRPVCATACG Sbjct: 38 RNCYNACRFAGGSRPVCATACG 59
>THN5_HORVU (P09617) Leaf-specific thionin precursor [Contains: Leaf-specific| thionin; Acidic protein] Length = 137 Score = 52.0 bits (123), Expect = 5e-07 Identities = 21/22 (95%), Positives = 21/22 (95%) Frame = +3 Query: 3 RNCYXACRFAGGSRPVCATACG 68 RNCY ACRFAGGSRPVCATACG Sbjct: 38 RNCYNACRFAGGSRPVCATACG 59
>THNX_HORVU (Q8H0Q5) Probable leaf thionin precursor [Contains: Probable leaf| thionin; Acidic protein] Length = 137 Score = 50.1 bits (118), Expect = 2e-06 Identities = 20/22 (90%), Positives = 20/22 (90%) Frame = +3 Query: 3 RNCYXACRFAGGSRPVCATACG 68 RNCY AC FAGGSRPVCATACG Sbjct: 38 RNCYNACHFAGGSRPVCATACG 59
>THN6_HORVU (P09618) Leaf-specific thionin BTH6 precursor [Contains:| Leaf-specific thionin BTH6; Acidic protein] Length = 137 Score = 45.4 bits (106), Expect = 5e-05 Identities = 18/21 (85%), Positives = 18/21 (85%) Frame = +3 Query: 3 RNCYXACRFAGGSRPVCATAC 65 RNCY CRFAGGSRPVCA AC Sbjct: 38 RNCYNTCRFAGGSRPVCAGAC 58
>THN3_HORVU (P08772) Leaf-specific thionin DB4 precursor [Contains:| Leaf-specific thionin DB4; Acidic protein] Length = 137 Score = 43.5 bits (101), Expect = 2e-04 Identities = 17/21 (80%), Positives = 17/21 (80%) Frame = +3 Query: 3 RNCYXACRFAGGSRPVCATAC 65 RNCY C FAGGSRPVCA AC Sbjct: 38 RNCYNTCHFAGGSRPVCAGAC 58
>THND_HELPU (P60057) Hellethionin D| Length = 46 Score = 39.3 bits (90), Expect = 0.003 Identities = 14/21 (66%), Positives = 15/21 (71%) Frame = +3 Query: 3 RNCYXACRFAGGSRPVCATAC 65 RNCY ACRF GGS+P C C Sbjct: 10 RNCYNACRFTGGSQPTCGILC 30
>THN_PHOTO (P01539) Phoratoxin| Length = 46 Score = 37.0 bits (84), Expect = 0.016 Identities = 15/22 (68%), Positives = 15/22 (68%) Frame = +3 Query: 3 RNCYXACRFAGGSRPVCATACG 68 RN Y CRF GGSRPVCA G Sbjct: 10 RNIYNTCRFGGGSRPVCAKLSG 31
>THN2_VISAL (P32880) Viscotoxin A2| Length = 46 Score = 34.7 bits (78), Expect = 0.079 Identities = 14/22 (63%), Positives = 15/22 (68%) Frame = +3 Query: 3 RNCYXACRFAGGSRPVCATACG 68 RN Y CRF GGSR VCA+ G Sbjct: 10 RNIYNTCRFGGGSREVCASLSG 31
>THNC_VISAL (P83554) Viscotoxin C1| Length = 46 Score = 32.7 bits (73), Expect = 0.30 Identities = 14/22 (63%), Positives = 14/22 (63%) Frame = +3 Query: 3 RNCYXACRFAGGSRPVCATACG 68 RN Y CRFAGGSR CA G Sbjct: 10 RNIYNTCRFAGGSRERCAKLSG 31
>THN1_VISAL (P01537) Viscotoxin 1-PS| Length = 46 Score = 32.7 bits (73), Expect = 0.30 Identities = 13/22 (59%), Positives = 14/22 (63%) Frame = +3 Query: 3 RNCYXACRFAGGSRPVCATACG 68 R+ Y CRF GGSR VCA G Sbjct: 10 RBIYBTCRFGGGSRZVCARISG 31
>THNA_PHOLI (P01540) Ligatoxin A| Length = 46 Score = 30.8 bits (68), Expect = 1.1 Identities = 12/22 (54%), Positives = 13/22 (59%) Frame = +3 Query: 3 RNCYXACRFAGGSRPVCATACG 68 RN Y CR G SRP CA+ G Sbjct: 10 RNIYNTCRLTGTSRPTCASLSG 31
>THN3_VISAL (P01538) Viscotoxin A3 precursor [Contains: Viscotoxin A3; Acidic| protein] Length = 111 Score = 30.4 bits (67), Expect = 1.5 Identities = 12/22 (54%), Positives = 12/22 (54%) Frame = +3 Query: 3 RNCYXACRFAGGSRPVCATACG 68 RN Y ACR G RP CA G Sbjct: 36 RNIYNACRLTGAPRPTCAKLSG 57
>THNB_PHOLI (P59358) Ligatoxin B| Length = 46 Score = 30.0 bits (66), Expect = 2.0 Identities = 12/22 (54%), Positives = 13/22 (59%) Frame = +3 Query: 3 RNCYXACRFAGGSRPVCATACG 68 RN Y CR G SR VCA+ G Sbjct: 10 RNIYNTCRLTGASRSVCASLSG 31
>THNB_VISAL (P08943) Viscotoxin B precursor [Contains: Viscotoxin B; Acidic| protein] (Fragment) Length = 103 Score = 29.6 bits (65), Expect = 2.6 Identities = 12/22 (54%), Positives = 13/22 (59%) Frame = +3 Query: 3 RNCYXACRFAGGSRPVCATACG 68 RN Y CR GGSR CA+ G Sbjct: 16 RNIYNTCRLGGGSRERCASLSG 37
>THN_DENCL (P01541) Denclatoxin B| Length = 46 Score = 28.5 bits (62), Expect = 5.7 Identities = 12/22 (54%), Positives = 12/22 (54%) Frame = +3 Query: 3 RNCYXACRFAGGSRPVCATACG 68 RN Y CR G RPVCA G Sbjct: 10 RNQYNICRLPGTPRPVCAALSG 31
>THN_PYRPU (P07504) Thionin| Length = 47 Score = 28.5 bits (62), Expect = 5.7 Identities = 12/22 (54%), Positives = 13/22 (59%), Gaps = 1/22 (4%) Frame = +3 Query: 3 RNCYXACRFAGG-SRPVCATAC 65 RNCY CR G SR +CA C Sbjct: 10 RNCYNVCRLPGTISREICAKKC 31
>THNB_HORVU (P21742) Beta-hordothionin precursor [Contains:| Beta-hordothionin; Acidic protein] Length = 136 Score = 27.7 bits (60), Expect = 9.7 Identities = 11/21 (52%), Positives = 13/21 (61%) Frame = +3 Query: 3 RNCYXACRFAGGSRPVCATAC 65 RNCY CR G + +CA AC Sbjct: 37 RNCYNLCRVRGAQK-LCANAC 56 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.306 0.119 0.311 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 9,676,660 Number of Sequences: 219361 Number of extensions: 54638 Number of successful extensions: 149 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 147 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 149 length of database: 80,573,946 effective HSP length: 0 effective length of database: 80,573,946 effective search space used: 1933774704 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.6 bits)