ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags11k24
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1THN7_HORVU (Q42838) Thionin BTH7 precursor [Contains: Thionin BT... 52 5e-07
2THN5_HORVU (P09617) Leaf-specific thionin precursor [Contains: L... 52 5e-07
3THNX_HORVU (Q8H0Q5) Probable leaf thionin precursor [Contains: P... 50 2e-06
4THN6_HORVU (P09618) Leaf-specific thionin BTH6 precursor [Contai... 45 5e-05
5THN3_HORVU (P08772) Leaf-specific thionin DB4 precursor [Contain... 44 2e-04
6THND_HELPU (P60057) Hellethionin D 39 0.003
7THN_PHOTO (P01539) Phoratoxin 37 0.016
8THN2_VISAL (P32880) Viscotoxin A2 35 0.079
9THNC_VISAL (P83554) Viscotoxin C1 33 0.30
10THN1_VISAL (P01537) Viscotoxin 1-PS 33 0.30
11THNA_PHOLI (P01540) Ligatoxin A 31 1.1
12THN3_VISAL (P01538) Viscotoxin A3 precursor [Contains: Viscotoxi... 30 1.5
13THNB_PHOLI (P59358) Ligatoxin B 30 2.0
14THNB_VISAL (P08943) Viscotoxin B precursor [Contains: Viscotoxin... 30 2.6
15THN_DENCL (P01541) Denclatoxin B 28 5.7
16THN_PYRPU (P07504) Thionin 28 5.7
17THNB_HORVU (P21742) Beta-hordothionin precursor [Contains: Beta-... 28 9.7

>THN7_HORVU (Q42838) Thionin BTH7 precursor [Contains: Thionin BTH7; Acidic|
           protein]
          Length = 137

 Score = 52.0 bits (123), Expect = 5e-07
 Identities = 21/22 (95%), Positives = 21/22 (95%)
 Frame = +3

Query: 3   RNCYXACRFAGGSRPVCATACG 68
           RNCY ACRFAGGSRPVCATACG
Sbjct: 38  RNCYNACRFAGGSRPVCATACG 59



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>THN5_HORVU (P09617) Leaf-specific thionin precursor [Contains: Leaf-specific|
           thionin; Acidic protein]
          Length = 137

 Score = 52.0 bits (123), Expect = 5e-07
 Identities = 21/22 (95%), Positives = 21/22 (95%)
 Frame = +3

Query: 3   RNCYXACRFAGGSRPVCATACG 68
           RNCY ACRFAGGSRPVCATACG
Sbjct: 38  RNCYNACRFAGGSRPVCATACG 59



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>THNX_HORVU (Q8H0Q5) Probable leaf thionin precursor [Contains: Probable leaf|
           thionin; Acidic protein]
          Length = 137

 Score = 50.1 bits (118), Expect = 2e-06
 Identities = 20/22 (90%), Positives = 20/22 (90%)
 Frame = +3

Query: 3   RNCYXACRFAGGSRPVCATACG 68
           RNCY AC FAGGSRPVCATACG
Sbjct: 38  RNCYNACHFAGGSRPVCATACG 59



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>THN6_HORVU (P09618) Leaf-specific thionin BTH6 precursor [Contains:|
           Leaf-specific thionin BTH6; Acidic protein]
          Length = 137

 Score = 45.4 bits (106), Expect = 5e-05
 Identities = 18/21 (85%), Positives = 18/21 (85%)
 Frame = +3

Query: 3   RNCYXACRFAGGSRPVCATAC 65
           RNCY  CRFAGGSRPVCA AC
Sbjct: 38  RNCYNTCRFAGGSRPVCAGAC 58



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>THN3_HORVU (P08772) Leaf-specific thionin DB4 precursor [Contains:|
           Leaf-specific thionin DB4; Acidic protein]
          Length = 137

 Score = 43.5 bits (101), Expect = 2e-04
 Identities = 17/21 (80%), Positives = 17/21 (80%)
 Frame = +3

Query: 3   RNCYXACRFAGGSRPVCATAC 65
           RNCY  C FAGGSRPVCA AC
Sbjct: 38  RNCYNTCHFAGGSRPVCAGAC 58



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>THND_HELPU (P60057) Hellethionin D|
          Length = 46

 Score = 39.3 bits (90), Expect = 0.003
 Identities = 14/21 (66%), Positives = 15/21 (71%)
 Frame = +3

Query: 3  RNCYXACRFAGGSRPVCATAC 65
          RNCY ACRF GGS+P C   C
Sbjct: 10 RNCYNACRFTGGSQPTCGILC 30



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>THN_PHOTO (P01539) Phoratoxin|
          Length = 46

 Score = 37.0 bits (84), Expect = 0.016
 Identities = 15/22 (68%), Positives = 15/22 (68%)
 Frame = +3

Query: 3  RNCYXACRFAGGSRPVCATACG 68
          RN Y  CRF GGSRPVCA   G
Sbjct: 10 RNIYNTCRFGGGSRPVCAKLSG 31



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>THN2_VISAL (P32880) Viscotoxin A2|
          Length = 46

 Score = 34.7 bits (78), Expect = 0.079
 Identities = 14/22 (63%), Positives = 15/22 (68%)
 Frame = +3

Query: 3  RNCYXACRFAGGSRPVCATACG 68
          RN Y  CRF GGSR VCA+  G
Sbjct: 10 RNIYNTCRFGGGSREVCASLSG 31



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>THNC_VISAL (P83554) Viscotoxin C1|
          Length = 46

 Score = 32.7 bits (73), Expect = 0.30
 Identities = 14/22 (63%), Positives = 14/22 (63%)
 Frame = +3

Query: 3  RNCYXACRFAGGSRPVCATACG 68
          RN Y  CRFAGGSR  CA   G
Sbjct: 10 RNIYNTCRFAGGSRERCAKLSG 31



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>THN1_VISAL (P01537) Viscotoxin 1-PS|
          Length = 46

 Score = 32.7 bits (73), Expect = 0.30
 Identities = 13/22 (59%), Positives = 14/22 (63%)
 Frame = +3

Query: 3  RNCYXACRFAGGSRPVCATACG 68
          R+ Y  CRF GGSR VCA   G
Sbjct: 10 RBIYBTCRFGGGSRZVCARISG 31



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>THNA_PHOLI (P01540) Ligatoxin A|
          Length = 46

 Score = 30.8 bits (68), Expect = 1.1
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = +3

Query: 3  RNCYXACRFAGGSRPVCATACG 68
          RN Y  CR  G SRP CA+  G
Sbjct: 10 RNIYNTCRLTGTSRPTCASLSG 31



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>THN3_VISAL (P01538) Viscotoxin A3 precursor [Contains: Viscotoxin A3; Acidic|
           protein]
          Length = 111

 Score = 30.4 bits (67), Expect = 1.5
 Identities = 12/22 (54%), Positives = 12/22 (54%)
 Frame = +3

Query: 3   RNCYXACRFAGGSRPVCATACG 68
           RN Y ACR  G  RP CA   G
Sbjct: 36  RNIYNACRLTGAPRPTCAKLSG 57



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>THNB_PHOLI (P59358) Ligatoxin B|
          Length = 46

 Score = 30.0 bits (66), Expect = 2.0
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = +3

Query: 3  RNCYXACRFAGGSRPVCATACG 68
          RN Y  CR  G SR VCA+  G
Sbjct: 10 RNIYNTCRLTGASRSVCASLSG 31



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>THNB_VISAL (P08943) Viscotoxin B precursor [Contains: Viscotoxin B; Acidic|
          protein] (Fragment)
          Length = 103

 Score = 29.6 bits (65), Expect = 2.6
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = +3

Query: 3  RNCYXACRFAGGSRPVCATACG 68
          RN Y  CR  GGSR  CA+  G
Sbjct: 16 RNIYNTCRLGGGSRERCASLSG 37



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>THN_DENCL (P01541) Denclatoxin B|
          Length = 46

 Score = 28.5 bits (62), Expect = 5.7
 Identities = 12/22 (54%), Positives = 12/22 (54%)
 Frame = +3

Query: 3  RNCYXACRFAGGSRPVCATACG 68
          RN Y  CR  G  RPVCA   G
Sbjct: 10 RNQYNICRLPGTPRPVCAALSG 31



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>THN_PYRPU (P07504) Thionin|
          Length = 47

 Score = 28.5 bits (62), Expect = 5.7
 Identities = 12/22 (54%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
 Frame = +3

Query: 3  RNCYXACRFAGG-SRPVCATAC 65
          RNCY  CR  G  SR +CA  C
Sbjct: 10 RNCYNVCRLPGTISREICAKKC 31



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>THNB_HORVU (P21742) Beta-hordothionin precursor [Contains:|
          Beta-hordothionin; Acidic protein]
          Length = 136

 Score = 27.7 bits (60), Expect = 9.7
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +3

Query: 3  RNCYXACRFAGGSRPVCATAC 65
          RNCY  CR  G  + +CA AC
Sbjct: 37 RNCYNLCRVRGAQK-LCANAC 56


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.306    0.119    0.311 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,676,660
Number of Sequences: 219361
Number of extensions: 54638
Number of successful extensions: 149
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 147
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 149
length of database: 80,573,946
effective HSP length: 0
effective length of database: 80,573,946
effective search space used: 1933774704
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
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