| Clone Name | bags11k12 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK062571.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-C06, full insert sequence Length = 1289 Score = 192 bits (97), Expect = 1e-45 Identities = 277/337 (82%) Strand = Plus / Plus Query: 9 aatttgaagtggattgtgaatatattcctgacgtttcagcaaaatatccattatttgtat 68 ||||||||||||||| ||||||||||| || |||| ||||||| ||| ||| ||| | Sbjct: 412 aatttgaagtggattctgaatatattcaagatatttctgcaaaatgcccactatgtgtgt 471 Query: 69 ctggaagattccgaggtgaactgccggagactctttatgctgagggctatttgtctgaca 128 |||| |||| || ||| | || || ||||| ||| ||| |||| || ||| |||||| Sbjct: 472 ctgggagataccaaggcaagcttccagagacacttactgccaagggttacttggctgaca 531 Query: 129 tgagtaagatatcgattgaattgaaggtccaacaaataaaggatatacctcttgacaaag 188 |||| | |||||||||||||||| ||||||||| |||||||||| |||||||||||| Sbjct: 532 tgagcgaaatatcgattgaattgagggtccaacatgtaaaggatatttctcttgacaaag 591 Query: 189 tgttggcaaagcaacagatggaccttctaacagcaaaagcttggctttctgaaaacaagc 248 |||| |||||||| |||||||| ||||| ||||||||||| ||| ||| ||||||||| | Sbjct: 592 tgttagcaaagcagcagatggatcttctcacagcaaaagcatggttttatgaaaacaatc 651 Query: 249 aactggagcaaatggtggcaaaaatgagcatacaaaatggcattccttcggagtacacac 308 |||| ||| | ||||| |||| | || |||||||| ||||||||||||||||||||| Sbjct: 652 aactagagatgaaggtggtaaaattaagtatacaaaacagcattccttcggagtacacac 711 Query: 309 ggacagtcctacttcaaaccatcatggaaaaaataga 345 | || |||||||||||| | || ||||||||||||| Sbjct: 712 gcactatcctacttcaaaacttcgtggaaaaaataga 748 Score = 135 bits (68), Expect = 2e-28 Identities = 80/84 (95%) Strand = Plus / Plus Query: 541 cggactgctgctgctgcatgtgcttcatcaactgctgcagcaagatgaacgaccagtgcg 600 |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 940 cggactgctgctgctgcatgtgcttcatcaacacctgcagcaagatgaacgaccggtgcg 999 Query: 601 ccatcgtcatggtgcagatgtgcg 624 ||||||||||||||||| |||||| Sbjct: 1000 ccatcgtcatggtgcagctgtgcg 1023
>gb|AY104391.1| Zea mays PCO073745 mRNA sequence Length = 1301 Score = 192 bits (97), Expect = 1e-45 Identities = 202/237 (85%) Strand = Plus / Plus Query: 123 ctgacatgagtaagatatcgattgaattgaaggtccaacaaataaaggatatacctcttg 182 ||||||||||| | ||||| ||||||||||| |||||||| ||||||||||||||||||| Sbjct: 532 ctgacatgagtgaaatatctattgaattgaaagtccaacatataaaggatatacctcttg 591 Query: 183 acaaagtgttggcaaagcaacagatggaccttctaacagcaaaagcttggctttctgaaa 242 | ||||| |||||||||||||||||||| ||||| ||||||||||| |||||| || | Sbjct: 592 ataaagtattggcaaagcaacagatggatcttctcacagcaaaagcatggcttatggaga 651 Query: 243 acaagcaactggagcaaatggtggcaaaaatgagcatacaaaatggcattccttcggagt 302 ||||| | || |||| || ||| | ||| | |||||||||||| || ||||||| |||| Sbjct: 652 acaaggagcttgagcgaaaggttgtgaaattaagcatacaaaatagccttccttctgagt 711 Query: 303 acacacggacagtcctacttcaaaccatcatggaaaaaatagatccagcacaacagg 359 ||||||| | || ||||||||||||| |||| |||||||||||||||||||||| Sbjct: 712 acacacgcatggtactacttcaaaccagtctggacaaaatagatccagcacaacagg 768 Score = 121 bits (61), Expect = 3e-24 Identities = 79/85 (92%) Strand = Plus / Plus Query: 533 ccgcgtggcggactgctgctgctgcatgtgcttcatcaactgctgcagcaagatgaacga 592 |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 950 ccgcatggcggactgctgctgctgcatgtgcttcatcaaggcgtgcagcaagatgaacga 1009 Query: 593 ccagtgcgccatcgtcatggtgcag 617 |||||||||||||||||||| |||| Sbjct: 1010 ccagtgcgccatcgtcatggcgcag 1034 Score = 73.8 bits (37), Expect = 6e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 11 tttgaagtggattgtgaatatattcctgacgtttcagcaaaatatccattatttgtatct 70 ||||||||||||| || ||||||||| ||| ||||||||||||||||||| | ||| ||| Sbjct: 420 tttgaagtggattctgtatatattccagacatttcagcaaaatatccattgtgtgtttct 479 Query: 71 ggaag 75 ||||| Sbjct: 480 ggaag 484
>gb|AC134886.5| Oryza sativa chromosome 3 BAC OSJNBa0002D18 genomic sequence, complete sequence Length = 145714 Score = 135 bits (68), Expect = 2e-28 Identities = 80/84 (95%) Strand = Plus / Plus Query: 541 cggactgctgctgctgcatgtgcttcatcaactgctgcagcaagatgaacgaccagtgcg 600 |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 73499 cggactgctgctgctgcatgtgcttcatcaacacctgcagcaagatgaacgaccggtgcg 73558 Query: 601 ccatcgtcatggtgcagatgtgcg 624 ||||||||||||||||| |||||| Sbjct: 73559 ccatcgtcatggtgcagctgtgcg 73582 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 278 atacaaaatggcattccttcggagtacacacggacagtcctacttcaaaccatcatggaa 337 |||||||| |||||||||||||||||||||| || |||||||||||| | || ||||| Sbjct: 72518 atacaaaacagcattccttcggagtacacacgcactatcctacttcaaaacttcgtggaa 72577 Query: 338 aaaataga 345 |||||||| Sbjct: 72578 aaaataga 72585 Score = 69.9 bits (35), Expect = 1e-08 Identities = 59/67 (88%) Strand = Plus / Plus Query: 123 ctgacatgagtaagatatcgattgaattgaaggtccaacaaataaaggatatacctcttg 182 |||||||||| | |||||||||||||||| ||||||||| |||||||||| |||||| Sbjct: 70862 ctgacatgagcgaaatatcgattgaattgagggtccaacatgtaaaggatatttctcttg 70921 Query: 183 acaaagt 189 ||||||| Sbjct: 70922 acaaagt 70928 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 188 gtgttggcaaagcaacagatggaccttctaacagcaaaagcttggctttctgaaaacaag 247 ||||| |||||||| |||||||| ||||| ||||||||||| ||| ||| ||||||||| Sbjct: 71821 gtgttagcaaagcagcagatggatcttctcacagcaaaagcatggttttatgaaaacaat 71880 Query: 248 caact 252 ||||| Sbjct: 71881 caact 71885
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 135 bits (68), Expect = 2e-28 Identities = 80/84 (95%) Strand = Plus / Minus Query: 541 cggactgctgctgctgcatgtgcttcatcaactgctgcagcaagatgaacgaccagtgcg 600 |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 16510834 cggactgctgctgctgcatgtgcttcatcaacacctgcagcaagatgaacgaccggtgcg 16510775 Query: 601 ccatcgtcatggtgcagatgtgcg 624 ||||||||||||||||| |||||| Sbjct: 16510774 ccatcgtcatggtgcagctgtgcg 16510751 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Minus Query: 278 atacaaaatggcattccttcggagtacacacggacagtcctacttcaaaccatcatggaa 337 |||||||| |||||||||||||||||||||| || |||||||||||| | || ||||| Sbjct: 16511815 atacaaaacagcattccttcggagtacacacgcactatcctacttcaaaacttcgtggaa 16511756 Query: 338 aaaataga 345 |||||||| Sbjct: 16511755 aaaataga 16511748 Score = 69.9 bits (35), Expect = 1e-08 Identities = 59/67 (88%) Strand = Plus / Minus Query: 123 ctgacatgagtaagatatcgattgaattgaaggtccaacaaataaaggatatacctcttg 182 |||||||||| | |||||||||||||||| ||||||||| |||||||||| |||||| Sbjct: 16513471 ctgacatgagcgaaatatcgattgaattgagggtccaacatgtaaaggatatttctcttg 16513412 Query: 183 acaaagt 189 ||||||| Sbjct: 16513411 acaaagt 16513405 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Minus Query: 188 gtgttggcaaagcaacagatggaccttctaacagcaaaagcttggctttctgaaaacaag 247 ||||| |||||||| |||||||| ||||| ||||||||||| ||| ||| ||||||||| Sbjct: 16512512 gtgttagcaaagcagcagatggatcttctcacagcaaaagcatggttttatgaaaacaat 16512453 Query: 248 caact 252 ||||| Sbjct: 16512452 caact 16512448
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 135 bits (68), Expect = 2e-28 Identities = 80/84 (95%) Strand = Plus / Minus Query: 541 cggactgctgctgctgcatgtgcttcatcaactgctgcagcaagatgaacgaccagtgcg 600 |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 16504467 cggactgctgctgctgcatgtgcttcatcaacacctgcagcaagatgaacgaccggtgcg 16504408 Query: 601 ccatcgtcatggtgcagatgtgcg 624 ||||||||||||||||| |||||| Sbjct: 16504407 ccatcgtcatggtgcagctgtgcg 16504384 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Minus Query: 278 atacaaaatggcattccttcggagtacacacggacagtcctacttcaaaccatcatggaa 337 |||||||| |||||||||||||||||||||| || |||||||||||| | || ||||| Sbjct: 16505448 atacaaaacagcattccttcggagtacacacgcactatcctacttcaaaacttcgtggaa 16505389 Query: 338 aaaataga 345 |||||||| Sbjct: 16505388 aaaataga 16505381 Score = 69.9 bits (35), Expect = 1e-08 Identities = 59/67 (88%) Strand = Plus / Minus Query: 123 ctgacatgagtaagatatcgattgaattgaaggtccaacaaataaaggatatacctcttg 182 |||||||||| | |||||||||||||||| ||||||||| |||||||||| |||||| Sbjct: 16507104 ctgacatgagcgaaatatcgattgaattgagggtccaacatgtaaaggatatttctcttg 16507045 Query: 183 acaaagt 189 ||||||| Sbjct: 16507044 acaaagt 16507038 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Minus Query: 188 gtgttggcaaagcaacagatggaccttctaacagcaaaagcttggctttctgaaaacaag 247 ||||| |||||||| |||||||| ||||| ||||||||||| ||| ||| ||||||||| Sbjct: 16506145 gtgttagcaaagcagcagatggatcttctcacagcaaaagcatggttttatgaaaacaat 16506086 Query: 248 caact 252 ||||| Sbjct: 16506085 caact 16506081
>ref|XM_479151.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1362 Score = 89.7 bits (45), Expect = 1e-14 Identities = 165/205 (80%) Strand = Plus / Plus Query: 123 ctgacatgagtaagatatcgattgaattgaaggtccaacaaataaaggatatacctcttg 182 |||||||||| |||| ||||||||| | ||||| || || |||||||||||||| |||| Sbjct: 492 ctgacatgagagagatctcgattgaacttaaggtgcagcatataaaggatataccccttg 551 Query: 183 acaaagtgttggcaaagcaacagatggaccttctaacagcaaaagcttggctttctgaaa 242 ||||||| ||||| || ||||| | |||||| ||||| || || ||||||||| Sbjct: 552 acaaagttttggcggcacagcagattggccttctcacagcgaaggcatggctttcttctg 611 Query: 243 acaagcaactggagcaaatggtggcaaaaatgagcatacaaaatggcattccttcggagt 302 |||||||||||||| || ||||| ||| | ||||| |||||| |||||||||| |||| Sbjct: 612 acaagcaactggagagaaaggtggtgaaactaagcattcaaaatagcattccttcagagt 671 Query: 303 acacacggacagtcctacttcaaac 327 |||| | | |||||||||||||| Sbjct: 672 acacgagcatggtcctacttcaaac 696 Score = 73.8 bits (37), Expect = 6e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 551 ctgctgcatgtgcttcatcaactgctgcagcaagatgaacgaccagtgcgccatcgt 607 |||||||||||||| |||||| ||||| ||||||||||||||||||||||||||| Sbjct: 922 ctgctgcatgtgctgcatcaaggcctgcaacaagatgaacgaccagtgcgccatcgt 978 Score = 40.1 bits (20), Expect = 8.5 Identities = 38/44 (86%) Strand = Plus / Plus Query: 9 aatttgaagtggattgtgaatatattcctgacgtttcagcaaaa 52 |||||||| | |||| |||||| ||||| ||| ||||||||||| Sbjct: 378 aatttgaaatcgattctgaatacattccagacatttcagcaaaa 421
>dbj|AK111336.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-181-F03, full insert sequence Length = 1362 Score = 89.7 bits (45), Expect = 1e-14 Identities = 165/205 (80%) Strand = Plus / Plus Query: 123 ctgacatgagtaagatatcgattgaattgaaggtccaacaaataaaggatatacctcttg 182 |||||||||| |||| ||||||||| | ||||| || || |||||||||||||| |||| Sbjct: 492 ctgacatgagagagatctcgattgaacttaaggtgcagcatataaaggatataccccttg 551 Query: 183 acaaagtgttggcaaagcaacagatggaccttctaacagcaaaagcttggctttctgaaa 242 ||||||| ||||| || ||||| | |||||| ||||| || || ||||||||| Sbjct: 552 acaaagttttggcggcacagcagattggccttctcacagcgaaggcatggctttcttctg 611 Query: 243 acaagcaactggagcaaatggtggcaaaaatgagcatacaaaatggcattccttcggagt 302 |||||||||||||| || ||||| ||| | ||||| |||||| |||||||||| |||| Sbjct: 612 acaagcaactggagagaaaggtggtgaaactaagcattcaaaatagcattccttcagagt 671 Query: 303 acacacggacagtcctacttcaaac 327 |||| | | |||||||||||||| Sbjct: 672 acacgagcatggtcctacttcaaac 696 Score = 73.8 bits (37), Expect = 6e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 551 ctgctgcatgtgcttcatcaactgctgcagcaagatgaacgaccagtgcgccatcgt 607 |||||||||||||| |||||| ||||| ||||||||||||||||||||||||||| Sbjct: 922 ctgctgcatgtgctgcatcaaggcctgcaacaagatgaacgaccagtgcgccatcgt 978 Score = 40.1 bits (20), Expect = 8.5 Identities = 38/44 (86%) Strand = Plus / Plus Query: 9 aatttgaagtggattgtgaatatattcctgacgtttcagcaaaa 52 |||||||| | |||| |||||| ||||| ||| ||||||||||| Sbjct: 378 aatttgaaatcgattctgaatacattccagacatttcagcaaaa 421
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 73.8 bits (37), Expect = 6e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 551 ctgctgcatgtgcttcatcaactgctgcagcaagatgaacgaccagtgcgccatcgt 607 |||||||||||||| |||||| ||||| ||||||||||||||||||||||||||| Sbjct: 25251655 ctgctgcatgtgctgcatcaaggcctgcaacaagatgaacgaccagtgcgccatcgt 25251711 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 123 ctgacatgagtaagatatcgattgaattgaaggtccaacaaataaaggatatacctcttg 182 |||||||||| |||| ||||||||| | ||||| || || |||||||||||||| |||| Sbjct: 25249938 ctgacatgagagagatctcgattgaacttaaggtgcagcatataaaggatataccccttg 25249997 Query: 183 acaaagt 189 ||||||| Sbjct: 25249998 acaaagt 25250004 Score = 42.1 bits (21), Expect = 2.2 Identities = 45/53 (84%) Strand = Plus / Plus Query: 275 agcatacaaaatggcattccttcggagtacacacggacagtcctacttcaaac 327 ||||| |||||| |||||||||| |||||||| | | |||||||||||||| Sbjct: 25251251 agcattcaaaatagcattccttcagagtacacgagcatggtcctacttcaaac 25251303
>dbj|AP005198.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0616D06 Length = 153800 Score = 73.8 bits (37), Expect = 6e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 551 ctgctgcatgtgcttcatcaactgctgcagcaagatgaacgaccagtgcgccatcgt 607 |||||||||||||| |||||| ||||| ||||||||||||||||||||||||||| Sbjct: 68326 ctgctgcatgtgctgcatcaaggcctgcaacaagatgaacgaccagtgcgccatcgt 68382 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 123 ctgacatgagtaagatatcgattgaattgaaggtccaacaaataaaggatatacctcttg 182 |||||||||| |||| ||||||||| | ||||| || || |||||||||||||| |||| Sbjct: 66609 ctgacatgagagagatctcgattgaacttaaggtgcagcatataaaggatataccccttg 66668 Query: 183 acaaagt 189 ||||||| Sbjct: 66669 acaaagt 66675 Score = 42.1 bits (21), Expect = 2.2 Identities = 45/53 (84%) Strand = Plus / Plus Query: 275 agcatacaaaatggcattccttcggagtacacacggacagtcctacttcaaac 327 ||||| |||||| |||||||||| |||||||| | | |||||||||||||| Sbjct: 67922 agcattcaaaatagcattccttcagagtacacgagcatggtcctacttcaaac 67974
>emb|AL391989.9| Human DNA sequence from clone RP11-388E20 on chromosome 13 Contains a ribosomal protein L31 (RPL31) pseudogene, complete sequence Length = 167496 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 360 gaaaacagaaaccaaagaaaccagaggag 388 ||||||||||| ||||||||||||||||| Sbjct: 100549 gaaaacagaaagcaaagaaaccagaggag 100521
>dbj|AB055861.1| Procambarus clarkii I-con mRNA for I-connectin, complete cds Length = 53424 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Plus Query: 368 aaaccaaagaaaccagaggagcct 391 |||||||||||||||||||||||| Sbjct: 46553 aaaccaaagaaaccagaggagcct 46576
>ref|XM_417492.1| PREDICTED: Gallus gallus similar to chromosome 20 open reading frame 86 (LOC419320), mRNA Length = 804 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 606 gtcatggtgcagatgtgcgct 626 ||||||||||||||||||||| Sbjct: 527 gtcatggtgcagatgtgcgct 547
>gb|AC006679.2| Caenorhabditis elegans cosmid R13A5, complete sequence Length = 56448 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 46 agcaaaatatccattatttgt 66 ||||||||||||||||||||| Sbjct: 654 agcaaaatatccattatttgt 634
>gb|AY424657.1| Mirounga leonina sex determining region Y protein (SRY) gene, complete cds Length = 1234 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 307 acggacagtcctacttcaaaccatc 331 |||||||||||||| |||||||||| Sbjct: 500 acggacagtcctacctcaaaccatc 524
>gb|AY424656.1| Mirounga angustirostris sex determining region Y protein (SRY) gene, complete cds Length = 1235 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 307 acggacagtcctacttcaaaccatc 331 |||||||||||||| |||||||||| Sbjct: 501 acggacagtcctacctcaaaccatc 525
>ref|XM_738614.1| Plasmodium chabaudi chabaudi acetyl CoA synthetase (PC000317.04.0) partial mRNA Length = 1764 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 54 atccattatttgtatctggaa 74 ||||||||||||||||||||| Sbjct: 1154 atccattatttgtatctggaa 1174
>emb|AL445645.10| Human DNA sequence from clone RP11-295G24 on chromosome 9 Contains the TSC1 gene for tuberous sclerosis 1, the C9orf9 gene for chromosome 9 open reading frame 9 protein, the 5' end of gene FLJ32704, two novel gene, the 5' end of a novel gene and three CpG islands, complete sequence Length = 199113 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 256 gcaaatggtggcaaaaatgag 276 ||||||||||||||||||||| Sbjct: 35708 gcaaatggtggcaaaaatgag 35688
>dbj|AP008934.1| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 DNA, complete genome Length = 2516575 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 558 atgtgcttcatcaactgctgc 578 ||||||||||||||||||||| Sbjct: 1693553 atgtgcttcatcaactgctgc 1693573
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 525 gctgcggcccgcgtggcggac 545 ||||||||||||||||||||| Sbjct: 824255 gctgcggcccgcgtggcggac 824275
>gb|AC171011.2| Gallus gallus BAC clone CH261-112C5 from chromosome ul, complete sequence Length = 230767 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 359 ggaaaacagaaaccaaagaaa 379 ||||||||||||||||||||| Sbjct: 182372 ggaaaacagaaaccaaagaaa 182352
>emb|AL136296.3|CNS01DW0 Human chromosome 14 DNA sequence BAC R-588D7 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 192404 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 360 gaaaacagaaaccaaagaaaccaga 384 |||||||||||| |||||||||||| Sbjct: 96414 gaaaacagaaacaaaagaaaccaga 96438
>gb|AC000392.1|AC000392 Genomic sequence from Human 9q34, complete sequence Length = 44266 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 256 gcaaatggtggcaaaaatgag 276 ||||||||||||||||||||| Sbjct: 33668 gcaaatggtggcaaaaatgag 33688
>ref|NM_112018.3| Arabidopsis thaliana unknown protein AT3G11850 transcript variant AT3G11850.1 mRNA, complete cds Length = 1976 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 561 tgcttcatcaactgctgcag 580 |||||||||||||||||||| Sbjct: 400 tgcttcatcaactgctgcag 419
>ref|NM_202560.1| Arabidopsis thaliana unknown protein AT3G11850 transcript variant AT3G11850.2 mRNA, complete cds Length = 2360 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 561 tgcttcatcaactgctgcag 580 |||||||||||||||||||| Sbjct: 784 tgcttcatcaactgctgcag 803
>gb|AC154483.2| Mus musculus BAC clone RP24-113B3 from chromosome 17, complete sequence Length = 182923 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 511 ggcggtgggcggctgctgcg 530 |||||||||||||||||||| Sbjct: 51677 ggcggtgggcggctgctgcg 51696
>gb|AE008427.1| Streptococcus pneumoniae R6 section 43 of 184 of the complete genome Length = 10940 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 323 caaaccatcatggaaaaaat 342 |||||||||||||||||||| Sbjct: 4733 caaaccatcatggaaaaaat 4752
>gb|CP000067.1| Trypanosoma brucei chromosome 4, complete sequence Length = 1590432 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 545 ctgctgctgctgcatgtgct 564 |||||||||||||||||||| Sbjct: 1344999 ctgctgctgctgcatgtgct 1345018
>gb|AC079815.9| Trypanosoma brucei chromosome 4 clone RPCI93-3M17, complete sequence Length = 144365 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 545 ctgctgctgctgcatgtgct 564 |||||||||||||||||||| Sbjct: 22886 ctgctgctgctgcatgtgct 22905
>gb|AC006776.1| Caenorhabditis elegans cosmid Y46H3C, complete sequence Length = 32263 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 361 aaaacagaaaccaaagaaaccaga 384 ||||||||||||| |||||||||| Sbjct: 29208 aaaacagaaaccacagaaaccaga 29185
>gb|BC013341.1| Mus musculus arginase 1, liver, mRNA (cDNA clone MGC:13983 IMAGE:4163626), complete cds Length = 1453 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 545 ctgctgctgctgcatgtgct 564 |||||||||||||||||||| Sbjct: 58 ctgctgctgctgcatgtgct 39
>ref|NM_007482.2| Mus musculus arginase 1, liver (Arg1), mRNA Length = 1453 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 545 ctgctgctgctgcatgtgct 564 |||||||||||||||||||| Sbjct: 58 ctgctgctgctgcatgtgct 39
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 54 atccattatttgtatctgga 73 |||||||||||||||||||| Sbjct: 6149557 atccattatttgtatctgga 6149576 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 atccattatttgtatctgga 73 |||||||||||||||||||| Sbjct: 5929661 atccattatttgtatctgga 5929642
>gb|AC159502.12| Mus musculus 10 BAC RP23-113B7 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 226276 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 545 ctgctgctgctgcatgtgct 564 |||||||||||||||||||| Sbjct: 196614 ctgctgctgctgcatgtgct 196633
>ref|XR_003217.1| PREDICTED: Mus musculus similar to nuclease sensitive element binding protein 1 (LOC624960), mRNA Length = 1203 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 511 ggcggtgggcggctgctgcg 530 |||||||||||||||||||| Sbjct: 39 ggcggtgggcggctgctgcg 20
>ref|XM_821350.1| Trypanosoma brucei TREU927 clone RPCI93-3M17 3,2-trans-enoyl-CoA isomerase (Tb927.4.4910) partial mRNA Length = 1203 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 545 ctgctgctgctgcatgtgct 564 |||||||||||||||||||| Sbjct: 315 ctgctgctgctgcatgtgct 296
>gb|AC016795.6|ATAC016795 Arabidopsis thaliana chromosome III BAC F26K24 genomic sequence, complete sequence Length = 100835 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 561 tgcttcatcaactgctgcag 580 |||||||||||||||||||| Sbjct: 41368 tgcttcatcaactgctgcag 41349
>gb|AC129213.4| Mus musculus BAC clone RP24-391M2 from chromosome 6, complete sequence Length = 154613 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 gaaaacagaaaccaaagaaa 379 |||||||||||||||||||| Sbjct: 21801 gaaaacagaaaccaaagaaa 21820
>gb|AC083946.5| Mus musculus strain C57BL6/J chromosome 6 clone RP23-132J21, complete sequence Length = 200910 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 gaaaacagaaaccaaagaaa 379 |||||||||||||||||||| Sbjct: 111366 gaaaacagaaaccaaagaaa 111385
>emb|CR712181.2|CNS0GCGX Tetraodon nigroviridis full-length cDNA Length = 483 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 545 ctgctgctgctgcatgtgct 564 |||||||||||||||||||| Sbjct: 25 ctgctgctgctgcatgtgct 44
>gb|AC157319.2| Zea mays clone ZMMBBb-136E2, complete sequence Length = 138186 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 367 gaaaccaaagaaaccagaggagcc 390 ||||||||| |||||||||||||| Sbjct: 131378 gaaaccaaacaaaccagaggagcc 131401
>emb|AL713859.9| Human DNA sequence from clone RP11-242B9 on chromosome 1 Contains part of a novel gene (FLJ10986), complete sequence Length = 105393 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 361 aaaacagaaaccaaagaaac 380 |||||||||||||||||||| Sbjct: 37661 aaaacagaaaccaaagaaac 37642
>emb|AL390878.6| Human DNA sequence from clone RP11-442F12 on chromosome 13 Contains part of the DIAPH3 gene for diaphanous homolog 3 (Drosophila) and a novel gene, complete sequence Length = 209794 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 aacagaaaccaaagaaacca 382 |||||||||||||||||||| Sbjct: 117286 aacagaaaccaaagaaacca 117305
>emb|AL358178.14| Human DNA sequence from clone RP11-812I20 on chromosome 6 Contains part of the gene for CD2-associated protein and a 40S ribosomal protein S12 (RPS12) pseudogene, complete sequence Length = 77432 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 aacagaaaccaaagaaacca 382 |||||||||||||||||||| Sbjct: 33880 aacagaaaccaaagaaacca 33899
>gb|AC098697.4| Rattus norvegicus strain Brown Norway clone RP31-387A21, complete sequence Length = 123000 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 365 cagaaaccaaagaaaccaga 384 |||||||||||||||||||| Sbjct: 8927 cagaaaccaaagaaaccaga 8908
>ref|XM_781860.1| PREDICTED: Strongylocentrotus purpuratus similar to methyl-CpG binding domain protein 5 (LOC581882), mRNA Length = 5256 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 545 ctgctgctgctgcatgtgct 564 |||||||||||||||||||| Sbjct: 660 ctgctgctgctgcatgtgct 641
>emb|BX049137.1|CNS09A2T Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC24DD10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 693 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 545 ctgctgctgctgcatgtgct 564 |||||||||||||||||||| Sbjct: 341 ctgctgctgctgcatgtgct 360
>emb|BX024349.1|CNS08QY9 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA37AE08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 875 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 545 ctgctgctgctgcatgtgct 564 |||||||||||||||||||| Sbjct: 273 ctgctgctgctgcatgtgct 292
>emb|BX024348.1|CNS08QY8 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA37AE08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 962 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 545 ctgctgctgctgcatgtgct 564 |||||||||||||||||||| Sbjct: 949 ctgctgctgctgcatgtgct 930
>emb|BX008180.1|CNS08EH4 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA13CB07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 980 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 545 ctgctgctgctgcatgtgct 564 |||||||||||||||||||| Sbjct: 936 ctgctgctgctgcatgtgct 917
>emb|BX006263.1|CNS08CZV Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA10CE12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 920 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 545 ctgctgctgctgcatgtgct 564 |||||||||||||||||||| Sbjct: 203 ctgctgctgctgcatgtgct 222
>gb|AY128893.1| Arabidopsis thaliana unknown protein (At3g11850) mRNA, complete cds Length = 1687 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 561 tgcttcatcaactgctgcag 580 |||||||||||||||||||| Sbjct: 264 tgcttcatcaactgctgcag 283
>gb|AC010573.4| Drosophila melanogaster 3L BAC RP98-2M13 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 181927 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 514 ggtgggcggctgctgcggcc 533 |||||||||||||||||||| Sbjct: 52661 ggtgggcggctgctgcggcc 52680
>dbj|AK091776.1| Homo sapiens cDNA FLJ34457 fis, clone HLUNG2002707 Length = 2189 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 270 aaatgagcatacaaaatggcattc 293 |||||| ||||||||||||||||| Sbjct: 5 aaatgaccatacaaaatggcattc 28
>gb|AY099765.1| Arabidopsis thaliana unknown protein (At3g11850) mRNA, complete cds Length = 1922 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 561 tgcttcatcaactgctgcag 580 |||||||||||||||||||| Sbjct: 399 tgcttcatcaactgctgcag 418
>ref|NM_165844.1| Drosophila melanogaster toutatis CG10897-RB, transcript variant B (tou), mRNA Length = 2926 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 545 ctgctgctgctgcatgtgct 564 |||||||||||||||||||| Sbjct: 881 ctgctgctgctgcatgtgct 862
>ref|NM_165843.1| Drosophila melanogaster toutatis CG10897-RD, transcript variant D (tou), mRNA Length = 2840 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 545 ctgctgctgctgcatgtgct 564 |||||||||||||||||||| Sbjct: 881 ctgctgctgctgcatgtgct 862
>ref|NM_165842.1| Drosophila melanogaster toutatis CG10897-RC, transcript variant C (tou), mRNA Length = 3067 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 545 ctgctgctgctgcatgtgct 564 |||||||||||||||||||| Sbjct: 1108 ctgctgctgctgcatgtgct 1089
>ref|NM_140438.2| Drosophila melanogaster Sox21b CG32139-RA (Sox21b), mRNA Length = 2670 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 514 ggtgggcggctgctgcggcc 533 |||||||||||||||||||| Sbjct: 914 ggtgggcggctgctgcggcc 895
>ref|NM_078977.2| Drosophila melanogaster toutatis CG10897-RA, transcript variant A (tou), mRNA Length = 10497 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 545 ctgctgctgctgcatgtgct 564 |||||||||||||||||||| Sbjct: 8538 ctgctgctgctgcatgtgct 8519
>dbj|AK135257.1| Mus musculus 12 days embryo male wolffian duct includes surrounding region cDNA, RIKEN full-length enriched library, clone:6720448E24 product:unclassifiable, full insert sequence Length = 2121 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 545 ctgctgctgctgcatgtgct 564 |||||||||||||||||||| Sbjct: 1894 ctgctgctgctgcatgtgct 1913
>gb|BC114311.1| Danio rerio cDNA clone IMAGE:7995366, partial cds Length = 1457 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 563 cttcatcaactgctgcagca 582 |||||||||||||||||||| Sbjct: 263 cttcatcaactgctgcagca 282
>dbj|AK149471.1| Mus musculus adult male liver tumor cDNA, RIKEN full-length enriched library, clone:C730019N20 product:arginase 1, liver, full insert sequence Length = 1457 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 545 ctgctgctgctgcatgtgct 564 |||||||||||||||||||| Sbjct: 64 ctgctgctgctgcatgtgct 45
>gb|AY060335.1| Drosophila melanogaster GH22615 full length cDNA Length = 2311 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 545 ctgctgctgctgcatgtgct 564 |||||||||||||||||||| Sbjct: 881 ctgctgctgctgcatgtgct 862
>emb|AL844155.6| Mouse DNA sequence from clone RP23-163L4 on chromosome 2, complete sequence Length = 193188 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 360 gaaaacagaaaccaaagaaa 379 |||||||||||||||||||| Sbjct: 106016 gaaaacagaaaccaaagaaa 105997
>gb|AY058313.1| Drosophila melanogaster GH07353 full length cDNA Length = 2669 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 514 ggtgggcggctgctgcggcc 533 |||||||||||||||||||| Sbjct: 914 ggtgggcggctgctgcggcc 895
>gb|AY052047.1| Drosophila melanogaster LP06732 full length cDNA Length = 3087 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 545 ctgctgctgctgcatgtgct 564 |||||||||||||||||||| Sbjct: 1108 ctgctgctgctgcatgtgct 1089
>gb|AF314193.1| Drosophila melanogaster Toutatis (tou) gene, complete cds Length = 39574 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 545 ctgctgctgctgcatgtgct 564 |||||||||||||||||||| Sbjct: 36426 ctgctgctgctgcatgtgct 36407
>gb|AY074884.1|AY074883S2 Mus musculus arginase I gene, proximal promoter region, exon 1 and partial cds Length = 245 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 545 ctgctgctgctgcatgtgct 564 |||||||||||||||||||| Sbjct: 167 ctgctgctgctgcatgtgct 148
>gb|AC007473.10|AC007473 Drosophila melanogaster, chromosome 2R, region 48A-48B, BAC clone BACR38D12, complete sequence Length = 171831 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 545 ctgctgctgctgcatgtgct 564 |||||||||||||||||||| Sbjct: 37578 ctgctgctgctgcatgtgct 37597
>gb|AC137484.2| Rattus Norvegicus Strain BN/SsNHsd/MCW BAC, CH230-349A03, complete sequence Length = 164897 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 369 aaccaaagaaaccagaggag 388 |||||||||||||||||||| Sbjct: 30781 aaccaaagaaaccagaggag 30800
>gb|AE005672.2| Streptococcus pneumoniae TIGR4, complete genome Length = 2160842 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 323 caaaccatcatggaaaaaat 342 |||||||||||||||||||| Sbjct: 521697 caaaccatcatggaaaaaat 521716
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 598 gcgccatcgtcatggtgcag 617 |||||||||||||||||||| Sbjct: 1668309 gcgccatcgtcatggtgcag 1668290
>ref|XM_317381.2| Anopheles gambiae str. PEST ENSANGP00000011651 (ENSANGG00000009162), mRNA Length = 939 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 545 ctgctgctgctgcatgtgct 564 |||||||||||||||||||| Sbjct: 928 ctgctgctgctgcatgtgct 909
>gb|U51805.1|MMU51805 Mus musculus arginase mRNA, complete cds Length = 1221 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 545 ctgctgctgctgcatgtgct 564 |||||||||||||||||||| Sbjct: 120 ctgctgctgctgcatgtgct 101
>gb|AE003825.3| Drosophila melanogaster chromosome 2R, section 25 of 73 of the complete sequence Length = 261690 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 545 ctgctgctgctgcatgtgct 564 |||||||||||||||||||| Sbjct: 115751 ctgctgctgctgcatgtgct 115770
>gb|AE003535.3| Drosophila melanogaster chromosome 3L, section 50 of 83 of the complete sequence Length = 278708 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 514 ggtgggcggctgctgcggcc 533 |||||||||||||||||||| Sbjct: 35258 ggtgggcggctgctgcggcc 35277
>gb|AC129321.5| Mus musculus BAC clone RP24-160I20 from 8, complete sequence Length = 198439 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 545 ctgctgctgctgcatgtgct 564 |||||||||||||||||||| Sbjct: 105938 ctgctgctgctgcatgtgct 105919
>emb|CT009755.8| Mouse DNA sequence from clone RP23-50F19 on chromosome 17, complete sequence Length = 215207 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 511 ggcggtgggcggctgctgcg 530 |||||||||||||||||||| Sbjct: 7486 ggcggtgggcggctgctgcg 7467
>emb|AL731820.14| Mouse DNA sequence from clone RP23-135H19 on chromosome X, complete sequence Length = 168773 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 agggaaaacagaaaccaaag 376 |||||||||||||||||||| Sbjct: 122924 agggaaaacagaaaccaaag 122905 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,492,780 Number of Sequences: 3902068 Number of extensions: 6492780 Number of successful extensions: 151785 Number of sequences better than 10.0: 79 Number of HSP's better than 10.0 without gapping: 79 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 151320 Number of HSP's gapped (non-prelim): 460 length of query: 627 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 604 effective length of database: 17,143,297,704 effective search space: 10354551813216 effective search space used: 10354551813216 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)