ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal9f21 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY039003.1| Hordeum vulgare subsp. vulgare Mg-chelatase subunit XANTHA-F (Xantha-f) gene, complete cds Length = 6252 Score = 1267 bits (639), Expect = 0.0 Identities = 657/661 (99%), Gaps = 2/661 (0%) Strand = Plus / Minus Query: 1 tgcttcctttttac-ttnncaacgaacc-ccctctttgttaaaggtctgtattgcatgtt 58 |||||||||||||| || ||||||||| ||||||||||||||||||||||||||||||| Sbjct: 6088 tgcttcctttttacattcacaacgaaccaccctctttgttaaaggtctgtattgcatgtt 6029 Query: 59 acaacttatataaattacaaattatacaagtttcaactcaacgaggcagaagaattcctt 118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6028 acaacttatataaattacaaattatacaagtttcaactcaacgaggcagaagaattcctt 5969 Query: 119 cttggtcaagtgctggaactggttgatcagtgaaatgagttcaccggtcaattccttcga 178 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5968 cttggtcaagtgctggaactggttgatcagtgaaatgagttcaccggtcaattccttcga 5909 Query: 179 tcttgtcttcaacctccgagtagagctccctgagcctttccaagttatcctctgatgtct 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5908 tcttgtcttcaacctccgagtagagctccctgagcctttccaagttatcctctgatgtct 5849 Query: 239 cccagtagcctctgccatttgcttctaggaaggtttgaagcagcttcctgaacgaattgg 298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5848 cccagtagcctctgccatttgcttctaggaaggtttgaagcagcttcctgaacgaattgg 5789 Query: 299 gattagtgtccatcagcctcttcctcatctcttcatcttcgatgaatgtggtatttgctt 358 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5788 gattagtgtccatcagcctcttcctcatctcttcatcttcgatgaatgtggtatttgctt 5729 Query: 359 cctcgtaaacccagttgtccacctgcccggatgttgcactccatccaacagtatttgtca 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5728 cctcgtaaacccagttgtccacctgcccggatgttgcactccatccaacagtatttgtca 5669 Query: 419 gccgcttctcgatctctctaactccctcatagccactcttcatcatcccctcataccacc 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5668 gccgcttctcgatctctctaactccctcatagccactcttcatcatcccctcataccacc 5609 Query: 479 tagggttcagtagctttgtccttgcatcaagacgcaccgtctccgacaatgtacgcacct 538 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5608 tagggttcagtagctttgtccttgcatcaagacgcaccgtctccgacaatgtacgcacct 5549 Query: 539 gtgcatttgctgtggttgtgtctgctatgtacgaggaaggcgcccgcccatccttccgca 598 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5548 gtgcatttgctgtggttgtgtctgctatgtacgaggaaggcgcccgcccatccttccgca 5489 Query: 599 gcccttgcaccagcttcgtcgggtctgagtcgaagtagtggctgacatctgtcaatgaga 658 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5488 gcccttgcaccagcttcgtcgggtctgagtcgaagtagtggctgacatctgtcaatgaga 5429 Query: 659 t 659 | Sbjct: 5428 t 5428
>gb|U26916.1|HVU26916 Hordeum vulgare protoporphyrin IX Mg-chelatase subunit precursor (Xantha-f) gene, complete cds Length = 6364 Score = 1259 bits (635), Expect = 0.0 Identities = 656/661 (99%), Gaps = 2/661 (0%) Strand = Plus / Minus Query: 1 tgcttcctttttac-ttnncaacgaacc-ccctctttgttaaaggtctgtattgcatgtt 58 |||||||||||||| || ||||||||| ||||||||||||||||||||||||||||||| Sbjct: 6102 tgcttcctttttacattcacaacgaaccaccctctttgttaaaggtctgtattgcatgtt 6043 Query: 59 acaacttatataaattacaaattatacaagtttcaactcaacgaggcagaagaattcctt 118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6042 acaacttatataaattacaaattatacaagtttcaactcaacgaggcagaagaattcctt 5983 Query: 119 cttggtcaagtgctggaactggttgatcagtgaaatgagttcaccggtcaattccttcga 178 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5982 cttggtcaagtgctggaactggttgatcagtgaaatgagttcaccggtcaattccttcga 5923 Query: 179 tcttgtcttcaacctccgagtagagctccctgagcctttccaagttatcctctgatgtct 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5922 tcttgtcttcaacctccgagtagagctccctgagcctttccaagttatcctctgatgtct 5863 Query: 239 cccagtagcctctgccatttgcttctaggaaggtttgaagcagcttcctgaacgaattgg 298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5862 cccagtagcctctgccatttgcttctaggaaggtttgaagcagcttcctgaacgaattgg 5803 Query: 299 gattagtgtccatcagcctcttcctcatctcttcatcttcgatgaatgtggtatttgctt 358 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5802 gattagtgtccatcagcctcttcctcatctcttcatcttcgatgaatgtggtatttgctt 5743 Query: 359 cctcgtaaacccagttgtccacctgcccggatgttgcactccatccaacagtatttgtca 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5742 cctcgtaaacccagttgtccacctgcccggatgttgcactccatccaacagtatttgtca 5683 Query: 419 gccgcttctcgatctctctaactccctcatagccactcttcatcatcccctcataccacc 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5682 gccgcttctcgatctctctaactccctcatagccactcttcatcatcccctcataccacc 5623 Query: 479 tagggttcagtagctttgtccttgcatcaagacgcaccgtctccgacaatgtacgcacct 538 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5622 tagggttcagtagctttgtccttgcatcaagacgcaccgtctccgacaatgtacgcacct 5563 Query: 539 gtgcatttgctgtggttgtgtctgctatgtacgaggaaggcgcccgcccatccttccgca 598 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 5562 gtgcatttgctgtggttgtgtctgctatggacgaggaaggcgcccgcccatccttccgca 5503 Query: 599 gcccttgcaccagcttcgtcgggtctgagtcgaagtagtggctgacatctgtcaatgaga 658 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5502 gcccttgcaccagcttcgtcgggtctgagtcgaagtagtggctgacatctgtcaatgaga 5443 Query: 659 t 659 | Sbjct: 5442 t 5442
>gb|BT009033.1| Triticum aestivum clone wdk4c.pk005.f24:fis, full insert mRNA sequence Length = 3257 Score = 1080 bits (545), Expect = 0.0 Identities = 621/644 (96%), Gaps = 3/644 (0%) Strand = Plus / Minus Query: 19 caacgaacc-ccctctttgttaaaggtctgtattgcatgttacaacttatataaattaca 77 ||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||| ||| Sbjct: 3241 caacgaaccaccctctttgttaaaggtctgtatggcatgttacaacttttataaatcaca 3182 Query: 78 aattatacaagtttcaactcaacgaggcagaagaat--tccttcttggtcaagtgctgga 135 ||||||||||||||| ||||| | |||||||||||| | |||||||||||| ||||||| Sbjct: 3181 aattatacaagtttcgactcagcaaggcagaagaatatttcttcttggtcaaatgctgga 3122 Query: 136 actggttgatcagtgaaatgagttcaccggtcaattccttcgatcttgtcttcaacctcc 195 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3121 actggttgatcagtgaaatgagttcaccggtcaattccttcgatcttgtcttcaacctcc 3062 Query: 196 gagtagagctccctgagcctttccaagttatcctctgatgtctcccagtagcctctgcca 255 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 3061 gagtagagctccctgagcctttccaagttatcctctgatgtctcccagtagcccctgcca 3002 Query: 256 tttgcttctaggaaggtttgaagcagcttcctgaacgaattgggattagtgtccatcagc 315 |||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| Sbjct: 3001 tttgcttctaggaaggtttgaagcagtttcctgaacgaattggggttggtgtccatcagc 2942 Query: 316 ctcttcctcatctcttcatcttcgatgaatgtggtatttgcttcctcgtaaacccagttg 375 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 2941 ctcttcctcatctcttcatcttcaatgaatgtggtatttgcttcctcgtaaacccagttg 2882 Query: 376 tccacctgcccggatgttgcactccatccaacagtatttgtcagccgcttctcgatctct 435 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2881 tccacctgcccggatgttgcactccatccaacagtatttgtcagccgcttctcgatctct 2822 Query: 436 ctaactccctcatagccactcttcatcatcccctcataccacctagggttcagtagcttt 495 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 2821 ctaactccctcatagccactcttcatcatcccctcgtaccacctagggttcagtagcttt 2762 Query: 496 gtccttgcatcaagacgcaccgtctccgacaatgtacgcacctgtgcatttgctgtggtt 555 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 2761 gtccttgcatcaagacgcaccgtctccgacaatgtccgcacctgtgcatttgccgtggtt 2702 Query: 556 gtgtctgctatgtacgaggaaggcgcccgcccatccttccgcagcccttgcaccagcttc 615 ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 2701 gtgtctgctatgtacgatgaaggtgcccgcccatccttccgcagcccttgcaccagcttc 2642 Query: 616 gtcgggtctgagtcgaagtagtggctgacatctgtcaatgagat 659 |||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 2641 gtcgggtctgagtcgaagtagtggctgacatccgtcagtgagat 2598
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 638 bits (322), Expect = e-180 Identities = 448/490 (91%) Strand = Plus / Minus Query: 161 accggtcaattccttcgatcttgtcttcaacctccgagtagagctccctgagcctttcca 220 |||||||||||||||| ||||||||||||||||| |||||||||||||||||| |||||| Sbjct: 11691872 accggtcaattccttcaatcttgtcttcaacctcagagtagagctccctgagcttttcca 11691813 Query: 221 agttatcctctgatgtctcccagtagcctctgccatttgcttctaggaaggtttgaagca 280 |||| |||||||||||||||||||||||||||||| | |||||||||||||| |||| | Sbjct: 11691812 agttttcctctgatgtctcccagtagcctctgccactggcttctaggaaggtctgaacta 11691753 Query: 281 gcttcctgaacgaattgggattagtgtccatcagcctcttcctcatctcttcatcttcga 340 |||||||||| |||||||| || |||||||| |||||||||||||| | |||||||| | Sbjct: 11691752 gcttcctgaatgaattggggttggtgtccatgagcctcttcctcatagcctcatcttcaa 11691693 Query: 341 tgaatgtggtatttgcttcctcgtaaacccagttgtccacctgcccggatgttgcactcc 400 | ||||||| |||||| ||||| |||||||||||||| ||||| || ||||||||||||| Sbjct: 11691692 taaatgtggcatttgcctcctcataaacccagttgtcaacctgtccagatgttgcactcc 11691633 Query: 401 atccaacagtatttgtcagccgcttctcgatctctctaactccctcatagccactcttca 460 |||||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||| Sbjct: 11691632 atccaacagtatttgtcagccgcttctcaatctctctaactccctcgtagccacttttca 11691573 Query: 461 tcatcccctcataccacctagggttcagtagctttgtccttgcatcaagacgcaccgtct 520 |||||||||| |||||| ||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 11691572 tcatcccctcgtaccacttagggttcagtagctttgtccttgcatcaaggcgcactgtct 11691513 Query: 521 ccgacaatgtacgcacctgtgcatttgctgtggttgtgtctgctatgtacgaggaaggcg 580 | |||||||| | |||||||||||||||||||||||| ||||||||||| |||||||| | Sbjct: 11691512 ctgacaatgtcctcacctgtgcatttgctgtggttgtatctgctatgtatgaggaaggtg 11691453 Query: 581 cccgcccatccttccgcagcccttgcaccagcttcgtcgggtctgagtcgaagtagtggc 640 ||||||||||||| ||||| |||||||||||||| |||||||||||||| |||||||||| Sbjct: 11691452 cccgcccatccttgcgcagtccttgcaccagctttgtcgggtctgagtcaaagtagtggc 11691393 Query: 641 tgacatctgt 650 | |||||||| Sbjct: 11691392 tcacatctgt 11691383 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 583 cgcccatccttccgcagccc 602 |||||||||||||||||||| Sbjct: 29587326 cgcccatccttccgcagccc 29587307
>gb|AC118674.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0093J20, from chromosome 3, complete sequence Length = 148635 Score = 638 bits (322), Expect = e-180 Identities = 448/490 (91%) Strand = Plus / Minus Query: 161 accggtcaattccttcgatcttgtcttcaacctccgagtagagctccctgagcctttcca 220 |||||||||||||||| ||||||||||||||||| |||||||||||||||||| |||||| Sbjct: 80967 accggtcaattccttcaatcttgtcttcaacctcagagtagagctccctgagcttttcca 80908 Query: 221 agttatcctctgatgtctcccagtagcctctgccatttgcttctaggaaggtttgaagca 280 |||| |||||||||||||||||||||||||||||| | |||||||||||||| |||| | Sbjct: 80907 agttttcctctgatgtctcccagtagcctctgccactggcttctaggaaggtctgaacta 80848 Query: 281 gcttcctgaacgaattgggattagtgtccatcagcctcttcctcatctcttcatcttcga 340 |||||||||| |||||||| || |||||||| |||||||||||||| | |||||||| | Sbjct: 80847 gcttcctgaatgaattggggttggtgtccatgagcctcttcctcatagcctcatcttcaa 80788 Query: 341 tgaatgtggtatttgcttcctcgtaaacccagttgtccacctgcccggatgttgcactcc 400 | ||||||| |||||| ||||| |||||||||||||| ||||| || ||||||||||||| Sbjct: 80787 taaatgtggcatttgcctcctcataaacccagttgtcaacctgtccagatgttgcactcc 80728 Query: 401 atccaacagtatttgtcagccgcttctcgatctctctaactccctcatagccactcttca 460 |||||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||| Sbjct: 80727 atccaacagtatttgtcagccgcttctcaatctctctaactccctcgtagccacttttca 80668 Query: 461 tcatcccctcataccacctagggttcagtagctttgtccttgcatcaagacgcaccgtct 520 |||||||||| |||||| ||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 80667 tcatcccctcgtaccacttagggttcagtagctttgtccttgcatcaaggcgcactgtct 80608 Query: 521 ccgacaatgtacgcacctgtgcatttgctgtggttgtgtctgctatgtacgaggaaggcg 580 | |||||||| | |||||||||||||||||||||||| ||||||||||| |||||||| | Sbjct: 80607 ctgacaatgtcctcacctgtgcatttgctgtggttgtatctgctatgtatgaggaaggtg 80548 Query: 581 cccgcccatccttccgcagcccttgcaccagcttcgtcgggtctgagtcgaagtagtggc 640 ||||||||||||| ||||| |||||||||||||| |||||||||||||| |||||||||| Sbjct: 80547 cccgcccatccttgcgcagtccttgcaccagctttgtcgggtctgagtcaaagtagtggc 80488 Query: 641 tgacatctgt 650 | |||||||| Sbjct: 80487 tcacatctgt 80478
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 638 bits (322), Expect = e-180 Identities = 448/490 (91%) Strand = Plus / Minus Query: 161 accggtcaattccttcgatcttgtcttcaacctccgagtagagctccctgagcctttcca 220 |||||||||||||||| ||||||||||||||||| |||||||||||||||||| |||||| Sbjct: 11688635 accggtcaattccttcaatcttgtcttcaacctcagagtagagctccctgagcttttcca 11688576 Query: 221 agttatcctctgatgtctcccagtagcctctgccatttgcttctaggaaggtttgaagca 280 |||| |||||||||||||||||||||||||||||| | |||||||||||||| |||| | Sbjct: 11688575 agttttcctctgatgtctcccagtagcctctgccactggcttctaggaaggtctgaacta 11688516 Query: 281 gcttcctgaacgaattgggattagtgtccatcagcctcttcctcatctcttcatcttcga 340 |||||||||| |||||||| || |||||||| |||||||||||||| | |||||||| | Sbjct: 11688515 gcttcctgaatgaattggggttggtgtccatgagcctcttcctcatagcctcatcttcaa 11688456 Query: 341 tgaatgtggtatttgcttcctcgtaaacccagttgtccacctgcccggatgttgcactcc 400 | ||||||| |||||| ||||| |||||||||||||| ||||| || ||||||||||||| Sbjct: 11688455 taaatgtggcatttgcctcctcataaacccagttgtcaacctgtccagatgttgcactcc 11688396 Query: 401 atccaacagtatttgtcagccgcttctcgatctctctaactccctcatagccactcttca 460 |||||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||| Sbjct: 11688395 atccaacagtatttgtcagccgcttctcaatctctctaactccctcgtagccacttttca 11688336 Query: 461 tcatcccctcataccacctagggttcagtagctttgtccttgcatcaagacgcaccgtct 520 |||||||||| |||||| ||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 11688335 tcatcccctcgtaccacttagggttcagtagctttgtccttgcatcaaggcgcactgtct 11688276 Query: 521 ccgacaatgtacgcacctgtgcatttgctgtggttgtgtctgctatgtacgaggaaggcg 580 | |||||||| | |||||||||||||||||||||||| ||||||||||| |||||||| | Sbjct: 11688275 ctgacaatgtcctcacctgtgcatttgctgtggttgtatctgctatgtatgaggaaggtg 11688216 Query: 581 cccgcccatccttccgcagcccttgcaccagcttcgtcgggtctgagtcgaagtagtggc 640 ||||||||||||| ||||| |||||||||||||| |||||||||||||| |||||||||| Sbjct: 11688215 cccgcccatccttgcgcagtccttgcaccagctttgtcgggtctgagtcaaagtagtggc 11688156 Query: 641 tgacatctgt 650 | |||||||| Sbjct: 11688155 tcacatctgt 11688146 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 583 cgcccatccttccgcagccc 602 |||||||||||||||||||| Sbjct: 29678748 cgcccatccttccgcagccc 29678729
>dbj|AK069545.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023025I06, full insert sequence Length = 2911 Score = 638 bits (322), Expect = e-180 Identities = 448/490 (91%) Strand = Plus / Minus Query: 161 accggtcaattccttcgatcttgtcttcaacctccgagtagagctccctgagcctttcca 220 |||||||||||||||| ||||||||||||||||| |||||||||||||||||| |||||| Sbjct: 2712 accggtcaattccttcaatcttgtcttcaacctcagagtagagctccctgagcttttcca 2653 Query: 221 agttatcctctgatgtctcccagtagcctctgccatttgcttctaggaaggtttgaagca 280 |||| |||||||||||||||||||||||||||||| | |||||||||||||| |||| | Sbjct: 2652 agttttcctctgatgtctcccagtagcctctgccactggcttctaggaaggtctgaacta 2593 Query: 281 gcttcctgaacgaattgggattagtgtccatcagcctcttcctcatctcttcatcttcga 340 |||||||||| |||||||| || |||||||| |||||||||||||| | |||||||| | Sbjct: 2592 gcttcctgaatgaattggggttggtgtccatgagcctcttcctcatagcctcatcttcaa 2533 Query: 341 tgaatgtggtatttgcttcctcgtaaacccagttgtccacctgcccggatgttgcactcc 400 | ||||||| |||||| ||||| |||||||||||||| ||||| || ||||||||||||| Sbjct: 2532 taaatgtggcatttgcctcctcataaacccagttgtcaacctgtccagatgttgcactcc 2473 Query: 401 atccaacagtatttgtcagccgcttctcgatctctctaactccctcatagccactcttca 460 |||||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||| Sbjct: 2472 atccaacagtatttgtcagccgcttctcaatctctctaactccctcgtagccacttttca 2413 Query: 461 tcatcccctcataccacctagggttcagtagctttgtccttgcatcaagacgcaccgtct 520 |||||||||| |||||| ||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 2412 tcatcccctcgtaccacttagggttcagtagctttgtccttgcatcaaggcgcactgtct 2353 Query: 521 ccgacaatgtacgcacctgtgcatttgctgtggttgtgtctgctatgtacgaggaaggcg 580 | |||||||| | |||||||||||||||||||||||| ||||||||||| |||||||| | Sbjct: 2352 ctgacaatgtcctcacctgtgcatttgctgtggttgtatctgctatgtatgaggaaggtg 2293 Query: 581 cccgcccatccttccgcagcccttgcaccagcttcgtcgggtctgagtcgaagtagtggc 640 ||||||||||||| ||||| |||||||||||||| |||||||||||||| |||||||||| Sbjct: 2292 cccgcccatccttgcgcagtccttgcaccagctttgtcgggtctgagtcaaagtagtggc 2233 Query: 641 tgacatctgt 650 | |||||||| Sbjct: 2232 tcacatctgt 2223
>dbj|AK067323.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013106B16, full insert sequence Length = 4228 Score = 638 bits (322), Expect = e-180 Identities = 448/490 (91%) Strand = Plus / Minus Query: 161 accggtcaattccttcgatcttgtcttcaacctccgagtagagctccctgagcctttcca 220 |||||||||||||||| ||||||||||||||||| |||||||||||||||||| |||||| Sbjct: 3554 accggtcaattccttcaatcttgtcttcaacctcagagtagagctccctgagcttttcca 3495 Query: 221 agttatcctctgatgtctcccagtagcctctgccatttgcttctaggaaggtttgaagca 280 |||| |||||||||||||||||||||||||||||| | |||||||||||||| |||| | Sbjct: 3494 agttttcctctgatgtctcccagtagcctctgccactggcttctaggaaggtctgaacta 3435 Query: 281 gcttcctgaacgaattgggattagtgtccatcagcctcttcctcatctcttcatcttcga 340 |||||||||| |||||||| || |||||||| |||||||||||||| | |||||||| | Sbjct: 3434 gcttcctgaatgaattggggttggtgtccatgagcctcttcctcatagcctcatcttcaa 3375 Query: 341 tgaatgtggtatttgcttcctcgtaaacccagttgtccacctgcccggatgttgcactcc 400 | ||||||| |||||| ||||| |||||||||||||| ||||| || ||||||||||||| Sbjct: 3374 taaatgtggcatttgcctcctcataaacccagttgtcaacctgtccagatgttgcactcc 3315 Query: 401 atccaacagtatttgtcagccgcttctcgatctctctaactccctcatagccactcttca 460 |||||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||| Sbjct: 3314 atccaacagtatttgtcagccgcttctcaatctctctaactccctcgtagccacttttca 3255 Query: 461 tcatcccctcataccacctagggttcagtagctttgtccttgcatcaagacgcaccgtct 520 |||||||||| |||||| ||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 3254 tcatcccctcgtaccacttagggttcagtagctttgtccttgcatcaaggcgcactgtct 3195 Query: 521 ccgacaatgtacgcacctgtgcatttgctgtggttgtgtctgctatgtacgaggaaggcg 580 | |||||||| | |||||||||||||||||||||||| ||||||||||| |||||||| | Sbjct: 3194 ctgacaatgtcctcacctgtgcatttgctgtggttgtatctgctatgtatgaggaaggtg 3135 Query: 581 cccgcccatccttccgcagcccttgcaccagcttcgtcgggtctgagtcgaagtagtggc 640 ||||||||||||| ||||| |||||||||||||| |||||||||||||| |||||||||| Sbjct: 3134 cccgcccatccttgcgcagtccttgcaccagctttgtcgggtctgagtcaaagtagtggc 3075 Query: 641 tgacatctgt 650 | |||||||| Sbjct: 3074 tcacatctgt 3065
>dbj|AK065420.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013022D10, full insert sequence Length = 1814 Score = 638 bits (322), Expect = e-180 Identities = 448/490 (91%) Strand = Plus / Minus Query: 161 accggtcaattccttcgatcttgtcttcaacctccgagtagagctccctgagcctttcca 220 |||||||||||||||| ||||||||||||||||| |||||||||||||||||| |||||| Sbjct: 1175 accggtcaattccttcaatcttgtcttcaacctcagagtagagctccctgagcttttcca 1116 Query: 221 agttatcctctgatgtctcccagtagcctctgccatttgcttctaggaaggtttgaagca 280 |||| |||||||||||||||||||||||||||||| | |||||||||||||| |||| | Sbjct: 1115 agttttcctctgatgtctcccagtagcctctgccactggcttctaggaaggtctgaacta 1056 Query: 281 gcttcctgaacgaattgggattagtgtccatcagcctcttcctcatctcttcatcttcga 340 |||||||||| |||||||| || |||||||| |||||||||||||| | |||||||| | Sbjct: 1055 gcttcctgaatgaattggggttggtgtccatgagcctcttcctcatagcctcatcttcaa 996 Query: 341 tgaatgtggtatttgcttcctcgtaaacccagttgtccacctgcccggatgttgcactcc 400 | ||||||| |||||| ||||| |||||||||||||| ||||| || ||||||||||||| Sbjct: 995 taaatgtggcatttgcctcctcataaacccagttgtcaacctgtccagatgttgcactcc 936 Query: 401 atccaacagtatttgtcagccgcttctcgatctctctaactccctcatagccactcttca 460 |||||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||| Sbjct: 935 atccaacagtatttgtcagccgcttctcaatctctctaactccctcgtagccacttttca 876 Query: 461 tcatcccctcataccacctagggttcagtagctttgtccttgcatcaagacgcaccgtct 520 |||||||||| |||||| ||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 875 tcatcccctcgtaccacttagggttcagtagctttgtccttgcatcaaggcgcactgtct 816 Query: 521 ccgacaatgtacgcacctgtgcatttgctgtggttgtgtctgctatgtacgaggaaggcg 580 | |||||||| | |||||||||||||||||||||||| ||||||||||| |||||||| | Sbjct: 815 ctgacaatgtcctcacctgtgcatttgctgtggttgtatctgctatgtatgaggaaggtg 756 Query: 581 cccgcccatccttccgcagcccttgcaccagcttcgtcgggtctgagtcgaagtagtggc 640 ||||||||||||| ||||| |||||||||||||| |||||||||||||| |||||||||| Sbjct: 755 cccgcccatccttgcgcagtccttgcaccagctttgtcgggtctgagtcaaagtagtggc 696 Query: 641 tgacatctgt 650 | |||||||| Sbjct: 695 tcacatctgt 686
>dbj|AK062262.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-H04, full insert sequence Length = 1574 Score = 638 bits (322), Expect = e-180 Identities = 448/490 (91%) Strand = Plus / Minus Query: 161 accggtcaattccttcgatcttgtcttcaacctccgagtagagctccctgagcctttcca 220 |||||||||||||||| ||||||||||||||||| |||||||||||||||||| |||||| Sbjct: 1445 accggtcaattccttcaatcttgtcttcaacctcagagtagagctccctgagcttttcca 1386 Query: 221 agttatcctctgatgtctcccagtagcctctgccatttgcttctaggaaggtttgaagca 280 |||| |||||||||||||||||||||||||||||| | |||||||||||||| |||| | Sbjct: 1385 agttttcctctgatgtctcccagtagcctctgccactggcttctaggaaggtctgaacta 1326 Query: 281 gcttcctgaacgaattgggattagtgtccatcagcctcttcctcatctcttcatcttcga 340 |||||||||| |||||||| || |||||||| |||||||||||||| | |||||||| | Sbjct: 1325 gcttcctgaatgaattggggttggtgtccatgagcctcttcctcatagcctcatcttcaa 1266 Query: 341 tgaatgtggtatttgcttcctcgtaaacccagttgtccacctgcccggatgttgcactcc 400 | ||||||| |||||| ||||| |||||||||||||| ||||| || ||||||||||||| Sbjct: 1265 taaatgtggcatttgcctcctcataaacccagttgtcaacctgtccagatgttgcactcc 1206 Query: 401 atccaacagtatttgtcagccgcttctcgatctctctaactccctcatagccactcttca 460 |||||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||| Sbjct: 1205 atccaacagtatttgtcagccgcttctcaatctctctaactccctcgtagccacttttca 1146 Query: 461 tcatcccctcataccacctagggttcagtagctttgtccttgcatcaagacgcaccgtct 520 |||||||||| |||||| ||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 1145 tcatcccctcgtaccacttagggttcagtagctttgtccttgcatcaaggcgcactgtct 1086 Query: 521 ccgacaatgtacgcacctgtgcatttgctgtggttgtgtctgctatgtacgaggaaggcg 580 | |||||||| | |||||||||||||||||||||||| ||||||||||| |||||||| | Sbjct: 1085 ctgacaatgtcctcacctgtgcatttgctgtggttgtatctgctatgtatgaggaaggtg 1026 Query: 581 cccgcccatccttccgcagcccttgcaccagcttcgtcgggtctgagtcgaagtagtggc 640 ||||||||||||| ||||| |||||||||||||| |||||||||||||| |||||||||| Sbjct: 1025 cccgcccatccttgcgcagtccttgcaccagctttgtcgggtctgagtcaaagtagtggc 966 Query: 641 tgacatctgt 650 | |||||||| Sbjct: 965 tcacatctgt 956
>dbj|AK060612.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-F03, full insert sequence Length = 2563 Score = 638 bits (322), Expect = e-180 Identities = 448/490 (91%) Strand = Plus / Minus Query: 161 accggtcaattccttcgatcttgtcttcaacctccgagtagagctccctgagcctttcca 220 |||||||||||||||| ||||||||||||||||| |||||||||||||||||| |||||| Sbjct: 1841 accggtcaattccttcaatcttgtcttcaacctcagagtagagctccctgagcttttcca 1782 Query: 221 agttatcctctgatgtctcccagtagcctctgccatttgcttctaggaaggtttgaagca 280 |||| |||||||||||||||||||||||||||||| | |||||||||||||| |||| | Sbjct: 1781 agttttcctctgatgtctcccagtagcctctgccactggcttctaggaaggtctgaacta 1722 Query: 281 gcttcctgaacgaattgggattagtgtccatcagcctcttcctcatctcttcatcttcga 340 |||||||||| |||||||| || |||||||| |||||||||||||| | |||||||| | Sbjct: 1721 gcttcctgaatgaattggggttggtgtccatgagcctcttcctcatagcctcatcttcaa 1662 Query: 341 tgaatgtggtatttgcttcctcgtaaacccagttgtccacctgcccggatgttgcactcc 400 | ||||||| |||||| ||||| |||||||||||||| ||||| || ||||||||||||| Sbjct: 1661 taaatgtggcatttgcctcctcataaacccagttgtcaacctgtccagatgttgcactcc 1602 Query: 401 atccaacagtatttgtcagccgcttctcgatctctctaactccctcatagccactcttca 460 |||||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||| Sbjct: 1601 atccaacagtatttgtcagccgcttctcaatctctctaactccctcgtagccacttttca 1542 Query: 461 tcatcccctcataccacctagggttcagtagctttgtccttgcatcaagacgcaccgtct 520 |||||||||| |||||| ||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 1541 tcatcccctcgtaccacttagggttcagtagctttgtccttgcatcaaggcgcactgtct 1482 Query: 521 ccgacaatgtacgcacctgtgcatttgctgtggttgtgtctgctatgtacgaggaaggcg 580 | |||||||| | |||||||||||||||||||||||| ||||||||||| |||||||| | Sbjct: 1481 ctgacaatgtcctcacctgtgcatttgctgtggttgtatctgctatgtatgaggaaggtg 1422 Query: 581 cccgcccatccttccgcagcccttgcaccagcttcgtcgggtctgagtcgaagtagtggc 640 ||||||||||||| ||||| |||||||||||||| |||||||||||||| |||||||||| Sbjct: 1421 cccgcccatccttgcgcagtccttgcaccagctttgtcgggtctgagtcaaagtagtggc 1362 Query: 641 tgacatctgt 650 | |||||||| Sbjct: 1361 tcacatctgt 1352
>ref|XM_479395.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2855 Score = 567 bits (286), Expect = e-158 Identities = 439/490 (89%) Strand = Plus / Minus Query: 161 accggtcaattccttcgatcttgtcttcaacctccgagtagagctccctgagcctttcca 220 |||||||||||||||| ||||||||||||||||| |||||||||||||||||| |||||| Sbjct: 2665 accggtcaattccttcaatcttgtcttcaacctcagagtagagctccctgagcttttcca 2606 Query: 221 agttatcctctgatgtctcccagtagcctctgccatttgcttctaggaaggtttgaagca 280 |||| ||||||||||| ||||| |||||||| ||| | ||||||||| |||| |||| | Sbjct: 2605 agttttcctctgatgtttcccattagcctctaccactggcttctaggcaggtctgaacta 2546 Query: 281 gcttcctgaacgaattgggattagtgtccatcagcctcttcctcatctcttcatcttcga 340 |||||||||| |||||||| ||||||||||| |||||||||||||| | |||||||| | Sbjct: 2545 gcttcctgaatgaattggggttagtgtccatgagcctcttcctcatagcctcatcttcaa 2486 Query: 341 tgaatgtggtatttgcttcctcgtaaacccagttgtccacctgcccggatgttgcactcc 400 | ||||||| |||||| ||||| |||||||||||| | ||||| || ||| ||||||||| Sbjct: 2485 taaatgtggcatttgcctcctcataaacccagttgacaacctgtccagattttgcactcc 2426 Query: 401 atccaacagtatttgtcagccgcttctcgatctctctaactccctcatagccactcttca 460 || ||||||| ||||||||||||||||| ||||||||||||||||| |||||||| |||| Sbjct: 2425 atacaacagtttttgtcagccgcttctcaatctctctaactccctcgtagccacttttca 2366 Query: 461 tcatcccctcataccacctagggttcagtagctttgtccttgcatcaagacgcaccgtct 520 ||||||||| |||||| ||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 2365 tcatccccttgtaccacttagggttcagtagctttgtccttgcatcaaggcgcactgtct 2306 Query: 521 ccgacaatgtacgcacctgtgcatttgctgtggttgtgtctgctatgtacgaggaaggcg 580 | |||||||| | |||||||||||||||||||||||| ||||||||||| |||||||| | Sbjct: 2305 ctgacaatgtcctcacctgtgcatttgctgtggttgtatctgctatgtatgaggaaggtg 2246 Query: 581 cccgcccatccttccgcagcccttgcaccagcttcgtcgggtctgagtcgaagtagtggc 640 ||||| ||||||| ||||| |||||||||||||| |||||||||||||| |||||||||| Sbjct: 2245 cccgctcatccttgcgcagtccttgcaccagctttgtcgggtctgagtcaaagtagtggc 2186 Query: 641 tgacatctgt 650 | |||||||| Sbjct: 2185 tcacatctgt 2176
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 567 bits (286), Expect = e-158 Identities = 439/490 (89%) Strand = Plus / Plus Query: 161 accggtcaattccttcgatcttgtcttcaacctccgagtagagctccctgagcctttcca 220 |||||||||||||||| ||||||||||||||||| |||||||||||||||||| |||||| Sbjct: 27570523 accggtcaattccttcaatcttgtcttcaacctcagagtagagctccctgagcttttcca 27570582 Query: 221 agttatcctctgatgtctcccagtagcctctgccatttgcttctaggaaggtttgaagca 280 |||| ||||||||||| ||||| |||||||| ||| | ||||||||| |||| |||| | Sbjct: 27570583 agttttcctctgatgtttcccattagcctctaccactggcttctaggcaggtctgaacta 27570642 Query: 281 gcttcctgaacgaattgggattagtgtccatcagcctcttcctcatctcttcatcttcga 340 |||||||||| |||||||| ||||||||||| |||||||||||||| | |||||||| | Sbjct: 27570643 gcttcctgaatgaattggggttagtgtccatgagcctcttcctcatagcctcatcttcaa 27570702 Query: 341 tgaatgtggtatttgcttcctcgtaaacccagttgtccacctgcccggatgttgcactcc 400 | ||||||| |||||| ||||| |||||||||||| | ||||| || ||| ||||||||| Sbjct: 27570703 taaatgtggcatttgcctcctcataaacccagttgacaacctgtccagattttgcactcc 27570762 Query: 401 atccaacagtatttgtcagccgcttctcgatctctctaactccctcatagccactcttca 460 || ||||||| ||||||||||||||||| ||||||||||||||||| |||||||| |||| Sbjct: 27570763 atacaacagtttttgtcagccgcttctcaatctctctaactccctcgtagccacttttca 27570822 Query: 461 tcatcccctcataccacctagggttcagtagctttgtccttgcatcaagacgcaccgtct 520 ||||||||| |||||| ||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 27570823 tcatccccttgtaccacttagggttcagtagctttgtccttgcatcaaggcgcactgtct 27570882 Query: 521 ccgacaatgtacgcacctgtgcatttgctgtggttgtgtctgctatgtacgaggaaggcg 580 | |||||||| | |||||||||||||||||||||||| ||||||||||| |||||||| | Sbjct: 27570883 ctgacaatgtcctcacctgtgcatttgctgtggttgtatctgctatgtatgaggaaggtg 27570942 Query: 581 cccgcccatccttccgcagcccttgcaccagcttcgtcgggtctgagtcgaagtagtggc 640 ||||| ||||||| ||||| |||||||||||||| |||||||||||||| |||||||||| Sbjct: 27570943 cccgctcatccttgcgcagtccttgcaccagctttgtcgggtctgagtcaaagtagtggc 27571002 Query: 641 tgacatctgt 650 | |||||||| Sbjct: 27571003 tcacatctgt 27571012
>dbj|AP005184.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0047B07 Length = 157797 Score = 567 bits (286), Expect = e-158 Identities = 439/490 (89%) Strand = Plus / Plus Query: 161 accggtcaattccttcgatcttgtcttcaacctccgagtagagctccctgagcctttcca 220 |||||||||||||||| ||||||||||||||||| |||||||||||||||||| |||||| Sbjct: 27516 accggtcaattccttcaatcttgtcttcaacctcagagtagagctccctgagcttttcca 27575 Query: 221 agttatcctctgatgtctcccagtagcctctgccatttgcttctaggaaggtttgaagca 280 |||| ||||||||||| ||||| |||||||| ||| | ||||||||| |||| |||| | Sbjct: 27576 agttttcctctgatgtttcccattagcctctaccactggcttctaggcaggtctgaacta 27635 Query: 281 gcttcctgaacgaattgggattagtgtccatcagcctcttcctcatctcttcatcttcga 340 |||||||||| |||||||| ||||||||||| |||||||||||||| | |||||||| | Sbjct: 27636 gcttcctgaatgaattggggttagtgtccatgagcctcttcctcatagcctcatcttcaa 27695 Query: 341 tgaatgtggtatttgcttcctcgtaaacccagttgtccacctgcccggatgttgcactcc 400 | ||||||| |||||| ||||| |||||||||||| | ||||| || ||| ||||||||| Sbjct: 27696 taaatgtggcatttgcctcctcataaacccagttgacaacctgtccagattttgcactcc 27755 Query: 401 atccaacagtatttgtcagccgcttctcgatctctctaactccctcatagccactcttca 460 || ||||||| ||||||||||||||||| ||||||||||||||||| |||||||| |||| Sbjct: 27756 atacaacagtttttgtcagccgcttctcaatctctctaactccctcgtagccacttttca 27815 Query: 461 tcatcccctcataccacctagggttcagtagctttgtccttgcatcaagacgcaccgtct 520 ||||||||| |||||| ||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 27816 tcatccccttgtaccacttagggttcagtagctttgtccttgcatcaaggcgcactgtct 27875 Query: 521 ccgacaatgtacgcacctgtgcatttgctgtggttgtgtctgctatgtacgaggaaggcg 580 | |||||||| | |||||||||||||||||||||||| ||||||||||| |||||||| | Sbjct: 27876 ctgacaatgtcctcacctgtgcatttgctgtggttgtatctgctatgtatgaggaaggtg 27935 Query: 581 cccgcccatccttccgcagcccttgcaccagcttcgtcgggtctgagtcgaagtagtggc 640 ||||| ||||||| ||||| |||||||||||||| |||||||||||||| |||||||||| Sbjct: 27936 cccgctcatccttgcgcagtccttgcaccagctttgtcgggtctgagtcaaagtagtggc 27995 Query: 641 tgacatctgt 650 | |||||||| Sbjct: 27996 tcacatctgt 28005
>dbj|AP005182.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0018C07 Length = 141707 Score = 567 bits (286), Expect = e-158 Identities = 439/490 (89%) Strand = Plus / Plus Query: 161 accggtcaattccttcgatcttgtcttcaacctccgagtagagctccctgagcctttcca 220 |||||||||||||||| ||||||||||||||||| |||||||||||||||||| |||||| Sbjct: 134494 accggtcaattccttcaatcttgtcttcaacctcagagtagagctccctgagcttttcca 134553 Query: 221 agttatcctctgatgtctcccagtagcctctgccatttgcttctaggaaggtttgaagca 280 |||| ||||||||||| ||||| |||||||| ||| | ||||||||| |||| |||| | Sbjct: 134554 agttttcctctgatgtttcccattagcctctaccactggcttctaggcaggtctgaacta 134613 Query: 281 gcttcctgaacgaattgggattagtgtccatcagcctcttcctcatctcttcatcttcga 340 |||||||||| |||||||| ||||||||||| |||||||||||||| | |||||||| | Sbjct: 134614 gcttcctgaatgaattggggttagtgtccatgagcctcttcctcatagcctcatcttcaa 134673 Query: 341 tgaatgtggtatttgcttcctcgtaaacccagttgtccacctgcccggatgttgcactcc 400 | ||||||| |||||| ||||| |||||||||||| | ||||| || ||| ||||||||| Sbjct: 134674 taaatgtggcatttgcctcctcataaacccagttgacaacctgtccagattttgcactcc 134733 Query: 401 atccaacagtatttgtcagccgcttctcgatctctctaactccctcatagccactcttca 460 || ||||||| ||||||||||||||||| ||||||||||||||||| |||||||| |||| Sbjct: 134734 atacaacagtttttgtcagccgcttctcaatctctctaactccctcgtagccacttttca 134793 Query: 461 tcatcccctcataccacctagggttcagtagctttgtccttgcatcaagacgcaccgtct 520 ||||||||| |||||| ||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 134794 tcatccccttgtaccacttagggttcagtagctttgtccttgcatcaaggcgcactgtct 134853 Query: 521 ccgacaatgtacgcacctgtgcatttgctgtggttgtgtctgctatgtacgaggaaggcg 580 | |||||||| | |||||||||||||||||||||||| ||||||||||| |||||||| | Sbjct: 134854 ctgacaatgtcctcacctgtgcatttgctgtggttgtatctgctatgtatgaggaaggtg 134913 Query: 581 cccgcccatccttccgcagcccttgcaccagcttcgtcgggtctgagtcgaagtagtggc 640 ||||| ||||||| ||||| |||||||||||||| |||||||||||||| |||||||||| Sbjct: 134914 cccgctcatccttgcgcagtccttgcaccagctttgtcgggtctgagtcaaagtagtggc 134973 Query: 641 tgacatctgt 650 | |||||||| Sbjct: 134974 tcacatctgt 134983
>gb|AY109455.1| Zea mays CL592_1 mRNA sequence Length = 4066 Score = 353 bits (178), Expect = 5e-94 Identities = 401/477 (84%) Strand = Plus / Minus Query: 165 gtcaattccttcgatcttgtcttcaacctccgagtagagctccctgagcctttccaagtt 224 |||||| || || |||||||||||||||||||| ||||||||||||||||| |||| ||| Sbjct: 3882 gtcaatcccctcaatcttgtcttcaacctccgaatagagctccctgagcctgtccaggtt 3823 Query: 225 atcctctgatgtctcccagtagcctctgccatttgcttctaggaaggtttgaagcagctt 284 ||||| | |||||||||||||||||||||| | ||||| |||||||| || | || ||| Sbjct: 3822 ctcctccgttgtctcccagtagcctctgccactggcttccaggaaggtctgcaccaactt 3763 Query: 285 cctgaacgaattgggattagtgtccatcagcctcttcctcatctcttcatcttcgatgaa 344 ||||||||||||||| || |||||||| ||||||||||||||| | || || |||||||| Sbjct: 3762 cctgaacgaattggggttggtgtccatgagcctcttcctcatcgcctcgtcctcgatgaa 3703 Query: 345 tgtggtatttgcttcctcgtaaacccagttgtccacctgcccggatgttgcactccatcc 404 |||| || || |||||||| ||||||||||| |||||||| || || || ||||| || Sbjct: 3702 cgtggagttggcctcctcgtagacccagttgtcgacctgcccagacgtggcgctccaccc 3643 Query: 405 aacagtatttgtcagccgcttctcgatctctctaactccctcatagccactcttcatcat 464 || || || || ||||||||||||||||| || | || || || ||||||||||| Sbjct: 3642 gacggtgttggtgagccgcttctcgatctccctgannnnntcgtacccgctcttcatcat 3583 Query: 465 cccctcataccacctagggttcagtagctttgtccttgcatcaagacgcaccgtctccga 524 |||||| |||||| | |||||||| ||||| ||||| || || || |||||||||||||| Sbjct: 3582 cccctcgtaccacttggggttcagcagcttggtcctcgcgtcgaggcgcaccgtctccga 3523 Query: 525 caatgtacgcacctgtgcatttgctgtggttgtgtctgctatgtacgaggaaggcgcccg 584 || || | |||||| || || || ||||| ||||| |||||||||||||| |||||||| Sbjct: 3522 cagcgtcctcacctgggcgttcgccgtggtggtgtcggctatgtacgaggacggcgcccg 3463 Query: 585 cccatccttccgcagcccttgcaccagcttcgtcgggtctgagtcgaagtagtggct 641 ||| ||||| |||||||| ||||| ||||| |||||||| ||||||||||||||||| Sbjct: 3462 cccgtccttgcgcagcccctgcacgagcttggtcgggtccgagtcgaagtagtggct 3406
>gb|AF457973.1| Zea mays clone cs1.pk0080.d12, mRNA sequence Length = 218 Score = 147 bits (74), Expect = 5e-32 Identities = 169/201 (84%) Strand = Plus / Minus Query: 234 tgtctcccagtagcctctgccatttgcttctaggaaggtttgaagcagcttcctgaacga 293 |||||||||||||||||||| | | ||||| |||||||| || | || |||||||||||| Sbjct: 203 tgtctcccagtagcctctgcnactggcttccaggaaggtctgcaccaacttcctgaacga 144 Query: 294 attgggattagtgtccatcagcctcttcctcatctcttcatcttcgatgaatgtggtatt 353 |||||| || |||||||| ||||||||||||||| | || || |||||||| |||| || Sbjct: 143 attggggttggtgtccatgagcctcttcctcatcgcctcgtcctcgatgaacgtggagtt 84 Query: 354 tgcttcctcgtaaacccagttgtccacctgcccggatgttgcactccatccaacagtatt 413 || |||||||| ||||||||||| |||||||| || || || ||||| || || || || Sbjct: 83 ggcctcctcgtagacccagttgtcgacctgcccagacgtggcgctccacccgacggtgtt 24 Query: 414 tgtcagccgcttctcgatctc 434 || ||||||||||||||||| Sbjct: 23 ggtgagccgcttctcgatctc 3
>emb|X73144.1|AMPIX A.majus gene for protoporphyrin IX: Mg Chelatase, subunit Length = 5071 Score = 117 bits (59), Expect = 5e-23 Identities = 194/239 (81%) Strand = Plus / Minus Query: 331 tcatcttcgatgaatgtggtatttgcttcctcgtaaacccagttgtccacctgcccggat 390 |||||||||||||| || |||||||| || || || ||||| || || || || || || Sbjct: 4668 tcatcttcgatgaaagtagtatttgcctcttcatacacccaattatcgacttgtcctgaa 4609 Query: 391 gttgcactccatccaacagtatttgtcagccgcttctcgatctctctaactccctcatag 450 ||||||||||| ||||| || || |||||||||||||| ||||| | ||||||||| || Sbjct: 4608 gttgcactccagccaacggtgttagtcagccgcttctcaatctcacgaactccctcgtac 4549 Query: 451 ccactcttcatcatcccctcataccacctagggttcagtagctttgtccttgcatcaaga 510 ||||| || ||| || || ||||| | || ||||| | ||| || ||||| |||||| Sbjct: 4548 ccacttgacagcatgccttcgtaccattttggattcagcaacttggttcttgcgtcaaga 4489 Query: 511 cgcaccgtctccgacaatgtacgcacctgtgcatttgctgtggttgtgtctgctatgta 569 || |||||||| ||||||||||| ||||||| ||| |||||||||||||| || ||||| Sbjct: 4488 cggaccgtctcagacaatgtacgtacctgtgaattagctgtggttgtgtcagcaatgta 4430
>gb|DQ073919.1| Capsicum annuum magnesium chelatase mRNA, partial cds Length = 714 Score = 109 bits (55), Expect = 1e-20 Identities = 211/263 (80%) Strand = Plus / Minus Query: 283 ttcctgaacgaattgggattagtgtccatcagcctcttcctcatctcttcatcttcgatg 342 |||||||| ||||| ||||| |||| ||| ||||| ||| |||||| ||||||| |||| Sbjct: 538 ttcctgaaagaatttggatttgtgttcatgagcctgttcaacatctcctcatctttgatg 479 Query: 343 aatgtggtatttgcttcctcgtaaacccagttgtccacctgcccggatgttgcactccat 402 || || || |||||||| || || ||||| ||||| || || || || |||||||||||| Sbjct: 478 aaggttgtgtttgcttcttcatacacccaattgtcaacttgtcctgaagttgcactccat 419 Query: 403 ccaacagtatttgtcagccgcttctcgatctctctaactccctcatagccactcttcatc 462 || || || || || | || ||||| ||||| | ||||||||| |||||| | || | Sbjct: 418 cccactgtgttggttaatcgtttctcaatctcacgaactccctcgtagccagtggacagc 359 Query: 463 atcccctcataccacctagggttcagtagctttgtccttgcatcaagacgcaccgtctcc 522 || || ||||||||| | ||||||| ||||||||||||||||| || | ||| ||||| Sbjct: 358 atgccttcataccacttggggttcaacagctttgtccttgcatctagtctcacagtctca 299 Query: 523 gacaatgtacgcacctgtgcatt 545 ||||||||||| ||||| ||||| Sbjct: 298 gacaatgtacgtacctgagcatt 276 Score = 40.1 bits (20), Expect = 9.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 169 attccttcgatcttgtcttcaacctccgagta 200 |||||||| |||||||||||||| || ||||| Sbjct: 616 attccttcaatcttgtcttcaacttctgagta 647 Score = 40.1 bits (20), Expect = 9.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 619 gggtctgagtcgaagtagtggctgacatctgt 650 |||||||| ||||||||||| || |||||||| Sbjct: 202 gggtctgaatcgaagtagtgactaacatctgt 171
>gb|DQ376081.1| Vicia faba magnesium chelatase subunit H (CHLH) mRNA, partial sequence Length = 3449 Score = 101 bits (51), Expect = 3e-18 Identities = 219/275 (79%) Strand = Plus / Minus Query: 280 agcttcctgaacgaattgggattagtgtccatcagcctcttcctcatctcttcatcttcg 339 |||||||| || || |||||||| ||| ||||||| ||||| ||| |||||||||| Sbjct: 3062 agcttcctaaaggagttgggatttgtgctcatcagcttcttcaacatttcttcatcttga 3003 Query: 340 atgaatgtggtatttgcttcctcgtaaacccagttgtccacctgcccggatgttgcactc 399 |||||||| || || ||||| || || ||||||||||| || || || || ||||||||| Sbjct: 3002 atgaatgttgtgttggcttcttcatacacccagttgtcaacttgtccagacgttgcactc 2943 Query: 400 catccaacagtatttgtcagccgcttctcgatctctctaactccctcatagccactcttc 459 |||||||| || || || |||| |||||||||||| | ||| || || || ||||| Sbjct: 2942 catccaactgtgttggtaagcctcttctcgatctcacgaacaccttcgtaaccacttgat 2883 Query: 460 atcatcccctcataccacctagggttcagtagctttgtccttgcatcaagacgcaccgtc 519 | ||| || ||||||||| | ||||||| |||||| || ||||||||||| || || ||| Sbjct: 2882 aacatgccttcataccactttgggttcaatagcttggttcttgcatcaagtcgaactgtc 2823 Query: 520 tccgacaatgtacgcacctgtgcatttgctgtggt 554 || || | ||||||||||| ||||| || ||||| Sbjct: 2822 tcggatagggtacgcacctgggcattagccgtggt 2788
>gb|AF026399.1|AF026399 Onobrychis viciifolia magnesium protoporphyrin IX chelatase mRNA, partial cds Length = 562 Score = 71.9 bits (36), Expect = 3e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 481 gggttcagtagctttgtccttgcatcaagacgcaccgtctccgacaatgtacgcacctgt 540 ||||||| ||||| ||||||||||||||||| |||||||| || | || || |||||| Sbjct: 524 gggttcaaaagcttcgtccttgcatcaagacgaaccgtctcagaaagggtgcgtacctgt 465 Query: 541 gcatttgctgtggttgtgtc 560 ||||| |||||||||||||| Sbjct: 464 gcattagctgtggttgtgtc 445
>ref|NM_121366.3| Arabidopsis thaliana GUN5 (GENOMES UNCOUPLED 5) AT5G13630 (GUN5) mRNA, complete cds Length = 4524 Score = 63.9 bits (32), Expect = 6e-07 Identities = 257/332 (77%) Strand = Plus / Minus Query: 172 ccttcgatcttgtcttcaacctccgagtagagctccctgagcctttccaagttatcctct 231 ||||||||||||||||| |||| |||||| | ||| ||||| | || | ||| || | Sbjct: 4278 ccttcgatcttgtcttccacctgcgagtacaattccttgagcttctctatgttttcagcg 4219 Query: 232 gatgtctcccagtagcctctgccatttgcttctaggaaggtttgaagcagcttcctgaac 291 || || ||||||||||| | ||||| || || | ||| || ||||||| |||||||| Sbjct: 4218 gaagtgtcccagtagccacgaccattggcctccaagaaagtctgaagcattttcctgaag 4159 Query: 292 gaattgggattagtgtccatcagcctcttcctcatctcttcatcttcgatgaatgtggta 351 || |||||||| |||| ||| || | ||| |||||| || |||| |||||| || | Sbjct: 4158 gagttgggattggtgttcatgagacggttcagcatctcctcgtcttggatgaaagttgag 4099 Query: 352 tttgcttcctcgtaaacccagttgtccacctgcccggatgttgcactccatccaacagta 411 || || |||||||| ||||| ||||| || || || || |||||||||||||| ||||| Sbjct: 4098 ttggcctcctcgtagacccaattgtctacttgacctgacgttgcactccatcccacagtg 4039 Query: 412 tttgtcagccgcttctcgatctctctaactccctcatagccactcttcatcatcccctca 471 || | ||| | |||||| ||||| | |||||| ||||| ||||| |||||| || || Sbjct: 4038 ttggacagtctcttctctatctcacgaactccttcatatccacttgacatcattccttcg 3979 Query: 472 taccacctagggttcagtagctttgtccttgc 503 |||||| | || ||||| |||||||| ||||| Sbjct: 3978 taccactttggattcagcagctttgttcttgc 3947
>emb|AL391710.1|ATT6I14 Arabidopsis thaliana DNA chromosome 5, BAC clone T6I14 (ESSA project) Length = 90472 Score = 63.9 bits (32), Expect = 6e-07 Identities = 257/332 (77%) Strand = Plus / Plus Query: 172 ccttcgatcttgtcttcaacctccgagtagagctccctgagcctttccaagttatcctct 231 ||||||||||||||||| |||| |||||| | ||| ||||| | || | ||| || | Sbjct: 70044 ccttcgatcttgtcttccacctgcgagtacaattccttgagcttctctatgttttcagcg 70103 Query: 232 gatgtctcccagtagcctctgccatttgcttctaggaaggtttgaagcagcttcctgaac 291 || || ||||||||||| | ||||| || || | ||| || ||||||| |||||||| Sbjct: 70104 gaagtgtcccagtagccacgaccattggcctccaagaaagtctgaagcattttcctgaag 70163 Query: 292 gaattgggattagtgtccatcagcctcttcctcatctcttcatcttcgatgaatgtggta 351 || |||||||| |||| ||| || | ||| |||||| || |||| |||||| || | Sbjct: 70164 gagttgggattggtgttcatgagacggttcagcatctcctcgtcttggatgaaagttgag 70223 Query: 352 tttgcttcctcgtaaacccagttgtccacctgcccggatgttgcactccatccaacagta 411 || || |||||||| ||||| ||||| || || || || |||||||||||||| ||||| Sbjct: 70224 ttggcctcctcgtagacccaattgtctacttgacctgacgttgcactccatcccacagtg 70283 Query: 412 tttgtcagccgcttctcgatctctctaactccctcatagccactcttcatcatcccctca 471 || | ||| | |||||| ||||| | |||||| ||||| ||||| |||||| || || Sbjct: 70284 ttggacagtctcttctctatctcacgaactccttcatatccacttgacatcattccttcg 70343 Query: 472 taccacctagggttcagtagctttgtccttgc 503 |||||| | || ||||| |||||||| ||||| Sbjct: 70344 taccactttggattcagcagctttgttcttgc 70375
>gb|AY078971.1| Arabidopsis thaliana AT5g13630/MSH12_9 mRNA, complete cds Length = 4363 Score = 63.9 bits (32), Expect = 6e-07 Identities = 257/332 (77%) Strand = Plus / Minus Query: 172 ccttcgatcttgtcttcaacctccgagtagagctccctgagcctttccaagttatcctct 231 ||||||||||||||||| |||| |||||| | ||| ||||| | || | ||| || | Sbjct: 4278 ccttcgatcttgtcttccacctgcgagtacaattccttgagcttctctatgttttcagcg 4219 Query: 232 gatgtctcccagtagcctctgccatttgcttctaggaaggtttgaagcagcttcctgaac 291 || || ||||||||||| | ||||| || || | ||| || ||||||| |||||||| Sbjct: 4218 gaagtgtcccagtagccacgaccattggcctccaagaaagtctgaagcattttcctgaag 4159 Query: 292 gaattgggattagtgtccatcagcctcttcctcatctcttcatcttcgatgaatgtggta 351 || |||||||| |||| ||| || | ||| |||||| || |||| |||||| || | Sbjct: 4158 gagttgggattggtgttcatgagacggttcagcatctcctcgtcttggatgaaagttgag 4099 Query: 352 tttgcttcctcgtaaacccagttgtccacctgcccggatgttgcactccatccaacagta 411 || || |||||||| ||||| ||||| || || || || |||||||||||||| ||||| Sbjct: 4098 ttggcctcctcgtagacccaattgtctacttgacctgacgttgcactccatcccacagtg 4039 Query: 412 tttgtcagccgcttctcgatctctctaactccctcatagccactcttcatcatcccctca 471 || | ||| | |||||| ||||| | |||||| ||||| ||||| |||||| || || Sbjct: 4038 ttggacagtctcttctctatctcacgaactccttcatatccacttgacatcattccttcg 3979 Query: 472 taccacctagggttcagtagctttgtccttgc 503 |||||| | || ||||| |||||||| ||||| Sbjct: 3978 taccactttggattcagcagctttgttcttgc 3947
>gb|AY070133.1| Arabidopsis thaliana AT5g13630/MSH12_9 mRNA, complete cds Length = 4267 Score = 63.9 bits (32), Expect = 6e-07 Identities = 257/332 (77%) Strand = Plus / Minus Query: 172 ccttcgatcttgtcttcaacctccgagtagagctccctgagcctttccaagttatcctct 231 ||||||||||||||||| |||| |||||| | ||| ||||| | || | ||| || | Sbjct: 4198 ccttcgatcttgtcttccacctgcgagtacaattccttgagcttctctatgttttcagcg 4139 Query: 232 gatgtctcccagtagcctctgccatttgcttctaggaaggtttgaagcagcttcctgaac 291 || || ||||||||||| | ||||| || || | ||| || ||||||| |||||||| Sbjct: 4138 gaagtgtcccagtagccacgaccattggcctccaagaaagtctgaagcattttcctgaag 4079 Query: 292 gaattgggattagtgtccatcagcctcttcctcatctcttcatcttcgatgaatgtggta 351 || |||||||| |||| ||| || | ||| |||||| || |||| |||||| || | Sbjct: 4078 gagttgggattggtgttcatgagacggttcagcatctcctcgtcttggatgaaagttgag 4019 Query: 352 tttgcttcctcgtaaacccagttgtccacctgcccggatgttgcactccatccaacagta 411 || || |||||||| ||||| ||||| || || || || |||||||||||||| ||||| Sbjct: 4018 ttggcctcctcgtagacccaattgtctacttgacctgacgttgcactccatcccacagtg 3959 Query: 412 tttgtcagccgcttctcgatctctctaactccctcatagccactcttcatcatcccctca 471 || | ||| | |||||| ||||| | |||||| ||||| ||||| |||||| || || Sbjct: 3958 ttggacagtctcttctctatctcacgaactccttcatatccacttgacatcattccttcg 3899 Query: 472 taccacctagggttcagtagctttgtccttgc 503 |||||| | || ||||| |||||||| ||||| Sbjct: 3898 taccactttggattcagcagctttgttcttgc 3867
>gb|BT002311.1| Arabidopsis thaliana At5g13630/MSH12_9 mRNA, complete cds Length = 4146 Score = 63.9 bits (32), Expect = 6e-07 Identities = 257/332 (77%) Strand = Plus / Minus Query: 172 ccttcgatcttgtcttcaacctccgagtagagctccctgagcctttccaagttatcctct 231 ||||||||||||||||| |||| |||||| | ||| ||||| | || | ||| || | Sbjct: 4133 ccttcgatcttgtcttccacctgcgagtacaattccttgagcttctctatgttttcagcg 4074 Query: 232 gatgtctcccagtagcctctgccatttgcttctaggaaggtttgaagcagcttcctgaac 291 || || ||||||||||| | ||||| || || | ||| || ||||||| |||||||| Sbjct: 4073 gaagtgtcccagtagccacgaccattggcctccaagaaagtctgaagcattttcctgaag 4014 Query: 292 gaattgggattagtgtccatcagcctcttcctcatctcttcatcttcgatgaatgtggta 351 || |||||||| |||| ||| || | ||| |||||| || |||| |||||| || | Sbjct: 4013 gagttgggattggtgttcatgagacggttcagcatctcctcgtcttggatgaaagttgag 3954 Query: 352 tttgcttcctcgtaaacccagttgtccacctgcccggatgttgcactccatccaacagta 411 || || |||||||| ||||| ||||| || || || || |||||||||||||| ||||| Sbjct: 3953 ttggcctcctcgtagacccaattgtctacttgacctgacgttgcactccatcccacagtg 3894 Query: 412 tttgtcagccgcttctcgatctctctaactccctcatagccactcttcatcatcccctca 471 || | ||| | |||||| ||||| | |||||| ||||| ||||| |||||| || || Sbjct: 3893 ttggacagtctcttctctatctcacgaactccttcatatccacttgacatcattccttcg 3834 Query: 472 taccacctagggttcagtagctttgtccttgc 503 |||||| | || ||||| |||||||| ||||| Sbjct: 3833 taccactttggattcagcagctttgttcttgc 3802
>dbj|AB006704.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MSH12 Length = 79259 Score = 63.9 bits (32), Expect = 6e-07 Identities = 257/332 (77%) Strand = Plus / Plus Query: 172 ccttcgatcttgtcttcaacctccgagtagagctccctgagcctttccaagttatcctct 231 ||||||||||||||||| |||| |||||| | ||| ||||| | || | ||| || | Sbjct: 30786 ccttcgatcttgtcttccacctgcgagtacaattccttgagcttctctatgttttcagcg 30845 Query: 232 gatgtctcccagtagcctctgccatttgcttctaggaaggtttgaagcagcttcctgaac 291 || || ||||||||||| | ||||| || || | ||| || ||||||| |||||||| Sbjct: 30846 gaagtgtcccagtagccacgaccattggcctccaagaaagtctgaagcattttcctgaag 30905 Query: 292 gaattgggattagtgtccatcagcctcttcctcatctcttcatcttcgatgaatgtggta 351 || |||||||| |||| ||| || | ||| |||||| || |||| |||||| || | Sbjct: 30906 gagttgggattggtgttcatgagacggttcagcatctcctcgtcttggatgaaagttgag 30965 Query: 352 tttgcttcctcgtaaacccagttgtccacctgcccggatgttgcactccatccaacagta 411 || || |||||||| ||||| ||||| || || || || |||||||||||||| ||||| Sbjct: 30966 ttggcctcctcgtagacccaattgtctacttgacctgacgttgcactccatcccacagtg 31025 Query: 412 tttgtcagccgcttctcgatctctctaactccctcatagccactcttcatcatcccctca 471 || | ||| | |||||| ||||| | |||||| ||||| ||||| |||||| || || Sbjct: 31026 ttggacagtctcttctctatctcacgaactccttcatatccacttgacatcattccttcg 31085 Query: 472 taccacctagggttcagtagctttgtccttgc 503 |||||| | || ||||| |||||||| ||||| Sbjct: 31086 taccactttggattcagcagctttgttcttgc 31117
>emb|Z68495.1|ATCHLH A.thaliana CHLH gene Length = 4428 Score = 63.9 bits (32), Expect = 6e-07 Identities = 257/332 (77%) Strand = Plus / Minus Query: 172 ccttcgatcttgtcttcaacctccgagtagagctccctgagcctttccaagttatcctct 231 ||||||||||||||||| |||| |||||| | ||| ||||| | || | ||| || | Sbjct: 4270 ccttcgatcttgtcttccacctgcgagtacaattccttgagcttctctatgttttcagcg 4211 Query: 232 gatgtctcccagtagcctctgccatttgcttctaggaaggtttgaagcagcttcctgaac 291 || || ||||||||||| | ||||| || || | ||| || ||||||| |||||||| Sbjct: 4210 gaagtgtcccagtagccacgaccattggcctccaagaaagtctgaagcattttcctgaag 4151 Query: 292 gaattgggattagtgtccatcagcctcttcctcatctcttcatcttcgatgaatgtggta 351 || |||||||| |||| ||| || | ||| |||||| || |||| |||||| || | Sbjct: 4150 gagttgggattggtgttcatgagacggttcagcatctcctcgtcttggatgaaagttgag 4091 Query: 352 tttgcttcctcgtaaacccagttgtccacctgcccggatgttgcactccatccaacagta 411 || || |||||||| ||||| ||||| || || || || |||||||||||||| ||||| Sbjct: 4090 ttggcctcctcgtagacccaattgtctacttgacctgacgttgcactccatcccacagtg 4031 Query: 412 tttgtcagccgcttctcgatctctctaactccctcatagccactcttcatcatcccctca 471 || | ||| | |||||| ||||| | |||||| ||||| ||||| |||||| || || Sbjct: 4030 ttggacagtctcttctctatctcacgaactccttcatatccacttgacatcattccttcg 3971 Query: 472 taccacctagggttcagtagctttgtccttgc 503 |||||| | || ||||| |||||||| ||||| Sbjct: 3970 taccactttggattcagcagctttgttcttgc 3939
>emb|BX572097.1| Prochlorococcus marinus MIT9313 complete genome; segment 3/7 Length = 349823 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 619 gggtctgagtcgaagtagtggctgacatc 647 ||||||||||||||||||||||||||||| Sbjct: 194515 gggtctgagtcgaagtagtggctgacatc 194487
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 603 ttgcaccagcttcgtcgggtctgagtcgaagtagtggctgacatctgtca 652 |||||||||||| || || || | ||||||||||||||||||||| |||| Sbjct: 943706 ttgcaccagcttggtgggatccgcgtcgaagtagtggctgacatcggtca 943657
>emb|BX833716.1|CNS0A0GN Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL72ZF08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 855 Score = 52.0 bits (26), Expect = 0.002 Identities = 80/98 (81%) Strand = Plus / Minus Query: 358 tcctcgtaaacccagttgtccacctgcccggatgttgcactccatccaacagtatttgtc 417 |||||||| ||||| ||||| || || || || |||||||||||||| ||||| || | | Sbjct: 581 tcctcgtagacccaattgtctacttgacctgacgttgcactccatcccacagtgttggac 522 Query: 418 agccgcttctcgatctctctaactccctcatagccact 455 || | |||||| ||||| | |||||| ||||| ||||| Sbjct: 521 agtctcttctctatctcacgaactccttcatatccact 484
>gb|AF014052.1|AF014052 Nicotiana tabacum Mg protoporphyrin IX chelatase (Chl H) mRNA, complete cds Length = 4578 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/77 (83%) Strand = Plus / Minus Query: 469 tcataccacctagggttcagtagctttgtccttgcatcaagacgcaccgtctccgacaat 528 ||||||||| | ||||||| | |||||||||||| ||||| | ||| ||||| ||||| Sbjct: 4095 tcataccacttggggttcaacaactttgtccttgcgtcaagcctcacagtctcagacaac 4036 Query: 529 gtacgcacctgtgcatt 545 ||||| ||||| ||||| Sbjct: 4035 gtacgtacctgagcatt 4019
>gb|CP000095.1| Prochlorococcus marinus str. NATL2A, complete genome Length = 1842899 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Minus Query: 535 acctgtgcatttgctgtggttgtgtctgctatgta 569 ||||| ||||||||||| |||||||| |||||||| Sbjct: 378072 acctgagcatttgctgtagttgtgtcggctatgta 378038
>emb|AJ001091.1|GMCHLH Glycine max mRNA for magnesium chelatase subunit Length = 4449 Score = 46.1 bits (23), Expect = 0.15 Identities = 131/167 (78%) Strand = Plus / Minus Query: 391 gttgcactccatccaacagtatttgtcagccgcttctcgatctctctaactccctcatag 450 ||||||||||| || || ||||| || || | |||||||||||| | || |||||||| Sbjct: 4051 gttgcactccaccccactgtattggtgagtctcttctcgatctcgcgtacaccctcatat 3992 Query: 451 ccactcttcatcatcccctcataccacctagggttcagtagctttgtccttgcatcaaga 510 ||| | || ||| || ||||||||| | || |||| ||||| || ||||| ||||| Sbjct: 3991 ccagtagacaacatgccttcataccactttggattcaacagcttggttcttgcgtcaagt 3932 Query: 511 cgcaccgtctccgacaatgtacgcacctgtgcatttgctgtggttgt 557 | |||||||| || | |||||| ||||| ||||| ||||||||||| Sbjct: 3931 ctaaccgtctcagaaagtgtacgtacctgagcattggctgtggttgt 3885
>emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome Length = 5205140 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 589 tccttccgcagcccttgcacca 610 |||||||||||||||||||||| Sbjct: 4394500 tccttccgcagcccttgcacca 4394521
>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome Length = 2593857 Score = 44.1 bits (22), Expect = 0.58 Identities = 37/42 (88%) Strand = Plus / Minus Query: 606 caccagcttcgtcgggtctgagtcgaagtagtggctgacatc 647 ||||||||| || || || ||||| ||||||||||||||||| Sbjct: 256558 caccagcttggtgggatcggagtcaaagtagtggctgacatc 256517
>dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome Length = 5277274 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 589 tccttccgcagcccttgcacca 610 |||||||||||||||||||||| Sbjct: 4507606 tccttccgcagcccttgcacca 4507627
>emb|AL773595.10| Mouse DNA sequence from clone RP23-297I16 on chromosome 2, complete sequence Length = 173925 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 303 agtgtccatcagcctcttcctc 324 |||||||||||||||||||||| Sbjct: 46075 agtgtccatcagcctcttcctc 46096
>gb|AC167663.3| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940143D9, complete sequence Length = 118759 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 127 agtgctggaactggttgatcag 148 |||||||||||||||||||||| Sbjct: 81780 agtgctggaactggttgatcag 81759
>gb|AC167560.3| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940139D9, complete sequence Length = 118752 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 127 agtgctggaactggttgatcag 148 |||||||||||||||||||||| Sbjct: 81777 agtgctggaactggttgatcag 81756
>gb|AC167664.4| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940124D9, complete sequence Length = 118889 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 127 agtgctggaactggttgatcag 148 |||||||||||||||||||||| Sbjct: 36975 agtgctggaactggttgatcag 36996
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 619 gggtctgagtcgaagtagtggctgacatc 647 ||||| ||||||||||||||||| ||||| Sbjct: 1667646 gggtcggagtcgaagtagtggctcacatc 1667674 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 129 tgctggaactggttgatcagt 149 ||||||||||||||||||||| Sbjct: 1118684 tgctggaactggttgatcagt 1118704
>gb|AC124777.4| Mus musculus BAC clone RP23-90I17 from chromosome 12, complete sequence Length = 248983 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 203 gctccctgagcctttccaagt 223 ||||||||||||||||||||| Sbjct: 25053 gctccctgagcctttccaagt 25073
>gb|AC122013.4| Mus musculus BAC clone RP24-357P7 from chromosome 12, complete sequence Length = 175788 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 203 gctccctgagcctttccaagt 223 ||||||||||||||||||||| Sbjct: 140818 gctccctgagcctttccaagt 140838
>gb|AC117187.3| Mus musculus BAC clone RP23-41M4 from 1, complete sequence Length = 138404 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 68 ataaattacaaattatacaag 88 ||||||||||||||||||||| Sbjct: 4529 ataaattacaaattatacaag 4549
>gb|AC123556.4| Mus musculus BAC clone RP23-176M9 from 1, complete sequence Length = 198900 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 68 ataaattacaaattatacaag 88 ||||||||||||||||||||| Sbjct: 159767 ataaattacaaattatacaag 159787
>emb|BX255277.5| Mouse DNA sequence from clone RP23-478B14 on chromosome 11, complete sequence Length = 169765 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 470 cataccacctagggttcagtagctt 494 |||||||| |||||||||||||||| Sbjct: 162627 cataccacatagggttcagtagctt 162651
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 42.1 bits (21), Expect = 2.3 Identities = 42/49 (85%) Strand = Plus / Plus Query: 604 tgcaccagcttcgtcgggtctgagtcgaagtagtggctgacatctgtca 652 ||||||||||| || || || | |||||||||||||||||||| |||| Sbjct: 1331187 tgcaccagcttggtgggatccgcatcgaagtagtggctgacatccgtca 1331235
>emb|BX830322.1|CNS0A1CD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB73ZD04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 800 Score = 42.1 bits (21), Expect = 2.3 Identities = 45/53 (84%) Strand = Plus / Minus Query: 358 tcctcgtaaacccagttgtccacctgcccggatgttgcactccatccaacagt 410 |||||||| ||||| ||||| || || || || |||||||||||||| ||||| Sbjct: 443 tcctcgtagacccaattgtctacttgacctgaagttgcactccatcccacagt 391 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 172 ccttcgatcttgtcttcaacctccgagt 199 ||||||||||||||||| |||| ||||| Sbjct: 629 ccttcgatcttgtcttccacctgcgagt 602
>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome Length = 6413771 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 619 gggtctgagtcgaagtagtgg 639 ||||||||||||||||||||| Sbjct: 5226374 gggtctgagtcgaagtagtgg 5226394
>emb|AJ307055.1|CRE307055 Chlamydomonas reinhardtii chlH gene for Magnesium chelatase H-subunit, exons 1-12 Length = 7035 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 606 caccagcttcgtcgggtctgagtcgaagtagtg 638 ||||||||| || ||||| |||||||||||||| Sbjct: 5766 caccagcttggtggggtcggagtcgaagtagtg 5734
>emb|AJ307054.1|CRE307054 Chlamydomonas reinhardtii mRNA for Magnesium chelatase H subunit Length = 5050 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 606 caccagcttcgtcgggtctgagtcgaagtagtg 638 ||||||||| || ||||| |||||||||||||| Sbjct: 3781 caccagcttggtggggtcggagtcgaagtagtg 3749
>gb|AF069768.1|AF069768 Chlamydomonas reinhardtii magnesium chelatase H subunit (ChlH) mRNA, partial cds Length = 3149 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 606 caccagcttcgtcgggtctgagtcgaagtagtg 638 ||||||||| || ||||| |||||||||||||| Sbjct: 1875 caccagcttggtggggtcggagtcgaagtagtg 1843
>gb|AY667313.1| Ciona intestinalis isolate France 3 col5a1 gene, partial cds Length = 4164 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 616 gtcgggtctgagtcgaagta 635 |||||||||||||||||||| Sbjct: 4160 gtcgggtctgagtcgaagta 4141
>gb|AC103941.12| Mus musculus chromosome 9, clone RP23-430I4, complete sequence Length = 172217 Score = 40.1 bits (20), Expect = 9.0 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 64 ttatataaatta-caaattatacaagtt 90 |||||||||||| ||||||||||||||| Sbjct: 124375 ttatataaattaacaaattatacaagtt 124402
>ref|XM_715650.1| Candida albicans SC5314 putative serine/threonine-protein kinase Hsl1 (CaO19_11784), mRNA Length = 4389 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 330 ttcatcttcgatgaatgtgg 349 |||||||||||||||||||| Sbjct: 66 ttcatcttcgatgaatgtgg 85
>ref|XM_715522.1| Candida albicans SC5314 putative serine/threonine-protein kinase Hsl1 (CaO19_4308), mRNA Length = 4389 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 330 ttcatcttcgatgaatgtgg 349 |||||||||||||||||||| Sbjct: 66 ttcatcttcgatgaatgtgg 85
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence Length = 6365727 Score = 40.1 bits (20), Expect = 9.0 Identities = 38/44 (86%) Strand = Plus / Minus Query: 358 tcctcgtaaacccagttgtccacctgcccggatgttgcactcca 401 |||||||||| |||||||||||| |||| |||||||||||| Sbjct: 4137838 tcctcgtaaatccagttgtccacagcgccggctgttgcactcca 4137795
>gb|AC091276.7| Mus musculus chromosome 15, clone RP23-167B4, complete sequence Length = 255663 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 ttatataaattacaaattat 83 |||||||||||||||||||| Sbjct: 3809 ttatataaattacaaattat 3828
>emb|CT025685.5| Mouse DNA sequence from clone RP24-116B6 on chromosome 9, complete sequence Length = 173933 Score = 40.1 bits (20), Expect = 9.0 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 64 ttatataaatta-caaattatacaagtt 90 |||||||||||| ||||||||||||||| Sbjct: 158658 ttatataaattaacaaattatacaagtt 158631
>gb|AC124182.4| Mus musculus BAC clone RP23-207J3 from chromosome 15, complete sequence Length = 195532 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 ttatataaattacaaattat 83 |||||||||||||||||||| Sbjct: 28925 ttatataaattacaaattat 28906
>emb|AL732591.4| Human DNA sequence from clone RP11-566B18 on chromosome Xq24-25, complete sequence Length = 94595 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 tatataaattacaaattata 84 |||||||||||||||||||| Sbjct: 64215 tatataaattacaaattata 64196
>gb|AE014839.1| Plasmodium falciparum 3D7 chromosome 11 section 4 of 8 of the complete sequence Length = 250029 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 tatataaattacaaattata 84 |||||||||||||||||||| Sbjct: 246980 tatataaattacaaattata 246961
>emb|AL354735.14| Human DNA sequence from clone RP11-738I14 on chromosome 9 Contains the 3' end of the DDX31 gene for DEAD/H box polypeptide 31, the BARHL1 gene for BarH-like 1 (Drosophila) protein, two novel genes and three CpG islands, complete sequence Length = 189821 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 atgtctcccagtagcctctg 252 |||||||||||||||||||| Sbjct: 108164 atgtctcccagtagcctctg 108183
>emb|AL022577.1|HS353H6 Human DNA sequence from clone RP3-353H6 on chromosome Xq25-26.2 Contains the 3' end of the SMARCA1 gene for SWI/SNF related, matrix associated, actin dependent regulator of chromatin (subfamily a, member 1) and aribosomal protein S26 (RPS26) pseudogene, complete sequence Length = 147394 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 aaattacaaattatacaagt 89 |||||||||||||||||||| Sbjct: 50481 aaattacaaattatacaagt 50462
>emb|BX908771.7| Zebrafish DNA sequence from clone CH211-214K13 in linkage group 3, complete sequence Length = 114109 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 538 tgtgcatttgctgtggttgt 557 |||||||||||||||||||| Sbjct: 48919 tgtgcatttgctgtggttgt 48938
>emb|CR753840.11| Zebrafish DNA sequence from clone DKEY-208H10 in linkage group 5, complete sequence Length = 121731 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 ttatataaattacaaattatacaa 87 ||||| |||||||||||||||||| Sbjct: 65510 ttatacaaattacaaattatacaa 65487
>emb|AL732599.5| Mouse DNA sequence from clone RP24-312B5 on chromosome 4 Contains the 5' end of the Tnfsf8 gene for tumor necrosis factor (ligand) superfamily member 8 and a ribosomal protein L17 (Rpl17) pseudogene, complete sequence Length = 95217 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 ataaattacaaattatacaa 87 |||||||||||||||||||| Sbjct: 50724 ataaattacaaattatacaa 50705
>gb|AC157020.8| Mus musculus 10 BAC RP24-459C13 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 183687 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 481 gggttcagtagctttgtcct 500 |||||||||||||||||||| Sbjct: 55631 gggttcagtagctttgtcct 55650
>gb|AC159137.8| Mus musculus 10 BAC RP23-9N9 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 207728 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 214 ctttccaagttatcctctgatgtc 237 |||| ||||||||||||||||||| Sbjct: 69385 ctttgcaagttatcctctgatgtc 69362
>gb|AC120983.6| Oryza sativa chromosome 3 BAC OSJNBb0011H13 genomic sequence, complete sequence Length = 132782 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 583 cgcccatccttccgcagccc 602 |||||||||||||||||||| Sbjct: 109956 cgcccatccttccgcagccc 109937
>gb|AC073947.46| Mus musculus strain C57BL/6J chromosome 9 clone rp23-80d20, complete sequence Length = 247089 Score = 40.1 bits (20), Expect = 9.0 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 64 ttatataaatta-caaattatacaagtt 90 |||||||||||| ||||||||||||||| Sbjct: 15786 ttatataaattaacaaattatacaagtt 15759
>dbj|AK173865.1| Ciona intestinalis cDNA, clone:ciad063c13, full insert sequence Length = 285 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 66 atataaattacaaattatacaagtttca 93 |||||||||| |||| |||||||||||| Sbjct: 245 atataaattataaatgatacaagtttca 272
>emb|AL357095.4|CNS05TDU Human chromosome 14 DNA sequence BAC R-48D2 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 181805 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 48 tattgcatgttacaacttatataaatta 75 ||||||||| | |||||||||||||||| Sbjct: 176724 tattgcatgcttcaacttatataaatta 176751
>emb|BX539331.7| Mouse DNA sequence from clone RP23-389M16 on chromosome 7, complete sequence Length = 69108 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 142 tgatcagtgaaatgagttcaccggtcaa 169 |||||||||||||| | ||||||||||| Sbjct: 65153 tgatcagtgaaatgggatcaccggtcaa 65126
>gb|AE017198.1| Lactobacillus johnsonii NCC 533, complete genome Length = 1992676 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 540 tgcatttgctgtggttgtgt 559 |||||||||||||||||||| Sbjct: 1506003 tgcatttgctgtggttgtgt 1505984
>gb|AF499468.1| Mus musculus MT-MC1 (Mtmc1) gene, complete cds Length = 12008 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 481 gggttcagtagctttgtcct 500 |||||||||||||||||||| Sbjct: 7316 gggttcagtagctttgtcct 7335
>gb|DQ149245.1| Lactococcus lactis plasmid pSK11P, complete sequence Length = 75814 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 tttgaagcagcttcctgaac 291 |||||||||||||||||||| Sbjct: 21228 tttgaagcagcttcctgaac 21247
>emb|AL162811.6|CNS01RI1 Human chromosome 14 DNA sequence BAC R-101G3 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 161204 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 48 tattgcatgttacaacttatataaatta 75 ||||||||| | |||||||||||||||| Sbjct: 20280 tattgcatgcttcaacttatataaatta 20307 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,035,181 Number of Sequences: 3902068 Number of extensions: 6035181 Number of successful extensions: 121902 Number of sequences better than 10.0: 79 Number of HSP's better than 10.0 without gapping: 77 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 121377 Number of HSP's gapped (non-prelim): 524 length of query: 659 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 636 effective length of database: 17,143,297,704 effective search space: 10903137339744 effective search space used: 10903137339744 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
