ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags11f23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_478125.1| Oryza sativa (japonica cultivar-group), mRNA 359 6e-96
2ref|XM_506344.1| PREDICTED Oryza sativa (japonica cultivar-group... 359 6e-96
3dbj|AK068175.1| Oryza sativa (japonica cultivar-group) cDNA clon... 359 6e-96
4dbj|AK063998.1| Oryza sativa (japonica cultivar-group) cDNA clon... 359 6e-96
5dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 262 1e-66
6dbj|AP004348.4| Oryza sativa (japonica cultivar-group) genomic D... 262 1e-66
7gb|AY105276.1| Zea mays PCO109481 mRNA sequence 157 4e-35
8ref|NM_203244.1| Arabidopsis thaliana Rho GTPase activator AT5G6... 46 0.12
9ref|NM_125546.1| Arabidopsis thaliana Rho GTPase activator AT5G6... 46 0.12
10gb|AY133882.1| Arabidopsis thaliana clone U10143 unknown protein... 46 0.12
11gb|AY045924.1| Arabidopsis thaliana unknown protein (At5g61530) ... 46 0.12
12emb|BX831842.1|CNS0A1ZG Arabidopsis thaliana Full-length cDNA Co... 46 0.12
13emb|BX831138.1|CNS0A1RB Arabidopsis thaliana Full-length cDNA Co... 46 0.12
14gb|AY085460.1| Arabidopsis thaliana clone 152557 mRNA, complete ... 46 0.12
15gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 44 0.46
16dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.46
17gb|AC087851.4|AC087851 Oryza sativa chromosome 3 BAC OSJNBb0072E... 44 0.46
18dbj|AB012239.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 44 0.46
19ref|XM_653478.1| Aspergillus nidulans FGSC A4 hypothetical prote... 42 1.8
20gb|AC146183.3| Pan troglodytes BAC clone CH251-548L16 from Y, co... 42 1.8
21dbj|BS000630.2| Pan troglodytes chromosome Y clone: PTB-245N19, ... 42 1.8
22gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence 42 1.8
23gb|DQ149914.1| Uncultured bacterium clone ARDNA17 16S ribosomal ... 42 1.8
24gb|AC007155.16| Arabidopsis thaliana chromosome 2 clone T18E17 m... 42 1.8
25gb|AC154339.2| Mus musculus BAC clone RP23-248O15 from chromosom... 42 1.8
26dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
27gb|AC117451.3| Homo sapiens 3 BAC RP11-331K15 (Roswell Park Canc... 42 1.8
28gb|AF296829.1|F3D18 Arabidopsis thaliana BAC F3D18 42 1.8
29gb|AC000133.1|ENAC000133 Emericella nidulans cosmid SW06E08, com... 42 1.8
30dbj|AP005382.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
31dbj|AP003575.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
32dbj|AB046434.1| Arabidopsis thaliana DNA, chromosome 5 centromer... 42 1.8
33gb|AC007004.3|AC007004 Homo sapiens clone NH0521D03, complete se... 42 1.8
34gb|AC168072.3| Mus musculus BAC clone CH25-291I13 from chromosom... 42 1.8
35gb|DQ094189.1| Toxoplasma gondii ATP-binding cassette protein su... 40 7.2
36ref|XM_658975.1| Aspergillus nidulans FGSC A4 hypothetical prote... 40 7.2
37ref|XM_755779.1| Ustilago maydis 521 hypothetical protein (UM047... 40 7.2
38ref|XM_744619.1| Aspergillus fumigatus Af293 hypothetical protei... 40 7.2
39ref|XM_663323.1| Cryptosporidium hominis TU502 hypothetical prot... 40 7.2
40gb|CP000284.1| Methylobacillus flagellatus KT, complete genome 40 7.2
41emb|AL049820.23|HSDJ137K2 Human DNA sequence from clone RP1-137K... 40 7.2
42emb|BX928758.9| Zebrafish DNA sequence from clone DKEY-206M15 in... 40 7.2
43gb|AC024221.23| Homo sapiens 3 BAC RP11-227J5 (Roswell Park Canc... 40 7.2
44ref|XM_626328.1| Cryptosporidium parvum Iowa II hypothetical pro... 40 7.2
45gb|AC026742.3| Homo sapiens chromosome 5 clone CTD-3103E19, comp... 40 7.2
46emb|BX510917.5| Zebrafish DNA sequence from clone CH211-250O15 i... 40 7.2
47emb|AL805896.12| Mouse DNA sequence from clone RP23-402I8 on chr... 40 7.2
48gb|AC093633.3| Homo sapiens BAC clone RP11-157M22 from 2, comple... 40 7.2
49gb|AC012462.5| Homo sapiens BAC clone RP11-566P21 from 2, comple... 40 7.2
50gb|AF111169.2|AF111169 Homo sapiens chromosome 14 BAC containing... 40 7.2
51gb|AC132911.12| Mus musculus chromosome 17, clone RP24-358A14, c... 40 7.2
52emb|CR848815.7| Zebrafish DNA sequence from clone CH211-197C11 i... 40 7.2
53emb|AL807795.7| Mouse DNA sequence from clone RP23-199A9 on chro... 40 7.2
54emb|AL833778.5| Mouse DNA sequence from clone RP23-404M22 on chr... 40 7.2 
>ref|XM_478125.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1774

 Score =  359 bits (181), Expect = 6e-96
 Identities = 321/370 (86%)
 Strand = Plus / Plus

                                                                       
Query: 165 gatgccgcttgtggaatcgcctcaatggcgccggaaggcgaccgatttcttctcttcatc 224
           ||||||||| | |||||||||||| ||||||| |||||| ||  ||||||||||||||||
Sbjct: 248 gatgccgctggcggaatcgcctcagtggcgccagaaggccacgaatttcttctcttcatc 307

                                                                       
Query: 225 tagtttcaagctgaagcaggcagggcaatctgcaggggataatatagctgatgttgctgg 284
            || |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 308 cagcttcaagctgaagcaggcagggcaatcagcaggggacaatatagctgatgttgctgg 367

                                                                       
Query: 285 gaaggttggaacagtggtgaagagtcggtgggctatcttccaggatgctagacagcgacc 344
            ||||||||  ||||||| ||||||||||||||| |||||||||| ||||| ||| | | 
Sbjct: 368 caaggttggttcagtggttaagagtcggtgggctgtcttccaggaggctaggcagaggca 427

                                                                       
Query: 345 gccactacctggagataccgtgcaggagcgcttcatctctgctgccgctaacactggagt 404
           ||| | ||| || || || ||||| ||||| |||||||||||||| || | |||||| ||
Sbjct: 428 gccgccaccaggggagactgtgcaagagcgtttcatctctgctgctgccaccactggggt 487

                                                                       
Query: 405 gattctgaggaagggcatttcagagacaaaggagaaggtcgcagttggaaaggtcaaagt 464
           | |||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||
Sbjct: 488 gcttctgaggaagggcatttcagagacaaaggagaaagttgcagtgggaaaggtcaaagt 547

                                                                       
Query: 465 tgaagaggctgccnnnnnnnctgcggataaaagcaaaactattttgaacaatattgaacg 524
           ||||||||||||        |||| || |||||||| |||||||||||||| ||||||||
Sbjct: 548 tgaagaggctgctaaaaaaactgctgacaaaagcaagactattttgaacaacattgaacg 607

                     
Query: 525 ctggcagaag 534
           ||||||||||
Sbjct: 608 ctggcagaag 617
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>ref|XM_506344.1| PREDICTED Oryza sativa (japonica cultivar-group), P0683C09.107 mRNA
          Length = 1824

 Score =  359 bits (181), Expect = 6e-96
 Identities = 321/370 (86%)
 Strand = Plus / Plus

                                                                       
Query: 165 gatgccgcttgtggaatcgcctcaatggcgccggaaggcgaccgatttcttctcttcatc 224
           ||||||||| | |||||||||||| ||||||| |||||| ||  ||||||||||||||||
Sbjct: 483 gatgccgctggcggaatcgcctcagtggcgccagaaggccacgaatttcttctcttcatc 542

                                                                       
Query: 225 tagtttcaagctgaagcaggcagggcaatctgcaggggataatatagctgatgttgctgg 284
            || |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 543 cagcttcaagctgaagcaggcagggcaatcagcaggggacaatatagctgatgttgctgg 602

                                                                       
Query: 285 gaaggttggaacagtggtgaagagtcggtgggctatcttccaggatgctagacagcgacc 344
            ||||||||  ||||||| ||||||||||||||| |||||||||| ||||| ||| | | 
Sbjct: 603 caaggttggttcagtggttaagagtcggtgggctgtcttccaggaggctaggcagaggca 662

                                                                       
Query: 345 gccactacctggagataccgtgcaggagcgcttcatctctgctgccgctaacactggagt 404
           ||| | ||| || || || ||||| ||||| |||||||||||||| || | |||||| ||
Sbjct: 663 gccgccaccaggggagactgtgcaagagcgtttcatctctgctgctgccaccactggggt 722

                                                                       
Query: 405 gattctgaggaagggcatttcagagacaaaggagaaggtcgcagttggaaaggtcaaagt 464
           | |||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||
Sbjct: 723 gcttctgaggaagggcatttcagagacaaaggagaaagttgcagtgggaaaggtcaaagt 782

                                                                       
Query: 465 tgaagaggctgccnnnnnnnctgcggataaaagcaaaactattttgaacaatattgaacg 524
           ||||||||||||        |||| || |||||||| |||||||||||||| ||||||||
Sbjct: 783 tgaagaggctgctaaaaaaactgctgacaaaagcaagactattttgaacaacattgaacg 842

                     
Query: 525 ctggcagaag 534
           ||||||||||
Sbjct: 843 ctggcagaag 852
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>dbj|AK068175.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013130L24, full
           insert sequence
          Length = 1774

 Score =  359 bits (181), Expect = 6e-96
 Identities = 321/370 (86%)
 Strand = Plus / Plus

                                                                       
Query: 165 gatgccgcttgtggaatcgcctcaatggcgccggaaggcgaccgatttcttctcttcatc 224
           ||||||||| | |||||||||||| ||||||| |||||| ||  ||||||||||||||||
Sbjct: 248 gatgccgctggcggaatcgcctcagtggcgccagaaggccacgaatttcttctcttcatc 307

                                                                       
Query: 225 tagtttcaagctgaagcaggcagggcaatctgcaggggataatatagctgatgttgctgg 284
            || |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 308 cagcttcaagctgaagcaggcagggcaatcagcaggggacaatatagctgatgttgctgg 367

                                                                       
Query: 285 gaaggttggaacagtggtgaagagtcggtgggctatcttccaggatgctagacagcgacc 344
            ||||||||  ||||||| ||||||||||||||| |||||||||| ||||| ||| | | 
Sbjct: 368 caaggttggttcagtggttaagagtcggtgggctgtcttccaggaggctaggcagaggca 427

                                                                       
Query: 345 gccactacctggagataccgtgcaggagcgcttcatctctgctgccgctaacactggagt 404
           ||| | ||| || || || ||||| ||||| |||||||||||||| || | |||||| ||
Sbjct: 428 gccgccaccaggggagactgtgcaagagcgtttcatctctgctgctgccaccactggggt 487

                                                                       
Query: 405 gattctgaggaagggcatttcagagacaaaggagaaggtcgcagttggaaaggtcaaagt 464
           | |||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||
Sbjct: 488 gcttctgaggaagggcatttcagagacaaaggagaaagttgcagtgggaaaggtcaaagt 547

                                                                       
Query: 465 tgaagaggctgccnnnnnnnctgcggataaaagcaaaactattttgaacaatattgaacg 524
           ||||||||||||        |||| || |||||||| |||||||||||||| ||||||||
Sbjct: 548 tgaagaggctgctaaaaaaactgctgacaaaagcaagactattttgaacaacattgaacg 607

                     
Query: 525 ctggcagaag 534
           ||||||||||
Sbjct: 608 ctggcagaag 617
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>dbj|AK063998.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-F03, full
           insert sequence
          Length = 1824

 Score =  359 bits (181), Expect = 6e-96
 Identities = 321/370 (86%)
 Strand = Plus / Plus

                                                                       
Query: 165 gatgccgcttgtggaatcgcctcaatggcgccggaaggcgaccgatttcttctcttcatc 224
           ||||||||| | |||||||||||| ||||||| |||||| ||  ||||||||||||||||
Sbjct: 483 gatgccgctggcggaatcgcctcagtggcgccagaaggccacgaatttcttctcttcatc 542

                                                                       
Query: 225 tagtttcaagctgaagcaggcagggcaatctgcaggggataatatagctgatgttgctgg 284
            || |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 543 cagcttcaagctgaagcaggcagggcaatcagcaggggacaatatagctgatgttgctgg 602

                                                                       
Query: 285 gaaggttggaacagtggtgaagagtcggtgggctatcttccaggatgctagacagcgacc 344
            ||||||||  ||||||| ||||||||||||||| |||||||||| ||||| ||| | | 
Sbjct: 603 caaggttggttcagtggttaagagtcggtgggctgtcttccaggaggctaggcagaggca 662

                                                                       
Query: 345 gccactacctggagataccgtgcaggagcgcttcatctctgctgccgctaacactggagt 404
           ||| | ||| || || || ||||| ||||| |||||||||||||| || | |||||| ||
Sbjct: 663 gccgccaccaggggagactgtgcaagagcgtttcatctctgctgctgccaccactggggt 722

                                                                       
Query: 405 gattctgaggaagggcatttcagagacaaaggagaaggtcgcagttggaaaggtcaaagt 464
           | |||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||
Sbjct: 723 gcttctgaggaagggcatttcagagacaaaggagaaagttgcagtgggaaaggtcaaagt 782

                                                                       
Query: 465 tgaagaggctgccnnnnnnnctgcggataaaagcaaaactattttgaacaatattgaacg 524
           ||||||||||||        |||| || |||||||| |||||||||||||| ||||||||
Sbjct: 783 tgaagaggctgctaaaaaaactgctgacaaaagcaagactattttgaacaacattgaacg 842

                     
Query: 525 ctggcagaag 534
           ||||||||||
Sbjct: 843 ctggcagaag 852
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  262 bits (132), Expect = 1e-66
 Identities = 216/244 (88%)
 Strand = Plus / Plus

                                                                            
Query: 229      ttcaagctgaagcaggcagggcaatctgcaggggataatatagctgatgttgctgggaag 288
                |||||||||||||||||||||||||| |||||||| |||||||||||||||||||| |||
Sbjct: 17855364 ttcaagctgaagcaggcagggcaatcagcaggggacaatatagctgatgttgctggcaag 17855423

                                                                            
Query: 289      gttggaacagtggtgaagagtcggtgggctatcttccaggatgctagacagcgaccgcca 348
                |||||  ||||||| ||||||||||||||| |||||||||| ||||| ||| | | ||| 
Sbjct: 17855424 gttggttcagtggttaagagtcggtgggctgtcttccaggaggctaggcagaggcagccg 17855483

                                                                            
Query: 349      ctacctggagataccgtgcaggagcgcttcatctctgctgccgctaacactggagtgatt 408
                | ||| || || || ||||| ||||| |||||||||||||| || | |||||| ||| ||
Sbjct: 17855484 ccaccaggggagactgtgcaagagcgtttcatctctgctgctgccaccactggggtgctt 17855543

                                                                            
Query: 409      ctgaggaagggcatttcagagacaaaggagaaggtcgcagttggaaaggtcaaagttgaa 468
                |||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||
Sbjct: 17855544 ctgaggaagggcatttcagagacaaaggagaaagttgcagtgggaaaggtcaaagttgaa 17855603

                    
Query: 469      gagg 472
                ||||
Sbjct: 17855604 gagg 17855607



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 40/42 (95%)
 Strand = Plus / Plus

                                                          
Query: 493      aaaagcaaaactattttgaacaatattgaacgctggcagaag 534
                |||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 17856148 aaaagcaagactattttgaacaacattgaacgctggcagaag 17856189



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 53/60 (88%)
 Strand = Plus / Plus

                                                                            
Query: 165      gatgccgcttgtggaatcgcctcaatggcgccggaaggcgaccgatttcttctcttcatc 224
                ||||||||| | |||||||||||| ||||||| |||||| ||  ||||||||||||||||
Sbjct: 17854786 gatgccgctggcggaatcgcctcagtggcgccagaaggccacgaatttcttctcttcatc 17854845
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>dbj|AP004348.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0683C09
          Length = 185139

 Score =  262 bits (132), Expect = 1e-66
 Identities = 216/244 (88%)
 Strand = Plus / Plus

                                                                         
Query: 229   ttcaagctgaagcaggcagggcaatctgcaggggataatatagctgatgttgctgggaag 288
             |||||||||||||||||||||||||| |||||||| |||||||||||||||||||| |||
Sbjct: 82356 ttcaagctgaagcaggcagggcaatcagcaggggacaatatagctgatgttgctggcaag 82415

                                                                         
Query: 289   gttggaacagtggtgaagagtcggtgggctatcttccaggatgctagacagcgaccgcca 348
             |||||  ||||||| ||||||||||||||| |||||||||| ||||| ||| | | ||| 
Sbjct: 82416 gttggttcagtggttaagagtcggtgggctgtcttccaggaggctaggcagaggcagccg 82475

                                                                         
Query: 349   ctacctggagataccgtgcaggagcgcttcatctctgctgccgctaacactggagtgatt 408
             | ||| || || || ||||| ||||| |||||||||||||| || | |||||| ||| ||
Sbjct: 82476 ccaccaggggagactgtgcaagagcgtttcatctctgctgctgccaccactggggtgctt 82535

                                                                         
Query: 409   ctgaggaagggcatttcagagacaaaggagaaggtcgcagttggaaaggtcaaagttgaa 468
             |||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||
Sbjct: 82536 ctgaggaagggcatttcagagacaaaggagaaagttgcagtgggaaaggtcaaagttgaa 82595

                 
Query: 469   gagg 472
             ||||
Sbjct: 82596 gagg 82599



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 40/42 (95%)
 Strand = Plus / Plus

                                                       
Query: 493   aaaagcaaaactattttgaacaatattgaacgctggcagaag 534
             |||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 83140 aaaagcaagactattttgaacaacattgaacgctggcagaag 83181



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 53/60 (88%)
 Strand = Plus / Plus

                                                                         
Query: 165   gatgccgcttgtggaatcgcctcaatggcgccggaaggcgaccgatttcttctcttcatc 224
             ||||||||| | |||||||||||| ||||||| |||||| ||  ||||||||||||||||
Sbjct: 81778 gatgccgctggcggaatcgcctcagtggcgccagaaggccacgaatttcttctcttcatc 81837
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>gb|AY105276.1| Zea mays PCO109481 mRNA sequence
          Length = 1512

 Score =  157 bits (79), Expect = 4e-35
 Identities = 133/151 (88%)
 Strand = Plus / Plus

                                                                       
Query: 190 tggcgccggaaggcgaccgatttcttctcttcatctagtttcaagctgaagcaggcaggg 249
           |||||||| || || || |||||||||||  |||||||| ||||||||||||||||||||
Sbjct: 175 tggcgccgcaaagccacggatttcttctccacatctagtgtcaagctgaagcaggcaggg 234

                                                                       
Query: 250 caatctgcaggggataatatagctgatgttgctgggaaggttggaacagtggtgaagagt 309
           ||||| || |||||||||||||||||||||||||||||||||||  | | ||||||||||
Sbjct: 235 caatcggccggggataatatagctgatgttgctgggaaggttgggtccgcggtgaagagt 294

                                          
Query: 310 cggtgggctatcttccaggatgctagacagc 340
           |||||||   |||||||||| ||||| ||||
Sbjct: 295 cggtgggtcgtcttccaggaggctaggcagc 325



 Score =  139 bits (70), Expect = 1e-29
 Identities = 108/123 (87%)
 Strand = Plus / Plus

                                                                       
Query: 412 aggaagggcatttcagagacaaaggagaaggtcgcagttggaaaggtcaaagttgaagag 471
           ||||| |||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 406 aggaaaggcatttcagagacaaaggagaaggttgcagtgggaaaggtcaaagttgaagag 465

                                                                       
Query: 472 gctgccnnnnnnnctgcggataaaagcaaaactattttgaacaatattgaacgctggcag 531
           |||||        |||| ||||||||||| | ||| ||||||||||||||||||||||||
Sbjct: 466 gctgctaaaaaaactgcagataaaagcaagagtatcttgaacaatattgaacgctggcag 525

              
Query: 532 aag 534
           |||
Sbjct: 526 aag 528
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>ref|NM_203244.1| Arabidopsis thaliana Rho GTPase activator AT5G61530 transcript
           variant AT5G61530.2 mRNA, complete cds
          Length = 1480

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 427 gagacaaaggagaaggtcgcagttggaaaggtcaaagttgaagaggc 473
           ||||||||||| |||||  | ||||||||| ||||||| ||||||||
Sbjct: 483 gagacaaaggaaaaggtttctgttggaaagatcaaagtggaagaggc 529
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>ref|NM_125546.1| Arabidopsis thaliana Rho GTPase activator AT5G61530 transcript
           variant AT5G61530.1 mRNA, complete cds
          Length = 1536

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 427 gagacaaaggagaaggtcgcagttggaaaggtcaaagttgaagaggc 473
           ||||||||||| |||||  | ||||||||| ||||||| ||||||||
Sbjct: 516 gagacaaaggaaaaggtttctgttggaaagatcaaagtggaagaggc 562
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>gb|AY133882.1| Arabidopsis thaliana clone U10143 unknown protein (At5g61530) mRNA,
           complete cds
          Length = 1162

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 427 gagacaaaggagaaggtcgcagttggaaaggtcaaagttgaagaggc 473
           ||||||||||| |||||  | ||||||||| ||||||| ||||||||
Sbjct: 280 gagacaaaggaaaaggtttctgttggaaagatcaaagtggaagaggc 326
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>gb|AY045924.1| Arabidopsis thaliana unknown protein (At5g61530) mRNA, complete cds
          Length = 1517

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 427 gagacaaaggagaaggtcgcagttggaaaggtcaaagttgaagaggc 473
           ||||||||||| |||||  | ||||||||| ||||||| ||||||||
Sbjct: 483 gagacaaaggaaaaggtttctgttggaaagatcaaagtggaagaggc 529
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>emb|BX831842.1|CNS0A1ZG Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH33ZA07 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1480

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 427 gagacaaaggagaaggtcgcagttggaaaggtcaaagttgaagaggc 473
           ||||||||||| |||||  | ||||||||| ||||||| ||||||||
Sbjct: 502 gagacaaaggaaaaggtttctgttggaaagatcaaagtggaagaggc 548
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>emb|BX831138.1|CNS0A1RB Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS60ZC08 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1476

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 427 gagacaaaggagaaggtcgcagttggaaaggtcaaagttgaagaggc 473
           ||||||||||| |||||  | ||||||||| ||||||| ||||||||
Sbjct: 481 gagacaaaggaaaaggtttctgttggaaagatcaaagtggaagaggc 527
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>gb|AY085460.1| Arabidopsis thaliana clone 152557 mRNA, complete sequence
          Length = 1536

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 427 gagacaaaggagaaggtcgcagttggaaaggtcaaagttgaagaggc 473
           ||||||||||| |||||  | ||||||||| ||||||| ||||||||
Sbjct: 516 gagacaaaggaaaaggtttctgttggaaagatcaaagtggaagaggc 562
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 497      gcaaaactattttgaacaatat 518
                ||||||||||||||||||||||
Sbjct: 26992477 gcaaaactattttgaacaatat 26992456
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 497      gcaaaactattttgaacaatat 518
                ||||||||||||||||||||||
Sbjct: 27083800 gcaaaactattttgaacaatat 27083779
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>gb|AC087851.4|AC087851 Oryza sativa chromosome 3 BAC OSJNBb0072E24 genomic sequence, complete
             sequence
          Length = 111882

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 497   gcaaaactattttgaacaatat 518
             ||||||||||||||||||||||
Sbjct: 66922 gcaaaactattttgaacaatat 66943
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>dbj|AB012239.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K11J9
          Length = 69142

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                           
Query: 427   gagacaaaggagaaggtcgcagttggaaaggtcaaagttgaagagg 472
             ||||||||||| |||||  | ||||||||| ||||||| |||||||
Sbjct: 17569 gagacaaaggaaaaggtttctgttggaaagatcaaagtggaagagg 17614
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>ref|XM_653478.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN0966.2), mRNA
          Length = 771

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 15  cgattcgatccgaacccatcc 35
           |||||||||||||||||||||
Sbjct: 478 cgattcgatccgaacccatcc 498
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>gb|AC146183.3| Pan troglodytes BAC clone CH251-548L16 from Y, complete sequence
          Length = 234142

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 233    agctgaagcaggcagggcaat 253
              |||||||||||||||||||||
Sbjct: 138088 agctgaagcaggcagggcaat 138108
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>dbj|BS000630.2| Pan troglodytes chromosome Y clone: PTB-245N19, complete sequence
          Length = 149685

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 233    agctgaagcaggcagggcaat 253
              |||||||||||||||||||||
Sbjct: 132059 agctgaagcaggcagggcaat 132079
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>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 233      agctgaagcaggcagggcaat 253
                |||||||||||||||||||||
Sbjct: 18657205 agctgaagcaggcagggcaat 18657185
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>gb|DQ149914.1| Uncultured bacterium clone ARDNA17 16S ribosomal RNA gene, partial
           sequence
          Length = 655

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 309 tcggtgggctatcttccagga 329
           |||||||||||||||||||||
Sbjct: 134 tcggtgggctatcttccagga 114
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>gb|AC007155.16| Arabidopsis thaliana chromosome 2 clone T18E17 map PR1, complete
             sequence
          Length = 96095

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 273   tgatgttgctgggaaggttgg 293
             |||||||||||||||||||||
Sbjct: 62323 tgatgttgctgggaaggttgg 62343
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>gb|AC154339.2| Mus musculus BAC clone RP23-248O15 from chromosome 13, complete
            sequence
          Length = 174982

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 499  aaaactattttgaacaatattgaac 523
            ||||||||||| |||||||||||||
Sbjct: 1754 aaaactattttcaacaatattgaac 1778
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 374     gcttcatctctgctgccgcta 394
               |||||||||||||||||||||
Sbjct: 8848909 gcttcatctctgctgccgcta 8848889
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>gb|AC117451.3| Homo sapiens 3 BAC RP11-331K15 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 181637

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 503    ctattttgaacaatattgaac 523
              |||||||||||||||||||||
Sbjct: 100597 ctattttgaacaatattgaac 100617
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>gb|AF296829.1|F3D18 Arabidopsis thaliana BAC F3D18
          Length = 88126

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 273   tgatgttgctgggaaggttgg 293
             |||||||||||||||||||||
Sbjct: 83506 tgatgttgctgggaaggttgg 83526
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>gb|AC000133.1|ENAC000133 Emericella nidulans cosmid SW06E08, complete sequence
          Length = 38807

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 15    cgattcgatccgaacccatcc 35
             |||||||||||||||||||||
Sbjct: 26143 cgattcgatccgaacccatcc 26123
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>dbj|AP005382.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OJ1001_B06
          Length = 134810

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 374    gcttcatctctgctgccgcta 394
              |||||||||||||||||||||
Sbjct: 119230 gcttcatctctgctgccgcta 119210
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>dbj|AP003575.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0528B02
          Length = 144495

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 374   gcttcatctctgctgccgcta 394
             |||||||||||||||||||||
Sbjct: 14538 gcttcatctctgctgccgcta 14518
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>dbj|AB046434.1| Arabidopsis thaliana DNA, chromosome 5 centromere region, clone:F28L21
          Length = 35187

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 273   tgatgttgctgggaaggttgg 293
             |||||||||||||||||||||
Sbjct: 28766 tgatgttgctgggaaggttgg 28786
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>gb|AC007004.3|AC007004 Homo sapiens clone NH0521D03, complete sequence
          Length = 35960

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 233   agctgaagcaggcagggcaat 253
             |||||||||||||||||||||
Sbjct: 17580 agctgaagcaggcagggcaat 17560
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>gb|AC168072.3| Mus musculus BAC clone CH25-291I13 from chromosome 13, complete
             sequence
          Length = 110522

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 499   aaaactattttgaacaatattgaac 523
             ||||||||||| |||||||||||||
Sbjct: 79015 aaaactattttcaacaatattgaac 79039
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>gb|DQ094189.1| Toxoplasma gondii ATP-binding cassette protein subfamily B member 2
             (ABC.B2) gene, complete cds
          Length = 24720

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 423   ttcagagacaaaggagaagg 442
             ||||||||||||||||||||
Sbjct: 11947 ttcagagacaaaggagaagg 11966
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>ref|XM_658975.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN6463.2), mRNA
          Length = 795

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 206 ccgatttcttctcttcatct 225
           ||||||||||||||||||||
Sbjct: 108 ccgatttcttctcttcatct 89
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>ref|XM_755779.1| Ustilago maydis 521 hypothetical protein (UM04725.1) partial mRNA
          Length = 3894

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 202  gcgaccgatttcttctcttcatct 225
            |||||||||| |||||||||||||
Sbjct: 2734 gcgaccgattgcttctcttcatct 2711
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>ref|XM_744619.1| Aspergillus fumigatus Af293 hypothetical protein (Afu2g05830)
           partial mRNA
          Length = 2220

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 452 gaaaggtcaaagttgaagag 471
           ||||||||||||||||||||
Sbjct: 710 gaaaggtcaaagttgaagag 691
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>ref|XM_663323.1| Cryptosporidium hominis TU502 hypothetical protein (Chro.20108)
           partial mRNA
          Length = 1800

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 493 aaaagcaaaactattttgaa 512
           ||||||||||||||||||||
Sbjct: 926 aaaagcaaaactattttgaa 907
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>gb|CP000284.1| Methylobacillus flagellatus KT, complete genome
          Length = 2971517

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 511    aacaatattgaacgctggca 530
              ||||||||||||||||||||
Sbjct: 806783 aacaatattgaacgctggca 806764
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>emb|AL049820.23|HSDJ137K2 Human DNA sequence from clone RP1-137K2 on chromosome 6q25.1-25.3
            Contains part of the gene for BRG1-binding protein
            ELD/OSA1 (p250R KIAA1235) (FLJ00253 FLJ22292), a novel
            gene and two CpG islands, complete sequence
          Length = 187507

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 493  aaaagcaaaactattttgaa 512
            ||||||||||||||||||||
Sbjct: 1479 aaaagcaaaactattttgaa 1498
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>emb|BX928758.9| Zebrafish DNA sequence from clone DKEY-206M15 in linkage group 25,
             complete sequence
          Length = 199974

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 490   gataaaagcaaaactatttt 509
             ||||||||||||||||||||
Sbjct: 17891 gataaaagcaaaactatttt 17910
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>gb|AC024221.23| Homo sapiens 3 BAC RP11-227J5 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 132953

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 491   ataaaagcaaaactattttg 510
             ||||||||||||||||||||
Sbjct: 50202 ataaaagcaaaactattttg 50221
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>ref|XM_626328.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd2_970),
            partial mRNA
          Length = 2310

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 493  aaaagcaaaactattttgaa 512
            ||||||||||||||||||||
Sbjct: 1436 aaaagcaaaactattttgaa 1417
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>gb|AC026742.3| Homo sapiens chromosome 5 clone CTD-3103E19, complete sequence
          Length = 149710

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 233    agctgaagcaggcagggcaa 252
              ||||||||||||||||||||
Sbjct: 100705 agctgaagcaggcagggcaa 100686
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>emb|BX510917.5| Zebrafish DNA sequence from clone CH211-250O15 in linkage group 5,
             complete sequence
          Length = 140129

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 492   taaaagcaaaactattttgaacaa 515
             ||||||||||||||||||| ||||
Sbjct: 42283 taaaagcaaaactattttgtacaa 42306
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>emb|AL805896.12| Mouse DNA sequence from clone RP23-402I8 on chromosome 4, complete
             sequence
          Length = 210141

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 500   aaactattttgaacaatatt 519
             ||||||||||||||||||||
Sbjct: 56205 aaactattttgaacaatatt 56224
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>gb|AC093633.3| Homo sapiens BAC clone RP11-157M22 from 2, complete sequence
          Length = 173066

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 233    agctgaagcaggcagggcaa 252
              ||||||||||||||||||||
Sbjct: 110626 agctgaagcaggcagggcaa 110607
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>gb|AC012462.5| Homo sapiens BAC clone RP11-566P21 from 2, complete sequence
          Length = 143947

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 421    atttcagagacaaaggagaa 440
              ||||||||||||||||||||
Sbjct: 111108 atttcagagacaaaggagaa 111127
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>gb|AF111169.2|AF111169 Homo sapiens chromosome 14 BAC containing gene for KIAA0759 and other
             possible new transcripts, complete sequence
          Length = 183916

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 279   tgctgggaaggttggaacag 298
             ||||||||||||||||||||
Sbjct: 77565 tgctgggaaggttggaacag 77584
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>gb|AC132911.12| Mus musculus chromosome 17, clone RP24-358A14, complete sequence
          Length = 195993

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 276   tgttgctgggaaggttggaa 295
             ||||||||||||||||||||
Sbjct: 38580 tgttgctgggaaggttggaa 38599
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>emb|CR848815.7| Zebrafish DNA sequence from clone CH211-197C11 in linkage group 15,
             complete sequence
          Length = 161902

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 491   ataaaagcaaaactattttg 510
             ||||||||||||||||||||
Sbjct: 78083 ataaaagcaaaactattttg 78102
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>emb|AL807795.7| Mouse DNA sequence from clone RP23-199A9 on chromosome X, complete
             sequence
          Length = 152159

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 212   tcttctcttcatctagtttc 231
             ||||||||||||||||||||
Sbjct: 37309 tcttctcttcatctagtttc 37290
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>emb|AL833778.5| Mouse DNA sequence from clone RP23-404M22 on chromosome X, complete
              sequence
          Length = 199554

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 212    tcttctcttcatctagtttc 231
              ||||||||||||||||||||
Sbjct: 175534 tcttctcttcatctagtttc 175515



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 212   tcttctcttcatctagtttc 231
             ||||||||||||||||||||
Sbjct: 69854 tcttctcttcatctagtttc 69835


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,153,281
Number of Sequences: 3902068
Number of extensions: 4153281
Number of successful extensions: 78228
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 78018
Number of HSP's gapped (non-prelim): 204
length of query: 534
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 511
effective length of database: 17,143,297,704
effective search space: 8760225126744
effective search space used: 8760225126744
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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