| Clone Name | bags11f08 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_465763.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2341 Score = 468 bits (236), Expect = e-128 Identities = 474/552 (85%), Gaps = 1/552 (0%) Strand = Plus / Plus Query: 43 aagaagatactagctgaaggcgagaagtgggagaatcccaaagaccgtgatgaagttttt 102 |||||| |||||||||||||| |||||||||||| || | |||||| |||||||||||| Sbjct: 707 aagaaggtactagctgaaggcacgaagtgggagaacccaagagaccgcgatgaagttttt 766 Query: 103 gttaaatatgaggcaaggcttgaggatgggactcttgttacaaaatctgatggcgttgag 162 ||||| ||||||| |||||||||||||||||| |||| || |||||||||| || ||| Sbjct: 767 gttaagtatgaggtgaggcttgaggatgggactgttgtagcagaatctgatggtgtcgag 826 Query: 163 ttcactgtgaaagaagggcatttctgccctgctgtatcgaaggctatcaagacaatgaag 222 ||||| |||||||| ||||||||||| ||||| |||| |||||| | ||||| |||||| Sbjct: 827 ttcaccgtgaaagatgggcatttctgtcctgccatatccaaggctgtgaagactatgaag 886 Query: 223 aagaatgagaaggccctccttacagtcaaaccacaatatggctttggtgggcaaggcagg 282 |||||||||||||||||||| ||||||||||||||||||||||| |||| |||||||||| Sbjct: 887 aagaatgagaaggccctcctcacagtcaaaccacaatatggcttcggtgagcaaggcagg 946 Query: 283 ccagcttctagaggcgaagctgcagtcccccctaatgctatgttgcaaattgatcttcag 342 ||||| |||||| ||||||||| | ||||||||||||| ||||| ||| ||||| | Sbjct: 947 ccagccgctagagatgaagctgcaataccccctaatgctacattgcacattaatcttgaa 1006 Query: 343 ttggtgtcctggaagacagtcactgagataggcaatgacaagacgattctgaaaaagatc 402 ||||||||||||||| ||||||||||||| || ||||| |||| || || || |||||| Sbjct: 1007 ttggtgtcctggaaggcagtcactgagattggtaatgataagaaaatcctcaagaagatc 1066 Query: 403 ctccaggagggtgaaggctatgatcgtcccaaagattgttcaactgtcaaagtgaaactt 462 ||||| ||||||||||||||||| ||||||| ||||| || ||||| |||||||||| Sbjct: 1067 ctccatgagggtgaaggctatgagcgtcccagtgattgcacacttgtcagagtgaaactt 1126 Query: 463 attgggaagttggatgatggcaccatgtttgtaaagaaaggtcatgatggggaagagcca 522 ||||| ||||| || ||||| ||||| ||||| | | |||||||||||| || |||||| Sbjct: 1127 attggaaagttagaggatggtaccatatttgtcacaagaggtcatgatggtgacgagcca 1186 Query: 523 tttgagttcaagactgatgaggatcaggtgattgatgggcttgacaaaagcagtgcttag 582 || ||||| ||||||||||| || || ||| |||| ||||||||| |||||||| ||||| Sbjct: 1187 ttcgagtttaagactgatgaagaccaagtggttgaagggcttgac-aaagcagtacttag 1245 Query: 583 catgaagaaagg 594 |||||||||||| Sbjct: 1246 catgaagaaagg 1257
>dbj|AK073233.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033023H01, full insert sequence Length = 2341 Score = 460 bits (232), Expect = e-126 Identities = 473/552 (85%), Gaps = 1/552 (0%) Strand = Plus / Plus Query: 43 aagaagatactagctgaaggcgagaagtgggagaatcccaaagaccgtgatgaagttttt 102 |||||| |||||||||||||| |||||||||||| || | |||||| |||||||||||| Sbjct: 707 aagaaggtactagctgaaggcacgaagtgggagaacccaagagaccgcgatgaagttttt 766 Query: 103 gttaaatatgaggcaaggcttgaggatgggactcttgttacaaaatctgatggcgttgag 162 ||||| ||||||| |||||||||||||||||| |||| || |||||||||| || ||| Sbjct: 767 gttaagtatgaggtgaggcttgaggatgggactgttgtagcagaatctgatggtgtcgag 826 Query: 163 ttcactgtgaaagaagggcatttctgccctgctgtatcgaaggctatcaagacaatgaag 222 ||||| |||||||| ||||||||||| ||||| |||| |||||| | ||||| |||||| Sbjct: 827 ttcaccgtgaaagatgggcatttctgtcctgccatatccaaggctgtgaagactatgaag 886 Query: 223 aagaatgagaaggccctccttacagtcaaaccacaatatggctttggtgggcaaggcagg 282 |||||||||||||||||||| ||||||||||||||||||||||| |||| |||||||||| Sbjct: 887 aagaatgagaaggccctcctcacagtcaaaccacaatatggcttcggtgagcaaggcagg 946 Query: 283 ccagcttctagaggcgaagctgcagtcccccctaatgctatgttgcaaattgatcttcag 342 |||| |||||| ||||||||| | ||||||||||||| ||||| ||| ||||| | Sbjct: 947 tcagccgctagagatgaagctgcaataccccctaatgctacattgcacattaatcttgaa 1006 Query: 343 ttggtgtcctggaagacagtcactgagataggcaatgacaagacgattctgaaaaagatc 402 ||||||||||||||| ||||||||||||| || ||||| |||| || || || |||||| Sbjct: 1007 ttggtgtcctggaaggcagtcactgagattggtaatgataagaaaatcctcaagaagatc 1066 Query: 403 ctccaggagggtgaaggctatgatcgtcccaaagattgttcaactgtcaaagtgaaactt 462 ||||| ||||||||||||||||| ||||||| ||||| || ||||| |||||||||| Sbjct: 1067 ctccatgagggtgaaggctatgagcgtcccagtgattgcacacttgtcagagtgaaactt 1126 Query: 463 attgggaagttggatgatggcaccatgtttgtaaagaaaggtcatgatggggaagagcca 522 ||||| ||||| || ||||| ||||| ||||| | | |||||||||||| || |||||| Sbjct: 1127 attggaaagttagaggatggtaccatatttgtcacaagaggtcatgatggtgacgagcca 1186 Query: 523 tttgagttcaagactgatgaggatcaggtgattgatgggcttgacaaaagcagtgcttag 582 || ||||| ||||||||||| || || ||| |||| ||||||||| |||||||| ||||| Sbjct: 1187 ttcgagtttaagactgatgaagaccaagtggttgaagggcttgac-aaagcagtacttag 1245 Query: 583 catgaagaaagg 594 |||||||||||| Sbjct: 1246 catgaagaaagg 1257
>gb|AY106502.1| Zea mays PCO063683 mRNA sequence Length = 559 Score = 157 bits (79), Expect = 5e-35 Identities = 178/211 (84%) Strand = Plus / Plus Query: 61 ggcgagaagtgggagaatcccaaagaccgtgatgaagtttttgttaaatatgaggcaagg 120 ||||| ||||||||||| |||| ||| | |||||||||| ||||||| ||||| |||||| Sbjct: 280 ggcgataagtgggagaaccccagagatcctgatgaagttgttgttaagtatgaagcaagg 339 Query: 121 cttgaggatgggactcttgttacaaaatctgatggcgttgagttcactgtgaaagaaggg 180 ||||||||||| || |||| | ||||||||||| |||||||||||||||| ||| || Sbjct: 340 cttgaggatggaacagttgtatcgaaatctgatggtgttgagttcactgtgagagatggc 399 Query: 181 catttctgccctgctgtatcgaaggctatcaagacaatgaagaagaatgagaaggccctc 240 ||||||||||| |||| |||||| ||||||| |||||||| || |||||||||| | Sbjct: 400 gtattctgccctgccatatcaaaggctgtcaagactatgaagaaaaacgagaaggcccac 459 Query: 241 cttacagtcaaaccacaatatggctttggtg 271 || || |||| ||||||||||||||||||| Sbjct: 460 ctcactgtcatgccacaatatggctttggtg 490
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 147 bits (74), Expect = 5e-32 Identities = 149/174 (85%) Strand = Plus / Minus Query: 260 atggctttggtgggcaaggcaggccagcttctagaggcgaagctgcagtcccccctaatg 319 ||||||| |||| ||||||||||||||| |||||| ||||||||| | |||||||||| Sbjct: 17258535 atggcttcggtgagcaaggcaggccagccgctagagatgaagctgcaataccccctaatg 17258476 Query: 320 ctatgttgcaaattgatcttcagttggtgtcctggaagacagtcactgagataggcaatg 379 ||| ||||| ||| ||||| | ||||||||||||||| ||||||||||||| || |||| Sbjct: 17258475 ctacattgcacattaatcttgaattggtgtcctggaaggcagtcactgagattggtaatg 17258416 Query: 380 acaagacgattctgaaaaagatcctccaggagggtgaaggctatgatcgtccca 433 | |||| || || || ||||||||||| ||||||||||||||||| ||||||| Sbjct: 17258415 ataagaaaatcctcaagaagatcctccatgagggtgaaggctatgagcgtccca 17258362 Score = 115 bits (58), Expect = 2e-22 Identities = 122/142 (85%), Gaps = 1/142 (0%) Strand = Plus / Minus Query: 453 agtgaaacttattgggaagttggatgatggcaccatgtttgtaaagaaaggtcatgatgg 512 ||||||||||||||| ||||| || ||||| ||||| ||||| | | |||||||||||| Sbjct: 17258237 agtgaaacttattggaaagttagaggatggtaccatatttgtcacaagaggtcatgatgg 17258178 Query: 513 ggaagagccatttgagttcaagactgatgaggatcaggtgattgatgggcttgacaaaag 572 || |||||||| ||||| ||||||||||| || || ||| |||| ||||||||| |||| Sbjct: 17258177 tgacgagccattcgagtttaagactgatgaagaccaagtggttgaagggcttgac-aaag 17258119 Query: 573 cagtgcttagcatgaagaaagg 594 |||| ||||||||||||||||| Sbjct: 17258118 cagtacttagcatgaagaaagg 17258097 Score = 101 bits (51), Expect = 3e-18 Identities = 75/83 (90%) Strand = Plus / Minus Query: 177 agggcatttctgccctgctgtatcgaaggctatcaagacaatgaagaagaatgagaaggc 236 |||||||||||| ||||| |||| |||||| | ||||| |||||||||||||||||||| Sbjct: 17258696 agggcatttctgtcctgccatatccaaggctgtgaagactatgaagaagaatgagaaggc 17258637 Query: 237 cctccttacagtcaaaccacaat 259 |||||| |||||||||||||||| Sbjct: 17258636 cctcctcacagtcaaaccacaat 17258614 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 103 gttaaatatgaggcaaggcttgaggatgggactcttgttacaaaatctgatggcgttgag 162 ||||| ||||||| |||||||||||||||||| |||| || |||||||||| || ||| Sbjct: 17258852 gttaagtatgaggtgaggcttgaggatgggactgttgtagcagaatctgatggtgtcgag 17258793 Query: 163 ttcactgtgaaaga 176 ||||| |||||||| Sbjct: 17258792 ttcaccgtgaaaga 17258779 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 43 aagaagatactagctgaaggcgagaagtgggagaatcccaaagaccgtgatgaagttttt 102 |||||| |||||||||||||| |||||||||||| || | |||||| |||||||||||| Sbjct: 17259001 aagaaggtactagctgaaggcacgaagtgggagaacccaagagaccgcgatgaagttttt 17258942 Query: 103 g 103 | Sbjct: 17258941 g 17258941
>dbj|AP005317.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0579G08 Length = 164452 Score = 147 bits (74), Expect = 5e-32 Identities = 149/174 (85%) Strand = Plus / Minus Query: 260 atggctttggtgggcaaggcaggccagcttctagaggcgaagctgcagtcccccctaatg 319 ||||||| |||| ||||||||||||||| |||||| ||||||||| | |||||||||| Sbjct: 31218 atggcttcggtgagcaaggcaggccagccgctagagatgaagctgcaataccccctaatg 31159 Query: 320 ctatgttgcaaattgatcttcagttggtgtcctggaagacagtcactgagataggcaatg 379 ||| ||||| ||| ||||| | ||||||||||||||| ||||||||||||| || |||| Sbjct: 31158 ctacattgcacattaatcttgaattggtgtcctggaaggcagtcactgagattggtaatg 31099 Query: 380 acaagacgattctgaaaaagatcctccaggagggtgaaggctatgatcgtccca 433 | |||| || || || ||||||||||| ||||||||||||||||| ||||||| Sbjct: 31098 ataagaaaatcctcaagaagatcctccatgagggtgaaggctatgagcgtccca 31045 Score = 115 bits (58), Expect = 2e-22 Identities = 122/142 (85%), Gaps = 1/142 (0%) Strand = Plus / Minus Query: 453 agtgaaacttattgggaagttggatgatggcaccatgtttgtaaagaaaggtcatgatgg 512 ||||||||||||||| ||||| || ||||| ||||| ||||| | | |||||||||||| Sbjct: 30920 agtgaaacttattggaaagttagaggatggtaccatatttgtcacaagaggtcatgatgg 30861 Query: 513 ggaagagccatttgagttcaagactgatgaggatcaggtgattgatgggcttgacaaaag 572 || |||||||| ||||| ||||||||||| || || ||| |||| ||||||||| |||| Sbjct: 30860 tgacgagccattcgagtttaagactgatgaagaccaagtggttgaagggcttgac-aaag 30802 Query: 573 cagtgcttagcatgaagaaagg 594 |||| ||||||||||||||||| Sbjct: 30801 cagtacttagcatgaagaaagg 30780 Score = 101 bits (51), Expect = 3e-18 Identities = 75/83 (90%) Strand = Plus / Minus Query: 177 agggcatttctgccctgctgtatcgaaggctatcaagacaatgaagaagaatgagaaggc 236 |||||||||||| ||||| |||| |||||| | ||||| |||||||||||||||||||| Sbjct: 31379 agggcatttctgtcctgccatatccaaggctgtgaagactatgaagaagaatgagaaggc 31320 Query: 237 cctccttacagtcaaaccacaat 259 |||||| |||||||||||||||| Sbjct: 31319 cctcctcacagtcaaaccacaat 31297 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 103 gttaaatatgaggcaaggcttgaggatgggactcttgttacaaaatctgatggcgttgag 162 ||||| ||||||| |||||||||||||||||| |||| || |||||||||| || ||| Sbjct: 31535 gttaagtatgaggtgaggcttgaggatgggactgttgtagcagaatctgatggtgtcgag 31476 Query: 163 ttcactgtgaaaga 176 ||||| |||||||| Sbjct: 31475 ttcaccgtgaaaga 31462 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 43 aagaagatactagctgaaggcgagaagtgggagaatcccaaagaccgtgatgaagttttt 102 |||||| |||||||||||||| |||||||||||| || | |||||| |||||||||||| Sbjct: 31684 aagaaggtactagctgaaggcacgaagtgggagaacccaagagaccgcgatgaagttttt 31625 Query: 103 g 103 | Sbjct: 31624 g 31624
>dbj|AP004864.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0048K16 Length = 159891 Score = 147 bits (74), Expect = 5e-32 Identities = 149/174 (85%) Strand = Plus / Minus Query: 260 atggctttggtgggcaaggcaggccagcttctagaggcgaagctgcagtcccccctaatg 319 ||||||| |||| ||||||||||||||| |||||| ||||||||| | |||||||||| Sbjct: 129302 atggcttcggtgagcaaggcaggccagccgctagagatgaagctgcaataccccctaatg 129243 Query: 320 ctatgttgcaaattgatcttcagttggtgtcctggaagacagtcactgagataggcaatg 379 ||| ||||| ||| ||||| | ||||||||||||||| ||||||||||||| || |||| Sbjct: 129242 ctacattgcacattaatcttgaattggtgtcctggaaggcagtcactgagattggtaatg 129183 Query: 380 acaagacgattctgaaaaagatcctccaggagggtgaaggctatgatcgtccca 433 | |||| || || || ||||||||||| ||||||||||||||||| ||||||| Sbjct: 129182 ataagaaaatcctcaagaagatcctccatgagggtgaaggctatgagcgtccca 129129 Score = 115 bits (58), Expect = 2e-22 Identities = 122/142 (85%), Gaps = 1/142 (0%) Strand = Plus / Minus Query: 453 agtgaaacttattgggaagttggatgatggcaccatgtttgtaaagaaaggtcatgatgg 512 ||||||||||||||| ||||| || ||||| ||||| ||||| | | |||||||||||| Sbjct: 129004 agtgaaacttattggaaagttagaggatggtaccatatttgtcacaagaggtcatgatgg 128945 Query: 513 ggaagagccatttgagttcaagactgatgaggatcaggtgattgatgggcttgacaaaag 572 || |||||||| ||||| ||||||||||| || || ||| |||| ||||||||| |||| Sbjct: 128944 tgacgagccattcgagtttaagactgatgaagaccaagtggttgaagggcttgac-aaag 128886 Query: 573 cagtgcttagcatgaagaaagg 594 |||| ||||||||||||||||| Sbjct: 128885 cagtacttagcatgaagaaagg 128864 Score = 101 bits (51), Expect = 3e-18 Identities = 75/83 (90%) Strand = Plus / Minus Query: 177 agggcatttctgccctgctgtatcgaaggctatcaagacaatgaagaagaatgagaaggc 236 |||||||||||| ||||| |||| |||||| | ||||| |||||||||||||||||||| Sbjct: 129463 agggcatttctgtcctgccatatccaaggctgtgaagactatgaagaagaatgagaaggc 129404 Query: 237 cctccttacagtcaaaccacaat 259 |||||| |||||||||||||||| Sbjct: 129403 cctcctcacagtcaaaccacaat 129381 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 103 gttaaatatgaggcaaggcttgaggatgggactcttgttacaaaatctgatggcgttgag 162 ||||| ||||||| |||||||||||||||||| |||| || |||||||||| || ||| Sbjct: 129619 gttaagtatgaggtgaggcttgaggatgggactgttgtagcagaatctgatggtgtcgag 129560 Query: 163 ttcactgtgaaaga 176 ||||| |||||||| Sbjct: 129559 ttcaccgtgaaaga 129546 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 43 aagaagatactagctgaaggcgagaagtgggagaatcccaaagaccgtgatgaagttttt 102 |||||| |||||||||||||| |||||||||||| || | |||||| |||||||||||| Sbjct: 129768 aagaaggtactagctgaaggcacgaagtgggagaacccaagagaccgcgatgaagttttt 129709 Query: 103 g 103 | Sbjct: 129708 g 129708
>ref|NM_113429.3| Arabidopsis thaliana ROF1 (ROTAMASE FKBP 1); FK506 binding / calmodulin binding / peptidyl-prolyl cis-trans isomerase AT3G25230 (ROF1) mRNA, complete cds Length = 1974 Score = 123 bits (62), Expect = 7e-25 Identities = 188/230 (81%) Strand = Plus / Plus Query: 40 tttaagaagatactagctgaaggcgagaagtgggagaatcccaaagaccgtgatgaagtt 99 ||||||||||| || |||| || ||||||||||||||||| || |||| |||||||||| Sbjct: 519 tttaagaagattcttgctgttggagagaagtgggagaatccaaaggaccttgatgaagtt 578 Query: 100 tttgttaaatatgaggcaaggcttgaggatgggactcttgttacaaaatctgatggcgtt 159 ||||||| | |||||| | ||||||||||| ||| ||||| ||||||||||| || Sbjct: 579 cttgttaagtttgaggcgaaacttgaggatggtactgttgttgggaaatctgatggtgtg 638 Query: 160 gagttcactgtgaaagaagggcatttctgccctgctgtatcgaaggctatcaagacaatg 219 ||||||||||| ||||| || |||||||||||||| | | |||||| | || || ||| Sbjct: 639 gagttcactgttaaagatggtcatttctgccctgcacttactaaggctgtgaaaactatg 698 Query: 220 aagaagaatgagaaggccctccttacagtcaaaccacaatatggctttgg 269 || ||| ||| |||| ||| || ||||| |||||||||||||| ||||| Sbjct: 699 aaaaagggtgaaaaggtccttctgacagttaaaccacaatatggttttgg 748
>gb|U49453.1|ATU49453 Arabidopsis thaliana FK506 binding protein FKBP62 (ROF1) mRNA, complete cds Length = 1934 Score = 123 bits (62), Expect = 7e-25 Identities = 188/230 (81%) Strand = Plus / Plus Query: 40 tttaagaagatactagctgaaggcgagaagtgggagaatcccaaagaccgtgatgaagtt 99 ||||||||||| || |||| || ||||||||||||||||| || |||| |||||||||| Sbjct: 470 tttaagaagattcttgctgttggagagaagtgggagaatccaaaggaccttgatgaagtt 529 Query: 100 tttgttaaatatgaggcaaggcttgaggatgggactcttgttacaaaatctgatggcgtt 159 ||||||| | |||||| | ||||||||||| ||| ||||| ||||||||||| || Sbjct: 530 cttgttaagtttgaggcgaaacttgaggatggtactgttgttgggaaatctgatggtgtg 589 Query: 160 gagttcactgtgaaagaagggcatttctgccctgctgtatcgaaggctatcaagacaatg 219 ||||||||||| ||||| || |||||||||||||| | | |||||| | || || ||| Sbjct: 590 gagttcactgttaaagatggtcatttctgccctgcacttactaaggctgtgaaaactatg 649 Query: 220 aagaagaatgagaaggccctccttacagtcaaaccacaatatggctttgg 269 || ||| ||| |||| ||| || ||||| |||||||||||||| ||||| Sbjct: 650 aaaaagggtgaaaaggtccttctgacagttaaaccacaatatggttttgg 699
>ref|XM_472023.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1758 Score = 99.6 bits (50), Expect = 1e-17 Identities = 146/178 (82%) Strand = Plus / Plus Query: 145 aaatctgatggcgttgagttcactgtgaaagaagggcatttctgccctgctgtatcgaag 204 |||||||| || |||||||| |||| ||||| || |||||||||| || | || ||| Sbjct: 607 aaatctgacggtgttgagtttgctgtcaaagatggctatttctgcccggcgctttcaaag 666 Query: 205 gctatcaagacaatgaagaagaatgagaaggccctccttacagtcaaaccacaatatggc 264 ||| ||||||| ||||||||| ||||||| |||||| || ||||| |||||||||||| Sbjct: 667 gctgtcaagacgatgaagaagggcgagaaggtcctcctcactgtcaagccacaatatggc 726 Query: 265 tttggtgggcaaggcaggccagcttctagaggcgaagctgcagtcccccctaatgcta 322 ||||||| |||||||| ||||||||| ||| |||||||| || || || ||||||| Sbjct: 727 tttggtgagcaaggcaaaccagcttctggagctgaagctgctgtgccgccaaatgcta 784 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 496 aagaaaggtcatgatggggaagagccatttgagttcaagactgatgagga 545 |||||||| |||||||| || |||||||||||||||| ||| |||||||| Sbjct: 958 aagaaagggcatgatggtgatgagccatttgagttcaggacagatgagga 1007
>gb|AF140495.2| Oryza sativa (japonica cultivar-group) FK506-binding protein mRNA, complete cds Length = 2233 Score = 99.6 bits (50), Expect = 1e-17 Identities = 146/178 (82%) Strand = Plus / Plus Query: 145 aaatctgatggcgttgagttcactgtgaaagaagggcatttctgccctgctgtatcgaag 204 |||||||| || |||||||| |||| ||||| || |||||||||| || | || ||| Sbjct: 690 aaatctgacggtgttgagtttgctgtcaaagatggctatttctgcccggcgctttcaaag 749 Query: 205 gctatcaagacaatgaagaagaatgagaaggccctccttacagtcaaaccacaatatggc 264 ||| ||||||| ||||||||| ||||||| |||||| || ||||| |||||||||||| Sbjct: 750 gctgtcaagacgatgaagaagggcgagaaggtcctcctcactgtcaagccacaatatggc 809 Query: 265 tttggtgggcaaggcaggccagcttctagaggcgaagctgcagtcccccctaatgcta 322 ||||||| |||||||| ||||||||| ||| |||||||| || || || ||||||| Sbjct: 810 tttggtgagcaaggcaaaccagcttctggagctgaagctgctgtgccgccaaatgcta 867 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 496 aagaaaggtcatgatggggaagagccatttgagttcaagactgatgagga 545 |||||||| |||||||| || |||||||||||||||| ||| |||||||| Sbjct: 1041 aagaaagggcatgatggtgatgagccatttgagttcaggacagatgagga 1090
>dbj|AK100844.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023123G09, full insert sequence Length = 2162 Score = 99.6 bits (50), Expect = 1e-17 Identities = 146/178 (82%) Strand = Plus / Plus Query: 145 aaatctgatggcgttgagttcactgtgaaagaagggcatttctgccctgctgtatcgaag 204 |||||||| || |||||||| |||| ||||| || |||||||||| || | || ||| Sbjct: 693 aaatctgacggtgttgagtttgctgtcaaagatggctatttctgcccggcgctttcaaag 752 Query: 205 gctatcaagacaatgaagaagaatgagaaggccctccttacagtcaaaccacaatatggc 264 ||| ||||||| ||||||||| ||||||| |||||| || ||||| |||||||||||| Sbjct: 753 gctgtcaagacgatgaagaagggcgagaaggtcctcctcactgtcaagccacaatatggc 812 Query: 265 tttggtgggcaaggcaggccagcttctagaggcgaagctgcagtcccccctaatgcta 322 ||||||| |||||||| ||||||||| ||| |||||||| || || || ||||||| Sbjct: 813 tttggtgagcaaggcaaaccagcttctggagctgaagctgctgtgccgccaaatgcta 870 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 496 aagaaaggtcatgatggggaagagccatttgagttcaagactgatgagga 545 |||||||| |||||||| || |||||||||||||||| ||| |||||||| Sbjct: 1044 aagaaagggcatgatggtgatgagccatttgagttcaggacagatgagga 1093
>ref|XM_483423.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2100 Score = 61.9 bits (31), Expect = 2e-06 Identities = 88/107 (82%) Strand = Plus / Plus Query: 70 tgggagaatcccaaagaccgtgatgaagtttttgttaaatatgaggcaaggcttgaggat 129 |||||||| || ||||| | ||||||||| ||||| ||||||||||| ||||||||||| Sbjct: 627 tgggagaacccaaaagatcttgatgaagtatttgtgaaatatgaggctcggcttgaggat 686 Query: 130 gggactcttgttacaaaatctgatggcgttgagttcactgtgaaaga 176 || ||| || | |||| ||||| |||| ||| || ||||| ||||| Sbjct: 687 ggcactgttatatcaaagtctgagggcgctgaatttactgttaaaga 733 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 516 agagccatttgagttcaagactgatgaggatcaggtgattgatgg 560 |||||||||||| |||||||||||||| || |||| |||||||| Sbjct: 1073 agagccatttgaattcaagactgatgaagaggaggtcattgatgg 1117
>dbj|AK103172.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033121G16, full insert sequence Length = 2100 Score = 61.9 bits (31), Expect = 2e-06 Identities = 88/107 (82%) Strand = Plus / Plus Query: 70 tgggagaatcccaaagaccgtgatgaagtttttgttaaatatgaggcaaggcttgaggat 129 |||||||| || ||||| | ||||||||| ||||| ||||||||||| ||||||||||| Sbjct: 627 tgggagaacccaaaagatcttgatgaagtatttgtgaaatatgaggctcggcttgaggat 686 Query: 130 gggactcttgttacaaaatctgatggcgttgagttcactgtgaaaga 176 || ||| || | |||| ||||| |||| ||| || ||||| ||||| Sbjct: 687 ggcactgttatatcaaagtctgagggcgctgaatttactgttaaaga 733 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 516 agagccatttgagttcaagactgatgaggatcaggtgattgatgg 560 |||||||||||| |||||||||||||| || |||| |||||||| Sbjct: 1073 agagccatttgaattcaagactgatgaagaggaggtcattgatgg 1117
>emb|AL731624.3|OSJN00266 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0091C07, complete sequence Length = 138383 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 496 aagaaaggtcatgatggggaagagccatttgagttcaagactgatgagga 545 |||||||| |||||||| || |||||||||||||||| ||| |||||||| Sbjct: 76550 aagaaagggcatgatggtgatgagccatttgagttcaggacagatgagga 76501 Score = 46.1 bits (23), Expect = 0.13 Identities = 53/63 (84%) Strand = Plus / Minus Query: 260 atggctttggtgggcaaggcaggccagcttctagaggcgaagctgcagtcccccctaatg 319 |||||||||||| |||||||| ||||||||| ||| |||||||| || || || |||| Sbjct: 76884 atggctttggtgagcaaggcaaaccagcttctggagctgaagctgctgtgccgccaaatg 76825 Query: 320 cta 322 ||| Sbjct: 76824 cta 76822
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 496 aagaaaggtcatgatggggaagagccatttgagttcaagactgatgagga 545 |||||||| |||||||| || |||||||||||||||| ||| |||||||| Sbjct: 16826119 aagaaagggcatgatggtgatgagccatttgagttcaggacagatgagga 16826070 Score = 46.1 bits (23), Expect = 0.13 Identities = 53/63 (84%) Strand = Plus / Minus Query: 260 atggctttggtgggcaaggcaggccagcttctagaggcgaagctgcagtcccccctaatg 319 |||||||||||| |||||||| ||||||||| ||| |||||||| || || || |||| Sbjct: 16826453 atggctttggtgagcaaggcaaaccagcttctggagctgaagctgctgtgccgccaaatg 16826394 Query: 320 cta 322 ||| Sbjct: 16826393 cta 16826391 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 440 gttcaactgtcaaagtgaaac 460 ||||||||||||||||||||| Sbjct: 26010705 gttcaactgtcaaagtgaaac 26010725
>ref|NM_124233.2| Arabidopsis thaliana FK506 binding / calmodulin binding / peptidyl-prolyl cis-trans isomerase AT5G48570 mRNA, complete cds Length = 2130 Score = 58.0 bits (29), Expect = 3e-05 Identities = 101/125 (80%) Strand = Plus / Plus Query: 70 tgggagaatcccaaagaccgtgatgaagtttttgttaaatatgaggcaaggcttgaggat 129 |||||||| || ||||||| ||||||||||| || || ||||| || ||||||||||| Sbjct: 712 tgggagaagccaaaagaccttgatgaagtttacgtcaagtatgaagctcggcttgaggat 771 Query: 130 gggactcttgttacaaaatctgatggcgttgagttcactgtgaaagaagggcatttctgc 189 || || ||||| ||| |||||||| || ||||| ||||| || || || |||||||| Sbjct: 772 ggcaccattgttggaaagtctgatggtgtagagtttactgtcaaggagggccatttctgt 831 Query: 190 cctgc 194 ||||| Sbjct: 832 cctgc 836
>emb|X86903.1|TAFKBP70 T.aestivum mRNA for peptidylprolyl cis-trans isomerase, FK506 Length = 2027 Score = 58.0 bits (29), Expect = 3e-05 Identities = 86/105 (81%) Strand = Plus / Plus Query: 90 tgatgaagtttttgttaaatatgaggcaaggcttgaggatgggactcttgttacaaaatc 149 ||||||||| ||||| ||||||||||| ||||||||||||| ||| |||| | || || Sbjct: 630 tgatgaagtatttgtgaaatatgaggctcggcttgaggatggtactgttgtgtccaagtc 689 Query: 150 tgatggcgttgagttcactgtgaaagaagggcatttctgccctgc 194 ||| || ||||| || ||||| ||||| || || |||||||||| Sbjct: 690 tgagggggttgaatttactgttaaagatggacacctctgccctgc 734 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 515 aagagccatttgagttcaagactgatga 542 ||||||||||||| || ||||||||||| Sbjct: 1055 aagagccatttgaatttaagactgatga 1082
>emb|BX831626.1|CNS0A0YB Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH1ZC07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1890 Score = 58.0 bits (29), Expect = 3e-05 Identities = 101/125 (80%) Strand = Plus / Plus Query: 70 tgggagaatcccaaagaccgtgatgaagtttttgttaaatatgaggcaaggcttgaggat 129 |||||||| || ||||||| ||||||||||| || || ||||| || ||||||||||| Sbjct: 582 tgggagaagccaaaagaccttgatgaagtttacgtcaagtatgaagctcggcttgaggat 641 Query: 130 gggactcttgttacaaaatctgatggcgttgagttcactgtgaaagaagggcatttctgc 189 || || ||||| ||| |||||||| || ||||| ||||| || || || |||||||| Sbjct: 642 ggcaccattgttggaaagtctgatggtgtagagtttactgtcaaggagggccatttctgt 701 Query: 190 cctgc 194 ||||| Sbjct: 702 cctgc 706
>dbj|AB026647.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MJL12 Length = 81542 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 40 tttaagaagatactagctgaaggcgagaagtgggagaatcccaaagaccgtgatgaagtt 99 ||||||||||| || |||| || ||||||||||||||||| || |||| |||||||||| Sbjct: 57913 tttaagaagattcttgctgttggagagaagtgggagaatccaaaggaccttgatgaagtt 57972 Score = 48.1 bits (24), Expect = 0.033 Identities = 48/56 (85%) Strand = Plus / Plus Query: 121 cttgaggatgggactcttgttacaaaatctgatggcgttgagttcactgtgaaaga 176 ||||||||||| ||| ||||| ||||||||||| || ||||||||||| ||||| Sbjct: 58082 cttgaggatggtactgttgttgggaaatctgatggtgtggagttcactgttaaaga 58137
>gb|U57838.1|ATU57838 Arabidopsis thaliana FK506 binding protein FKBP62 (ROF1) gene, complete cds Length = 4029 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 40 tttaagaagatactagctgaaggcgagaagtgggagaatcccaaagaccgtgatgaagtt 99 ||||||||||| || |||| || ||||||||||||||||| || |||| |||||||||| Sbjct: 1227 tttaagaagattcttgctgttggagagaagtgggagaatccaaaggaccttgatgaagtt 1286 Score = 48.1 bits (24), Expect = 0.033 Identities = 48/56 (85%) Strand = Plus / Plus Query: 121 cttgaggatgggactcttgttacaaaatctgatggcgttgagttcactgtgaaaga 176 ||||||||||| ||| ||||| ||||||||||| || ||||||||||| ||||| Sbjct: 1394 cttgaggatggtactgttgttgggaaatctgatggtgtggagttcactgttaaaga 1449
>gb|AY104504.1| Zea mays PCO127462 mRNA sequence Length = 2108 Score = 52.0 bits (26), Expect = 0.002 Identities = 129/162 (79%), Gaps = 1/162 (0%) Strand = Plus / Plus Query: 15 gacatttgcaaagnatggcagcatatttaagaagatactagctgaaggcgagaagtggga 74 ||||||||||||| ||||| ||||||| |||||||| || || || ||||| ||||| Sbjct: 603 gacatttgcaaag-atggcggcatattcaagaagatccttaaagagggagagaaatggga 661 Query: 75 gaatcccaaagaccgtgatgaagtttttgttaaatatgaggcaaggcttgaggatgggac 134 ||| || || || | ||||||||| |||| ||||||||||| | || || ||||| || Sbjct: 662 gaacccaaaggatcctgatgaagtacttgtgaaatatgaggcccgtctggaagatggtac 721 Query: 135 tcttgttacaaaatctgatggcgttgagttcactgtgaaaga 176 | |||| | || ||||| || |||||||| ||||||||||| Sbjct: 722 tgttgtatccaagtctgagggggttgagtttactgtgaaaga 763
>gb|AY389590.1| Hyacinthus orientalis peptidyl-prolyl cis-trans isomerase mRNA, partial cds Length = 648 Score = 48.1 bits (24), Expect = 0.033 Identities = 66/80 (82%) Strand = Plus / Plus Query: 145 aaatctgatggcgttgagttcactgtgaaagaagggcatttctgccctgctgtatcgaag 204 |||||||||| ||||| ||||| || ||||| ||| | ||||| ||||| || | ||| Sbjct: 14 aaatctgatgaagttgaattcacggttaaagatgggtacttctgtcctgcgctagctaag 73 Query: 205 gctatcaagacaatgaagaa 224 ||| |||||||||||||||| Sbjct: 74 gctgtcaagacaatgaagaa 93
>emb|Z82286.1|CEW02A2 Caenorhabditis elegans Cosmid W02A2, complete sequence Length = 35879 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Minus Query: 207 tatcaagacaatgaagaagaatgagaag 234 ||||||||||||||| |||||||||||| Sbjct: 24561 tatcaagacaatgaaaaagaatgagaag 24534
>emb|Y07636.1|TAFKBP77 T.aestivum mRNA for peptidylprolyl isomerase Length = 1999 Score = 48.1 bits (24), Expect = 0.033 Identities = 57/68 (83%) Strand = Plus / Plus Query: 211 aagacaatgaagaagaatgagaaggccctccttacagtcaaaccacaatatggctttggt 270 ||||| ||||||||| ||||||| |||||| || ||||| ||||||||||| ||||| Sbjct: 709 aagaccatgaagaagggcgagaaggtcctcctgaccgtcaagccacaatatggttttggc 768 Query: 271 gggcaagg 278 | |||||| Sbjct: 769 gagcaagg 776 Score = 40.1 bits (20), Expect = 8.1 Identities = 47/56 (83%) Strand = Plus / Plus Query: 496 aagaaaggtcatgatggggaagagccatttgagttcaagactgatgaggatcaggt 551 |||||||| ||||| || || || ||||| ||||||||||| || ||||| ||||| Sbjct: 994 aagaaaggacatgaaggcgacgaaccattcgagttcaagacggacgaggagcaggt 1049
>gb|AC153129.20| Medicago truncatula clone mth2-103o2, complete sequence Length = 111951 Score = 48.1 bits (24), Expect = 0.033 Identities = 45/52 (86%) Strand = Plus / Plus Query: 103 gttaaatatgaggcaaggcttgaggatgggactcttgttacaaaatctgatg 154 ||||| ||||| ||| | ||||| ||||| |||||||||| ||||||||||| Sbjct: 102678 gttaagtatgaagcacgtcttgatgatggaactcttgttaaaaaatctgatg 102729 Score = 44.1 bits (22), Expect = 0.52 Identities = 31/34 (91%) Strand = Plus / Plus Query: 121 cttgaggatgggactcttgttacaaaatctgatg 154 ||||| ||||| |||||||||| ||||||||||| Sbjct: 88237 cttgatgatggaactcttgttagaaaatctgatg 88270
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 516 agagccatttgagttcaagactgatga 542 |||||||||||| |||||||||||||| Sbjct: 26134154 agagccatttgaattcaagactgatga 26134180
>dbj|AP003888.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1191_A10 Length = 140643 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 516 agagccatttgagttcaagactgatga 542 |||||||||||| |||||||||||||| Sbjct: 78085 agagccatttgaattcaagactgatga 78111
>gb|BT012788.1| Lycopersicon esculentum clone 113780F, mRNA sequence Length = 2264 Score = 44.1 bits (22), Expect = 0.52 Identities = 40/46 (86%) Strand = Plus / Plus Query: 523 tttgagttcaagactgatgaggatcaggtgattgatgggcttgaca 568 |||||||| ||||| |||||||| || || ||||||||||| |||| Sbjct: 1167 tttgagtttaagacagatgaggaacaagtaattgatgggctggaca 1212
>ref|NG_000839.1| Homo sapiens cystatin locus (CST@) on chromosome 20 Length = 477159 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 148 tctgatggcgttgagttcactg 169 |||||||||||||||||||||| Sbjct: 309063 tctgatggcgttgagttcactg 309042
>gb|AC126793.13| Medicago truncatula clone mth2-17m16, complete sequence Length = 109787 Score = 44.1 bits (22), Expect = 0.52 Identities = 31/34 (91%) Strand = Plus / Plus Query: 121 cttgaggatgggactcttgttacaaaatctgatg 154 ||||| ||||| |||||||||| ||||||||||| Sbjct: 47591 cttgatgatggaactcttgttagaaaatctgatg 47624
>emb|AL121894.26|HSA218C14 Human DNA sequence from clone RP11-218C14 on chromosome 20 Contains the 3' end of a novel gene, two genes for novel proteins similar to cystatin 9-like (mouse) (CST9L), the CST9L gene for cystatin 9-like (mouse), a cystatin 9-like (mouse) pseudogene, the CST3 gene for cystatin C, a novel gene and a CpG island, complete sequence Length = 141079 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 148 tctgatggcgttgagttcactg 169 |||||||||||||||||||||| Sbjct: 76953 tctgatggcgttgagttcactg 76974
>gb|AC021017.4|AC021017 Homo sapiens BAC clone RP11-382E10 from 8, complete sequence Length = 182988 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 142 acaaaatctgatggcgttgagt 163 |||||||||||||||||||||| Sbjct: 78683 acaaaatctgatggcgttgagt 78662
>ref|XM_473208.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 948 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 440 gttcaactgtcaaagtgaaac 460 ||||||||||||||||||||| Sbjct: 805 gttcaactgtcaaagtgaaac 785
>gb|DQ058627.1| Rhododendron macrophyllum RNA polymerase II second largest subunit (RPB2) mRNA, complete cds Length = 4214 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 494 taaagaaaggtcatgatggggaaga 518 ||||||||||||||||||| ||||| Sbjct: 693 taaagaaaggtcatgatggtgaaga 717
>dbj|AB015471.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K9B18 Length = 10085 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 543 ggatcaggtgattgatgggcttgac 567 ||||||||||||||||| ||||||| Sbjct: 6104 ggatcaggtgattgatgagcttgac 6080
>dbj|AK102988.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033116C14, full insert sequence Length = 1432 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 440 gttcaactgtcaaagtgaaac 460 ||||||||||||||||||||| Sbjct: 999 gttcaactgtcaaagtgaaac 979
>dbj|AK073454.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033042J02, full insert sequence Length = 3038 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 440 gttcaactgtcaaagtgaaac 460 ||||||||||||||||||||| Sbjct: 2605 gttcaactgtcaaagtgaaac 2585
>emb|AL662958.3|OSJN00156 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0019D11, complete sequence Length = 163039 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 440 gttcaactgtcaaagtgaaac 460 ||||||||||||||||||||| Sbjct: 45032 gttcaactgtcaaagtgaaac 45052
>emb|AL731629.2|OSJN00274 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0061C13, complete sequence Length = 139226 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 440 gttcaactgtcaaagtgaaac 460 ||||||||||||||||||||| Sbjct: 136967 gttcaactgtcaaagtgaaac 136987
>gb|AC148987.3| Mus musculus BAC clone RP24-322F4 from 6, complete sequence Length = 222379 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 219 gaagaagaatgagaaggccct 239 ||||||||||||||||||||| Sbjct: 142420 gaagaagaatgagaaggccct 142440
>gb|AC145958.3| Gallus gallus BAC clone CH261-16J12 from chromosome unknown, complete sequence Length = 207441 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 544 gatcaggtgattgatgggctt 564 ||||||||||||||||||||| Sbjct: 178480 gatcaggtgattgatgggctt 178500
>gb|AC121510.10| Mus musculus chromosome 19, clone RP24-371N19, complete sequence Length = 168677 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 tatgaggcaaggcttgagga 128 |||||||||||||||||||| Sbjct: 66739 tatgaggcaaggcttgagga 66758
>gb|AC124475.3| Mus musculus BAC clone RP24-92F8 from chromosome 8, complete sequence Length = 212858 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 459 acttattgggaagttggatg 478 |||||||||||||||||||| Sbjct: 27672 acttattgggaagttggatg 27691
>gb|AC165155.2| Mus musculus BAC clone RP23-293N22 from chromosome 14, complete sequence Length = 226292 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 210 caagacaatgaagaagaatgagaa 233 ||||||||||||||| |||||||| Sbjct: 173090 caagacaatgaagaataatgagaa 173113
>ref|XM_949047.1| Theileria annulata strain Ankara hypothetical protein (TA02995) partial mRNA Length = 4953 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 516 agagccatttgagttcaagactga 539 ||||||| |||||||||||||||| Sbjct: 957 agagccagttgagttcaagactga 980
>gb|AC136740.10| Mus musculus chromosome 7, clone RP23-137A24, complete sequence Length = 219863 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 ggtgtcctggaagacagtca 364 |||||||||||||||||||| Sbjct: 128059 ggtgtcctggaagacagtca 128078
>emb|AL442126.6| Human DNA sequence from clone RP11-409J23 on chromosome 13, complete sequence Length = 133789 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 aagtttttgttaaatatgag 114 |||||||||||||||||||| Sbjct: 41063 aagtttttgttaaatatgag 41082
>emb|AL139341.9| Human DNA sequence from clone RP11-99N20 on chromosome 10 Contains the 5' end of a novel gene, the gene for glutathione transferase omega 1 (GSTO1), the 5' end of a variant of the gene for a novel glutathione-S-transferase and two CpG islands, complete sequence Length = 104378 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 aatgaagaagaatgagaagg 235 |||||||||||||||||||| Sbjct: 73024 aatgaagaagaatgagaagg 73043
>gb|AC032019.7| Homo sapiens chromosome 17, clone RP11-277J6, complete sequence Length = 172709 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 ggcaaggcaggccagcttct 291 |||||||||||||||||||| Sbjct: 91383 ggcaaggcaggccagcttct 91402
>gb|AC160129.2| Mus musculus BAC clone RP23-253N17 from chromosome 9, complete sequence Length = 205094 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 433 aaagattgttcaactgtcaa 452 |||||||||||||||||||| Sbjct: 11665 aaagattgttcaactgtcaa 11684
>gb|DP000056.1| Pan troglodytes chromosome Y chry_random_3 genomic scaffold Length = 331329 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 298 gaagctgcagtcccccctaatgct 321 ||||||||||||| |||||||||| Sbjct: 288349 gaagctgcagtcctccctaatgct 288372
>gb|AC004450.3| Arabidopsis thaliana chromosome 2 clone F14B2 map CIC10F02, complete sequence Length = 90283 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 atgaagtttttgttaaatat 111 |||||||||||||||||||| Sbjct: 29172 atgaagtttttgttaaatat 29191
>gb|AC172372.2| Pan troglodytes BAC clone CH251-1067L6 from chromosome y, complete sequence Length = 192570 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 298 gaagctgcagtcccccctaatgct 321 ||||||||||||| |||||||||| Sbjct: 131012 gaagctgcagtcctccctaatgct 130989
>dbj|AK084608.1| Mus musculus 13 days embryo heart cDNA, RIKEN full-length enriched library, clone:D330021F09 product:unclassifiable, full insert sequence Length = 2377 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 tatgaggcaaggcttgagga 128 |||||||||||||||||||| Sbjct: 2251 tatgaggcaaggcttgagga 2232
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 482 gcaccatgtttgtaaagaaa 501 |||||||||||||||||||| Sbjct: 22051172 gcaccatgtttgtaaagaaa 22051153
>gb|AC007342.6| Homo sapiens chromosome 16 clone RP11-44F14, complete sequence Length = 177788 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 569 aaagcagtgcttagcatgaa 588 |||||||||||||||||||| Sbjct: 116620 aaagcagtgcttagcatgaa 116601
>gb|AC175060.2| Pan troglodytes BAC clone CH251-724O9 from chromosome y, complete sequence Length = 196548 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 298 gaagctgcagtcccccctaatgct 321 ||||||||||||| |||||||||| Sbjct: 145505 gaagctgcagtcctccctaatgct 145528
>gb|AC007345.5|AC007345 Homo sapiens chromosome 16 clone RP11-466N18, complete sequence Length = 188863 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 569 aaagcagtgcttagcatgaa 588 |||||||||||||||||||| Sbjct: 169403 aaagcagtgcttagcatgaa 169422
>gb|AC172373.3| Pan troglodytes BAC clone CH251-1081D19 from chromosome y, complete sequence Length = 194913 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 298 gaagctgcagtcccccctaatgct 321 ||||||||||||| |||||||||| Sbjct: 74976 gaagctgcagtcctccctaatgct 74953
>ref|XM_218816.3| PREDICTED: Rattus norvegicus mannosidase 2, alpha 2 (predicted) (Man2a2_predicted), mRNA Length = 4341 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 ggtgtcctggaagacagtca 364 |||||||||||||||||||| Sbjct: 4086 ggtgtcctggaagacagtca 4067
>gb|AC163726.3| Pan troglodytes BAC clone CH251-653B19 from chromosome y, complete sequence Length = 207364 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 298 gaagctgcagtcccccctaatgct 321 ||||||||||||| |||||||||| Sbjct: 164386 gaagctgcagtcctccctaatgct 164409
>dbj|AP005396.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0635G10 Length = 146728 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 482 gcaccatgtttgtaaagaaa 501 |||||||||||||||||||| Sbjct: 93236 gcaccatgtttgtaaagaaa 93217
>gb|AC114598.9| Mus musculus chromosome 8, clone RP23-301G13, complete sequence Length = 211410 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 459 acttattgggaagttggatg 478 |||||||||||||||||||| Sbjct: 20521 acttattgggaagttggatg 20502
>gb|AC154619.2| Mus musculus BAC clone RP23-322I21 from 16, complete sequence Length = 191616 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 492 tgtaaagaaaggtcatgatggggaagag 519 ||||||||||||||| |||| ||||||| Sbjct: 18004 tgtaaagaaaggtcaagatgaggaagag 17977
>gb|AC175059.2| Pan troglodytes BAC clone CH251-777D16 from chromosome y, complete sequence Length = 166448 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 298 gaagctgcagtcccccctaatgct 321 ||||||||||||| |||||||||| Sbjct: 78058 gaagctgcagtcctccctaatgct 78035 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,233,947 Number of Sequences: 3902068 Number of extensions: 6233947 Number of successful extensions: 118585 Number of sequences better than 10.0: 65 Number of HSP's better than 10.0 without gapping: 66 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 118282 Number of HSP's gapped (non-prelim): 294 length of query: 594 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 571 effective length of database: 17,143,297,704 effective search space: 9788822988984 effective search space used: 9788822988984 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)