ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal9f16 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 135 bits (68), Expect = 2e-28 Identities = 128/148 (86%) Strand = Plus / Minus Query: 371 tgacatggctcgtagcctatccgtgacctcagtgaacgaggggcggatatcgggattggc 430 |||||||||||||||||| || |||||||| ||||| ||||||||||| || |||| ||| Sbjct: 24983831 tgacatggctcgtagcctgtcggtgacctccgtgaatgaggggcggatgtcaggatcggc 24983772 Query: 431 cgaccaacattgctccatcagtattcgccattcagggtcacaggtttcaggtactggagg 490 |||||| ||||||||||||||| |||||||||||| || ||| ||| |||| ||||| Sbjct: 24983771 cgaccagcattgctccatcagttgtcgccattcaggctcgcagtttttgggtatcggagg 24983712 Query: 491 ccggagagagttgttcacgataccgcct 518 ||| |||| |||||| |||||||||||| Sbjct: 24983711 ccgaagagtgttgttgacgataccgcct 24983684 Score = 83.8 bits (42), Expect = 6e-13 Identities = 63/70 (90%) Strand = Plus / Minus Query: 516 cctatgatagcgccgcaatgcatatttgcgtatggttcctcacccgtcaagatttcccat 575 |||||||||||||| || |||||||||||||| ||||||||||| |||||||| ||||| Sbjct: 24983497 cctatgatagcgccacagtgcatatttgcgtacggttcctcaccagtcaagatctcccac 24983438 Query: 576 aatgctatcc 585 || ||||||| Sbjct: 24983437 aaagctatcc 24983428
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 135 bits (68), Expect = 2e-28 Identities = 128/148 (86%) Strand = Plus / Minus Query: 371 tgacatggctcgtagcctatccgtgacctcagtgaacgaggggcggatatcgggattggc 430 |||||||||||||||||| || |||||||| ||||| ||||||||||| || |||| ||| Sbjct: 24912037 tgacatggctcgtagcctgtcggtgacctccgtgaatgaggggcggatgtcaggatcggc 24911978 Query: 431 cgaccaacattgctccatcagtattcgccattcagggtcacaggtttcaggtactggagg 490 |||||| ||||||||||||||| |||||||||||| || ||| ||| |||| ||||| Sbjct: 24911977 cgaccagcattgctccatcagttgtcgccattcaggctcgcagtttttgggtatcggagg 24911918 Query: 491 ccggagagagttgttcacgataccgcct 518 ||| |||| |||||| |||||||||||| Sbjct: 24911917 ccgaagagtgttgttgacgataccgcct 24911890 Score = 83.8 bits (42), Expect = 6e-13 Identities = 63/70 (90%) Strand = Plus / Minus Query: 516 cctatgatagcgccgcaatgcatatttgcgtatggttcctcacccgtcaagatttcccat 575 |||||||||||||| || |||||||||||||| ||||||||||| |||||||| ||||| Sbjct: 24911703 cctatgatagcgccacagtgcatatttgcgtacggttcctcaccagtcaagatctcccac 24911644 Query: 576 aatgctatcc 585 || ||||||| Sbjct: 24911643 aaagctatcc 24911634
>emb|AL928754.2|CNS08CBR Oryza sativa chromosome 12, . BAC OSJNBa0056D07 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 146686 Score = 135 bits (68), Expect = 2e-28 Identities = 128/148 (86%) Strand = Plus / Plus Query: 371 tgacatggctcgtagcctatccgtgacctcagtgaacgaggggcggatatcgggattggc 430 |||||||||||||||||| || |||||||| ||||| ||||||||||| || |||| ||| Sbjct: 123336 tgacatggctcgtagcctgtcggtgacctccgtgaatgaggggcggatgtcaggatcggc 123395 Query: 431 cgaccaacattgctccatcagtattcgccattcagggtcacaggtttcaggtactggagg 490 |||||| ||||||||||||||| |||||||||||| || ||| ||| |||| ||||| Sbjct: 123396 cgaccagcattgctccatcagttgtcgccattcaggctcgcagtttttgggtatcggagg 123455 Query: 491 ccggagagagttgttcacgataccgcct 518 ||| |||| |||||| |||||||||||| Sbjct: 123456 ccgaagagtgttgttgacgataccgcct 123483 Score = 83.8 bits (42), Expect = 6e-13 Identities = 63/70 (90%) Strand = Plus / Plus Query: 516 cctatgatagcgccgcaatgcatatttgcgtatggttcctcacccgtcaagatttcccat 575 |||||||||||||| || |||||||||||||| ||||||||||| |||||||| ||||| Sbjct: 123670 cctatgatagcgccacagtgcatatttgcgtacggttcctcaccagtcaagatctcccac 123729 Query: 576 aatgctatcc 585 || ||||||| Sbjct: 123730 aaagctatcc 123739
>gb|AC161864.9| Medicago truncatula clone mth2-69d21, complete sequence Length = 133324 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 516 cctatgatagcgccgcaatgcatatttgcgtatggttcctcacccgtcaagatttccca 574 |||||||| || || |||||||||||||| || ||||| || || |||||||||||||| Sbjct: 53152 cctatgatggcaccacaatgcatatttgcataaggttcttctccggtcaagatttccca 53210
>ref|NM_129057.2| Arabidopsis thaliana ATP binding / protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase AT2G35050 mRNA, complete cds Length = 4013 Score = 44.1 bits (22), Expect = 0.51 Identities = 40/46 (86%) Strand = Plus / Minus Query: 532 aatgcatatttgcgtatggttcctcacccgtcaagatttcccataa 577 |||||||||| ||||| ||||||||||| || | ||||||||||| Sbjct: 3559 aatgcatattggcgtagggttcctcaccggtaagaatttcccataa 3514 Score = 40.1 bits (20), Expect = 8.0 Identities = 35/40 (87%) Strand = Plus / Minus Query: 434 ccaacattgctccatcagtattcgccattcagggtcacag 473 |||||| ||||||||||| |||| ||| || ||||||||| Sbjct: 3657 ccaacactgctccatcagcattctccactccgggtcacag 3618
>gb|AC004238.3| Arabidopsis thaliana chromosome 2 clone F19I3 map ve016, complete sequence Length = 108484 Score = 44.1 bits (22), Expect = 0.51 Identities = 40/46 (86%) Strand = Plus / Minus Query: 532 aatgcatatttgcgtatggttcctcacccgtcaagatttcccataa 577 |||||||||| ||||| ||||||||||| || | ||||||||||| Sbjct: 103147 aatgcatattggcgtagggttcctcaccggtaagaatttcccataa 103102 Score = 40.1 bits (20), Expect = 8.0 Identities = 35/40 (87%) Strand = Plus / Minus Query: 434 ccaacattgctccatcagtattcgccattcagggtcacag 473 |||||| ||||||||||| |||| ||| || ||||||||| Sbjct: 103356 ccaacactgctccatcagcattctccactccgggtcacag 103317
>emb|AJ495779.1|HVU495779 Hordeum vulgare partial mRNA for putative protein kinase Length = 1100 Score = 44.1 bits (22), Expect = 0.51 Identities = 34/38 (89%) Strand = Plus / Minus Query: 500 gttgttcacgataccgcctatgatagcgccgcaatgca 537 |||||||||||| || |||||||| |||||| |||||| Sbjct: 652 gttgttcacgatcccacctatgatggcgccgtaatgca 615
>ref|NM_101493.2| Arabidopsis thaliana ATP binding / protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase AT1G16270 mRNA, complete cds Length = 3667 Score = 42.1 bits (21), Expect = 2.0 Identities = 48/57 (84%) Strand = Plus / Minus Query: 500 gttgttcacgataccgcctatgatagcgccgcaatgcatatttgcgtatggttcctc 556 ||||||||| || || ||||| ||||| ||| | |||||||| || ||||||||||| Sbjct: 3261 gttgttcactatcccacctattatagcaccgtagtgcatattagcatatggttcctc 3205
>gb|AC102689.10| Mus musculus chromosome 12, clone RP24-142L2, complete sequence Length = 203221 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 91 caaaggaccaaaaatggaagc 111 ||||||||||||||||||||| Sbjct: 20027 caaaggaccaaaaatggaagc 20047
>emb|AL391117.8| Human DNA sequence from clone RP11-103B9 on chromosome 9, complete sequence Length = 159940 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 241 atacaggtatgctatgtactc 261 ||||||||||||||||||||| Sbjct: 83134 atacaggtatgctatgtactc 83114
>gb|CP000077.1| Sulfolobus acidocaldarius DSM 639, complete genome Length = 2225959 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 170 tacttcagaaaccctaaaaat 190 ||||||||||||||||||||| Sbjct: 476771 tacttcagaaaccctaaaaat 476791
>gb|AC145163.5| Mus musculus BAC clone RP24-238C5 from chromosome 12, complete sequence Length = 194429 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 91 caaaggaccaaaaatggaagc 111 ||||||||||||||||||||| Sbjct: 181183 caaaggaccaaaaatggaagc 181203
>ref|NM_104403.2| Arabidopsis thaliana unknown protein AT1G55280 mRNA, complete cds Length = 1409 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 aaataagaatagatacatca 217 |||||||||||||||||||| Sbjct: 1331 aaataagaatagatacatca 1350
>gb|AC162898.10| Mus musculus chromosome 5, clone RP23-391P21, complete sequence Length = 202279 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 aaatacaggtatgctatgta 258 |||||||||||||||||||| Sbjct: 30377 aaatacaggtatgctatgta 30396
>gb|AY430810.1| Neodiprion sertifer nucleopolyhdrovirus, complete genome Length = 86462 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 185 aaaaatggtcaaaaaataagaata 208 |||||||||||||||| ||||||| Sbjct: 40338 aaaaatggtcaaaaaaaaagaata 40361
>ref|NM_026698.2| Mus musculus transmembrane protein 129 (Tmem129), mRNA Length = 2259 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 aaatacaggtatgctatgta 258 |||||||||||||||||||| Sbjct: 1424 aaatacaggtatgctatgta 1405
>gb|AY587764.1| Homo sapiens opioid receptor, mu 1 (OPRM1) gene, complete cds Length = 83889 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 taaaaatggtcaaaaaataa 203 |||||||||||||||||||| Sbjct: 39024 taaaaatggtcaaaaaataa 39043
>emb|Z48044.1|FOARSTEL F.oxysporum ARS/telomeric DNA Length = 1177 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 aaaccctaaaaatggtcaaa 197 |||||||||||||||||||| Sbjct: 372 aaaccctaaaaatggtcaaa 353
>emb|AL032654.1|CEY52B11A Caenorhabditis elegans YAC Y52B11A, complete sequence Length = 106949 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 caaactacacacaaaaattg 159 |||||||||||||||||||| Sbjct: 12005 caaactacacacaaaaattg 12024
>gb|AC121871.3| Mus musculus BAC clone RP24-121J1 from chromosome 10, complete sequence Length = 214405 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 aagaaacgctacttcagaaa 180 |||||||||||||||||||| Sbjct: 124631 aagaaacgctacttcagaaa 124650
>gb|AC004899.1| Homo sapiens PAC clone RP4-815D20 from 7, complete sequence Length = 91125 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 cagaaaccctaaaaatggtc 194 |||||||||||||||||||| Sbjct: 70559 cagaaaccctaaaaatggtc 70540
>gb|AF125448.1| Caenorhabditis elegans fosmid H14E04, complete sequence Length = 37470 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 ctaaaaatggtcaaaaaata 202 |||||||||||||||||||| Sbjct: 9215 ctaaaaatggtcaaaaaata 9196
>emb|AL160155.19| Human DNA sequence from clone RP11-461N23 on chromosome 13 Contains part of a novel gene (FLJ30001), a H2A histone family, pseudogene, the GPR18 gene for G protein-coupled receptor 18, the EBI2 gene for Epstein-Barr virus induced gene 2 (lymphocyte-specific G protein-coupled receptor), two novel genes and a CpG island, complete sequence Length = 149478 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 aaactacacacaaaaattgc 160 |||||||||||||||||||| Sbjct: 58926 aaactacacacaaaaattgc 58907
>emb|AL136444.15| Human DNA sequence from clone RP3-366F13 on chromosome 6 Contains the OPRM1 gene for opioid receptor, mu 1 (MOR-1) and a CpG island, complete sequence Length = 96310 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 taaaaatggtcaaaaaataa 203 |||||||||||||||||||| Sbjct: 26569 taaaaatggtcaaaaaataa 26550
>emb|CR387919.7| Zebrafish DNA sequence from clone DKEY-120I24, complete sequence Length = 110378 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 210 atacatcaaacagaatacag 229 |||||||||||||||||||| Sbjct: 12024 atacatcaaacagaatacag 12005
>gb|AY080769.1| Arabidopsis thaliana unknown protein (At1g55280) mRNA, partial cds Length = 1425 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 aaataagaatagatacatca 217 |||||||||||||||||||| Sbjct: 1331 aaataagaatagatacatca 1350
>gb|AY945289.1| Fusarium oxysporum strain F11 mitochondrion, complete genome Length = 34477 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 aaaccctaaaaatggtcaaa 197 |||||||||||||||||||| Sbjct: 27040 aaaccctaaaaatggtcaaa 27059
>emb|AL645798.2| Zebrafish DNA sequence from clone BUSM1-227H09 in linkage group 12 Contains the hoxb8b, hoxb6b, hoxb5b and hoxb1b genes, a novel hox pseudogene, and part of a novel gene for an SRC-associated adaptor protein (SKAP55 homologue), complete sequence Length = 80318 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 cgcaaactacacacaaaaat 157 |||||||||||||||||||| Sbjct: 24402 cgcaaactacacacaaaaat 24421
>gb|AC164631.5| Mus musculus 6 BAC RP23-359M3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 237469 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 caaactacacacaaaaattg 159 |||||||||||||||||||| Sbjct: 178389 caaactacacacaaaaattg 178370
>gb|AC123567.8| Homo sapiens 12 BAC RP11-74K11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 114800 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 185 aaaaatggtcaaaaaataagaata 208 ||||||||||||| |||||||||| Sbjct: 91498 aaaaatggtcaaagaataagaata 91521
>gb|AC183100.3| Pan troglodytes BAC clone CH251-736D14 from chromosome 16, complete sequence Length = 173550 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 215 tcaaacagaatacagtgtga 234 |||||||||||||||||||| Sbjct: 114473 tcaaacagaatacagtgtga 114454
>gb|AF339786.1| Homo sapiens clone IMAGE:205156, mRNA sequence Length = 820 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 aaactacacacaaaaattgc 160 |||||||||||||||||||| Sbjct: 205 aaactacacacaaaaattgc 186
>gb|AC079955.9| Homo sapiens chromosome 10 clone RP11-134O16, complete sequence Length = 192042 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 aaatacaggtatgctatgta 258 |||||||||||||||||||| Sbjct: 52580 aaatacaggtatgctatgta 52599
>gb|BC094042.1| Mus musculus transmembrane protein 129, mRNA (cDNA clone MGC:103341 IMAGE:5098723), complete cds Length = 2259 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 aaatacaggtatgctatgta 258 |||||||||||||||||||| Sbjct: 1424 aaatacaggtatgctatgta 1405
>gb|AC009707.9| Homo sapiens chromosome 8, clone RP11-315I17, complete sequence Length = 176193 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 taaaaatggtcaaaaaataa 203 |||||||||||||||||||| Sbjct: 159005 taaaaatggtcaaaaaataa 158986
>dbj|AK172044.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830032K10 product:hypothetical protein, full insert sequence Length = 2372 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 aaatacaggtatgctatgta 258 |||||||||||||||||||| Sbjct: 1553 aaatacaggtatgctatgta 1534
>gb|AC010462.6| Homo sapiens chromosome 5 clone CTD-2276M2, complete sequence Length = 136506 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 tacttcagaaaccctaaaaa 189 |||||||||||||||||||| Sbjct: 109680 tacttcagaaaccctaaaaa 109699
>dbj|AK010497.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:2410015J15 product:hypothetical protein, full insert sequence Length = 1048 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 aaatacaggtatgctatgta 258 |||||||||||||||||||| Sbjct: 234 aaatacaggtatgctatgta 215
>emb|BX323555.10| Zebrafish DNA sequence from clone DKEY-163M14 in linkage group 21, complete sequence Length = 180416 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 223 aatacagtgtgaccataaat 242 |||||||||||||||||||| Sbjct: 158436 aatacagtgtgaccataaat 158417
>gb|AC158540.2| Pan troglodytes BAC clone CH251-315F23 from chromosome unknown, complete sequence Length = 200678 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 199 aataagaatagatacatcaa 218 |||||||||||||||||||| Sbjct: 32142 aataagaatagatacatcaa 32123
>gb|AC158117.2| Pan troglodytes BAC clone CH251-437A17 from chromosome unknown, complete sequence Length = 154069 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 aataagaatagatacatcaa 218 |||||||||||||||||||| Sbjct: 126842 aataagaatagatacatcaa 126861
>gb|AC027034.10|AC027034 Arabidopsis thaliana chromosome 1 BAC F7A10 genomic sequence, complete sequence Length = 101954 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 aaataagaatagatacatca 217 |||||||||||||||||||| Sbjct: 55383 aaataagaatagatacatca 55402
>gb|AC104770.10| Homo sapiens chromosome 17, clone RP11-960B9, complete sequence Length = 188574 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 458 ccattcagggtcacaggttt 477 |||||||||||||||||||| Sbjct: 15342 ccattcagggtcacaggttt 15361
>gb|AC009428.4|AC009428 Homo sapiens chromosome , clone RP11-45M12, complete sequence Length = 167172 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 taaaaatggtcaaaaaataa 203 |||||||||||||||||||| Sbjct: 14606 taaaaatggtcaaaaaataa 14587
>emb|BX001014.6| Zebrafish DNA sequence from clone DKEY-11C5 in linkage group 12, complete sequence Length = 193523 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 cgcaaactacacacaaaaat 157 |||||||||||||||||||| Sbjct: 41872 cgcaaactacacacaaaaat 41891
>gb|AC007277.2|AC007277 Homo sapiens BAC clone RP11-244E6 from 2, complete sequence Length = 180221 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 186 aaaatggtcaaaaaataagaatagatac 213 |||||||||||||||| |||||||||| Sbjct: 139401 aaaatggtcaaaaaatctgaatagatac 139428
>emb|BX901876.11| Zebrafish DNA sequence from clone CH211-140G2 in linkage group 18, complete sequence Length = 155813 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 accataaatacaggtatgct 253 |||||||||||||||||||| Sbjct: 151053 accataaatacaggtatgct 151072
>emb|BX927136.11| Zebrafish DNA sequence from clone DKEY-98O11 in linkage group 18, complete sequence Length = 93818 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 accataaatacaggtatgct 253 |||||||||||||||||||| Sbjct: 80018 accataaatacaggtatgct 80037
>emb|CR855222.6| Zebrafish DNA sequence from clone CH211-265N9 in linkage group 12, complete sequence Length = 140480 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 cgcaaactacacacaaaaat 157 |||||||||||||||||||| Sbjct: 16367 cgcaaactacacacaaaaat 16348
>gb|AY489598.1| Pseudonectria rousseliana strain AR2716 ATP synthase subunit 6 (atp6) gene, partial cds; mitochondrial Length = 655 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 aaaccctaaaaatggtcaaa 197 |||||||||||||||||||| Sbjct: 208 aaaccctaaaaatggtcaaa 227
>gb|AY489595.1| Leuconectria clusiae strain ATCC 22228 ATP synthase subunit 6 (atp6) gene, partial cds; mitochondrial Length = 600 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 aaaccctaaaaatggtcaaa 197 |||||||||||||||||||| Sbjct: 177 aaaccctaaaaatggtcaaa 196
>emb|BX629359.1|CNS09SBT Tetraodon nigroviridis BAC sequence Length = 139693 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 326 gctttatcagcttcctgggg 345 |||||||||||||||||||| Sbjct: 20494 gctttatcagcttcctgggg 20475
>dbj|AP006258.1| Homo sapiens genomic DNA, chromosome 11, clone:RP11-24F19, complete sequence Length = 174444 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 88 aaccaaaggaccaaaaatggaagc 111 ||||||| |||||||||||||||| Sbjct: 29898 aaccaaaagaccaaaaatggaagc 29875
>gb|AY874423.1| Fusarium oxysporum voucher VPRI 19292 mitochondrion, partial genome Length = 33396 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 aaaccctaaaaatggtcaaa 197 |||||||||||||||||||| Sbjct: 20723 aaaccctaaaaatggtcaaa 20742
>dbj|AP005639.2| Homo sapiens genomic DNA, chromosome 11 clone:RP11-131J4, complete sequence Length = 168302 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 88 aaccaaaggaccaaaaatggaagc 111 ||||||| |||||||||||||||| Sbjct: 15500 aaccaaaagaccaaaaatggaagc 15477 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,157,556 Number of Sequences: 3902068 Number of extensions: 5157556 Number of successful extensions: 98886 Number of sequences better than 10.0: 55 Number of HSP's better than 10.0 without gapping: 55 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 98678 Number of HSP's gapped (non-prelim): 208 length of query: 585 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 562 effective length of database: 17,143,297,704 effective search space: 9634533309648 effective search space used: 9634533309648 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
