ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bags11e13 |
|---|---|
| Clone Library Name | barley_pub |
>UBE12_WHEAT (P31251) Ubiquitin-activating enzyme E1 2| Length = 1051 Score = 376 bits (965), Expect = e-104 Identities = 186/197 (94%), Positives = 187/197 (94%) Frame = +3 Query: 3 GVKIVTDEKATSLXXXXXXXXXXIEELIAKLEEISKTLPSGFHMNPIQFEKDDDTNFHMD 182 GVKIVTDEKATSL IEELIAKLEE+SKTLPSGFHMNPIQFEKDDDTNFHMD Sbjct: 803 GVKIVTDEKATSLSSASVDDAAVIEELIAKLEEVSKTLPSGFHMNPIQFEKDDDTNFHMD 862 Query: 183 VIAGFANMRARNYSIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYKALAGGHKVE 362 VIAGFANMRARNYSIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYKALAGGHKVE Sbjct: 863 VIAGFANMRARNYSIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYKALAGGHKVE 922 Query: 363 DYRNTFANLAIPLFSIAEPVPPKTIKHQELSWTVWDRWTVTGNITLRELLEWLKEKGLNA 542 DYRNTFANLAIPLFSIAEPVPPKTIKHQELSWTVWDRWTVTGNITLRELLEWLKEKGLNA Sbjct: 923 DYRNTFANLAIPLFSIAEPVPPKTIKHQELSWTVWDRWTVTGNITLRELLEWLKEKGLNA 982 Query: 543 YSISCGTSLLYNSMFPR 593 YSISCGTSLLYNSMFPR Sbjct: 983 YSISCGTSLLYNSMFPR 999
>UBE11_WHEAT (P20973) Ubiquitin-activating enzyme E1 1| Length = 1051 Score = 373 bits (958), Expect = e-103 Identities = 185/197 (93%), Positives = 186/197 (94%) Frame = +3 Query: 3 GVKIVTDEKATSLXXXXXXXXXXIEELIAKLEEISKTLPSGFHMNPIQFEKDDDTNFHMD 182 GVKIVT EKATSL IEELIAKLEE+SKTLPSGFHMNPIQFEKDDDTNFHMD Sbjct: 803 GVKIVTHEKATSLSSASVDDAAVIEELIAKLEEVSKTLPSGFHMNPIQFEKDDDTNFHMD 862 Query: 183 VIAGFANMRARNYSIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYKALAGGHKVE 362 VIAGFANMRARNYSIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYKALAGGHKVE Sbjct: 863 VIAGFANMRARNYSIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYKALAGGHKVE 922 Query: 363 DYRNTFANLAIPLFSIAEPVPPKTIKHQELSWTVWDRWTVTGNITLRELLEWLKEKGLNA 542 DYRNTFANLAIPLFSIAEPVPPKTIKHQELSWTVWDRWTVTGNITLRELLEWLKEKGLNA Sbjct: 923 DYRNTFANLAIPLFSIAEPVPPKTIKHQELSWTVWDRWTVTGNITLRELLEWLKEKGLNA 982 Query: 543 YSISCGTSLLYNSMFPR 593 YSISCGTSLLYNSMFPR Sbjct: 983 YSISCGTSLLYNSMFPR 999
>UBE13_WHEAT (P31252) Ubiquitin-activating enzyme E1 3| Length = 1053 Score = 311 bits (797), Expect = 9e-85 Identities = 150/197 (76%), Positives = 168/197 (85%) Frame = +3 Query: 3 GVKIVTDEKATSLXXXXXXXXXXIEELIAKLEEISKTLPSGFHMNPIQFEKDDDTNFHMD 182 GV IVTDEKA++L IE+L+AKL+E +K L GF M PIQFEKDDDTNFHMD Sbjct: 805 GVNIVTDEKASNLSSTSVDDVAVIEDLLAKLQEYAKMLLPGFQMKPIQFEKDDDTNFHMD 864 Query: 183 VIAGFANMRARNYSIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYKALAGGHKVE 362 +I+G ANMRARNYSIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYK +AG H VE Sbjct: 865 LISGLANMRARNYSIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYKVIAGEHPVE 924 Query: 363 DYRNTFANLAIPLFSIAEPVPPKTIKHQELSWTVWDRWTVTGNITLRELLEWLKEKGLNA 542 DYRNTFANLA+PLFS+AEPVPPK +KH+E SWTVWDRW+V GN+TL ELL+W +KGL A Sbjct: 925 DYRNTFANLALPLFSMAEPVPPKVMKHKETSWTVWDRWSVQGNLTLAELLQWFADKGLTA 984 Query: 543 YSISCGTSLLYNSMFPR 593 YSISCGTSLLYN+MF R Sbjct: 985 YSISCGTSLLYNNMFAR 1001
>UBE1Y_MOUSE (P31254) Ubiquitin-activating enzyme E1 Y (Fragment)| Length = 442 Score = 166 bits (419), Expect = 6e-41 Identities = 88/203 (43%), Positives = 121/203 (59%), Gaps = 7/203 (3%) Frame = +3 Query: 3 GVKIVTDEKATSLXXXXXXXXXXIEELIAKLEEISKTLPSGFHMNPIQFEKDDDTNFHMD 182 G++I E+ +EEL L K L GF M PI FEKDDD+NFHMD Sbjct: 187 GIRIHVSEQELQSTSATTIDDSHLEELKTALPTPDKLL--GFKMYPIDFEKDDDSNFHMD 244 Query: 183 VIAGFANMRARNYSIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYKALAGGHKVE 362 I +N+RA NY I D+ K+K IAG+IIPAIAT+T+ GLVCLELYK + G ++E Sbjct: 245 FIVAASNLRAENYGISPADRHKSKLIAGKIIPAIATTTSAIVGLVCLELYKVVQGHQQLE 304 Query: 363 DYRNTFANLAIPLFSIAEPVPPKTIKHQELSWTVWDRWTVTG------NITLRELLEWLK 524 Y+N+F NLA+PLFS + P+ P+ + + WT+WDR+ V G +TL++ L++ K Sbjct: 305 SYKNSFINLALPLFSFSAPLAPECHQFYDQEWTLWDRFDVQGLQPSGEEMTLKQFLDYFK 364 Query: 525 -EKGLNAYSISCGTSLLYNSMFP 590 E L +S G S+LY+ P Sbjct: 365 TEHKLEVIMLSQGVSMLYSVFMP 387
>UBE1_HUMAN (P22314) Ubiquitin-activating enzyme E1 (A1S9 protein)| Length = 1058 Score = 166 bits (419), Expect = 6e-41 Identities = 85/180 (47%), Positives = 115/180 (63%), Gaps = 12/180 (6%) Frame = +3 Query: 87 AKLEEISKTLPS-----GFHMNPIQFEKDDDTNFHMDVIAGFANMRARNYSIPEVDKLKA 251 ++LEE+ TLPS GF M PI FEKDDD+NFHMD I +N+RA NY IP D+ K+ Sbjct: 824 SRLEELKATLPSPDKLPGFKMYPIDFEKDDDSNFHMDFIVAASNLRAENYDIPSADRHKS 883 Query: 252 KFIAGRIIPAIATSTAMATGLVCLELYKALAGGHKVEDYRNTFANLAIPLFSIAEPVPPK 431 K IAG+IIPAIAT+TA GLVCLELYK + G +++ Y+N F NLA+P F +EP+ Sbjct: 884 KLIAGKIIPAIATTTAAVVGLVCLELYKVVQGHRQLDSYKNGFLNLALPFFGFSEPLAAP 943 Query: 432 TIKHQELSWTVWDRWTVTG------NITLRELLEWLK-EKGLNAYSISCGTSLLYNSMFP 590 ++ WT+WDR+ V G +TL++ L++ K E L +S G S+LY+ P Sbjct: 944 RHQYYNQEWTLWDRFEVQGLQPNGEEMTLKQFLDYFKTEHKLEITMLSQGVSMLYSFFMP 1003
>UBE1_RABIT (Q29504) Ubiquitin-activating enzyme E1| Length = 1058 Score = 164 bits (416), Expect = 1e-40 Identities = 85/180 (47%), Positives = 114/180 (63%), Gaps = 12/180 (6%) Frame = +3 Query: 87 AKLEEISKTLPS-----GFHMNPIQFEKDDDTNFHMDVIAGFANMRARNYSIPEVDKLKA 251 ++LEE+ TLPS GF M PI FEKDDD+NFHMD I +N+RA NY IP D+ K+ Sbjct: 824 SRLEELKATLPSPDKLPGFKMYPIDFEKDDDSNFHMDFIVAASNLRAENYDIPPADRHKS 883 Query: 252 KFIAGRIIPAIATSTAMATGLVCLELYKALAGGHKVEDYRNTFANLAIPLFSIAEPVPPK 431 K IAG+IIPAIAT+TA GLVCLELYK + G ++ Y+N F NLA+P F +EP+ Sbjct: 884 KLIAGKIIPAIATTTAAVVGLVCLELYKVVQGHRHLDSYKNGFLNLALPFFGFSEPLAAP 943 Query: 432 TIKHQELSWTVWDRWTVTG------NITLRELLEWLK-EKGLNAYSISCGTSLLYNSMFP 590 ++ WT+WDR+ V G +TL++ L++ K E L +S G S+LY+ P Sbjct: 944 RHQYYNQEWTLWDRFEVQGLQPNGEEMTLKQFLDYFKTEHKLEITMLSQGVSMLYSFFMP 1003
>UBE1X_MOUSE (P31253) Ubiquitin-activating enzyme E1 X (Fragment)| Length = 450 Score = 162 bits (410), Expect = 7e-40 Identities = 84/180 (46%), Positives = 114/180 (63%), Gaps = 12/180 (6%) Frame = +3 Query: 87 AKLEEISKTLPS-----GFHMNPIQFEKDDDTNFHMDVIAGFANMRARNYSIPEVDKLKA 251 ++LEE+ TLPS GF M PI FEKDDD+NFHMD I +N+RA NY I D+ K+ Sbjct: 210 SRLEELKATLPSPDKLPGFKMYPIDFEKDDDSNFHMDFIVAASNLRAENYDISPADRHKS 269 Query: 252 KFIAGRIIPAIATSTAMATGLVCLELYKALAGGHKVEDYRNTFANLAIPLFSIAEPVPPK 431 K IAG+IIPAIAT+TA GLVCLELYK + G +++ Y+N F NLA+P F +EP+ Sbjct: 270 KLIAGKIIPAIATTTAAVVGLVCLELYKVVQGHQQLDSYKNGFLNLALPFFGFSEPLAAP 329 Query: 432 TIKHQELSWTVWDRWTVTG------NITLRELLEWLK-EKGLNAYSISCGTSLLYNSMFP 590 ++ WT+WDR+ V G +TL++ L++ K E L +S G S+LY+ P Sbjct: 330 RHQYYNQEWTLWDRFEVQGVQPNGEEMTLKQFLDYFKTEHKLEITMLSQGVSMLYSFFMP 389
>UBE1_MOUSE (Q02053) Ubiquitin-activating enzyme E1 1| Length = 1058 Score = 162 bits (410), Expect = 7e-40 Identities = 84/180 (46%), Positives = 114/180 (63%), Gaps = 12/180 (6%) Frame = +3 Query: 87 AKLEEISKTLPS-----GFHMNPIQFEKDDDTNFHMDVIAGFANMRARNYSIPEVDKLKA 251 ++LEE+ TLPS GF M PI FEKDDD+NFHMD I +N+RA NY I D+ K+ Sbjct: 824 SRLEELKATLPSPDKLPGFKMYPIDFEKDDDSNFHMDFIVAASNLRAENYDISPADRHKS 883 Query: 252 KFIAGRIIPAIATSTAMATGLVCLELYKALAGGHKVEDYRNTFANLAIPLFSIAEPVPPK 431 K IAG+IIPAIAT+TA GLVCLELYK + G +++ Y+N F NLA+P F +EP+ Sbjct: 884 KLIAGKIIPAIATTTAAVVGLVCLELYKVVQGHQQLDSYKNGFLNLALPFFGFSEPLAAP 943 Query: 432 TIKHQELSWTVWDRWTVTG------NITLRELLEWLK-EKGLNAYSISCGTSLLYNSMFP 590 ++ WT+WDR+ V G +TL++ L++ K E L +S G S+LY+ P Sbjct: 944 RHQYYNQEWTLWDRFEVQGLQPNGEEMTLKQFLDYFKTEHKLEITMLSQGVSMLYSFFMP 1003
>UBA1_YEAST (P22515) Ubiquitin-activating enzyme E1 1| Length = 1024 Score = 153 bits (387), Expect = 3e-37 Identities = 81/175 (46%), Positives = 115/175 (65%), Gaps = 2/175 (1%) Frame = +3 Query: 72 IEELIAKLEEISKTLPSGFHMNPIQFEKDDDTNFHMDVIAGFANMRARNYSIPEVDKLKA 251 I++L++ L + S +GF + P+ FEKDDDTN H++ I +N RA+NY I D+ K Sbjct: 798 IDQLVSSLPDPSTL--AGFKLEPVDFEKDDDTNHHIEFITACSNCRAQNYFIETADRQKT 855 Query: 252 KFIAGRIIPAIATSTAMATGLVCLELYKALAGGHKVEDYRNTFANLAIPLFSIAEPV-PP 428 KFIAGRIIPAIAT+T++ TGLV LELYK + +E Y+N F NLA+P F +EP+ P Sbjct: 856 KFIAGRIIPAIATTTSLVTGLVNLELYKLIDNKTDIEQYKNGFVNLALPFFGFSEPIASP 915 Query: 429 KTIKHQELSWTVWDRWTVTGNITLRELLE-WLKEKGLNAYSISCGTSLLYNSMFP 590 K + + +WDR+ + G+I L +L+E + K++GL +S G SLLY S FP Sbjct: 916 KGEYNNKKYDKIWDRFDIKGDIKLSDLIEHFEKDEGLEITMLSYGVSLLYASFFP 970
>UBA1_CANAL (P52495) Ubiquitin-activating enzyme E1 1 (Fragment)| Length = 205 Score = 149 bits (375), Expect = 8e-36 Identities = 77/151 (50%), Positives = 101/151 (66%), Gaps = 2/151 (1%) Frame = +3 Query: 144 QFEKDDDTNFHMDVIAGFANMRARNYSIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCL 323 +FEKDDDTN H++ I +N RA NY I D K KFIAG+IIPAIAT+TA+ TGLVCL Sbjct: 1 EFEKDDDTNHHIEFITAASNCRALNYGIEIADAHKTKFIAGKIIPAIATTTALVTGLVCL 60 Query: 324 ELYKALAGGHKVEDYRNTFANLAIPLFSIAEPVPPKTIKHQELSW-TVWDRWTVTGNITL 500 ELYK + G +E Y+N F NLA+P +EP+ K+ + +WDR+ + G+ITL Sbjct: 61 ELYKVVDGKDDIEQYKNGFINLALPFIGFSEPIKSPEGKYNNKKFDQIWDRFELNGDITL 120 Query: 501 RELLE-WLKEKGLNAYSISCGTSLLYNSMFP 590 +ELL+ + KE+GL +S G SLLY S FP Sbjct: 121 QELLDHFEKEEGLTISMLSYGVSLLYASFFP 151
>UBA1_SCHPO (O94609) Ubiquitin-activating enzyme E1 1 (Poly(A)+ RNA transport| protein 3) Length = 1012 Score = 147 bits (372), Expect = 2e-35 Identities = 77/175 (44%), Positives = 116/175 (66%), Gaps = 8/175 (4%) Frame = +3 Query: 90 KLEEISKTLPS-----GFHMNPIQFEKDDDTNFHMDVIAGFANMRARNYSIPEVDKLKAK 254 +L+ I+ +LP GF + P +FEKDDD+N H+D I +N+RA NY I D+ K K Sbjct: 786 ELKSIADSLPPPSSLVGFRLTPAEFEKDDDSNHHIDFITAASNLRAMNYDITPADRFKTK 845 Query: 255 FIAGRIIPAIATSTAMATGLVCLELYKALAGGHKVEDYRNTFANLAIPLFSIAEPV--PP 428 F+AG+I+PA+ TSTA+ +GLVCLEL K + G K+E+Y+N F NLAI LF+ ++P+ P Sbjct: 846 FVAGKIVPAMCTSTAVVSGLVCLELVKLVDGKKKIEEYKNGFFNLAIGLFTFSDPIASPK 905 Query: 429 KTIKHQELSWTVWDRWTVTGNITLRELLEWL-KEKGLNAYSISCGTSLLYNSMFP 590 + +E+ +WDR+ + + TL+EL+++ KE+GL +S G SLLY + P Sbjct: 906 MKVNGKEID-KIWDRYNLP-DCTLQELIDYFQKEEGLEVTMLSSGVSLLYANFQP 958
>UBE1L_HUMAN (P41226) Ubiquitin-activating enzyme E1 homolog (D8)| Length = 1011 Score = 111 bits (278), Expect = 1e-24 Identities = 66/167 (39%), Positives = 96/167 (57%), Gaps = 7/167 (4%) Frame = +3 Query: 96 EEISKTLPS---GFHMNPIQFEKDDDTNFHMDVIAGFANMRARNYSIPEVDKLKAKFIAG 266 +E++K L G + P+ FEKDDD+NFH+D + A++R +NY IP V++ ++K I G Sbjct: 787 KELNKALEVWSVGPPLKPLMFEKDDDSNFHVDFVVAAASLRCQNYGIPPVNRAQSKRIVG 846 Query: 267 RIIPAIATSTAMATGLVCLELYKALAGGHKVEDYRNTFANLAIPLFSIAEPVPPKTIKHQ 446 +IIPAIAT+TA GL+ LELYK ++G +R+++ +LA P P Sbjct: 847 QIIPAIATTTAAVAGLLGLELYKVVSGPRPRSAFRHSYLHLAENYLIRYMPFAPAIQTFH 906 Query: 447 ELSWTVWDRWTVTG---NITLRELLEWLKEK-GLNAYSISCGTSLLY 575 L WT WDR V TL LL L+E+ GL + G++LLY Sbjct: 907 HLKWTSWDRLKVPAGQPERTLESLLAHLQEQHGLRVRILLHGSALLY 953
>ULE1B_HUMAN (Q9UBT2) Ubiquitin-like 1-activating enzyme E1B (SUMO-1-activating| enzyme subunit 2) (Anthracycline-associated resistance ARX) Length = 640 Score = 52.0 bits (123), Expect = 1e-06 Identities = 31/80 (38%), Positives = 46/80 (57%) Frame = +3 Query: 147 FEKDDDTNFHMDVIAGFANMRARNYSIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLE 326 ++KDD + MD + AN+R +S+ + K +AG IIPAIAT+ A+ GL+ LE Sbjct: 344 WDKDDPSA--MDFVTSAANLRMHIFSMNMKSRFDIKSMAGNIIPAIATTNAVIAGLIVLE 401 Query: 327 LYKALAGGHKVEDYRNTFAN 386 K L+G K++ R F N Sbjct: 402 GLKILSG--KIDQCRTIFLN 419
>ULE1B_MOUSE (Q9Z1F9) Ubiquitin-like 1-activating enzyme E1B (SUMO-1-activating| enzyme subunit 2) (Anthracycline-associated resistance ARX) Length = 638 Score = 51.2 bits (121), Expect = 2e-06 Identities = 31/80 (38%), Positives = 45/80 (56%) Frame = +3 Query: 147 FEKDDDTNFHMDVIAGFANMRARNYSIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLE 326 ++KDD MD + AN+R +S+ + K +AG IIPAIAT+ A+ GL+ LE Sbjct: 342 WDKDDPPA--MDFVTSAANLRMHIFSMNMKSRFDIKSMAGNIIPAIATTNAVIAGLIVLE 399 Query: 327 LYKALAGGHKVEDYRNTFAN 386 K L+G K++ R F N Sbjct: 400 GLKILSG--KIDQCRTIFLN 417
>UBA2_YEAST (P52488) Ubiquitin-activating enzyme E1-like| (Polymerase-interacting protein 2) Length = 636 Score = 48.1 bits (113), Expect = 2e-05 Identities = 32/83 (38%), Positives = 48/83 (57%), Gaps = 3/83 (3%) Frame = +3 Query: 72 IEELIAKLEEISKTLPSGF--HMNPIQFEKDD-DTNFHMDVIAGFANMRARNYSIPEVDK 242 I+E I+ I++ L + N I+F+KDD DT ++ +A AN+R+ ++IP Sbjct: 303 IQEQISNFINITQKLMDRYPKEQNHIEFDKDDADT---LEFVATAANIRSHIFNIPMKSV 359 Query: 243 LKAKFIAGRIIPAIATSTAMATG 311 K IAG IIPAIAT+ A+ G Sbjct: 360 FDIKQIAGNIIPAIATTNAIVAG 382
>UBA3_CAEEL (Q19360) NEDD8-activating enzyme E1 catalytic subunit (EC 6.3.2.-)| (Ubiquitin-activating enzyme 3 homolog) (Ectopic membrane ruffles in embryo protein 1) Length = 430 Score = 38.9 bits (89), Expect = 0.011 Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 1/74 (1%) Frame = +3 Query: 156 DDDTNFHMDVIAGFANMRARNYSIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYK 335 D D H++ + A++RA Y+I VD+ + RIIPA+A++ A+ LE K Sbjct: 244 DADDPIHVEWVLERASLRAEKYNIRGVDRRLTSGVLKRIIPAVASTNAVIAASCALEALK 303 Query: 336 ALAGGHK-VEDYRN 374 K +++Y N Sbjct: 304 LATNIAKPIDNYLN 317
>LPXK_SILPO (Q5LMW7) Tetraacyldisaccharide 4'-kinase (EC 2.7.1.130) (Lipid A| 4'-kinase) Length = 333 Score = 35.4 bits (80), Expect = 0.13 Identities = 32/83 (38%), Positives = 44/83 (53%), Gaps = 2/83 (2%) Frame = +3 Query: 192 GFANMR-ARNYSIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYKALAGGHKVEDY 368 GF N A++ SI VD + F GR IPA +ATGL +L AL E + Sbjct: 145 GFQNPSVAKDLSIVVVDAAQG-FGNGRCIPAGPLREPVATGLARADLVLALGDAQAQEQF 203 Query: 369 RNTF-ANLAIPLFSIAEPVPPKT 434 R+T+ A L++PL + AE P +T Sbjct: 204 RDTWGAALSVPLVT-AELKPLRT 225
>AMOH_ARTGO (Q59118) Histamine oxidase (EC 1.4.3.6) (Copper amine oxidase)| Length = 683 Score = 33.1 bits (74), Expect = 0.62 Identities = 34/127 (26%), Positives = 42/127 (33%), Gaps = 25/127 (19%) Frame = +2 Query: 191 WFCQHEGKELQHSGS------GQAKGQVYSRQDHP------------SYRHLDCDGHWPR 316 W +H +EL +G G A Y QD H WP Sbjct: 561 WVTRHAEEELYAAGDFVNQHPGGAVLPAYVAQDRDIDGQDLVVWHSFGLTHFPRPEDWPI 620 Query: 317 VPRALQSPCWWTQGRRLPQHVCKPRDPTVL-------HC*TGSTQDHQAPGAVVDGLGPV 475 +P T G L H +PT+ HC TGS ++H APG G Sbjct: 621 MPVD-------TTGFTLKPHGFFDENPTLNVPSSAAGHCGTGSEREHAAPGGTAVGHSGP 673 Query: 476 DCNGQHH 496 D GQ H Sbjct: 674 DTGGQGH 680
>MANA_STRLI (P51529) Mannan endo-1,4-beta-mannosidase precursor (EC 3.2.1.78)| (Beta-mannanase) (1,4-beta-D-mannan mannanohydrolase) Length = 383 Score = 32.3 bits (72), Expect = 1.1 Identities = 19/78 (24%), Positives = 32/78 (41%), Gaps = 4/78 (5%) Frame = -3 Query: 467 PDRPRQLLVLDGLGWNR----FSNGEQWDREVCKRVAVVFDLVSTSKGFVKLEAHEASGH 300 PDR + + G N S+G +W + V+ + +K LE H+ +G+ Sbjct: 68 PDRTGSIADIAAKGANTVRVVLSSGGRWTKTSASEVSALIGQCKANKVICVLEVHDTTGY 127 Query: 299 RSRGGDSWDDPAGYKLGL 246 G S D Y +G+ Sbjct: 128 GKDGATSLDQAGDYWVGV 145
>UBA3_ARATH (O65041) NEDD8-activating enzyme E1 catalytic subunit (EC 6.3.2.-)| (RUB-activating enzyme) (Ubiquitin activating enzyme E1-like protein) Length = 454 Score = 32.0 bits (71), Expect = 1.4 Identities = 21/67 (31%), Positives = 31/67 (46%) Frame = +3 Query: 156 DDDTNFHMDVIAGFANMRARNYSIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYK 335 D D HM + A RA + IP V + + IIPAIA++ A+ + LE K Sbjct: 246 DPDEPEHMKWVYDEAIRRAELFGIPGVTYSLTQGVVKNIIPAIASTNAIISAACALETLK 305 Query: 336 ALAGGHK 356 ++ K Sbjct: 306 IVSACSK 312
>ITB7_MOUSE (P26011) Integrin beta-7 precursor (Integrin beta-P) (M290 IEL| antigen) Length = 806 Score = 31.6 bits (70), Expect = 1.8 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = -2 Query: 222 CSSLPSCWQNQLSHPYGSWCHHPSQTVSG 136 C +PSC + LSHP +WC + T SG Sbjct: 45 CQPVPSCQKCILSHPSCAWCKQLNFTASG 73
>UBA3_SCHPO (Q09765) NEDD8-activating enzyme E1 catalytic subunit (EC 6.3.2.-)| (Ubiquitin-activating enzyme E1 3) Length = 444 Score = 31.6 bits (70), Expect = 1.8 Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 2/64 (3%) Frame = +3 Query: 156 DDDTNFHMDVIAGFANMRARNYSIPE--VDKLKAKFIAGRIIPAIATSTAMATGLVCLEL 329 + D H+D + + RA + IP +++ + I RIIPA+A++ A+ C E Sbjct: 255 EPDNIRHIDWLVKRSIERANKFQIPSSSINRFFVQGIVKRIIPAVASTNAIIAASCCNEA 314 Query: 330 YKAL 341 K L Sbjct: 315 LKIL 318
>ATRN_RAT (Q99J86) Attractin precursor (Zitter protein)| Length = 1432 Score = 31.2 bits (69), Expect = 2.4 Identities = 16/38 (42%), Positives = 19/38 (50%) Frame = -2 Query: 243 ACPLPECCSSLPSCWQNQLSHPYGSWCHHPSQTVSGSC 130 +CP PE CS +C + L P WC PS T G C Sbjct: 984 SCP-PENCSGYCTC-SHCLEQPGCGWCTDPSNTGKGKC 1019
>RADA_RICPR (Q9ZD04) DNA repair protein radA homolog (DNA repair protein sms| homolog) Length = 448 Score = 31.2 bits (69), Expect = 2.4 Identities = 28/102 (27%), Positives = 48/102 (47%), Gaps = 2/102 (1%) Frame = +3 Query: 291 STAMATGLVCLELYKALAGGHKVEDYRNTFANLAIPLFSIAE--PVPPKTIKHQELSWTV 464 S+ + L E+Y ++AGG K+ D + A +A L S A P+P ++ E+S + Sbjct: 340 SSRIGLNLANYEIYLSIAGGLKIADPASDLA-VAASLISAATSIPLPEHSVFFGEISLSG 398 Query: 465 WDRWTVTGNITLRELLEWLKEKGLNAYSISCGTSLLYNSMFP 590 R T ++E + + G N S +L Y+ +FP Sbjct: 399 EIRKTAKAETRIKEAV----KLGFNKVICSKLENLTYDFIFP 436
>ATRN_MOUSE (Q9WU60) Attractin precursor (Mahogany protein)| Length = 1428 Score = 31.2 bits (69), Expect = 2.4 Identities = 16/38 (42%), Positives = 19/38 (50%) Frame = -2 Query: 243 ACPLPECCSSLPSCWQNQLSHPYGSWCHHPSQTVSGSC 130 +CP PE CS +C + L P WC PS T G C Sbjct: 980 SCP-PENCSGYCTC-SHCLEQPGCGWCTDPSNTGKGKC 1015
>ITB7_HUMAN (P26010) Integrin beta-7 precursor| Length = 798 Score = 30.8 bits (68), Expect = 3.1 Identities = 13/29 (44%), Positives = 16/29 (55%) Frame = -2 Query: 222 CSSLPSCWQNQLSHPYGSWCHHPSQTVSG 136 C PSC + LSHP +WC + T SG Sbjct: 45 CQPAPSCQKCILSHPSCAWCKQLNFTASG 73
>ATRN_HUMAN (O75882) Attractin precursor (Mahogany homolog) (DPPT-L)| Length = 1429 Score = 30.8 bits (68), Expect = 3.1 Identities = 16/37 (43%), Positives = 18/37 (48%) Frame = -2 Query: 240 CPLPECCSSLPSCWQNQLSHPYGSWCHHPSQTVSGSC 130 CP PE CS +C + L P WC PS T G C Sbjct: 982 CP-PENCSGYCTC-SHCLEQPGCGWCTDPSNTGKGKC 1016
>UBA3_PONPY (Q5R4A0) NEDD8-activating enzyme E1 catalytic subunit (EC 6.3.2.-)| (Ubiquitin-activating enzyme 3) (NEDD8-activating enzyme E1C) (Ubiquitin-activating enzyme E1C) Length = 463 Score = 30.4 bits (67), Expect = 4.0 Identities = 18/60 (30%), Positives = 30/60 (50%) Frame = +3 Query: 156 DDDTNFHMDVIAGFANMRARNYSIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYK 335 D D H+ I + RA Y+I V + + RIIPA+A++ A+ + E++K Sbjct: 271 DGDDPEHIQWIFQKSLERASQYNIRGVTYRLTQGVVKRIIPAVASTNAVVAAVCATEVFK 330
>UBA3_RAT (Q99MI7) NEDD8-activating enzyme E1 catalytic subunit (EC 6.3.2.-)| (Ubiquitin-activating enzyme 3) (NEDD8-activating enzyme E1C) (Ubiquitin-activating enzyme E1C) Length = 462 Score = 30.0 bits (66), Expect = 5.3 Identities = 18/60 (30%), Positives = 30/60 (50%) Frame = +3 Query: 156 DDDTNFHMDVIAGFANMRARNYSIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYK 335 D D H+ I + RA Y+I V + + RIIPA+A++ A+ + E++K Sbjct: 271 DGDDPEHIQWIFQKSVERASQYNIRGVTYRLTQGVVKRIIPAVASTNAVIAAVCATEVFK 330
>UBA3_MOUSE (Q8C878) NEDD8-activating enzyme E1 catalytic subunit (EC 6.3.2.-)| (Ubiquitin-activating enzyme 3) (NEDD8-activating enzyme E1C) (Ubiquitin-activating enzyme E1C) Length = 462 Score = 30.0 bits (66), Expect = 5.3 Identities = 18/60 (30%), Positives = 30/60 (50%) Frame = +3 Query: 156 DDDTNFHMDVIAGFANMRARNYSIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYK 335 D D H+ I + RA Y+I V + + RIIPA+A++ A+ + E++K Sbjct: 271 DGDDPEHIQWIFQKSIERASQYNIRGVTYRLTQGVVKRIIPAVASTNAVIAAVCATEVFK 330
>UBA3_HUMAN (Q8TBC4) NEDD8-activating enzyme E1 catalytic subunit (EC 6.3.2.-)| (Ubiquitin-activating enzyme 3) (NEDD8-activating enzyme E1C) (Ubiquitin-activating enzyme E1C) Length = 463 Score = 30.0 bits (66), Expect = 5.3 Identities = 18/60 (30%), Positives = 30/60 (50%) Frame = +3 Query: 156 DDDTNFHMDVIAGFANMRARNYSIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYK 335 D D H+ I + RA Y+I V + + RIIPA+A++ A+ + E++K Sbjct: 271 DGDDPEHIQWIFQKSLERASQYNIRGVTYRLTQGVVKRIIPAVASTNAVIAAVCATEVFK 330
>POLG_MVEV5 (P05769) Genome polyprotein [Contains: Capsid protein C (Core| protein); Envelope protein M (Matrix protein); Major envelope protein E; Nonstructural protein 1 (NS1); Nonstructural protein 2A (NS2A); Flavivirin protease NS2B regulatory subunit; Length = 3434 Score = 29.3 bits (64), Expect = 9.0 Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 2/30 (6%) Frame = -2 Query: 201 WQNQLSHPYGSWCHHPSQTV--SGSCGTLM 118 W +HPY +W +H S V SGS TL+ Sbjct: 2823 WHTDDNHPYRTWTYHGSYEVKPSGSASTLV 2852
>BCHN_RHOS4 (Q9RFD4) Light-independent protochlorophyllide reductase subunit N| (EC 1.18.-.-) (LI-POR subunit N) (DPOR subunit N) Length = 428 Score = 29.3 bits (64), Expect = 9.0 Identities = 12/19 (63%), Positives = 13/19 (68%) Frame = +2 Query: 461 GLGPVDCNGQHHAEGAPGV 517 G+GPV C HHA APGV Sbjct: 198 GIGPVRCLPAHHAAEAPGV 216
>KRA13_HUMAN (Q8IUG1) Keratin-associated protein 1-3 (Keratin-associated protein| 1.8) (Keratin-associated protein 1.9) Length = 177 Score = 29.3 bits (64), Expect = 9.0 Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 6/46 (13%) Frame = -2 Query: 243 ACPLPECCSSL---PSCWQNQLSHP---YGSWCHHPSQTVSGSCGT 124 +C P CC + PSC + P S+C PS + SG+C + Sbjct: 23 SCCQPSCCETSCCQPSCCETSCCQPSCCQTSFCGFPSFSTSGTCSS 68 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 88,320,018 Number of Sequences: 219361 Number of extensions: 1956512 Number of successful extensions: 6623 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 6259 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6615 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5216272880 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
