| Clone Name | bags11e01 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_483742.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1054 Score = 311 bits (157), Expect = 1e-81 Identities = 292/337 (86%) Strand = Plus / Plus Query: 196 tgtggtcaagcggagctagcgacaagaacaaggctatggttgagcaactgcagagatatg 255 ||||||||||||| |||||||||||||||||||| ||||||||||| || ||||| || | Sbjct: 199 tgtggtcaagcggggctagcgacaagaacaaggcaatggttgagcagctccagaggtacg 258 Query: 256 gggtaatcaagtcgaccaaagttgcggaggtcatggagaccatcgataggggtctgtttg 315 || | |||||||||| ||| || ||| |||| |||||||||||||| ||||| ||||||| Sbjct: 259 ggattatcaagtcgagcaaggtcgcgcaggtgatggagaccatcgacagggggctgtttg 318 Query: 316 tgcctccgggtggttctccctattttgatagcccaatggcaattggctacaatgcaacca 375 ||||||| |||| |||||||||||| || ||||| ||| | || || ||||| || |||| Sbjct: 319 tgcctcctggtgcttctccctatttcgacagcccgatgcccatcggttacaacgccacca 378 Query: 376 tatctgcgcctcacatgcatgctgcttgcctggagctcctggaggatcatctgcaggctg 435 | ||||||||||||||||| || ||||| |||||||||||||| | || || ||| ||| Sbjct: 379 tttctgcgcctcacatgcacgcctcttgcttggagctcctggagaagcaccttcagcctg 438 Query: 436 gtatgcgggctctggatgttggatcaggcactgggtacctaacagcttgctttgcactta 495 | ||||| ||||||||||||||||||||||| |||||||||||||||||||| || ||| Sbjct: 439 gcatgcgtgctctggatgttggatcaggcacagggtacctaacagcttgcttcgcgatta 498 Query: 496 tggttggaccgggaggacgagcagttggtgttgaaca 532 |||||||||| | ||| |||||||||||||||||||| Sbjct: 499 tggttggaccagaagggcgagcagttggtgttgaaca 535
>ref|XM_507330.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1150_A11.18 mRNA Length = 1064 Score = 311 bits (157), Expect = 1e-81 Identities = 292/337 (86%) Strand = Plus / Plus Query: 196 tgtggtcaagcggagctagcgacaagaacaaggctatggttgagcaactgcagagatatg 255 ||||||||||||| |||||||||||||||||||| ||||||||||| || ||||| || | Sbjct: 208 tgtggtcaagcggggctagcgacaagaacaaggcaatggttgagcagctccagaggtacg 267 Query: 256 gggtaatcaagtcgaccaaagttgcggaggtcatggagaccatcgataggggtctgtttg 315 || | |||||||||| ||| || ||| |||| |||||||||||||| ||||| ||||||| Sbjct: 268 ggattatcaagtcgagcaaggtcgcgcaggtgatggagaccatcgacagggggctgtttg 327 Query: 316 tgcctccgggtggttctccctattttgatagcccaatggcaattggctacaatgcaacca 375 ||||||| |||| |||||||||||| || ||||| ||| | || || ||||| || |||| Sbjct: 328 tgcctcctggtgcttctccctatttcgacagcccgatgcccatcggttacaacgccacca 387 Query: 376 tatctgcgcctcacatgcatgctgcttgcctggagctcctggaggatcatctgcaggctg 435 | ||||||||||||||||| || ||||| |||||||||||||| | || || ||| ||| Sbjct: 388 tttctgcgcctcacatgcacgcctcttgcttggagctcctggagaagcaccttcagcctg 447 Query: 436 gtatgcgggctctggatgttggatcaggcactgggtacctaacagcttgctttgcactta 495 | ||||| ||||||||||||||||||||||| |||||||||||||||||||| || ||| Sbjct: 448 gcatgcgtgctctggatgttggatcaggcacagggtacctaacagcttgcttcgcgatta 507 Query: 496 tggttggaccgggaggacgagcagttggtgttgaaca 532 |||||||||| | ||| |||||||||||||||||||| Sbjct: 508 tggttggaccagaagggcgagcagttggtgttgaaca 544
>dbj|AK100496.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099B17, full insert sequence Length = 1064 Score = 311 bits (157), Expect = 1e-81 Identities = 292/337 (86%) Strand = Plus / Plus Query: 196 tgtggtcaagcggagctagcgacaagaacaaggctatggttgagcaactgcagagatatg 255 ||||||||||||| |||||||||||||||||||| ||||||||||| || ||||| || | Sbjct: 208 tgtggtcaagcggggctagcgacaagaacaaggcaatggttgagcagctccagaggtacg 267 Query: 256 gggtaatcaagtcgaccaaagttgcggaggtcatggagaccatcgataggggtctgtttg 315 || | |||||||||| ||| || ||| |||| |||||||||||||| ||||| ||||||| Sbjct: 268 ggattatcaagtcgagcaaggtcgcgcaggtgatggagaccatcgacagggggctgtttg 327 Query: 316 tgcctccgggtggttctccctattttgatagcccaatggcaattggctacaatgcaacca 375 ||||||| |||| |||||||||||| || ||||| ||| | || || ||||| || |||| Sbjct: 328 tgcctcctggtgcttctccctatttcgacagcccgatgcccatcggttacaacgccacca 387 Query: 376 tatctgcgcctcacatgcatgctgcttgcctggagctcctggaggatcatctgcaggctg 435 | ||||||||||||||||| || ||||| |||||||||||||| | || || ||| ||| Sbjct: 388 tttctgcgcctcacatgcacgcctcttgcttggagctcctggagaagcaccttcagcctg 447 Query: 436 gtatgcgggctctggatgttggatcaggcactgggtacctaacagcttgctttgcactta 495 | ||||| ||||||||||||||||||||||| |||||||||||||||||||| || ||| Sbjct: 448 gcatgcgtgctctggatgttggatcaggcacagggtacctaacagcttgcttcgcgatta 507 Query: 496 tggttggaccgggaggacgagcagttggtgttgaaca 532 |||||||||| | ||| |||||||||||||||||||| Sbjct: 508 tggttggaccagaagggcgagcagttggtgttgaaca 544
>dbj|AK059917.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-209-F04, full insert sequence Length = 1054 Score = 311 bits (157), Expect = 1e-81 Identities = 292/337 (86%) Strand = Plus / Plus Query: 196 tgtggtcaagcggagctagcgacaagaacaaggctatggttgagcaactgcagagatatg 255 ||||||||||||| |||||||||||||||||||| ||||||||||| || ||||| || | Sbjct: 199 tgtggtcaagcggggctagcgacaagaacaaggcaatggttgagcagctccagaggtacg 258 Query: 256 gggtaatcaagtcgaccaaagttgcggaggtcatggagaccatcgataggggtctgtttg 315 || | |||||||||| ||| || ||| |||| |||||||||||||| ||||| ||||||| Sbjct: 259 ggattatcaagtcgagcaaggtcgcgcaggtgatggagaccatcgacagggggctgtttg 318 Query: 316 tgcctccgggtggttctccctattttgatagcccaatggcaattggctacaatgcaacca 375 ||||||| |||| |||||||||||| || ||||| ||| | || || ||||| || |||| Sbjct: 319 tgcctcctggtgcttctccctatttcgacagcccgatgcccatcggttacaacgccacca 378 Query: 376 tatctgcgcctcacatgcatgctgcttgcctggagctcctggaggatcatctgcaggctg 435 | ||||||||||||||||| || ||||| |||||||||||||| | || || ||| ||| Sbjct: 379 tttctgcgcctcacatgcacgcctcttgcttggagctcctggagaagcaccttcagcctg 438 Query: 436 gtatgcgggctctggatgttggatcaggcactgggtacctaacagcttgctttgcactta 495 | ||||| ||||||||||||||||||||||| |||||||||||||||||||| || ||| Sbjct: 439 gcatgcgtgctctggatgttggatcaggcacagggtacctaacagcttgcttcgcgatta 498 Query: 496 tggttggaccgggaggacgagcagttggtgttgaaca 532 |||||||||| | ||| |||||||||||||||||||| Sbjct: 499 tggttggaccagaagggcgagcagttggtgttgaaca 535
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 230 bits (116), Expect = 4e-57 Identities = 230/268 (85%) Strand = Plus / Plus Query: 196 tgtggtcaagcggagctagcgacaagaacaaggctatggttgagcaactgcagagatatg 255 ||||||||||||| |||||||||||||||||||| ||||||||||| || ||||| || | Sbjct: 27870897 tgtggtcaagcggggctagcgacaagaacaaggcaatggttgagcagctccagaggtacg 27870956 Query: 256 gggtaatcaagtcgaccaaagttgcggaggtcatggagaccatcgataggggtctgtttg 315 || | |||||||||| ||| || ||| |||| |||||||||||||| ||||| ||||||| Sbjct: 27870957 ggattatcaagtcgagcaaggtcgcgcaggtgatggagaccatcgacagggggctgtttg 27871016 Query: 316 tgcctccgggtggttctccctattttgatagcccaatggcaattggctacaatgcaacca 375 ||||||| |||| |||||||||||| || ||||| ||| | || || ||||| || |||| Sbjct: 27871017 tgcctcctggtgcttctccctatttcgacagcccgatgcccatcggttacaacgccacca 27871076 Query: 376 tatctgcgcctcacatgcatgctgcttgcctggagctcctggaggatcatctgcaggctg 435 | ||||||||||||||||| || ||||| |||||||||||||| | || || ||| ||| Sbjct: 27871077 tttctgcgcctcacatgcacgcctcttgcttggagctcctggagaagcaccttcagcctg 27871136 Query: 436 gtatgcgggctctggatgttggatcagg 463 | ||||| |||||||||||||||||||| Sbjct: 27871137 gcatgcgtgctctggatgttggatcagg 27871164 Score = 89.7 bits (45), Expect = 9e-15 Identities = 66/73 (90%) Strand = Plus / Plus Query: 460 caggcactgggtacctaacagcttgctttgcacttatggttggaccgggaggacgagcag 519 ||||||| |||||||||||||||||||| || ||||||||||||| | ||| ||||||| Sbjct: 27871750 caggcacagggtacctaacagcttgcttcgcgattatggttggaccagaagggcgagcag 27871809 Query: 520 ttggtgttgaaca 532 ||||||||||||| Sbjct: 27871810 ttggtgttgaaca 27871822 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 136 tcgccatggaggtagtccgctccatcttctcctgtttctcctc 178 |||||||||||||| |||||| |||||| ||||| |||||||| Sbjct: 27870322 tcgccatggaggtactccgctacatcttttcctgcttctcctc 27870364
>dbj|AP003928.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1150_A11 Length = 142010 Score = 230 bits (116), Expect = 4e-57 Identities = 230/268 (85%) Strand = Plus / Plus Query: 196 tgtggtcaagcggagctagcgacaagaacaaggctatggttgagcaactgcagagatatg 255 ||||||||||||| |||||||||||||||||||| ||||||||||| || ||||| || | Sbjct: 78975 tgtggtcaagcggggctagcgacaagaacaaggcaatggttgagcagctccagaggtacg 79034 Query: 256 gggtaatcaagtcgaccaaagttgcggaggtcatggagaccatcgataggggtctgtttg 315 || | |||||||||| ||| || ||| |||| |||||||||||||| ||||| ||||||| Sbjct: 79035 ggattatcaagtcgagcaaggtcgcgcaggtgatggagaccatcgacagggggctgtttg 79094 Query: 316 tgcctccgggtggttctccctattttgatagcccaatggcaattggctacaatgcaacca 375 ||||||| |||| |||||||||||| || ||||| ||| | || || ||||| || |||| Sbjct: 79095 tgcctcctggtgcttctccctatttcgacagcccgatgcccatcggttacaacgccacca 79154 Query: 376 tatctgcgcctcacatgcatgctgcttgcctggagctcctggaggatcatctgcaggctg 435 | ||||||||||||||||| || ||||| |||||||||||||| | || || ||| ||| Sbjct: 79155 tttctgcgcctcacatgcacgcctcttgcttggagctcctggagaagcaccttcagcctg 79214 Query: 436 gtatgcgggctctggatgttggatcagg 463 | ||||| |||||||||||||||||||| Sbjct: 79215 gcatgcgtgctctggatgttggatcagg 79242 Score = 89.7 bits (45), Expect = 9e-15 Identities = 66/73 (90%) Strand = Plus / Plus Query: 460 caggcactgggtacctaacagcttgctttgcacttatggttggaccgggaggacgagcag 519 ||||||| |||||||||||||||||||| || ||||||||||||| | ||| ||||||| Sbjct: 79828 caggcacagggtacctaacagcttgcttcgcgattatggttggaccagaagggcgagcag 79887 Query: 520 ttggtgttgaaca 532 ||||||||||||| Sbjct: 79888 ttggtgttgaaca 79900 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 136 tcgccatggaggtagtccgctccatcttctcctgtttctcctc 178 |||||||||||||| |||||| |||||| ||||| |||||||| Sbjct: 78400 tcgccatggaggtactccgctacatcttttcctgcttctcctc 78442
>ref|XM_472914.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 693 Score = 77.8 bits (39), Expect = 3e-11 Identities = 108/131 (82%) Strand = Plus / Plus Query: 375 atatctgcgcctcacatgcatgctgcttgcctggagctcctggaggatcatctgcaggct 434 |||||||| |||||||||||||| | ||| ||||||| ||| ||||||| ||||| | Sbjct: 190 atatctgctcctcacatgcatgcgacctgcttggagctactgaaggatcacttgcagcca 249 Query: 435 ggtatgcgggctctggatgttggatcaggcactgggtacctaacagcttgctttgcactt 494 || |||| ||||| |||||||||||||||| || ||| | |||||||| |||||| | Sbjct: 250 ggaatgcatgctctagatgttggatcaggcagcggttacttgacagcttgttttgcaatg 309 Query: 495 atggttggacc 505 ||||||||||| Sbjct: 310 atggttggacc 320
>dbj|AK105549.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-128-A09, full insert sequence Length = 2141 Score = 77.8 bits (39), Expect = 3e-11 Identities = 108/131 (82%) Strand = Plus / Plus Query: 375 atatctgcgcctcacatgcatgctgcttgcctggagctcctggaggatcatctgcaggct 434 |||||||| |||||||||||||| | ||| ||||||| ||| ||||||| ||||| | Sbjct: 1272 atatctgctcctcacatgcatgcgacctgcttggagctactgaaggatcacttgcagcca 1331 Query: 435 ggtatgcgggctctggatgttggatcaggcactgggtacctaacagcttgctttgcactt 494 || |||| ||||| |||||||||||||||| || ||| | |||||||| |||||| | Sbjct: 1332 ggaatgcatgctctagatgttggatcaggcagcggttacttgacagcttgttttgcaatg 1391 Query: 495 atggttggacc 505 ||||||||||| Sbjct: 1392 atggttggacc 1402
>gb|L07941.1|WHTISMT Triticum aestivum L-isoaspartyl methyltransferase mRNA, complete cds Length = 940 Score = 61.9 bits (31), Expect = 2e-06 Identities = 142/179 (79%) Strand = Plus / Plus Query: 357 attggctacaatgcaaccatatctgcgcctcacatgcatgctgcttgcctggagctcctg 416 ||||| ||||||||||| |||||||| ||||||||||| || | ||| | || || || Sbjct: 288 attggttacaatgcaacaatatctgctcctcacatgcacgcaacctgcttagaactgttg 347 Query: 417 gaggatcatctgcaggctggtatgcgggctctggatgttggatcaggcactgggtaccta 476 ||||| || | ||| | || |||| |||||||| ||||||||||||| ||| ||| | Sbjct: 348 aaggattatttacagccaggcatgcatgctctggacgttggatcaggcagtggttacttg 407 Query: 477 acagcttgctttgcacttatggttggaccgggaggacgagcagttggtgttgaacacat 535 || |||||||||||| | ||||| ||||| | ||| || ||||| || |||||||||| Sbjct: 408 actgcttgctttgcaatgatggtcggaccagaaggtcgcgcagtggggattgaacacat 466
>emb|AL606614.3|OSJN00047 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0011N17, complete sequence Length = 129498 Score = 58.0 bits (29), Expect = 3e-05 Identities = 74/89 (83%) Strand = Plus / Minus Query: 375 atatctgcgcctcacatgcatgctgcttgcctggagctcctggaggatcatctgcaggct 434 |||||||| |||||||||||||| | ||| ||||||| ||| ||||||| ||||| | Sbjct: 48545 atatctgctcctcacatgcatgcgacctgcttggagctactgaaggatcacttgcagcca 48486 Query: 435 ggtatgcgggctctggatgttggatcagg 463 || |||| ||||| |||||||||||||| Sbjct: 48485 ggaatgcatgctctagatgttggatcagg 48457
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 58.0 bits (29), Expect = 3e-05 Identities = 74/89 (83%) Strand = Plus / Minus Query: 375 atatctgcgcctcacatgcatgctgcttgcctggagctcctggaggatcatctgcaggct 434 |||||||| |||||||||||||| | ||| ||||||| ||| ||||||| ||||| | Sbjct: 24051566 atatctgctcctcacatgcatgcgacctgcttggagctactgaaggatcacttgcagcca 24051507 Query: 435 ggtatgcgggctctggatgttggatcagg 463 || |||| ||||| |||||||||||||| Sbjct: 24051506 ggaatgcatgctctagatgttggatcagg 24051478
>emb|AL442104.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0510A06, complete sequence Length = 90767 Score = 58.0 bits (29), Expect = 3e-05 Identities = 74/89 (83%) Strand = Plus / Minus Query: 375 atatctgcgcctcacatgcatgctgcttgcctggagctcctggaggatcatctgcaggct 434 |||||||| |||||||||||||| | ||| ||||||| ||| ||||||| ||||| | Sbjct: 17657 atatctgctcctcacatgcatgcgacctgcttggagctactgaaggatcacttgcagcca 17598 Query: 435 ggtatgcgggctctggatgttggatcagg 463 || |||| ||||| |||||||||||||| Sbjct: 17597 ggaatgcatgctctagatgttggatcagg 17569
>gb|DQ336282.1| Vitis pseudoreticulata L-isoaspartate-O-methyl transferase mRNA, complete cds Length = 750 Score = 48.1 bits (24), Expect = 0.030 Identities = 90/112 (80%) Strand = Plus / Plus Query: 427 tgcaggctggtatgcgggctctggatgttggatcaggcactgggtacctaacagcttgct 486 ||||| |||| |||| ||||| |||||||| || || || ||||| | ||||| |||| Sbjct: 242 tgcagcctggaatgcatgctctagatgttggttctggaacggggtatttgacagcctgct 301 Query: 487 ttgcacttatggttggaccgggaggacgagcagttggtgttgaacacatacc 538 ||||||| ||||||||||| ||| | |||||||| || ||||||||||| Sbjct: 302 ttgcactgatggttggaccacaaggttgtgcagttggagtagaacacatacc 353
>ref|NM_148859.2| Arabidopsis thaliana PIMT1 (PROTEIN-L-ISOASPARTATE METHYLTRANSFERASE 1); S-adenosylmethionine-dependent methyltransferase/ protein-L-isoaspartate (D> AT3G48330 (PIMT1) transcript variant AT3G48330.2 mRNA, complete cds Length = 1111 Score = 44.1 bits (22), Expect = 0.47 Identities = 46/54 (85%) Strand = Plus / Plus Query: 450 gatgttggatcaggcactgggtacctaacagcttgctttgcacttatggttgga 503 |||||||| || || || |||||| |||| ||||||||||| ||||||||||| Sbjct: 265 gatgttggctcggggaccgggtacttaactgcttgctttgcggttatggttgga 318
>ref|NM_180682.1| Arabidopsis thaliana PIMT1 (PROTEIN-L-ISOASPARTATE METHYLTRANSFERASE 1); S-adenosylmethionine-dependent methyltransferase/ protein-L-isoaspartate (D> AT3G48330 (PIMT1) transcript variant AT3G48330.1 mRNA, complete cds Length = 1247 Score = 44.1 bits (22), Expect = 0.47 Identities = 46/54 (85%) Strand = Plus / Plus Query: 450 gatgttggatcaggcactgggtacctaacagcttgctttgcacttatggttgga 503 |||||||| || || || |||||| |||| ||||||||||| ||||||||||| Sbjct: 265 gatgttggctcggggaccgggtacttaactgcttgctttgcggttatggttgga 318
>gb|AF029308.1|HTCRBCHR9 Homo sapiens chromosome 9 duplication of the T cell receptor beta locus and trypsinogen gene families Length = 216293 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 396 gctgcttgcctggagctcctggagg 420 |||||||||| |||||||||||||| Sbjct: 113628 gctgcttgcccggagctcctggagg 113604
>emb|AL356489.14| Human DNA sequence from clone RP11-384P7 on chromosome 9 Contains the TRBV25OR9-2 gene for T cell receptor beta variable 25/OR9-2, the PTENP1 gene for phosphatase and tensin homolog (mutated in multiple advanced cancers 1) pseudogene 1 (PTH2, PTEN2, PSIPTEN), a T-cell receptor beta chain V region protein pseudogene, two novel genes, the 5' end of the PRSS3 gene for serine protease 3 (mesotrypsin) and two CpG islands, complete sequence Length = 130639 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 396 gctgcttgcctggagctcctggagg 420 |||||||||| |||||||||||||| Sbjct: 64667 gctgcttgcccggagctcctggagg 64643
>ref|NG_001337.1| Homo sapiens T cell receptor beta variable orphans on chromosome 9 (TRBVOR9@) on chromosome 9 Length = 194564 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 396 gctgcttgcctggagctcctggagg 420 |||||||||| |||||||||||||| Sbjct: 113267 gctgcttgcccggagctcctggagg 113243
>dbj|AK091137.1| Homo sapiens cDNA FLJ33818 fis, clone CTONG2003115 Length = 3626 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 396 gctgcttgcctggagctcctggagg 420 |||||||||| |||||||||||||| Sbjct: 1091 gctgcttgcccggagctcctggagg 1067
>gb|AC010583.5|AC010583 Homo sapiens chromosome 11 clone RP11-61J24, complete sequence Length = 184569 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 396 gctgcttgcctggagctcctggagg 420 |||||||||| |||||||||||||| Sbjct: 168402 gctgcttgcccggagctcctggagg 168426
>dbj|AP006213.1| Homo sapiens genomic DNA, chromosome 11, clone:CMB9-59N21, complete sequence Length = 148782 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 396 gctgcttgcctggagctcctggagg 420 |||||||||| |||||||||||||| Sbjct: 41143 gctgcttgcccggagctcctggagg 41119
>ref|XM_420939.1| PREDICTED: Gallus gallus similar to Pcmt1-prov protein (LOC423008), mRNA Length = 1224 Score = 40.1 bits (20), Expect = 7.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 447 ctggatgttggatcaggcactgggtacctaacagcttgctttgc 490 |||||||||||||| || | ||| || || |||||||||||||| Sbjct: 411 ctggatgttggatctggaagtggttatcttacagcttgctttgc 454
>ref|XM_654680.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN2168.2), mRNA Length = 1305 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 cagttcctcgccatggaggt 148 |||||||||||||||||||| Sbjct: 13 cagttcctcgccatggaggt 32
>ref|XM_756229.1| Ustilago maydis 521 hypothetical protein (UM05175.1) partial mRNA Length = 1194 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 gagacttcttcctccagctc 109 |||||||||||||||||||| Sbjct: 568 gagacttcttcctccagctc 587
>gb|AE014821.1| Plasmodium falciparum 3D7 chromosome 14 section 6 of 13 of the complete sequence Length = 250823 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 371 aaccatatctgcgcctcacatgca 394 |||||||||||||||||| ||||| Sbjct: 31813 aaccatatctgcgcctcatatgca 31790
>emb|AL049659.2|ATT29H11 Arabidopsis thaliana DNA chromosome 3, BAC clone T29H11 Length = 97488 Score = 40.1 bits (20), Expect = 7.3 Identities = 32/36 (88%) Strand = Plus / Minus Query: 468 gggtacctaacagcttgctttgcacttatggttgga 503 |||||| |||| ||||||||||| ||||||||||| Sbjct: 26091 gggtacttaactgcttgctttgcggttatggttgga 26056
>gb|AC090427.2| Homo sapiens chromosome 19 clone CTD-2292J18, complete sequence Length = 109233 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 ttcctccagctccagagcct 117 |||||||||||||||||||| Sbjct: 5240 ttcctccagctccagagcct 5221
>emb|BX929703.2| Gallus gallus finished cDNA, clone ChEST804g20 Length = 1117 Score = 40.1 bits (20), Expect = 7.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 447 ctggatgttggatcaggcactgggtacctaacagcttgctttgc 490 |||||||||||||| || | ||| || || |||||||||||||| Sbjct: 411 ctggatgttggatctggaagtggttatcttacagcttgctttgc 454
>emb|BX950403.1| Gallus gallus finished cDNA, clone ChEST954d11 Length = 1040 Score = 40.1 bits (20), Expect = 7.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 447 ctggatgttggatcaggcactgggtacctaacagcttgctttgc 490 |||||||||||||| || | ||| || || |||||||||||||| Sbjct: 389 ctggatgttggatctggaagtggttatcttacagcttgctttgc 432
>emb|BX935325.1| Gallus gallus finished cDNA, clone ChEST957k17 Length = 1040 Score = 40.1 bits (20), Expect = 7.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 447 ctggatgttggatcaggcactgggtacctaacagcttgctttgc 490 |||||||||||||| || | ||| || || |||||||||||||| Sbjct: 389 ctggatgttggatctggaagtggttatcttacagcttgctttgc 432
>gb|AC022149.3|AC022149 Homo sapiens chromosome 19 clone CTD-3093B17, complete sequence Length = 39383 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 ttcctccagctccagagcct 117 |||||||||||||||||||| Sbjct: 35984 ttcctccagctccagagcct 35965
>gb|U31288.1|ATU31288 Arabidopsis thaliana L-isoaspartyl methyltransferase gene, complete cds Length = 1623 Score = 40.1 bits (20), Expect = 7.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 468 gggtacctaacagcttgctttgcacttatggttgga 503 |||||| |||| ||||||||||| ||||||||||| Sbjct: 869 gggtacttaactgcttgctttgcggttatggttgga 904 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,153,638 Number of Sequences: 3902068 Number of extensions: 4153638 Number of successful extensions: 102268 Number of sequences better than 10.0: 32 Number of HSP's better than 10.0 without gapping: 32 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 102171 Number of HSP's gapped (non-prelim): 96 length of query: 538 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 515 effective length of database: 17,143,297,704 effective search space: 8828798317560 effective search space used: 8828798317560 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)