ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags11e01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_483742.1| Oryza sativa (japonica cultivar-group), mRNA 311 1e-81
2ref|XM_507330.1| PREDICTED Oryza sativa (japonica cultivar-group... 311 1e-81
3dbj|AK100496.1| Oryza sativa (japonica cultivar-group) cDNA clon... 311 1e-81
4dbj|AK059917.1| Oryza sativa (japonica cultivar-group) cDNA clon... 311 1e-81
5dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 230 4e-57
6dbj|AP003928.3| Oryza sativa (japonica cultivar-group) genomic D... 230 4e-57
7ref|XM_472914.1| Oryza sativa (japonica cultivar-group), predic... 78 3e-11
8dbj|AK105549.1| Oryza sativa (japonica cultivar-group) cDNA clon... 78 3e-11
9gb|L07941.1|WHTISMT Triticum aestivum L-isoaspartyl methyltransf... 62 2e-06
10emb|AL606614.3|OSJN00047 Oryza sativa genomic DNA, chromosome 4,... 58 3e-05
11dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 58 3e-05
12emb|AL442104.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 58 3e-05
13gb|DQ336282.1| Vitis pseudoreticulata L-isoaspartate-O-methyl tr... 48 0.030
14ref|NM_148859.2| Arabidopsis thaliana PIMT1 (PROTEIN-L-ISOASPART... 44 0.47
15ref|NM_180682.1| Arabidopsis thaliana PIMT1 (PROTEIN-L-ISOASPART... 44 0.47
16gb|AF029308.1|HTCRBCHR9 Homo sapiens chromosome 9 duplication of... 42 1.8
17emb|AL356489.14| Human DNA sequence from clone RP11-384P7 on chr... 42 1.8
18ref|NG_001337.1| Homo sapiens T cell receptor beta variable orph... 42 1.8
19dbj|AK091137.1| Homo sapiens cDNA FLJ33818 fis, clone CTONG2003115 42 1.8
20gb|AC010583.5|AC010583 Homo sapiens chromosome 11 clone RP11-61J... 42 1.8
21dbj|AP006213.1| Homo sapiens genomic DNA, chromosome 11, clone:C... 42 1.8
22ref|XM_420939.1| PREDICTED: Gallus gallus similar to Pcmt1-prov ... 40 7.3
23ref|XM_654680.1| Aspergillus nidulans FGSC A4 hypothetical prote... 40 7.3
24ref|XM_756229.1| Ustilago maydis 521 hypothetical protein (UM051... 40 7.3
25gb|AE014821.1| Plasmodium falciparum 3D7 chromosome 14 section 6... 40 7.3
26emb|AL049659.2|ATT29H11 Arabidopsis thaliana DNA chromosome 3, B... 40 7.3
27gb|AC090427.2| Homo sapiens chromosome 19 clone CTD-2292J18, com... 40 7.3
28emb|BX929703.2| Gallus gallus finished cDNA, clone ChEST804g20 40 7.3
29emb|BX950403.1| Gallus gallus finished cDNA, clone ChEST954d11 40 7.3
30emb|BX935325.1| Gallus gallus finished cDNA, clone ChEST957k17 40 7.3
31gb|AC022149.3|AC022149 Homo sapiens chromosome 19 clone CTD-3093... 40 7.3
32gb|U31288.1|ATU31288 Arabidopsis thaliana L-isoaspartyl methyltr... 40 7.3

>ref|XM_483742.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1054

 Score =  311 bits (157), Expect = 1e-81
 Identities = 292/337 (86%)
 Strand = Plus / Plus

                                                                       
Query: 196 tgtggtcaagcggagctagcgacaagaacaaggctatggttgagcaactgcagagatatg 255
           ||||||||||||| |||||||||||||||||||| ||||||||||| || ||||| || |
Sbjct: 199 tgtggtcaagcggggctagcgacaagaacaaggcaatggttgagcagctccagaggtacg 258

                                                                       
Query: 256 gggtaatcaagtcgaccaaagttgcggaggtcatggagaccatcgataggggtctgtttg 315
           || | |||||||||| ||| || ||| |||| |||||||||||||| ||||| |||||||
Sbjct: 259 ggattatcaagtcgagcaaggtcgcgcaggtgatggagaccatcgacagggggctgtttg 318

                                                                       
Query: 316 tgcctccgggtggttctccctattttgatagcccaatggcaattggctacaatgcaacca 375
           ||||||| |||| |||||||||||| || ||||| ||| | || || ||||| || ||||
Sbjct: 319 tgcctcctggtgcttctccctatttcgacagcccgatgcccatcggttacaacgccacca 378

                                                                       
Query: 376 tatctgcgcctcacatgcatgctgcttgcctggagctcctggaggatcatctgcaggctg 435
           | ||||||||||||||||| ||  ||||| |||||||||||||| | || || ||| |||
Sbjct: 379 tttctgcgcctcacatgcacgcctcttgcttggagctcctggagaagcaccttcagcctg 438

                                                                       
Query: 436 gtatgcgggctctggatgttggatcaggcactgggtacctaacagcttgctttgcactta 495
           | ||||| ||||||||||||||||||||||| |||||||||||||||||||| ||  |||
Sbjct: 439 gcatgcgtgctctggatgttggatcaggcacagggtacctaacagcttgcttcgcgatta 498

                                                
Query: 496 tggttggaccgggaggacgagcagttggtgttgaaca 532
           |||||||||| | ||| ||||||||||||||||||||
Sbjct: 499 tggttggaccagaagggcgagcagttggtgttgaaca 535



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>ref|XM_507330.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1150_A11.18
           mRNA
          Length = 1064

 Score =  311 bits (157), Expect = 1e-81
 Identities = 292/337 (86%)
 Strand = Plus / Plus

                                                                       
Query: 196 tgtggtcaagcggagctagcgacaagaacaaggctatggttgagcaactgcagagatatg 255
           ||||||||||||| |||||||||||||||||||| ||||||||||| || ||||| || |
Sbjct: 208 tgtggtcaagcggggctagcgacaagaacaaggcaatggttgagcagctccagaggtacg 267

                                                                       
Query: 256 gggtaatcaagtcgaccaaagttgcggaggtcatggagaccatcgataggggtctgtttg 315
           || | |||||||||| ||| || ||| |||| |||||||||||||| ||||| |||||||
Sbjct: 268 ggattatcaagtcgagcaaggtcgcgcaggtgatggagaccatcgacagggggctgtttg 327

                                                                       
Query: 316 tgcctccgggtggttctccctattttgatagcccaatggcaattggctacaatgcaacca 375
           ||||||| |||| |||||||||||| || ||||| ||| | || || ||||| || ||||
Sbjct: 328 tgcctcctggtgcttctccctatttcgacagcccgatgcccatcggttacaacgccacca 387

                                                                       
Query: 376 tatctgcgcctcacatgcatgctgcttgcctggagctcctggaggatcatctgcaggctg 435
           | ||||||||||||||||| ||  ||||| |||||||||||||| | || || ||| |||
Sbjct: 388 tttctgcgcctcacatgcacgcctcttgcttggagctcctggagaagcaccttcagcctg 447

                                                                       
Query: 436 gtatgcgggctctggatgttggatcaggcactgggtacctaacagcttgctttgcactta 495
           | ||||| ||||||||||||||||||||||| |||||||||||||||||||| ||  |||
Sbjct: 448 gcatgcgtgctctggatgttggatcaggcacagggtacctaacagcttgcttcgcgatta 507

                                                
Query: 496 tggttggaccgggaggacgagcagttggtgttgaaca 532
           |||||||||| | ||| ||||||||||||||||||||
Sbjct: 508 tggttggaccagaagggcgagcagttggtgttgaaca 544



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>dbj|AK100496.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099B17, full
           insert sequence
          Length = 1064

 Score =  311 bits (157), Expect = 1e-81
 Identities = 292/337 (86%)
 Strand = Plus / Plus

                                                                       
Query: 196 tgtggtcaagcggagctagcgacaagaacaaggctatggttgagcaactgcagagatatg 255
           ||||||||||||| |||||||||||||||||||| ||||||||||| || ||||| || |
Sbjct: 208 tgtggtcaagcggggctagcgacaagaacaaggcaatggttgagcagctccagaggtacg 267

                                                                       
Query: 256 gggtaatcaagtcgaccaaagttgcggaggtcatggagaccatcgataggggtctgtttg 315
           || | |||||||||| ||| || ||| |||| |||||||||||||| ||||| |||||||
Sbjct: 268 ggattatcaagtcgagcaaggtcgcgcaggtgatggagaccatcgacagggggctgtttg 327

                                                                       
Query: 316 tgcctccgggtggttctccctattttgatagcccaatggcaattggctacaatgcaacca 375
           ||||||| |||| |||||||||||| || ||||| ||| | || || ||||| || ||||
Sbjct: 328 tgcctcctggtgcttctccctatttcgacagcccgatgcccatcggttacaacgccacca 387

                                                                       
Query: 376 tatctgcgcctcacatgcatgctgcttgcctggagctcctggaggatcatctgcaggctg 435
           | ||||||||||||||||| ||  ||||| |||||||||||||| | || || ||| |||
Sbjct: 388 tttctgcgcctcacatgcacgcctcttgcttggagctcctggagaagcaccttcagcctg 447

                                                                       
Query: 436 gtatgcgggctctggatgttggatcaggcactgggtacctaacagcttgctttgcactta 495
           | ||||| ||||||||||||||||||||||| |||||||||||||||||||| ||  |||
Sbjct: 448 gcatgcgtgctctggatgttggatcaggcacagggtacctaacagcttgcttcgcgatta 507

                                                
Query: 496 tggttggaccgggaggacgagcagttggtgttgaaca 532
           |||||||||| | ||| ||||||||||||||||||||
Sbjct: 508 tggttggaccagaagggcgagcagttggtgttgaaca 544



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>dbj|AK059917.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-209-F04, full
           insert sequence
          Length = 1054

 Score =  311 bits (157), Expect = 1e-81
 Identities = 292/337 (86%)
 Strand = Plus / Plus

                                                                       
Query: 196 tgtggtcaagcggagctagcgacaagaacaaggctatggttgagcaactgcagagatatg 255
           ||||||||||||| |||||||||||||||||||| ||||||||||| || ||||| || |
Sbjct: 199 tgtggtcaagcggggctagcgacaagaacaaggcaatggttgagcagctccagaggtacg 258

                                                                       
Query: 256 gggtaatcaagtcgaccaaagttgcggaggtcatggagaccatcgataggggtctgtttg 315
           || | |||||||||| ||| || ||| |||| |||||||||||||| ||||| |||||||
Sbjct: 259 ggattatcaagtcgagcaaggtcgcgcaggtgatggagaccatcgacagggggctgtttg 318

                                                                       
Query: 316 tgcctccgggtggttctccctattttgatagcccaatggcaattggctacaatgcaacca 375
           ||||||| |||| |||||||||||| || ||||| ||| | || || ||||| || ||||
Sbjct: 319 tgcctcctggtgcttctccctatttcgacagcccgatgcccatcggttacaacgccacca 378

                                                                       
Query: 376 tatctgcgcctcacatgcatgctgcttgcctggagctcctggaggatcatctgcaggctg 435
           | ||||||||||||||||| ||  ||||| |||||||||||||| | || || ||| |||
Sbjct: 379 tttctgcgcctcacatgcacgcctcttgcttggagctcctggagaagcaccttcagcctg 438

                                                                       
Query: 436 gtatgcgggctctggatgttggatcaggcactgggtacctaacagcttgctttgcactta 495
           | ||||| ||||||||||||||||||||||| |||||||||||||||||||| ||  |||
Sbjct: 439 gcatgcgtgctctggatgttggatcaggcacagggtacctaacagcttgcttcgcgatta 498

                                                
Query: 496 tggttggaccgggaggacgagcagttggtgttgaaca 532
           |||||||||| | ||| ||||||||||||||||||||
Sbjct: 499 tggttggaccagaagggcgagcagttggtgttgaaca 535



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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  230 bits (116), Expect = 4e-57
 Identities = 230/268 (85%)
 Strand = Plus / Plus

                                                                            
Query: 196      tgtggtcaagcggagctagcgacaagaacaaggctatggttgagcaactgcagagatatg 255
                ||||||||||||| |||||||||||||||||||| ||||||||||| || ||||| || |
Sbjct: 27870897 tgtggtcaagcggggctagcgacaagaacaaggcaatggttgagcagctccagaggtacg 27870956

                                                                            
Query: 256      gggtaatcaagtcgaccaaagttgcggaggtcatggagaccatcgataggggtctgtttg 315
                || | |||||||||| ||| || ||| |||| |||||||||||||| ||||| |||||||
Sbjct: 27870957 ggattatcaagtcgagcaaggtcgcgcaggtgatggagaccatcgacagggggctgtttg 27871016

                                                                            
Query: 316      tgcctccgggtggttctccctattttgatagcccaatggcaattggctacaatgcaacca 375
                ||||||| |||| |||||||||||| || ||||| ||| | || || ||||| || ||||
Sbjct: 27871017 tgcctcctggtgcttctccctatttcgacagcccgatgcccatcggttacaacgccacca 27871076

                                                                            
Query: 376      tatctgcgcctcacatgcatgctgcttgcctggagctcctggaggatcatctgcaggctg 435
                | ||||||||||||||||| ||  ||||| |||||||||||||| | || || ||| |||
Sbjct: 27871077 tttctgcgcctcacatgcacgcctcttgcttggagctcctggagaagcaccttcagcctg 27871136

                                            
Query: 436      gtatgcgggctctggatgttggatcagg 463
                | ||||| ||||||||||||||||||||
Sbjct: 27871137 gcatgcgtgctctggatgttggatcagg 27871164



 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 66/73 (90%)
 Strand = Plus / Plus

                                                                            
Query: 460      caggcactgggtacctaacagcttgctttgcacttatggttggaccgggaggacgagcag 519
                ||||||| |||||||||||||||||||| ||  ||||||||||||| | ||| |||||||
Sbjct: 27871750 caggcacagggtacctaacagcttgcttcgcgattatggttggaccagaagggcgagcag 27871809

                             
Query: 520      ttggtgttgaaca 532
                |||||||||||||
Sbjct: 27871810 ttggtgttgaaca 27871822



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                           
Query: 136      tcgccatggaggtagtccgctccatcttctcctgtttctcctc 178
                |||||||||||||| |||||| |||||| ||||| ||||||||
Sbjct: 27870322 tcgccatggaggtactccgctacatcttttcctgcttctcctc 27870364



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>dbj|AP003928.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1150_A11
          Length = 142010

 Score =  230 bits (116), Expect = 4e-57
 Identities = 230/268 (85%)
 Strand = Plus / Plus

                                                                         
Query: 196   tgtggtcaagcggagctagcgacaagaacaaggctatggttgagcaactgcagagatatg 255
             ||||||||||||| |||||||||||||||||||| ||||||||||| || ||||| || |
Sbjct: 78975 tgtggtcaagcggggctagcgacaagaacaaggcaatggttgagcagctccagaggtacg 79034

                                                                         
Query: 256   gggtaatcaagtcgaccaaagttgcggaggtcatggagaccatcgataggggtctgtttg 315
             || | |||||||||| ||| || ||| |||| |||||||||||||| ||||| |||||||
Sbjct: 79035 ggattatcaagtcgagcaaggtcgcgcaggtgatggagaccatcgacagggggctgtttg 79094

                                                                         
Query: 316   tgcctccgggtggttctccctattttgatagcccaatggcaattggctacaatgcaacca 375
             ||||||| |||| |||||||||||| || ||||| ||| | || || ||||| || ||||
Sbjct: 79095 tgcctcctggtgcttctccctatttcgacagcccgatgcccatcggttacaacgccacca 79154

                                                                         
Query: 376   tatctgcgcctcacatgcatgctgcttgcctggagctcctggaggatcatctgcaggctg 435
             | ||||||||||||||||| ||  ||||| |||||||||||||| | || || ||| |||
Sbjct: 79155 tttctgcgcctcacatgcacgcctcttgcttggagctcctggagaagcaccttcagcctg 79214

                                         
Query: 436   gtatgcgggctctggatgttggatcagg 463
             | ||||| ||||||||||||||||||||
Sbjct: 79215 gcatgcgtgctctggatgttggatcagg 79242



 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 66/73 (90%)
 Strand = Plus / Plus

                                                                         
Query: 460   caggcactgggtacctaacagcttgctttgcacttatggttggaccgggaggacgagcag 519
             ||||||| |||||||||||||||||||| ||  ||||||||||||| | ||| |||||||
Sbjct: 79828 caggcacagggtacctaacagcttgcttcgcgattatggttggaccagaagggcgagcag 79887

                          
Query: 520   ttggtgttgaaca 532
             |||||||||||||
Sbjct: 79888 ttggtgttgaaca 79900



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                        
Query: 136   tcgccatggaggtagtccgctccatcttctcctgtttctcctc 178
             |||||||||||||| |||||| |||||| ||||| ||||||||
Sbjct: 78400 tcgccatggaggtactccgctacatcttttcctgcttctcctc 78442



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>ref|XM_472914.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 693

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 108/131 (82%)
 Strand = Plus / Plus

                                                                       
Query: 375 atatctgcgcctcacatgcatgctgcttgcctggagctcctggaggatcatctgcaggct 434
           |||||||| ||||||||||||||  | ||| ||||||| ||| |||||||  ||||| | 
Sbjct: 190 atatctgctcctcacatgcatgcgacctgcttggagctactgaaggatcacttgcagcca 249

                                                                       
Query: 435 ggtatgcgggctctggatgttggatcaggcactgggtacctaacagcttgctttgcactt 494
           || ||||  ||||| ||||||||||||||||  || ||| | |||||||| |||||| | 
Sbjct: 250 ggaatgcatgctctagatgttggatcaggcagcggttacttgacagcttgttttgcaatg 309

                      
Query: 495 atggttggacc 505
           |||||||||||
Sbjct: 310 atggttggacc 320



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>dbj|AK105549.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-128-A09, full
            insert sequence
          Length = 2141

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 108/131 (82%)
 Strand = Plus / Plus

                                                                        
Query: 375  atatctgcgcctcacatgcatgctgcttgcctggagctcctggaggatcatctgcaggct 434
            |||||||| ||||||||||||||  | ||| ||||||| ||| |||||||  ||||| | 
Sbjct: 1272 atatctgctcctcacatgcatgcgacctgcttggagctactgaaggatcacttgcagcca 1331

                                                                        
Query: 435  ggtatgcgggctctggatgttggatcaggcactgggtacctaacagcttgctttgcactt 494
            || ||||  ||||| ||||||||||||||||  || ||| | |||||||| |||||| | 
Sbjct: 1332 ggaatgcatgctctagatgttggatcaggcagcggttacttgacagcttgttttgcaatg 1391

                       
Query: 495  atggttggacc 505
            |||||||||||
Sbjct: 1392 atggttggacc 1402



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>gb|L07941.1|WHTISMT Triticum aestivum L-isoaspartyl methyltransferase mRNA, complete
           cds
          Length = 940

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 142/179 (79%)
 Strand = Plus / Plus

                                                                       
Query: 357 attggctacaatgcaaccatatctgcgcctcacatgcatgctgcttgcctggagctcctg 416
           ||||| ||||||||||| |||||||| ||||||||||| ||  | ||| | || ||  ||
Sbjct: 288 attggttacaatgcaacaatatctgctcctcacatgcacgcaacctgcttagaactgttg 347

                                                                       
Query: 417 gaggatcatctgcaggctggtatgcgggctctggatgttggatcaggcactgggtaccta 476
            ||||| || | ||| | || ||||  |||||||| ||||||||||||| ||| ||| | 
Sbjct: 348 aaggattatttacagccaggcatgcatgctctggacgttggatcaggcagtggttacttg 407

                                                                      
Query: 477 acagcttgctttgcacttatggttggaccgggaggacgagcagttggtgttgaacacat 535
           || |||||||||||| | ||||| ||||| | ||| || ||||| ||  ||||||||||
Sbjct: 408 actgcttgctttgcaatgatggtcggaccagaaggtcgcgcagtggggattgaacacat 466



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>emb|AL606614.3|OSJN00047 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0011N17,
             complete sequence
          Length = 129498

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 74/89 (83%)
 Strand = Plus / Minus

                                                                         
Query: 375   atatctgcgcctcacatgcatgctgcttgcctggagctcctggaggatcatctgcaggct 434
             |||||||| ||||||||||||||  | ||| ||||||| ||| |||||||  ||||| | 
Sbjct: 48545 atatctgctcctcacatgcatgcgacctgcttggagctactgaaggatcacttgcagcca 48486

                                          
Query: 435   ggtatgcgggctctggatgttggatcagg 463
             || ||||  ||||| ||||||||||||||
Sbjct: 48485 ggaatgcatgctctagatgttggatcagg 48457



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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 74/89 (83%)
 Strand = Plus / Minus

                                                                            
Query: 375      atatctgcgcctcacatgcatgctgcttgcctggagctcctggaggatcatctgcaggct 434
                |||||||| ||||||||||||||  | ||| ||||||| ||| |||||||  ||||| | 
Sbjct: 24051566 atatctgctcctcacatgcatgcgacctgcttggagctactgaaggatcacttgcagcca 24051507

                                             
Query: 435      ggtatgcgggctctggatgttggatcagg 463
                || ||||  ||||| ||||||||||||||
Sbjct: 24051506 ggaatgcatgctctagatgttggatcagg 24051478



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>emb|AL442104.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0510A06, complete
             sequence
          Length = 90767

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 74/89 (83%)
 Strand = Plus / Minus

                                                                         
Query: 375   atatctgcgcctcacatgcatgctgcttgcctggagctcctggaggatcatctgcaggct 434
             |||||||| ||||||||||||||  | ||| ||||||| ||| |||||||  ||||| | 
Sbjct: 17657 atatctgctcctcacatgcatgcgacctgcttggagctactgaaggatcacttgcagcca 17598

                                          
Query: 435   ggtatgcgggctctggatgttggatcagg 463
             || ||||  ||||| ||||||||||||||
Sbjct: 17597 ggaatgcatgctctagatgttggatcagg 17569



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>gb|DQ336282.1| Vitis pseudoreticulata L-isoaspartate-O-methyl transferase mRNA,
           complete cds
          Length = 750

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 90/112 (80%)
 Strand = Plus / Plus

                                                                       
Query: 427 tgcaggctggtatgcgggctctggatgttggatcaggcactgggtacctaacagcttgct 486
           ||||| |||| ||||  ||||| |||||||| || || || |||||  | ||||| ||||
Sbjct: 242 tgcagcctggaatgcatgctctagatgttggttctggaacggggtatttgacagcctgct 301

                                                               
Query: 487 ttgcacttatggttggaccgggaggacgagcagttggtgttgaacacatacc 538
           ||||||| |||||||||||   |||  | |||||||| || |||||||||||
Sbjct: 302 ttgcactgatggttggaccacaaggttgtgcagttggagtagaacacatacc 353



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>ref|NM_148859.2| Arabidopsis thaliana PIMT1 (PROTEIN-L-ISOASPARTATE
           METHYLTRANSFERASE 1); S-adenosylmethionine-dependent
           methyltransferase/ protein-L-isoaspartate (D> AT3G48330
           (PIMT1) transcript variant AT3G48330.2 mRNA, complete
           cds
          Length = 1111

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                 
Query: 450 gatgttggatcaggcactgggtacctaacagcttgctttgcacttatggttgga 503
           |||||||| || || || |||||| |||| |||||||||||  |||||||||||
Sbjct: 265 gatgttggctcggggaccgggtacttaactgcttgctttgcggttatggttgga 318



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>ref|NM_180682.1| Arabidopsis thaliana PIMT1 (PROTEIN-L-ISOASPARTATE
           METHYLTRANSFERASE 1); S-adenosylmethionine-dependent
           methyltransferase/ protein-L-isoaspartate (D> AT3G48330
           (PIMT1) transcript variant AT3G48330.1 mRNA, complete
           cds
          Length = 1247

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                 
Query: 450 gatgttggatcaggcactgggtacctaacagcttgctttgcacttatggttgga 503
           |||||||| || || || |||||| |||| |||||||||||  |||||||||||
Sbjct: 265 gatgttggctcggggaccgggtacttaactgcttgctttgcggttatggttgga 318



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>gb|AF029308.1|HTCRBCHR9 Homo sapiens chromosome 9 duplication of the T cell receptor beta locus
              and trypsinogen gene families
          Length = 216293

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 396    gctgcttgcctggagctcctggagg 420
              |||||||||| ||||||||||||||
Sbjct: 113628 gctgcttgcccggagctcctggagg 113604



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>emb|AL356489.14| Human DNA sequence from clone RP11-384P7 on chromosome 9 Contains the
             TRBV25OR9-2 gene for T cell receptor beta variable
             25/OR9-2, the PTENP1 gene for phosphatase and tensin
             homolog (mutated in multiple advanced cancers 1)
             pseudogene 1 (PTH2, PTEN2, PSIPTEN), a T-cell receptor
             beta chain V region protein pseudogene, two novel genes,
             the 5' end of the PRSS3 gene for serine protease 3
             (mesotrypsin) and two CpG islands, complete sequence
          Length = 130639

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 396   gctgcttgcctggagctcctggagg 420
             |||||||||| ||||||||||||||
Sbjct: 64667 gctgcttgcccggagctcctggagg 64643



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>ref|NG_001337.1| Homo sapiens T cell receptor beta variable orphans on chromosome 9
              (TRBVOR9@) on chromosome 9
          Length = 194564

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 396    gctgcttgcctggagctcctggagg 420
              |||||||||| ||||||||||||||
Sbjct: 113267 gctgcttgcccggagctcctggagg 113243



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>dbj|AK091137.1| Homo sapiens cDNA FLJ33818 fis, clone CTONG2003115
          Length = 3626

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 396  gctgcttgcctggagctcctggagg 420
            |||||||||| ||||||||||||||
Sbjct: 1091 gctgcttgcccggagctcctggagg 1067



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>gb|AC010583.5|AC010583 Homo sapiens chromosome 11 clone RP11-61J24, complete sequence
          Length = 184569

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 396    gctgcttgcctggagctcctggagg 420
              |||||||||| ||||||||||||||
Sbjct: 168402 gctgcttgcccggagctcctggagg 168426



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>dbj|AP006213.1| Homo sapiens genomic DNA, chromosome 11, clone:CMB9-59N21, complete
             sequence
          Length = 148782

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 396   gctgcttgcctggagctcctggagg 420
             |||||||||| ||||||||||||||
Sbjct: 41143 gctgcttgcccggagctcctggagg 41119



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>ref|XM_420939.1| PREDICTED: Gallus gallus similar to Pcmt1-prov protein (LOC423008),
           mRNA
          Length = 1224

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                       
Query: 447 ctggatgttggatcaggcactgggtacctaacagcttgctttgc 490
           |||||||||||||| || | ||| || || ||||||||||||||
Sbjct: 411 ctggatgttggatctggaagtggttatcttacagcttgctttgc 454



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>ref|XM_654680.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN2168.2), mRNA
          Length = 1305

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 129 cagttcctcgccatggaggt 148
           ||||||||||||||||||||
Sbjct: 13  cagttcctcgccatggaggt 32



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>ref|XM_756229.1| Ustilago maydis 521 hypothetical protein (UM05175.1) partial mRNA
          Length = 1194

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 90  gagacttcttcctccagctc 109
           ||||||||||||||||||||
Sbjct: 568 gagacttcttcctccagctc 587



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>gb|AE014821.1| Plasmodium falciparum 3D7 chromosome 14 section 6 of 13 of the complete
             sequence
          Length = 250823

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 371   aaccatatctgcgcctcacatgca 394
             |||||||||||||||||| |||||
Sbjct: 31813 aaccatatctgcgcctcatatgca 31790



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>emb|AL049659.2|ATT29H11 Arabidopsis thaliana DNA chromosome 3, BAC clone T29H11
          Length = 97488

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                 
Query: 468   gggtacctaacagcttgctttgcacttatggttgga 503
             |||||| |||| |||||||||||  |||||||||||
Sbjct: 26091 gggtacttaactgcttgctttgcggttatggttgga 26056



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>gb|AC090427.2| Homo sapiens chromosome 19 clone CTD-2292J18, complete sequence
          Length = 109233

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 98   ttcctccagctccagagcct 117
            ||||||||||||||||||||
Sbjct: 5240 ttcctccagctccagagcct 5221



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>emb|BX929703.2| Gallus gallus finished cDNA, clone ChEST804g20
          Length = 1117

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                       
Query: 447 ctggatgttggatcaggcactgggtacctaacagcttgctttgc 490
           |||||||||||||| || | ||| || || ||||||||||||||
Sbjct: 411 ctggatgttggatctggaagtggttatcttacagcttgctttgc 454



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>emb|BX950403.1| Gallus gallus finished cDNA, clone ChEST954d11
          Length = 1040

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                       
Query: 447 ctggatgttggatcaggcactgggtacctaacagcttgctttgc 490
           |||||||||||||| || | ||| || || ||||||||||||||
Sbjct: 389 ctggatgttggatctggaagtggttatcttacagcttgctttgc 432



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>emb|BX935325.1| Gallus gallus finished cDNA, clone ChEST957k17
          Length = 1040

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                       
Query: 447 ctggatgttggatcaggcactgggtacctaacagcttgctttgc 490
           |||||||||||||| || | ||| || || ||||||||||||||
Sbjct: 389 ctggatgttggatctggaagtggttatcttacagcttgctttgc 432



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>gb|AC022149.3|AC022149 Homo sapiens chromosome 19 clone CTD-3093B17, complete sequence
          Length = 39383

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 98    ttcctccagctccagagcct 117
             ||||||||||||||||||||
Sbjct: 35984 ttcctccagctccagagcct 35965



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>gb|U31288.1|ATU31288 Arabidopsis thaliana L-isoaspartyl methyltransferase gene, complete
           cds
          Length = 1623

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 468 gggtacctaacagcttgctttgcacttatggttgga 503
           |||||| |||| |||||||||||  |||||||||||
Sbjct: 869 gggtacttaactgcttgctttgcggttatggttgga 904


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,153,638
Number of Sequences: 3902068
Number of extensions: 4153638
Number of successful extensions: 102268
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 102171
Number of HSP's gapped (non-prelim): 96
length of query: 538
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 515
effective length of database: 17,143,297,704
effective search space: 8828798317560
effective search space used: 8828798317560
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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