>ref|NM_184998.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1580

 Score =  210 bits (106), Expect = 2e-51
 Identities = 272/332 (81%), Gaps = 1/332 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   acatccgtgaagtggattctatactccaggttgngcgatgttttgaagatgatgatattg 63
           |||||||||| || ||||| || || ||||||| ||||||||||||||||||||||||||
Sbjct: 464 acatccgtgaggttgattccatccttcaggttgtgcgatgttttgaagatgatgatattg 523

                                                                       
Query: 64  ttcacgtgaatggaaaagnctgatcccangtcagatatngatgtgattaacttagaactc 123
           |||| |||| ||| ||||  ||||||||  |||||||| ||||| |||||  | || || 
Sbjct: 524 ttcatgtgagtgggaaagt-tgatcccaaatcagatattgatgtaattaatctggagctt 582

                                                                       
Query: 124 atattttgtgatcttgaacagatagagaagagattgnataagcttaaaaagagcaannct 183
           ||||||| ||||||||| ||||||||||| ||| || |||||||||||||||||||  ||
Sbjct: 583 atattttctgatcttgaccagatagagaaaagactggataagcttaaaaagagcaaaact 642

                                                                       
Query: 184 aangatccacaantaanannganggaaggagcggaaaggtcaggattngaaaaaattctg 243
           || || |  ||| |||     | ||||  ||| || ||| | ||||| |||||||||| |
Sbjct: 643 aaagaccagcaagtaaaggtcaaggaacaagcagagaggactggattggaaaaaattcag 702

                                                                       
Query: 244 gatgcacttatggatggaaagcctgcaagatctgttgatttgcctgaccntgagaaagaa 303
             || ||||||||||||||| ||||| ||||||||||||||| |||||| ||||||||||
Sbjct: 703 actgtacttatggatggaaaacctgctagatctgttgatttggctgaccatgagaaagaa 762

                                           
Query: 304 gctntacnncatctttatctgctcactatgaa 335
           ||| | |  ||||||| ||| || ||||||||
Sbjct: 763 gctatccaacatctttgtctactaactatgaa 794

>dbj|AK065910.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013045L16, full
            insert sequence
          Length = 2215

 Score =  198 bits (100), Expect = 8e-48
 Identities = 251/306 (82%), Gaps = 1/306 (0%)
 Strand = Plus / Plus

                                                                        
Query: 30   caggttgngcgatgttttgaagatgatgatattgttcacgtgaatggaaaagnctgatcc 89
            ||||||| |||||||||||||||||||||||||||||| |||| ||| ||||  ||||||
Sbjct: 1121 caggttgtgcgatgttttgaagatgatgatattgttcatgtgagtgggaaagt-tgatcc 1179

                                                                        
Query: 90   cangtcagatatngatgtgattaacttagaactcatattttgtgatcttgaacagataga 149
            ||  |||||||| ||||| |||||  | || || ||||||| ||||||||| ||||||||
Sbjct: 1180 caaatcagatattgatgtaattaatctggagcttatattttctgatcttgaccagataga 1239

                                                                        
Query: 150  gaagagattgnataagcttaaaaagagcaannctaangatccacaantaananngangga 209
            ||| ||| || |||||||||||||||||||  |||| || |  ||| |||     | |||
Sbjct: 1240 gaaaagactggataagcttaaaaagagcaaaactaaagaccagcaagtaaaggtcaagga 1299

                                                                        
Query: 210  aggagcggaaaggtcaggattngaaaaaattctggatgcacttatggatggaaagcctgc 269
            |  ||| || ||| | ||||| |||||||||| |  || ||||||||||||||| |||||
Sbjct: 1300 acaagcagagaggactggattggaaaaaattcagactgtacttatggatggaaaacctgc 1359

                                                                        
Query: 270  aagatctgttgatttgcctgaccntgagaaagaagctntacnncatctttatctgctcac 329
             ||||||||||||||| |||||| ||||||||||||| | |  ||||||| ||| || ||
Sbjct: 1360 tagatctgttgatttggctgaccatgagaaagaagctatccaacatctttgtctactaac 1419

                  
Query: 330  tatgaa 335
            ||||||
Sbjct: 1420 tatgaa 1425

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  101 bits (51), Expect = 1e-18
 Identities = 94/110 (85%)
 Strand = Plus / Minus

                                                                            
Query: 226      ggattngaaaaaattctggatgcacttatggatggaaagcctgcaagatctgttgatttg 285
                ||||| |||||||||| |  || ||||||||||||||| ||||| |||||||||||||||
Sbjct: 32082350 ggattggaaaaaattcagactgtacttatggatggaaaacctgctagatctgttgatttg 32082291

                                                                  
Query: 286      cctgaccntgagaaagaagctntacnncatctttatctgctcactatgaa 335
                 |||||| ||||||||||||| | |  ||||||| ||| || ||||||||
Sbjct: 32082290 gctgaccatgagaaagaagctatccaacatctttgtctactaactatgaa 32082241



 Score = 93.7 bits (47), Expect = 3e-16
 Identities = 95/111 (85%), Gaps = 1/111 (0%)
 Strand = Plus / Minus

                                                                            
Query: 30       caggttgngcgatgttttgaagatgatgatattgttcacgtgaatggaaaagnctgatcc 89
                ||||||| |||||||||||||||||||||||||||||| |||| ||| ||||  ||||||
Sbjct: 32082738 caggttgtgcgatgttttgaagatgatgatattgttcatgtgagtgggaaagt-tgatcc 32082680

                                                                   
Query: 90       cangtcagatatngatgtgattaacttagaactcatattttgtgatcttga 140
                ||  |||||||| ||||| |||||  | || || ||||||| |||||||||
Sbjct: 32082679 caaatcagatattgatgtaattaatctggagcttatattttctgatcttga 32082629



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                      
Query: 142      cagatagagaagagattgnataagcttaaaaagagcaa 179
                ||||||||||| ||| || |||||||||||||||||||
Sbjct: 32082502 cagatagagaaaagactggataagcttaaaaagagcaa 32082465

>gb|AC084320.10| Oryza sativa chromosome 3 BAC OSJNBa0091J19 genomic sequence, complete
             sequence
          Length = 178158

 Score =  101 bits (51), Expect = 1e-18
 Identities = 94/110 (85%)
 Strand = Plus / Minus

                                                                         
Query: 226   ggattngaaaaaattctggatgcacttatggatggaaagcctgcaagatctgttgatttg 285
             ||||| |||||||||| |  || ||||||||||||||| ||||| |||||||||||||||
Sbjct: 83475 ggattggaaaaaattcagactgtacttatggatggaaaacctgctagatctgttgatttg 83416

                                                               
Query: 286   cctgaccntgagaaagaagctntacnncatctttatctgctcactatgaa 335
              |||||| ||||||||||||| | |  ||||||| ||| || ||||||||
Sbjct: 83415 gctgaccatgagaaagaagctatccaacatctttgtctactaactatgaa 83366



 Score = 93.7 bits (47), Expect = 3e-16
 Identities = 95/111 (85%), Gaps = 1/111 (0%)
 Strand = Plus / Minus

                                                                         
Query: 30    caggttgngcgatgttttgaagatgatgatattgttcacgtgaatggaaaagnctgatcc 89
             ||||||| |||||||||||||||||||||||||||||| |||| ||| ||||  ||||||
Sbjct: 83863 caggttgtgcgatgttttgaagatgatgatattgttcatgtgagtgggaaagt-tgatcc 83805

                                                                
Query: 90    cangtcagatatngatgtgattaacttagaactcatattttgtgatcttga 140
             ||  |||||||| ||||| |||||  | || || ||||||| |||||||||
Sbjct: 83804 caaatcagatattgatgtaattaatctggagcttatattttctgatcttga 83754



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                   
Query: 142   cagatagagaagagattgnataagcttaaaaagagcaa 179
             ||||||||||| ||| || |||||||||||||||||||
Sbjct: 83627 cagatagagaaaagactggataagcttaaaaagagcaa 83590

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  101 bits (51), Expect = 1e-18
 Identities = 94/110 (85%)
 Strand = Plus / Minus

                                                                            
Query: 226      ggattngaaaaaattctggatgcacttatggatggaaagcctgcaagatctgttgatttg 285
                ||||| |||||||||| |  || ||||||||||||||| ||||| |||||||||||||||
Sbjct: 32172862 ggattggaaaaaattcagactgtacttatggatggaaaacctgctagatctgttgatttg 32172803

                                                                  
Query: 286      cctgaccntgagaaagaagctntacnncatctttatctgctcactatgaa 335
                 |||||| ||||||||||||| | |  ||||||| ||| || ||||||||
Sbjct: 32172802 gctgaccatgagaaagaagctatccaacatctttgtctactaactatgaa 32172753



 Score = 93.7 bits (47), Expect = 3e-16
 Identities = 95/111 (85%), Gaps = 1/111 (0%)
 Strand = Plus / Minus

                                                                            
Query: 30       caggttgngcgatgttttgaagatgatgatattgttcacgtgaatggaaaagnctgatcc 89
                ||||||| |||||||||||||||||||||||||||||| |||| ||| ||||  ||||||
Sbjct: 32173250 caggttgtgcgatgttttgaagatgatgatattgttcatgtgagtgggaaagt-tgatcc 32173192

                                                                   
Query: 90       cangtcagatatngatgtgattaacttagaactcatattttgtgatcttga 140
                ||  |||||||| ||||| |||||  | || || ||||||| |||||||||
Sbjct: 32173191 caaatcagatattgatgtaattaatctggagcttatattttctgatcttga 32173141



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                      
Query: 142      cagatagagaagagattgnataagcttaaaaagagcaa 179
                ||||||||||| ||| || |||||||||||||||||||
Sbjct: 32173014 cagatagagaaaagactggataagcttaaaaagagcaa 32172977

>gb|AY111859.1| Zea mays CL35478_1 mRNA sequence
          Length = 509

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 76/89 (85%)
 Strand = Plus / Plus

                                                                       
Query: 247 gcacttatggatggaaagcctgcaagatctgttgatttgcctgaccntgagaaagaagct 306
           ||||||||||| ||||||||||||||||| || |||||  |||| | |||||||||||||
Sbjct: 196 gcacttatggaaggaaagcctgcaagatcggtcgatttagctgagcatgagaaagaagct 255

                                        
Query: 307 ntacnncatctttatctgctcactatgaa 335
            ||   || ||||||||||| ||||||||
Sbjct: 256 ataaaacacctttatctgctaactatgaa 284



 Score = 50.1 bits (25), Expect = 0.005
 Identities = 68/83 (81%)
 Strand = Plus / Plus

                                                                       
Query: 94  tcagatatngatgtgattaacttagaactcatattttgtgatcttgaacagatagagaag 153
           ||||| || ||||| |||||| |||| || |||||||  |||||||| ||||||||||| 
Sbjct: 43  tcagacattgatgtcattaacctagagctgatattttcagatcttgaccagatagagaac 102

                                  
Query: 154 agattgnataagcttaaaaagag 176
           ||  |  |||||||||| |||||
Sbjct: 103 aggctagataagcttaacaagag 125

>emb|CR522870.1| Desulfotalea psychrophila LSv54 chromosome
          Length = 3523383

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 45     tttgaagatgatgatattgttcacgt 70
              |||||||||||| |||||||||||||
Sbjct: 879795 tttgaagatgataatattgttcacgt 879820

>gb|AE017143.1| Haemophilus ducreyi strain 35000HP complete genome
          Length = 1698955

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 42     tgttttgaagatgatgatattgttcacgtg 71
              ||||||||| ||||||||||||| ||||||
Sbjct: 791188 tgttttgaaaatgatgatattgtgcacgtg 791159

>gb|BT012773.1| Lycopersicon esculentum clone 113752F, mRNA sequence
          Length = 1846

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 56/68 (82%)
 Strand = Plus / Plus

                                                                       
Query: 9   cgtgaagtggattctatactccaggttgngcgatgttttgaagatgatgatattgttcac 68
           ||||||||||| || ||||| ||||| |  || |||||||| ||  |||| |||||||| 
Sbjct: 631 cgtgaagtggactccatacttcaggtagtacgttgttttgaggacaatgacattgttcat 690

                   
Query: 69  gtgaatgg 76
           ||||||||
Sbjct: 691 gtgaatgg 698

>emb|AL355604.11| Human DNA sequence from clone RP11-404E6 on chromosome 9 Contains a
              pseudogene similar to part of dipeptidylpeptidase 3 (DPP3),
              complete sequence
          Length = 183010

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 120    actcatattttgtgatcttga 140
              |||||||||||||||||||||
Sbjct: 178845 actcatattttgtgatcttga 178825

>gb|AC102255.10| Mus musculus chromosome 18, clone RP24-182H11, complete sequence
          Length = 195275

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 28/29 (96%), Gaps = 1/29 (3%)
 Strand = Plus / Minus

                                          
Query: 127   ttttgtgatcttgaaca-gatagagaaga 154
             ||||||||||||||||| |||||||||||
Sbjct: 48240 ttttgtgatcttgaacacgatagagaaga 48212

>emb|AL845437.14| Zebrafish DNA sequence from clone DKEY-98J1 in linkage group 23, complete
              sequence
          Length = 239084

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 234    aaaaattctggatgcacttat 254
              |||||||||||||||||||||
Sbjct: 167010 aaaaattctggatgcacttat 167030

>gb|AE017197.1| Rickettsia typhi str. Wilmington complete genome
          Length = 1111496

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 42     tgttttgaagatgatgatat 61
              ||||||||||||||||||||
Sbjct: 770675 tgttttgaagatgatgatat 770656

>gb|AC073318.8| Homo sapiens BAC clone RP11-266F12 from 7, complete sequence
          Length = 162460

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 233    aaaaaattctggatgcactt 252
              ||||||||||||||||||||
Sbjct: 143529 aaaaaattctggatgcactt 143548

>gb|AE014075.1| Escherichia coli CFT073, complete genome
          Length = 5231428

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 45     tttgaagatgatgatattgt 64
              ||||||||||||||||||||
Sbjct: 793096 tttgaagatgatgatattgt 793077

>gb|CP000243.1| Escherichia coli UTI89, complete genome
          Length = 5065741

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 45     tttgaagatgatgatattgt 64
              ||||||||||||||||||||
Sbjct: 734169 tttgaagatgatgatattgt 734150

>gb|AC078921.17| Homo sapiens 12q BAC RP11-385F23 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 107641

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                         
Query: 144    gatagagaagagattgnataagcttaa 170
              ||||||||||| |||| ||||||||||
Sbjct: 100095 gatagagaagatattgtataagcttaa 100069

>gb|AC091979.5| Homo sapiens chromosome 5 clone RP11-542A14, complete sequence
          Length = 63946

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 273   atctgttgatttgcctgacc 292
             ||||||||||||||||||||
Sbjct: 37750 atctgttgatttgcctgacc 37731

>gb|AC016706.6| Homo sapiens BAC clone RP11-215D12 from 2, complete sequence
          Length = 184121

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 121   ctcatattttgtgatcttga 140
             ||||||||||||||||||||
Sbjct: 75998 ctcatattttgtgatcttga 76017


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,292,436
Number of Sequences: 3902068
Number of extensions: 2292436
Number of successful extensions: 41217
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 41110
Number of HSP's gapped (non-prelim): 106
length of query: 339
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 317
effective length of database: 17,147,199,772
effective search space: 5435662327724
effective search space used: 5435662327724
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)