ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags10o08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_478301.1| Oryza sativa (japonica cultivar-group), mRNA 511 e-142
2ref|XM_507365.1| PREDICTED Oryza sativa (japonica cultivar-group... 511 e-142
3ref|XM_506358.1| PREDICTED Oryza sativa (japonica cultivar-group... 511 e-142
4dbj|AK104035.1| Oryza sativa (japonica cultivar-group) cDNA clon... 511 e-142
5dbj|AK103102.1| Oryza sativa (japonica cultivar-group) cDNA clon... 511 e-142
6dbj|AK068687.1| Oryza sativa (japonica cultivar-group) cDNA clon... 511 e-142
7gb|AY596590.1| Saccharum officinarum clone SCJFLR1013H05, comple... 509 e-141
8gb|AY103628.1| Zea mays PCO109231 mRNA sequence 464 e-127
9dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 256 8e-65
10dbj|AP005127.5| Oryza sativa (japonica cultivar-group) genomic D... 256 8e-65
11gb|BT013402.1| Lycopersicon esculentum clone 135714R, mRNA sequence 86 2e-13
12ref|NM_118277.3| Arabidopsis thaliana unknown protein AT4G21570 ... 56 1e-04
13emb|AL161555.2|ATCHRIV55 Arabidopsis thaliana DNA chromosome 4, ... 56 1e-04
14emb|AL035527.1|ATF17L22 Arabidopsis thaliana DNA chromosome 4, B... 56 1e-04
15emb|AL022603.1|ATF18E5 Arabidopsis thaliana DNA chromosome 4, BA... 56 1e-04
16gb|AY114568.1| Arabidopsis thaliana putative protein (At4g21570)... 56 1e-04
17gb|AY092966.1| Arabidopsis thaliana putative protein (At4g21570)... 56 1e-04
18emb|BX828223.1|CNS0A3UK Arabidopsis thaliana Full-length cDNA Co... 56 1e-04
19emb|BX841534.1|CNS09YH3 Arabidopsis thaliana Full-length cDNA Co... 56 1e-04
20emb|AL137081.1|ATF9D24 Arabidopsis thaliana DNA chromosome 3, BA... 46 0.14
21gb|AC110510.6| Mus musculus chromosome 1, clone RP24-503F14, com... 44 0.54
22gb|AC102874.7| Mus musculus chromosome 1, clone RP24-500O1, comp... 44 0.54
23emb|BX005397.20| Zebrafish DNA sequence from clone CH211-270B18 ... 44 0.54
24ref|NM_100992.1| Arabidopsis thaliana unknown protein AT1G11200 ... 42 2.1
25gb|AY634311.1| Lycopersicon esculentum cell-wall invertase (Lin6... 42 2.1
26gb|AC144509.3| Mus musculus BAC clone RP23-394G5 from chromosome... 42 2.1
27emb|X75356.1|CBQPH1 C.burnetii QpH1 plasmid, complete genomic se... 42 2.1
28emb|AL844847.6| Zebrafish DNA sequence from clone DKEY-13A21 in ... 42 2.1
29gb|AE016829.1| Coxiella burnetii strain RSA 493 plasmid pQpH1, c... 42 2.1
30gb|AF506004.1| Lycopersicon esculentum cell-wall invertase (Lin8... 42 2.1
31gb|AY088077.1| Arabidopsis thaliana clone 40975 mRNA, complete s... 42 2.1
32emb|X85964.1|CBDNA9ORF C.burnetii ORF 611, ORF 206 & unknown ORF 42 2.1
33gb|AF131076.1|AF131076 Coxiella burnetii strain R1140 plasmid Qp... 42 2.1
34gb|BC074562.1| Xenopus tropicalis baculoviral IAP repeat-contain... 40 8.5
35gb|AC004748.1| Homo sapiens chromosome 5, BAC clone 7h13 (LBNL H... 40 8.5
36gb|AF077537.1| Caenorhabditis elegans cosmid F16G10, complete se... 40 8.5
37ref|XM_865722.1| PREDICTED: Bos taurus hypothetical protein LOC6... 40 8.5
38gb|AC121835.2| Mus musculus BAC clone RP24-72L18 from 8, complet... 40 8.5
39emb|BX248309.8| Human DNA sequence from clone DASS-241N2 on chro... 40 8.5
40emb|AL844527.6| Human DNA sequence from clone DAQB-314F24 on chr... 40 8.5
41emb|AL662824.9| Human DNA sequence from clone XXbac-22I16 on chr... 40 8.5
42emb|AL645940.4| Human DNA sequence from clone XXbac-157A10 on ch... 40 8.5
43emb|AL590672.14| Human DNA sequence from clone CTD-2609B1 on chr... 40 8.5
44emb|AL157780.12| Human DNA sequence from clone RP11-98E22 on chr... 40 8.5
45emb|AL031228.1|HS1033B10 Human DNA sequence from clone RP5-1033B... 40 8.5
46ref|NM_001005449.1| Xenopus tropicalis baculoviral IAP repeat-co... 40 8.5
47emb|CR936877.4| Human DNA sequence from clone DAMC-269O2 on chro... 40 8.5
48emb|CR354565.6| Human DNA sequence from clone DAMA-248N13 on chr... 40 8.5
49emb|CR759733.4| Human DNA sequence from clone DADB-100D22 on chr... 40 8.5
50gb|AC163712.3| Gallus gallus BAC clone CH261-29M9 from chromosom... 40 8.5
51gb|AC113376.2| Homo sapiens chromosome 5 clone RP11-262B5, compl... 40 8.5
52gb|AC092659.2| Homo sapiens BAC clone RP11-495I15 from 4, comple... 40 8.5
53ref|NM_067180.2| Caenorhabditis elegans Y75B8A.8 (Y75B8A.8) mRNA... 40 8.5
54gb|AC148711.1| Macaca mulatta Major Histocompatibility Complex B... 40 8.5
55gb|AC148707.1| Macaca mulatta Major Histocompatibility Complex B... 40 8.5
56gb|AC148674.1| Macaca mulatta Major Histocompatibility Complex B... 40 8.5
57emb|AL590328.2|CNS07EG5 Human chromosome 14 DNA sequence BAC R-8... 40 8.5
58gb|DQ324357.1| (Populus tomentosa x P. bolleana) x P. tomentosa ... 40 8.5
59emb|AL121839.3|CNS01DSQ Human chromosome 14 DNA sequence BAC R-7... 40 8.5
60gb|AC174642.2| Mus musculus BAC clone RP24-362N12 from chromosom... 40 8.5
61gb|U32169.1|HSU32169 Human pro-a2 chain of collagen type XI (COL... 40 8.5
62emb|AL033514.1|CEY75B8A Caenorhabditis elegans YAC Y75B8A, compl... 40 8.5
63gb|AC132240.3| Mus musculus BAC clone RP24-411A22 from 3, comple... 40 8.5
64gb|AC087229.27| Mus musculus strain C57BL/6J chromosome 1 clone ... 40 8.5
65dbj|AP004466.1| Lotus japonicus genomic DNA, chromosome 1, clone... 40 8.5
66emb|AL845263.10| Mouse DNA sequence from clone RP23-337L20 on ch... 40 8.5
67emb|AL807390.11| Mouse DNA sequence from clone RP23-223F2 on chr... 40 8.5

>ref|XM_478301.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1267

 Score =  511 bits (258), Expect = e-142
 Identities = 432/490 (88%)
 Strand = Plus / Plus

                                                                       
Query: 118 tgttcccagggatggaccttaccaaaatggaccctccaacacttaccctccttggagcag 177
           ||||||| |||||||| ||||| ||||||||  |||| || |||||||||||||||||||
Sbjct: 104 tgttccctgggatggatcttacgaaaatggatgctcctactcttaccctccttggagcag 163

                                                                       
Query: 178 cctgttgtgtaatgttatccatgcatttcacagtgcagttggtatcacaacatcttttct 237
           |||| ||||||||| |||| |||||||| ||||| |||||||| || || ||||||||||
Sbjct: 164 cctgctgtgtaatgctatcgatgcattttacagtacagttggtgtcgcagcatcttttct 223

                                                                       
Query: 238 attggaaaaatcccaaagagcagaaggctatactcatcattgtgctaatggctccactct 297
           ||||||| |||||||| ||||||||||||||||| || || || || ||||||||  | |
Sbjct: 224 attggaagaatcccaaggagcagaaggctatacttattatcgttctcatggctcccttat 283

                                                                       
Query: 298 atgctataacttcctttgttggccttctggatattaagggaagcaaaacgttttttacat 357
           ||||||||| |||||||||||| ||||||||||| |||||||||||||| ||||| || |
Sbjct: 284 atgctataaattcctttgttggtcttctggatatcaagggaagcaaaacatttttcactt 343

                                                                       
Query: 358 gcttggagtctgttaaaggatgctatgaggcactggttattgctaagtttctggcattga 417
            ||||||  |||| |||| |||||| |||||||||| ||||||||||||| ||||| |||
Sbjct: 344 tcttggatgctgtcaaagaatgctacgaggcactggctattgctaagtttatggcactga 403

                                                                       
Query: 418 tgtacagctacttgaatatatctattagcaaaaacattgtacctgatgaaatcaaaggga 477
           |||||||||| ||||||||||||||||| || ||||| || |||||||| ||||||||||
Sbjct: 404 tgtacagctatttgaatatatctattagtaagaacatagttcctgatgagatcaaaggga 463

                                                                       
Query: 478 gggctcttcatcattctttccctgtctctcttttcctgccccgcaatgttcggttggagc 537
           |||  ||||||||||| |||||||| || ||||||||||||||||||||||| |||||||
Sbjct: 464 gggtgcttcatcattccttccctgtttcccttttcctgccccgcaatgttcgattggagc 523

                                                                       
Query: 538 acaagacactaaagcttctgaagtactggacctggcaatttgttgttgttaggcctgtat 597
           | || ||||| ||||||||||||||||||||||||||||||||||||||||||||  |||
Sbjct: 524 ataaaacactgaagcttctgaagtactggacctggcaatttgttgttgttaggcccatat 583

                     
Query: 598 gctccattct 607
           || |||||||
Sbjct: 584 gcgccattct 593



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>ref|XM_507365.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBb0062D12.107
           mRNA
          Length = 1292

 Score =  511 bits (258), Expect = e-142
 Identities = 432/490 (88%)
 Strand = Plus / Plus

                                                                       
Query: 118 tgttcccagggatggaccttaccaaaatggaccctccaacacttaccctccttggagcag 177
           ||||||| |||||||| ||||| ||||||||  |||| || |||||||||||||||||||
Sbjct: 129 tgttccctgggatggatcttacgaaaatggatgctcctactcttaccctccttggagcag 188

                                                                       
Query: 178 cctgttgtgtaatgttatccatgcatttcacagtgcagttggtatcacaacatcttttct 237
           |||| ||||||||| |||| |||||||| ||||| |||||||| || || ||||||||||
Sbjct: 189 cctgctgtgtaatgctatcgatgcattttacagtacagttggtgtcgcagcatcttttct 248

                                                                       
Query: 238 attggaaaaatcccaaagagcagaaggctatactcatcattgtgctaatggctccactct 297
           ||||||| |||||||| ||||||||||||||||| || || || || ||||||||  | |
Sbjct: 249 attggaagaatcccaaggagcagaaggctatacttattatcgttctcatggctcccttat 308

                                                                       
Query: 298 atgctataacttcctttgttggccttctggatattaagggaagcaaaacgttttttacat 357
           ||||||||| |||||||||||| ||||||||||| |||||||||||||| ||||| || |
Sbjct: 309 atgctataaattcctttgttggtcttctggatatcaagggaagcaaaacatttttcactt 368

                                                                       
Query: 358 gcttggagtctgttaaaggatgctatgaggcactggttattgctaagtttctggcattga 417
            ||||||  |||| |||| |||||| |||||||||| ||||||||||||| ||||| |||
Sbjct: 369 tcttggatgctgtcaaagaatgctacgaggcactggctattgctaagtttatggcactga 428

                                                                       
Query: 418 tgtacagctacttgaatatatctattagcaaaaacattgtacctgatgaaatcaaaggga 477
           |||||||||| ||||||||||||||||| || ||||| || |||||||| ||||||||||
Sbjct: 429 tgtacagctatttgaatatatctattagtaagaacatagttcctgatgagatcaaaggga 488

                                                                       
Query: 478 gggctcttcatcattctttccctgtctctcttttcctgccccgcaatgttcggttggagc 537
           |||  ||||||||||| |||||||| || ||||||||||||||||||||||| |||||||
Sbjct: 489 gggtgcttcatcattccttccctgtttcccttttcctgccccgcaatgttcgattggagc 548

                                                                       
Query: 538 acaagacactaaagcttctgaagtactggacctggcaatttgttgttgttaggcctgtat 597
           | || ||||| ||||||||||||||||||||||||||||||||||||||||||||  |||
Sbjct: 549 ataaaacactgaagcttctgaagtactggacctggcaatttgttgttgttaggcccatat 608

                     
Query: 598 gctccattct 607
           || |||||||
Sbjct: 609 gcgccattct 618



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>ref|XM_506358.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBb0062D12.107
           mRNA
          Length = 1292

 Score =  511 bits (258), Expect = e-142
 Identities = 432/490 (88%)
 Strand = Plus / Plus

                                                                       
Query: 118 tgttcccagggatggaccttaccaaaatggaccctccaacacttaccctccttggagcag 177
           ||||||| |||||||| ||||| ||||||||  |||| || |||||||||||||||||||
Sbjct: 129 tgttccctgggatggatcttacgaaaatggatgctcctactcttaccctccttggagcag 188

                                                                       
Query: 178 cctgttgtgtaatgttatccatgcatttcacagtgcagttggtatcacaacatcttttct 237
           |||| ||||||||| |||| |||||||| ||||| |||||||| || || ||||||||||
Sbjct: 189 cctgctgtgtaatgctatcgatgcattttacagtacagttggtgtcgcagcatcttttct 248

                                                                       
Query: 238 attggaaaaatcccaaagagcagaaggctatactcatcattgtgctaatggctccactct 297
           ||||||| |||||||| ||||||||||||||||| || || || || ||||||||  | |
Sbjct: 249 attggaagaatcccaaggagcagaaggctatacttattatcgttctcatggctcccttat 308

                                                                       
Query: 298 atgctataacttcctttgttggccttctggatattaagggaagcaaaacgttttttacat 357
           ||||||||| |||||||||||| ||||||||||| |||||||||||||| ||||| || |
Sbjct: 309 atgctataaattcctttgttggtcttctggatatcaagggaagcaaaacatttttcactt 368

                                                                       
Query: 358 gcttggagtctgttaaaggatgctatgaggcactggttattgctaagtttctggcattga 417
            ||||||  |||| |||| |||||| |||||||||| ||||||||||||| ||||| |||
Sbjct: 369 tcttggatgctgtcaaagaatgctacgaggcactggctattgctaagtttatggcactga 428

                                                                       
Query: 418 tgtacagctacttgaatatatctattagcaaaaacattgtacctgatgaaatcaaaggga 477
           |||||||||| ||||||||||||||||| || ||||| || |||||||| ||||||||||
Sbjct: 429 tgtacagctatttgaatatatctattagtaagaacatagttcctgatgagatcaaaggga 488

                                                                       
Query: 478 gggctcttcatcattctttccctgtctctcttttcctgccccgcaatgttcggttggagc 537
           |||  ||||||||||| |||||||| || ||||||||||||||||||||||| |||||||
Sbjct: 489 gggtgcttcatcattccttccctgtttcccttttcctgccccgcaatgttcgattggagc 548

                                                                       
Query: 538 acaagacactaaagcttctgaagtactggacctggcaatttgttgttgttaggcctgtat 597
           | || ||||| ||||||||||||||||||||||||||||||||||||||||||||  |||
Sbjct: 549 ataaaacactgaagcttctgaagtactggacctggcaatttgttgttgttaggcccatat 608

                     
Query: 598 gctccattct 607
           || |||||||
Sbjct: 609 gcgccattct 618



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>dbj|AK104035.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-020-G11, full
           insert sequence
          Length = 1268

 Score =  511 bits (258), Expect = e-142
 Identities = 432/490 (88%)
 Strand = Plus / Plus

                                                                       
Query: 118 tgttcccagggatggaccttaccaaaatggaccctccaacacttaccctccttggagcag 177
           ||||||| |||||||| ||||| ||||||||  |||| || |||||||||||||||||||
Sbjct: 104 tgttccctgggatggatcttacgaaaatggatgctcctactcttaccctccttggagcag 163

                                                                       
Query: 178 cctgttgtgtaatgttatccatgcatttcacagtgcagttggtatcacaacatcttttct 237
           |||| ||||||||| |||| |||||||| ||||| |||||||| || || ||||||||||
Sbjct: 164 cctgctgtgtaatgctatcgatgcattttacagtacagttggtgtcgcagcatcttttct 223

                                                                       
Query: 238 attggaaaaatcccaaagagcagaaggctatactcatcattgtgctaatggctccactct 297
           ||||||| |||||||| ||||||||||||||||| || || || || ||||||||  | |
Sbjct: 224 attggaagaatcccaaggagcagaaggctatacttattatcgttctcatggctcccttat 283

                                                                       
Query: 298 atgctataacttcctttgttggccttctggatattaagggaagcaaaacgttttttacat 357
           ||||||||| |||||||||||| ||||||||||| |||||||||||||| ||||| || |
Sbjct: 284 atgctataaattcctttgttggtcttctggatatcaagggaagcaaaacatttttcactt 343

                                                                       
Query: 358 gcttggagtctgttaaaggatgctatgaggcactggttattgctaagtttctggcattga 417
            ||||||  |||| |||| |||||| |||||||||| ||||||||||||| ||||| |||
Sbjct: 344 tcttggatgctgtcaaagaatgctacgaggcactggctattgctaagtttatggcactga 403

                                                                       
Query: 418 tgtacagctacttgaatatatctattagcaaaaacattgtacctgatgaaatcaaaggga 477
           |||||||||| ||||||||||||||||| || ||||| || |||||||| ||||||||||
Sbjct: 404 tgtacagctatttgaatatatctattagtaagaacatagttcctgatgagatcaaaggga 463

                                                                       
Query: 478 gggctcttcatcattctttccctgtctctcttttcctgccccgcaatgttcggttggagc 537
           |||  ||||||||||| |||||||| || ||||||||||||||||||||||| |||||||
Sbjct: 464 gggtgcttcatcattccttccctgtttcccttttcctgccccgcaatgttcgattggagc 523

                                                                       
Query: 538 acaagacactaaagcttctgaagtactggacctggcaatttgttgttgttaggcctgtat 597
           | || ||||| ||||||||||||||||||||||||||||||||||||||||||||  |||
Sbjct: 524 ataaaacactgaagcttctgaagtactggacctggcaatttgttgttgttaggcccatat 583

                     
Query: 598 gctccattct 607
           || |||||||
Sbjct: 584 gcgccattct 593



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>dbj|AK103102.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033118N22, full
           insert sequence
          Length = 1292

 Score =  511 bits (258), Expect = e-142
 Identities = 432/490 (88%)
 Strand = Plus / Plus

                                                                       
Query: 118 tgttcccagggatggaccttaccaaaatggaccctccaacacttaccctccttggagcag 177
           ||||||| |||||||| ||||| ||||||||  |||| || |||||||||||||||||||
Sbjct: 129 tgttccctgggatggatcttacgaaaatggatgctcctactcttaccctccttggagcag 188

                                                                       
Query: 178 cctgttgtgtaatgttatccatgcatttcacagtgcagttggtatcacaacatcttttct 237
           |||| ||||||||| |||| |||||||| ||||| |||||||| || || ||||||||||
Sbjct: 189 cctgctgtgtaatgctatcgatgcattttacagtacagttggtgtcgcagcatcttttct 248

                                                                       
Query: 238 attggaaaaatcccaaagagcagaaggctatactcatcattgtgctaatggctccactct 297
           ||||||| |||||||| ||||||||||||||||| || || || || ||||||||  | |
Sbjct: 249 attggaagaatcccaaggagcagaaggctatacttattatcgttctcatggctcccttat 308

                                                                       
Query: 298 atgctataacttcctttgttggccttctggatattaagggaagcaaaacgttttttacat 357
           ||||||||| |||||||||||| ||||||||||| |||||||||||||| ||||| || |
Sbjct: 309 atgctataaattcctttgttggtcttctggatatcaagggaagcaaaacatttttcactt 368

                                                                       
Query: 358 gcttggagtctgttaaaggatgctatgaggcactggttattgctaagtttctggcattga 417
            ||||||  |||| |||| |||||| |||||||||| ||||||||||||| ||||| |||
Sbjct: 369 tcttggatgctgtcaaagaatgctacgaggcactggctattgctaagtttatggcactga 428

                                                                       
Query: 418 tgtacagctacttgaatatatctattagcaaaaacattgtacctgatgaaatcaaaggga 477
           |||||||||| ||||||||||||||||| || ||||| || |||||||| ||||||||||
Sbjct: 429 tgtacagctatttgaatatatctattagtaagaacatagttcctgatgagatcaaaggga 488

                                                                       
Query: 478 gggctcttcatcattctttccctgtctctcttttcctgccccgcaatgttcggttggagc 537
           |||  ||||||||||| |||||||| || ||||||||||||||||||||||| |||||||
Sbjct: 489 gggtgcttcatcattccttccctgtttcccttttcctgccccgcaatgttcgattggagc 548

                                                                       
Query: 538 acaagacactaaagcttctgaagtactggacctggcaatttgttgttgttaggcctgtat 597
           | || ||||| ||||||||||||||||||||||||||||||||||||||||||||  |||
Sbjct: 549 ataaaacactgaagcttctgaagtactggacctggcaatttgttgttgttaggcccatat 608

                     
Query: 598 gctccattct 607
           || |||||||
Sbjct: 609 gcgccattct 618



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>dbj|AK068687.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013160E09, full
           insert sequence
          Length = 1292

 Score =  511 bits (258), Expect = e-142
 Identities = 432/490 (88%)
 Strand = Plus / Plus

                                                                       
Query: 118 tgttcccagggatggaccttaccaaaatggaccctccaacacttaccctccttggagcag 177
           ||||||| |||||||| ||||| ||||||||  |||| || |||||||||||||||||||
Sbjct: 129 tgttccctgggatggatcttacgaaaatggatgctcctactcttaccctccttggagcag 188

                                                                       
Query: 178 cctgttgtgtaatgttatccatgcatttcacagtgcagttggtatcacaacatcttttct 237
           |||| ||||||||| |||| |||||||| ||||| |||||||| || || ||||||||||
Sbjct: 189 cctgctgtgtaatgctatcgatgcattttacagtacagttggtgtcgcagcatcttttct 248

                                                                       
Query: 238 attggaaaaatcccaaagagcagaaggctatactcatcattgtgctaatggctccactct 297
           ||||||| |||||||| ||||||||||||||||| || || || || ||||||||  | |
Sbjct: 249 attggaagaatcccaaggagcagaaggctatacttattatcgttctcatggctcccttat 308

                                                                       
Query: 298 atgctataacttcctttgttggccttctggatattaagggaagcaaaacgttttttacat 357
           ||||||||| |||||||||||| ||||||||||| |||||||||||||| ||||| || |
Sbjct: 309 atgctataaattcctttgttggtcttctggatatcaagggaagcaaaacatttttcactt 368

                                                                       
Query: 358 gcttggagtctgttaaaggatgctatgaggcactggttattgctaagtttctggcattga 417
            ||||||  |||| |||| |||||| |||||||||| ||||||||||||| ||||| |||
Sbjct: 369 tcttggatgctgtcaaagaatgctacgaggcactggctattgctaagtttatggcactga 428

                                                                       
Query: 418 tgtacagctacttgaatatatctattagcaaaaacattgtacctgatgaaatcaaaggga 477
           |||||||||| ||||||||||||||||| || ||||| || |||||||| ||||||||||
Sbjct: 429 tgtacagctatttgaatatatctattagtaagaacatagttcctgatgagatcaaaggga 488

                                                                       
Query: 478 gggctcttcatcattctttccctgtctctcttttcctgccccgcaatgttcggttggagc 537
           |||  ||||||||||| |||||||| || ||||||||||||||||||||||| |||||||
Sbjct: 489 gggtgcttcatcattccttccctgtttcccttttcctgccccgcaatgttcgattggagc 548

                                                                       
Query: 538 acaagacactaaagcttctgaagtactggacctggcaatttgttgttgttaggcctgtat 597
           | || ||||| ||||||||||||||||||||||||||||||||||||||||||||  |||
Sbjct: 549 ataaaacactgaagcttctgaagtactggacctggcaatttgttgttgttaggcccatat 608

                     
Query: 598 gctccattct 607
           || |||||||
Sbjct: 609 gcgccattct 618



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>gb|AY596590.1| Saccharum officinarum clone SCJFLR1013H05, complete sequence
          Length = 1413

 Score =  509 bits (257), Expect = e-141
 Identities = 425/481 (88%)
 Strand = Plus / Minus

                                                                        
Query: 141  aaaatggaccctccaacacttaccctccttggagcagcctgttgtgtaatgttatccatg 200
            |||||||| ||  |||| || ||||||||||| |||||  ||||||||||| |  | |||
Sbjct: 1223 aaaatggatcccgcaactctgaccctccttggggcagctggttgtgtaatgctgactatg 1164

                                                                        
Query: 201  catttcacagtgcagttggtatcacaacatcttttctattggaaaaatcccaaagagcag 260
            |||||||| ||||| ||||| ||||||||||| |||||||||||||| ||||| ||||||
Sbjct: 1163 catttcactgtgcaattggtgtcacaacatctcttctattggaaaaaccccaaggagcag 1104

                                                                        
Query: 261  aaggctatactcatcattgtgctaatggctccactctatgctataacttcctttgttggc 320
            || |||||||| || |||||||||||||||||||| ||||||||  ||||||| || || 
Sbjct: 1103 aaagctatacttattattgtgctaatggctccactatatgctatctcttccttcgtgggt 1044

                                                                        
Query: 321  cttctggatattaagggaagcaaaacgttttttacatgcttggagtctgttaaaggatgc 380
            ||||| |||||  |||| ||||| || ||||| |||| ||||||  ||||||||| ||||
Sbjct: 1043 cttcttgatatccagggtagcaagacatttttcacattcttggatgctgttaaagaatgc 984

                                                                        
Query: 381  tatgaggcactggttattgctaagtttctggcattgatgtacagctacttgaatatatct 440
            |||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| 
Sbjct: 983  tatgaggcactggtgattgctaagtttatggcattgatgtacagctacttgaatatatcc 924

                                                                        
Query: 441  attagcaaaaacattgtacctgatgaaatcaaagggagggctcttcatcattctttccct 500
            || ||||| ||||| || ||||||||||||||||||||||  ||||||||||| ||||||
Sbjct: 923  atcagcaagaacatagtccctgatgaaatcaaagggagggagcttcatcattccttccct 864

                                                                        
Query: 501  gtctctcttttcctgccccgcaatgttcggttggagcacaagacactaaagcttctgaag 560
            || ||||||||||||||||||||||| || ||||||||||||||| ||||||||||||||
Sbjct: 863  gtttctcttttcctgccccgcaatgtccgattggagcacaagacattaaagcttctgaag 804

                                                                        
Query: 561  tactggacctggcaatttgttgttgttaggcctgtatgctccattctgattatcgcactt 620
            || ||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||
Sbjct: 803  tattggacctggcaatttgttgttgttaggccagtatgttccattctgattattgcactt 744

             
Query: 621  c 621
            |
Sbjct: 743  c 743



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>gb|AY103628.1| Zea mays PCO109231 mRNA sequence
          Length = 1907

 Score =  464 bits (234), Expect = e-127
 Identities = 402/458 (87%)
 Strand = Plus / Plus

                                                                       
Query: 162 accctccttggagcagcctgttgtgtaatgttatccatgcatttcacagtgcagttggta 221
           ||||||||||| |||||  ||||||||||| |  | ||||||||||| ||||| ||||| 
Sbjct: 250 accctccttggggcagctggttgtgtaatgctgactatgcatttcactgtgcaattggtg 309

                                                                       
Query: 222 tcacaacatcttttctattggaaaaatcccaaagagcagaaggctatactcatcattgtg 281
           ||||||||||| |||||||||||||| ||||| |||||||| || ||||| || ||||||
Sbjct: 310 tcacaacatctcttctattggaaaaaccccaaggagcagaaagccatacttattattgtg 369

                                                                       
Query: 282 ctaatggctccactctatgctataacttcctttgttggccttctggatattaagggaagc 341
           || ||||||||||| || |||||  ||||||| || || ||||| |||||  |||| |||
Sbjct: 370 ctgatggctccactatacgctatctcttccttcgtgggtcttcttgatatccagggtagc 429

                                                                       
Query: 342 aaaacgttttttacatgcttggagtctgttaaaggatgctatgaggcactggttattgct 401
           || || ||||| |||| ||| ||  ||||||||| |||||||||||||||||| ||||||
Sbjct: 430 aagacatttttcacattcttagatgctgttaaagaatgctatgaggcactggtgattgct 489

                                                                       
Query: 402 aagtttctggcattgatgtacagctacttgaatatatctattagcaaaaacattgtacct 461
           |||||| |||||||||||||||||||||||||||||||||| ||||| ||||| || |||
Sbjct: 490 aagtttatggcattgatgtacagctacttgaatatatctatcagcaagaacatagtccct 549

                                                                       
Query: 462 gatgaaatcaaagggagggctcttcatcattctttccctgtctctcttttcctgccccgc 521
           |||||||||||||||||||  ||||||||||| |||||||| ||||||||||||||||||
Sbjct: 550 gatgaaatcaaagggagggtgcttcatcattccttccctgtttctcttttcctgccccgc 609

                                                                       
Query: 522 aatgttcggttggagcacaagacactaaagcttctgaagtactggacctggcaatttgtt 581
           ||||| || ||||||||||||||| | |||||||||||||| ||||||||||||||||||
Sbjct: 610 aatgtccgattggagcacaagacattgaagcttctgaagtattggacctggcaatttgtt 669

                                                 
Query: 582 gttgttaggcctgtatgctccattctgattatcgcact 619
            |||||||||| ||||| |||||||||||||| |||||
Sbjct: 670 attgttaggccagtatgttccattctgattattgcact 707



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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  256 bits (129), Expect = 8e-65
 Identities = 240/277 (86%)
 Strand = Plus / Minus

                                                                            
Query: 118      tgttcccagggatggaccttaccaaaatggaccctccaacacttaccctccttggagcag 177
                ||||||| |||||||| ||||| ||||||||  |||| || |||||||||||||||||||
Sbjct: 19110293 tgttccctgggatggatcttacgaaaatggatgctcctactcttaccctccttggagcag 19110234

                                                                            
Query: 178      cctgttgtgtaatgttatccatgcatttcacagtgcagttggtatcacaacatcttttct 237
                |||| ||||||||| |||| |||||||| ||||| |||||||| || || ||||||||||
Sbjct: 19110233 cctgctgtgtaatgctatcgatgcattttacagtacagttggtgtcgcagcatcttttct 19110174

                                                                            
Query: 238      attggaaaaatcccaaagagcagaaggctatactcatcattgtgctaatggctccactct 297
                ||||||| |||||||| ||||||||||||||||| || || || || ||||||||  | |
Sbjct: 19110173 attggaagaatcccaaggagcagaaggctatacttattatcgttctcatggctcccttat 19110114

                                                                            
Query: 298      atgctataacttcctttgttggccttctggatattaagggaagcaaaacgttttttacat 357
                ||||||||| |||||||||||| ||||||||||| |||||||||||||| ||||| || |
Sbjct: 19110113 atgctataaattcctttgttggtcttctggatatcaagggaagcaaaacatttttcactt 19110054

                                                     
Query: 358      gcttggagtctgttaaaggatgctatgaggcactggt 394
                 ||||||  |||| |||| |||||| |||||||||||
Sbjct: 19110053 tcttggatgctgtcaaagaatgctacgaggcactggt 19110017



 Score =  137 bits (69), Expect = 5e-29
 Identities = 108/121 (89%)
 Strand = Plus / Minus

                                                                            
Query: 395      tattgctaagtttctggcattgatgtacagctacttgaatatatctattagcaaaaacat 454
                ||||||||||||| ||||| ||||||||||||| ||||||||||||||||| || |||||
Sbjct: 19109937 tattgctaagtttatggcactgatgtacagctatttgaatatatctattagtaagaacat 19109878

                                                                            
Query: 455      tgtacctgatgaaatcaaagggagggctcttcatcattctttccctgtctctcttttcct 514
                 || |||||||| |||||||||||||  ||||||||||| |||||||| || ||||||||
Sbjct: 19109877 agttcctgatgagatcaaagggagggtgcttcatcattccttccctgtttcccttttcct 19109818

                 
Query: 515      g 515
                |
Sbjct: 19109817 g 19109817



 Score =  129 bits (65), Expect = 1e-26
 Identities = 86/93 (92%)
 Strand = Plus / Minus

                                                                            
Query: 515      gccccgcaatgttcggttggagcacaagacactaaagcttctgaagtactggacctggca 574
                ||||||||||||||| |||||||| || ||||| ||||||||||||||||||||||||||
Sbjct: 19109148 gccccgcaatgttcgattggagcataaaacactgaagcttctgaagtactggacctggca 19109089

                                                 
Query: 575      atttgttgttgttaggcctgtatgctccattct 607
                ||||||||||||||||||  ||||| |||||||
Sbjct: 19109088 atttgttgttgttaggcccatatgcgccattct 19109056



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>dbj|AP005127.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBb0062D12
          Length = 155408

 Score =  256 bits (129), Expect = 8e-65
 Identities = 240/277 (86%)
 Strand = Plus / Minus

                                                                         
Query: 118   tgttcccagggatggaccttaccaaaatggaccctccaacacttaccctccttggagcag 177
             ||||||| |||||||| ||||| ||||||||  |||| || |||||||||||||||||||
Sbjct: 33688 tgttccctgggatggatcttacgaaaatggatgctcctactcttaccctccttggagcag 33629

                                                                         
Query: 178   cctgttgtgtaatgttatccatgcatttcacagtgcagttggtatcacaacatcttttct 237
             |||| ||||||||| |||| |||||||| ||||| |||||||| || || ||||||||||
Sbjct: 33628 cctgctgtgtaatgctatcgatgcattttacagtacagttggtgtcgcagcatcttttct 33569

                                                                         
Query: 238   attggaaaaatcccaaagagcagaaggctatactcatcattgtgctaatggctccactct 297
             ||||||| |||||||| ||||||||||||||||| || || || || ||||||||  | |
Sbjct: 33568 attggaagaatcccaaggagcagaaggctatacttattatcgttctcatggctcccttat 33509

                                                                         
Query: 298   atgctataacttcctttgttggccttctggatattaagggaagcaaaacgttttttacat 357
             ||||||||| |||||||||||| ||||||||||| |||||||||||||| ||||| || |
Sbjct: 33508 atgctataaattcctttgttggtcttctggatatcaagggaagcaaaacatttttcactt 33449

                                                  
Query: 358   gcttggagtctgttaaaggatgctatgaggcactggt 394
              ||||||  |||| |||| |||||| |||||||||||
Sbjct: 33448 tcttggatgctgtcaaagaatgctacgaggcactggt 33412



 Score =  137 bits (69), Expect = 5e-29
 Identities = 108/121 (89%)
 Strand = Plus / Minus

                                                                         
Query: 395   tattgctaagtttctggcattgatgtacagctacttgaatatatctattagcaaaaacat 454
             ||||||||||||| ||||| ||||||||||||| ||||||||||||||||| || |||||
Sbjct: 33332 tattgctaagtttatggcactgatgtacagctatttgaatatatctattagtaagaacat 33273

                                                                         
Query: 455   tgtacctgatgaaatcaaagggagggctcttcatcattctttccctgtctctcttttcct 514
              || |||||||| |||||||||||||  ||||||||||| |||||||| || ||||||||
Sbjct: 33272 agttcctgatgagatcaaagggagggtgcttcatcattccttccctgtttcccttttcct 33213

              
Query: 515   g 515
             |
Sbjct: 33212 g 33212



 Score =  129 bits (65), Expect = 1e-26
 Identities = 86/93 (92%)
 Strand = Plus / Minus

                                                                         
Query: 515   gccccgcaatgttcggttggagcacaagacactaaagcttctgaagtactggacctggca 574
             ||||||||||||||| |||||||| || ||||| ||||||||||||||||||||||||||
Sbjct: 32543 gccccgcaatgttcgattggagcataaaacactgaagcttctgaagtactggacctggca 32484

                                              
Query: 575   atttgttgttgttaggcctgtatgctccattct 607
             ||||||||||||||||||  ||||| |||||||
Sbjct: 32483 atttgttgttgttaggcccatatgcgccattct 32451



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>gb|BT013402.1| Lycopersicon esculentum clone 135714R, mRNA sequence
          Length = 1163

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 112/135 (82%)
 Strand = Plus / Plus

                                                                       
Query: 335 gggaagcaaaacgttttttacatgcttggagtctgttaaaggatgctatgaggcactggt 394
           |||||||||| | ||||| || | |||||| ||||| |||| ||| ||||| ||| | ||
Sbjct: 260 gggaagcaaaccctttttcactttcttggaatctgtcaaagaatgttatgaagcaattgt 319

                                                                       
Query: 395 tattgctaagtttctggcattgatgtacagctacttgaatatatctattagcaaaaacat 454
            || |||||||| ||||  ||||||||||  |||||||||||||| || |||||||||||
Sbjct: 320 gatggctaagttcctggggttgatgtacacttacttgaatatatccataagcaaaaacat 379

                          
Query: 455 tgtacctgatgaaat 469
            || |||||||||||
Sbjct: 380 agtccctgatgaaat 394



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                
Query: 549 aagcttctgaagtactggacctggcaatttgttgttgttaggcctgtatgctc 601
           |||||||| ||| ||||||| ||||| ||||||||  || | |||||||||||
Sbjct: 474 aagcttctcaagaactggacatggcagtttgttgtgattcgccctgtatgctc 526



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>ref|NM_118277.3| Arabidopsis thaliana unknown protein AT4G21570 mRNA, complete cds
          Length = 1286

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                           
Query: 261 aaggctatactcatcattgtgctaatggctcc 292
           ||||||||||||||||||||||| ||||||||
Sbjct: 300 aaggctatactcatcattgtgcttatggctcc 331



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 57/67 (85%)
 Strand = Plus / Plus

                                                                       
Query: 409 tggcattgatgtacagctacttgaatatatctattagcaaaaacattgtacctgatgaaa 468
           ||||||||||||| || ||  | || |||||||| |||||||||||| | ||||||| ||
Sbjct: 448 tggcattgatgtatagttatctaaacatatctatgagcaaaaacattttgcctgatggaa 507

                  
Query: 469 tcaaagg 475
           |||||||
Sbjct: 508 tcaaagg 514



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>emb|AL161555.2|ATCHRIV55 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 55
          Length = 194916

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                             
Query: 261   aaggctatactcatcattgtgctaatggctcc 292
             ||||||||||||||||||||||| ||||||||
Sbjct: 90000 aaggctatactcatcattgtgcttatggctcc 89969



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 57/67 (85%)
 Strand = Plus / Minus

                                                                         
Query: 409   tggcattgatgtacagctacttgaatatatctattagcaaaaacattgtacctgatgaaa 468
             ||||||||||||| || ||  | || |||||||| |||||||||||| | ||||||| ||
Sbjct: 89769 tggcattgatgtatagttatctaaacatatctatgagcaaaaacattttgcctgatggaa 89710

                    
Query: 469   tcaaagg 475
             |||||||
Sbjct: 89709 tcaaagg 89703



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>emb|AL035527.1|ATF17L22 Arabidopsis thaliana DNA chromosome 4, BAC clone F17L22 (ESSAII
            project)
          Length = 107702

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                            
Query: 261  aaggctatactcatcattgtgctaatggctcc 292
            ||||||||||||||||||||||| ||||||||
Sbjct: 3943 aaggctatactcatcattgtgcttatggctcc 3912



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 57/67 (85%)
 Strand = Plus / Minus

                                                                        
Query: 409  tggcattgatgtacagctacttgaatatatctattagcaaaaacattgtacctgatgaaa 468
            ||||||||||||| || ||  | || |||||||| |||||||||||| | ||||||| ||
Sbjct: 3712 tggcattgatgtatagttatctaaacatatctatgagcaaaaacattttgcctgatggaa 3653

                   
Query: 469  tcaaagg 475
            |||||||
Sbjct: 3652 tcaaagg 3646



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>emb|AL022603.1|ATF18E5 Arabidopsis thaliana DNA chromosome 4, BAC clone F18E5 (ESSAII project)
          Length = 95266

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                             
Query: 261   aaggctatactcatcattgtgctaatggctcc 292
             ||||||||||||||||||||||| ||||||||
Sbjct: 76992 aaggctatactcatcattgtgcttatggctcc 76961



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 57/67 (85%)
 Strand = Plus / Minus

                                                                         
Query: 409   tggcattgatgtacagctacttgaatatatctattagcaaaaacattgtacctgatgaaa 468
             ||||||||||||| || ||  | || |||||||| |||||||||||| | ||||||| ||
Sbjct: 76761 tggcattgatgtatagttatctaaacatatctatgagcaaaaacattttgcctgatggaa 76702

                    
Query: 469   tcaaagg 475
             |||||||
Sbjct: 76701 tcaaagg 76695



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>gb|AY114568.1| Arabidopsis thaliana putative protein (At4g21570) mRNA, complete
           cds
          Length = 916

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                           
Query: 261 aaggctatactcatcattgtgctaatggctcc 292
           ||||||||||||||||||||||| ||||||||
Sbjct: 136 aaggctatactcatcattgtgcttatggctcc 167



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 57/67 (85%)
 Strand = Plus / Plus

                                                                       
Query: 409 tggcattgatgtacagctacttgaatatatctattagcaaaaacattgtacctgatgaaa 468
           ||||||||||||| || ||  | || |||||||| |||||||||||| | ||||||| ||
Sbjct: 284 tggcattgatgtatagttatctaaacatatctatgagcaaaaacattttgcctgatggaa 343

                  
Query: 469 tcaaagg 475
           |||||||
Sbjct: 344 tcaaagg 350



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>gb|AY092966.1| Arabidopsis thaliana putative protein (At4g21570) mRNA, complete
           cds
          Length = 1220

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                           
Query: 261 aaggctatactcatcattgtgctaatggctcc 292
           ||||||||||||||||||||||| ||||||||
Sbjct: 300 aaggctatactcatcattgtgcttatggctcc 331



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 57/67 (85%)
 Strand = Plus / Plus

                                                                       
Query: 409 tggcattgatgtacagctacttgaatatatctattagcaaaaacattgtacctgatgaaa 468
           ||||||||||||| || ||  | || |||||||| |||||||||||| | ||||||| ||
Sbjct: 448 tggcattgatgtatagttatctaaacatatctatgagcaaaaacattttgcctgatggaa 507

                  
Query: 469 tcaaagg 475
           |||||||
Sbjct: 508 tcaaagg 514



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>emb|BX828223.1|CNS0A3UK Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH65ZC03 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1327

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                           
Query: 261 aaggctatactcatcattgtgctaatggctcc 292
           ||||||||||||||||||||||| ||||||||
Sbjct: 388 aaggctatactcatcattgtgcttatggctcc 419



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 57/67 (85%)
 Strand = Plus / Plus

                                                                       
Query: 409 tggcattgatgtacagctacttgaatatatctattagcaaaaacattgtacctgatgaaa 468
           ||||||||||||| || ||  | || |||||||| |||||||||||| | ||||||| ||
Sbjct: 536 tggcattgatgtatagttatctaaacatatctatgagcaaaaacattttgcctgatggaa 595

                  
Query: 469 tcaaagg 475
           |||||||
Sbjct: 596 tcaaagg 602



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>emb|BX841534.1|CNS09YH3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS42ZB06 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1133

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                           
Query: 261 aaggctatactcatcattgtgctaatggctcc 292
           ||||||||||||||||||||||| ||||||||
Sbjct: 269 aaggctatactcatcattgtgcttatggctcc 300



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 56/67 (83%)
 Strand = Plus / Plus

                                                                       
Query: 409 tggcattgatgtacagctacttgaatatatctattagcaaaaacattgtacctgatgaaa 468
           ||||||||||||| || ||  | || |||||||| ||||||| |||| | ||||||| ||
Sbjct: 418 tggcattgatgtatagttatctaaacatatctatgagcaaaagcattttgcctgatggaa 477

                  
Query: 469 tcaaagg 475
           |||||||
Sbjct: 478 tcaaagg 484



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>emb|AL137081.1|ATF9D24 Arabidopsis thaliana DNA chromosome 3, BAC clone F9D24
          Length = 105306

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 432   aatatatctattagcaaaaacat 454
             |||||||||||||||||||||||
Sbjct: 26979 aatatatctattagcaaaaacat 26957



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>gb|AC110510.6| Mus musculus chromosome 1, clone RP24-503F14, complete sequence
          Length = 198372

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 63    ctggccctcttccttccctccc 84
             ||||||||||||||||||||||
Sbjct: 64970 ctggccctcttccttccctccc 64949



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>gb|AC102874.7| Mus musculus chromosome 1, clone RP24-500O1, complete sequence
          Length = 166507

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 63     ctggccctcttccttccctccc 84
              ||||||||||||||||||||||
Sbjct: 151030 ctggccctcttccttccctccc 151009



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>emb|BX005397.20| Zebrafish DNA sequence from clone CH211-270B18 in linkage group 21,
             complete sequence
          Length = 157225

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 497   ccctgtctctcttttcctgccc 518
             ||||||||||||||||||||||
Sbjct: 97853 ccctgtctctcttttcctgccc 97874



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>ref|NM_100992.1| Arabidopsis thaliana unknown protein AT1G11200 mRNA, complete cds
          Length = 1150

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                        
Query: 377 atgctatgaggcactggttattgctaagtttctggcattgatgta 421
           ||||||||||||||| || |||||||| ||  |||| ||||||||
Sbjct: 335 atgctatgaggcacttgtcattgctaaattcttggctttgatgta 379



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>gb|AY634311.1| Lycopersicon esculentum cell-wall invertase (Lin6) gene, partial cds
          Length = 7064

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 223  cacaacatcttttctattggaaaaa 247
            |||||| ||||||||||||||||||
Sbjct: 6170 cacaacctcttttctattggaaaaa 6146



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>gb|AC144509.3| Mus musculus BAC clone RP23-394G5 from chromosome 5, complete sequence
          Length = 181316

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 491    ttctttccctgtctctcttttcctg 515
              |||||||| ||||||||||||||||
Sbjct: 116232 ttctttccttgtctctcttttcctg 116256



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>emb|X75356.1|CBQPH1 C.burnetii QpH1 plasmid, complete genomic sequence
          Length = 37329

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 430  tgaatatatctattagcaaaa 450
            |||||||||||||||||||||
Sbjct: 6562 tgaatatatctattagcaaaa 6542



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>emb|AL844847.6| Zebrafish DNA sequence from clone DKEY-13A21 in linkage group 11 Contains
              three novel genes, the opn1lw1 gene for opsin 1 (cone
              pigments), long-wave-sensitive, 1, a gene for novel protein
              similar to human and rodent member RAS oncogene family RAB7
              (RAB7), a gene for novel protein remotely similar to human
              host cell factor 1 (VP16-accessory protein) (HCFC1), the
              opn1sw2 gene for opsin 1 (cone pigments),
              short-wave-sensitive 1, a gene for novel protein similar to
              human and mouse CpG binding protein (CGBP), a gene for
              novel protein similar to vertebrate
              microphthalmia-associated transcription factor (MITF) and
              zebrafish transcription factor binding to IGHM enhancer 3a
              (tfe3a), a gene for novel protein similar to human and
              rodent catechol-O-methyltransferase (COMT), the flj10613l
              gene for hypothetical protein FLJ10613-like (H. sapiens), a
              gene for novel protein similar to human and mouse
              methyl-CpG binding domain protein 1 (MBD1), a gene for
              novel protein similar to zebrafish red-sensitive opsin
              (rdops), a gene for novel protein similar to mouse and
              human host cell factor C1 (VP16-accessory protein) (HCFC1),
              a gene for novel protein similar to human and rodent
              metabotropic glutamate receptors (GRM) and two CpG islands,
              complete sequence
          Length = 235174

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 241    ggaaaaatcccaaagagcaga 261
              |||||||||||||||||||||
Sbjct: 137653 ggaaaaatcccaaagagcaga 137633



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>gb|AE016829.1| Coxiella burnetii strain RSA 493 plasmid pQpH1, complete sequence
          Length = 37393

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 430   tgaatatatctattagcaaaa 450
             |||||||||||||||||||||
Sbjct: 29739 tgaatatatctattagcaaaa 29759



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>gb|AF506004.1| Lycopersicon esculentum cell-wall invertase (Lin8) and cell-wall
             invertase (Lin6) genes, complete cds
          Length = 23094

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 223   cacaacatcttttctattggaaaaa 247
             |||||| ||||||||||||||||||
Sbjct: 14835 cacaacctcttttctattggaaaaa 14811



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>gb|AY088077.1| Arabidopsis thaliana clone 40975 mRNA, complete sequence
          Length = 1149

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                        
Query: 377 atgctatgaggcactggttattgctaagtttctggcattgatgta 421
           ||||||||||||||| || |||||||| ||  |||| ||||||||
Sbjct: 335 atgctatgaggcacttgtcattgctaaattcttggctttgatgta 379



to top

>emb|X85964.1|CBDNA9ORF C.burnetii ORF 611, ORF 206 & unknown ORF
          Length = 7465

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 430  tgaatatatctattagcaaaa 450
            |||||||||||||||||||||
Sbjct: 2255 tgaatatatctattagcaaaa 2235



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>gb|AF131076.1|AF131076 Coxiella burnetii strain R1140 plasmid QpDV, complete sequence
          Length = 32601

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 430  tgaatatatctattagcaaaa 450
            |||||||||||||||||||||
Sbjct: 6564 tgaatatatctattagcaaaa 6544



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>gb|BC074562.1| Xenopus tropicalis baculoviral IAP repeat-containing 2, mRNA (cDNA
           clone MGC:69222 IMAGE:5307662), complete cds
          Length = 2159

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 62  gctggccctcttccttccct 81
           ||||||||||||||||||||
Sbjct: 149 gctggccctcttccttccct 168



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>gb|AC004748.1| Homo sapiens chromosome 5, BAC clone 7h13 (LBNL H100), complete
             sequence
          Length = 110804

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 568   cctggcaatttgttgttgtt 587
             ||||||||||||||||||||
Sbjct: 56479 cctggcaatttgttgttgtt 56460



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>gb|AF077537.1| Caenorhabditis elegans cosmid F16G10, complete sequence
          Length = 41718

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 4     agactcgccaaatttgctgcagatctct 31
             |||||||||||||||| ||| |||||||
Sbjct: 32879 agactcgccaaatttgttgctgatctct 32852



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>ref|XM_865722.1| PREDICTED: Bos taurus hypothetical protein LOC614279 (LOC614279),
            mRNA
          Length = 2106

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 173  agcagcctgttgtgtaatgt 192
            ||||||||||||||||||||
Sbjct: 1433 agcagcctgttgtgtaatgt 1452



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>gb|AC121835.2| Mus musculus BAC clone RP24-72L18 from 8, complete sequence
          Length = 225065

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 226   aacatcttttctattggaaaaatc 249
             |||||||||| |||||||||||||
Sbjct: 39592 aacatcttttgtattggaaaaatc 39569



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>emb|BX248309.8| Human DNA sequence from clone DASS-241N2 on chromosome 6, complete
             sequence
          Length = 29588

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 238   attggaaaaatcccaaagag 257
             ||||||||||||||||||||
Sbjct: 28239 attggaaaaatcccaaagag 28258



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>emb|AL844527.6| Human DNA sequence from clone DAQB-314F24 on chromosome 6 Contains the
             5' end of the COL11A2 gene for collagen type XI alpha 2,
             the RXRB gene for retinoid X receptor, beta, the SLC39A7
             gene for solute carrier family 39 (zinc transporter),
             member 7, the HSD17B8 gene for hydroxysteroid (17-beta)
             dehydrogenase 8, the RING1 gene for ring finger protein 1,
             the ZNF314P pseudogene for zinc finger protein 314, the
             HTATSF1P pseudogene for HIV TAT specific factor 1, the
             HCG25 gene for HLA complex group 25, the VPS52 gene for
             vacuolar protein sorting 52 (yeast), the RPS18 gene for
             ribosomal protein S18, the B3GALT4 gene for
             UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase,
             polypeptide 4, the 3'end of the C6orf11 gene for
             chromosome 6 open reading frame 11, and 7 CpG islands,
             complete sequence
          Length = 109523

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 238   attggaaaaatcccaaagag 257
             ||||||||||||||||||||
Sbjct: 18971 attggaaaaatcccaaagag 18990



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>emb|AL662824.9| Human DNA sequence from clone XXbac-22I16 on chromosome 6 contains the
              HLA-DPA1 gene for major histocompatibility complex, class
              II, DP alpha 1, the HLA-DPB1 gene for major
              histocompatibility complex, class II, DP beta 1, a
              ribosomal protein L32 (RPL32) pseudogene, the HLA-DPA2
              pseudogene for major histocompatibility complex, class II,
              DP alpha 2, a pseudogene similar to part of collagens, a
              novel protein similar to major histocompatibility complex,
              class II, DP beta 2 (pseudogene), a major
              histocompatibility complex, class II, DP beta 1 pseudogene,
              two putative novel transcripts, the COL11A2 gene for
              collagen, type XI, alpha 2, the RXRB gene for retinoid X
              receptor, beta, the HKE4 gene for HLA-class II region
              expressed gene KE4, the 5' end of the HSD17B8 gene for
              hydroxysteroid (17-beta) dehydrogenase 8 and four CpG
              islands, complete sequence
          Length = 187964

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 238    attggaaaaatcccaaagag 257
              ||||||||||||||||||||
Sbjct: 172136 attggaaaaatcccaaagag 172155



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>emb|AL645940.4| Human DNA sequence from clone XXbac-157A10 on chromosome 6 contains the
             3' end of the gene for a novel protein similar to major
             histocompatibility complex, class II, DP beta 2
             pseudogene, a major histocompatibility complex, class II,
             DP beta 1 pseudogene, two putative novel transcripts, the
             COL11A2 gene for collagen, type XI, alpha 2, the RXRB gene
             for retinoid X receptor, beta, the HKE4 gene for HLA-class
             II region expressed gene KE4, the FABGL gene for
             hydroxysteroid (17-beta) dehydrogenase 8, the RING1 gene
             for ring finger protein 1, a zinger finger protein
             pseudogene, a HIV TAT specific factor 1 (HTATSF1)
             pseudogene, a novel transcript, the SACM2L gene for SAC2
             suppressor of actin mutations 2-like (yeast), the 5' end
             of the RPS18 gene for ribosomal protein S18 and six CpG
             islands, complete sequence
          Length = 158033

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 238   attggaaaaatcccaaagag 257
             ||||||||||||||||||||
Sbjct: 75552 attggaaaaatcccaaagag 75571



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>emb|AL590672.14| Human DNA sequence from clone CTD-2609B1 on chromosome 9 Contains the
             5' end of a malic enzyme pseudogene, complete sequence
          Length = 60532

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 492   tctttccctgtctctctttt 511
             ||||||||||||||||||||
Sbjct: 38330 tctttccctgtctctctttt 38311



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>emb|AL157780.12| Human DNA sequence from clone RP11-98E22 on chromosome 9q33.1-33.3
            Contains a CpG island, complete sequence
          Length = 160114

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 492  tctttccctgtctctctttt 511
            ||||||||||||||||||||
Sbjct: 6821 tctttccctgtctctctttt 6802



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>emb|AL031228.1|HS1033B10 Human DNA sequence from clone RP5-1033B10 on chromosome 6p21.2-21.31
             Contains the 3' end of the C6ORF11 gene for chromosome 6
             open reading frame 11 (BING4), the B3GALT4 gene for
             UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase
             polypeptide 4 (GalT4,Gal-T2,beta3GALT4,beta3Gal-T4), the
             RPS18 gene for 40S ribosomal protein S18 (KE3,HKE3,KE-3),
             the SACM2L gene for SAC2 suppressor of actin mutations
             2-like (yeast)(ARE1,SAC2,ARE-1,RP5-1033B10), a pseudogene
             similar to part of HTATSF1 (HIV TAT specific factor 1),
             the RING1 gene for ring finger protein 1 (RNF1), the
             HSD17B8 gene for hydroxysteroid (17-beta) dehydrogenase 8
             (KE6,FABG,HKE6,FABGL,RING2,H2-KE6,D6S2245E), the HKE4 gene
             for HLA class II region protein KE4
             (KE4,RING5,H2-KE4,D6S115E,D6S2244E), the RXRB gene for
             retinoid X receptor beta (NR2B2,RCoR-1,H-2RIIBP), the
             COL11A2 gene for collagen type XI alpha 2
             (HKE5,PARP,STL3,DFNA13), an HLA class II
             histocompatability antigen D or S beta pseudogene,the gene
             for a novel protein similar to major histocompatibility
             complex class II DP beta 1 precursor, three novel genes
             and seven CpG islands, complete sequence
          Length = 175737

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 238   attggaaaaatcccaaagag 257
             ||||||||||||||||||||
Sbjct: 95713 attggaaaaatcccaaagag 95694



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>ref|NM_001005449.1| Xenopus tropicalis baculoviral IAP repeat-containing 2 (birc2),
           mRNA
          Length = 2159

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 62  gctggccctcttccttccct 81
           ||||||||||||||||||||
Sbjct: 149 gctggccctcttccttccct 168



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>emb|CR936877.4| Human DNA sequence from clone DAMC-269O2 on chromosome 6, complete
             sequence
          Length = 50562

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 238   attggaaaaatcccaaagag 257
             ||||||||||||||||||||
Sbjct: 37803 attggaaaaatcccaaagag 37822



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>emb|CR354565.6| Human DNA sequence from clone DAMA-248N13 on chromosome 6, complete
             sequence
          Length = 61882

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 238   attggaaaaatcccaaagag 257
             ||||||||||||||||||||
Sbjct: 48503 attggaaaaatcccaaagag 48522



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>emb|CR759733.4| Human DNA sequence from clone DADB-100D22 on chromosome 6, complete
             sequence
          Length = 104205

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 238   attggaaaaatcccaaagag 257
             ||||||||||||||||||||
Sbjct: 62805 attggaaaaatcccaaagag 62824



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>gb|AC163712.3| Gallus gallus BAC clone CH261-29M9 from chromosome ul, complete sequence
          Length = 236367

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 491    ttctttccctgtctctcttt 510
              ||||||||||||||||||||
Sbjct: 109503 ttctttccctgtctctcttt 109522



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>gb|AC113376.2| Homo sapiens chromosome 5 clone RP11-262B5, complete sequence
          Length = 161498

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 568   cctggcaatttgttgttgtt 587
             ||||||||||||||||||||
Sbjct: 20939 cctggcaatttgttgttgtt 20958



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>gb|AC092659.2| Homo sapiens BAC clone RP11-495I15 from 4, complete sequence
          Length = 160529

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 488   tcattctttccctgtctctc 507
             ||||||||||||||||||||
Sbjct: 43928 tcattctttccctgtctctc 43909



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>ref|NM_067180.2| Caenorhabditis elegans Y75B8A.8 (Y75B8A.8) mRNA, complete cds
          Length = 2278

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 550  agcttctgaagtactggacc 569
            ||||||||||||||||||||
Sbjct: 1895 agcttctgaagtactggacc 1876



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>gb|AC148711.1| Macaca mulatta Major Histocompatibility Complex BAC MMU404O15, complete
              sequence
          Length = 157177

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 238    attggaaaaatcccaaagag 257
              ||||||||||||||||||||
Sbjct: 141499 attggaaaaatcccaaagag 141518



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>gb|AC148707.1| Macaca mulatta Major Histocompatibility Complex BAC MMU380B12,
            complete sequence
          Length = 171055

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 238  attggaaaaatcccaaagag 257
            ||||||||||||||||||||
Sbjct: 7161 attggaaaaatcccaaagag 7180



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>gb|AC148674.1| Macaca mulatta Major Histocompatibility Complex BAC MMU103F20, complete
             sequence
          Length = 174172

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 238   attggaaaaatcccaaagag 257
             ||||||||||||||||||||
Sbjct: 99725 attggaaaaatcccaaagag 99744



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>emb|AL590328.2|CNS07EG5 Human chromosome 14 DNA sequence BAC R-818K5 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 175210

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 159    cttaccctccttggagcagc 178
              ||||||||||||||||||||
Sbjct: 116815 cttaccctccttggagcagc 116834



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>gb|DQ324357.1| (Populus tomentosa x P. bolleana) x P. tomentosa var. truncata
           clone SS_J11 unknown genomic sequence
          Length = 506

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 59/72 (81%)
 Strand = Plus / Minus

                                                                       
Query: 409 tggcattgatgtacagctacttgaatatatctattagcaaaaacattgtacctgatgaaa 468
           |||| ||| |||||| |||||| || ||||| || |||||||||||  | || ||||| |
Sbjct: 335 tggctttgttgtacaactacttaaacatatcaataagcaaaaacataattccagatgaga 276

                       
Query: 469 tcaaagggaggg 480
           ||||||| ||||
Sbjct: 275 tcaaaggaaggg 264



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>emb|AL121839.3|CNS01DSQ Human chromosome 14 DNA sequence BAC R-747H7 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 200853

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 159   cttaccctccttggagcagc 178
             ||||||||||||||||||||
Sbjct: 12796 cttaccctccttggagcagc 12815



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>gb|AC174642.2| Mus musculus BAC clone RP24-362N12 from chromosome 7, complete sequence
          Length = 144527

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 61    agctggccctcttccttccc 80
             ||||||||||||||||||||
Sbjct: 33302 agctggccctcttccttccc 33321



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>gb|U32169.1|HSU32169 Human pro-a2 chain of collagen type XI (COL11A2) gene, complete cds
          Length = 28789

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 238  attggaaaaatcccaaagag 257
            ||||||||||||||||||||
Sbjct: 1721 attggaaaaatcccaaagag 1702



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>emb|AL033514.1|CEY75B8A Caenorhabditis elegans YAC Y75B8A, complete sequence
          Length = 298406

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 550    agcttctgaagtactggacc 569
              ||||||||||||||||||||
Sbjct: 100290 agcttctgaagtactggacc 100271



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>gb|AC132240.3| Mus musculus BAC clone RP24-411A22 from 3, complete sequence
          Length = 182978

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 109    ccatgtccatgttcccaggg 128
              ||||||||||||||||||||
Sbjct: 122996 ccatgtccatgttcccaggg 122977



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>gb|AC087229.27| Mus musculus strain C57BL/6J chromosome 1 clone rp23-191a19, complete
              sequence
          Length = 215043

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 117    atgttcccagggatggaccttacc 140
              ||||||||| ||||||||||||||
Sbjct: 124947 atgttcccaaggatggaccttacc 124970



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>dbj|AP004466.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT09C23, TM0001,
             complete sequence
          Length = 103397

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 177   gcctgttgtgtaatgttatccatg 200
             |||||||||||||| |||||||||
Sbjct: 26959 gcctgttgtgtaatattatccatg 26982



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>emb|AL845263.10| Mouse DNA sequence from clone RP23-337L20 on chromosome 2, complete
              sequence
          Length = 209967

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 489    cattctttccctgtctctct 508
              ||||||||||||||||||||
Sbjct: 168452 cattctttccctgtctctct 168471



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>emb|AL807390.11| Mouse DNA sequence from clone RP23-223F2 on chromosome 4, complete
             sequence
          Length = 150847

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 491   ttctttccctgtctctcttt 510
             ||||||||||||||||||||
Sbjct: 58371 ttctttccctgtctctcttt 58390


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,869,691
Number of Sequences: 3902068
Number of extensions: 6869691
Number of successful extensions: 129882
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 129721
Number of HSP's gapped (non-prelim): 161
length of query: 621
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 598
effective length of database: 17,143,297,704
effective search space: 10251692026992
effective search space used: 10251692026992
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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