ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal9f10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1GTR4_RAT (P19357) Solute carrier family 2, facilitated glucose t... 33 0.96
2GTR4_MOUSE (P14142) Solute carrier family 2, facilitated glucose... 33 0.96
3GTR4_HUMAN (P14672) Solute carrier family 2, facilitated glucose... 32 1.6
4ACON_GRAVE (P49609) Aconitate hydratase, mitochondrial precursor... 32 2.1
5GTR4_BOVIN (Q27994) Solute carrier family 2, facilitated glucose... 32 2.1

>GTR4_RAT (P19357) Solute carrier family 2, facilitated glucose transporter|
           member 4 (Glucose transporter type 4,
           insulin-responsive)
          Length = 509

 Score = 32.7 bits (73), Expect = 0.96
 Identities = 16/40 (40%), Positives = 23/40 (57%)
 Frame = -2

Query: 343 VYIILRLDGRVRRSGRGMPNWNDILKELPRLEDLLSKLER 224
           +YII  L+G  R+S + +  W D+   L  L+D   KLER
Sbjct: 230 LYIIRNLEGPARKSLKRLTGWADVSDALAELKDEKRKLER 269



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>GTR4_MOUSE (P14142) Solute carrier family 2, facilitated glucose transporter|
           member 4 (Glucose transporter type 4,
           insulin-responsive) (GT2)
          Length = 509

 Score = 32.7 bits (73), Expect = 0.96
 Identities = 16/40 (40%), Positives = 23/40 (57%)
 Frame = -2

Query: 343 VYIILRLDGRVRRSGRGMPNWNDILKELPRLEDLLSKLER 224
           +YII  L+G  R+S + +  W D+   L  L+D   KLER
Sbjct: 230 LYIIRNLEGPARKSLKRLTGWADVSDALAELKDEKRKLER 269



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>GTR4_HUMAN (P14672) Solute carrier family 2, facilitated glucose transporter|
           member 4 (Glucose transporter type 4,
           insulin-responsive)
          Length = 509

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 16/40 (40%), Positives = 23/40 (57%)
 Frame = -2

Query: 343 VYIILRLDGRVRRSGRGMPNWNDILKELPRLEDLLSKLER 224
           +YII  L+G  R+S + +  W D+   L  L+D   KLER
Sbjct: 230 LYIIQNLEGPARKSLKRLTGWADVSGVLAELKDEKRKLER 269



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>ACON_GRAVE (P49609) Aconitate hydratase, mitochondrial precursor (EC 4.2.1.3)|
           (Citrate hydro-lyase) (Aconitase)
          Length = 779

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 16/36 (44%), Positives = 24/36 (66%)
 Frame = +3

Query: 498 IEGADAADLVVPKPFGLPWTFCEAPKITGIRRTPRL 605
           + GADA D++V    GLPW   +APK+ G++ T +L
Sbjct: 206 VGGADAVDVMV----GLPWEL-KAPKVIGVKLTGKL 236



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>GTR4_BOVIN (Q27994) Solute carrier family 2, facilitated glucose transporter|
           member 4 (Glucose transporter type 4,
           insulin-responsive)
          Length = 509

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 15/40 (37%), Positives = 24/40 (60%)
 Frame = -2

Query: 343 VYIILRLDGRVRRSGRGMPNWNDILKELPRLEDLLSKLER 224
           +YII  L+G  R+S + +  W D+ + L  L++   KLER
Sbjct: 230 LYIIRNLEGPARKSLKRLTGWADVSEVLAELKEEKRKLER 269


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 90,880,975
Number of Sequences: 219361
Number of extensions: 1909566
Number of successful extensions: 4760
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4639
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4756
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6143359464
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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