| Clone Name | bags11c03 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | YO29_CAEEL (P34274) Hypothetical protein ZK688.9 | 53 | 2e-15 | 2 | GYRB_MYXXA (O33367) DNA gyrase subunit B (EC 5.99.1.3) | 32 | 1.3 | 3 | GCSP_XANCP (Q8PBK7) Glycine dehydrogenase [decarboxylating] (EC ... | 31 | 2.9 | 4 | APAH_PHOPR (Q6LV43) Bis(5'-nucleosyl)-tetraphosphatase, symmetri... | 30 | 3.8 | 5 | O2T27_HUMAN (Q8NH04) Olfactory receptor 2T27 (Olfactory receptor... | 30 | 5.0 |
|---|
>YO29_CAEEL (P34274) Hypothetical protein ZK688.9| Length = 281 Score = 53.1 bits (126), Expect(2) = 2e-15 Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 4/87 (4%) Frame = +2 Query: 122 YEDKLQTTHLPEMVFGESFVSIQHAQTGVKLHFNALDALKAWKQEALPPVQVPAAAKWKF 301 Y+ +L+ PEMVF + ++IQ + G + FNALDALK + LP V+V A+ W+ Sbjct: 59 YDRELKLEERPEMVFARNSLTIQFGRLG-SIEFNALDALKMVCADRLPDVKVGASTVWQS 117 Query: 302 RSNPADQVILD----YDYTFTTPYCGS 370 Q I + +D+T+TT Y G+ Sbjct: 118 ARQDRIQQISEHQKPFDWTYTTHYKGT 144 Score = 48.5 bits (114), Expect(2) = 2e-15 Identities = 24/44 (54%), Positives = 31/44 (70%) Frame = +3 Query: 444 TDDRIDLVALSAKEPILFYDEVILYEDELADSGISFLTARVRVM 575 T +RID+ L ++ ILF + L+EDELAD GI+ L ARVRVM Sbjct: 153 TTERIDMERLKRRDEILFSSSITLFEDELADHGIAQLLARVRVM 196
>GYRB_MYXXA (O33367) DNA gyrase subunit B (EC 5.99.1.3)| Length = 815 Score = 32.0 bits (71), Expect = 1.3 Identities = 20/59 (33%), Positives = 24/59 (40%) Frame = -2 Query: 403 CIASWFRTTSITPTVWCRECIVIIKYHLISRITSEFPFCCSRNLNRWQCLLFPCLESIK 227 C SW RT S TP WC + R S P C R + W C L C E ++ Sbjct: 658 CATSWCRTPSTTPRSWCS---TPTRMEPCGRRCSTTPSC--RRRSTWSCRL--CAEHLR 709
>GCSP_XANCP (Q8PBK7) Glycine dehydrogenase [decarboxylating] (EC 1.4.4.2)| (Glycine decarboxylase) (Glycine cleavage system P-protein) Length = 975 Score = 30.8 bits (68), Expect = 2.9 Identities = 16/45 (35%), Positives = 27/45 (60%) Frame = +3 Query: 342 IHSRHHTVGVMLVVLNQDAIQTSLDESSSLCWEDTDDRIDLVALS 476 IH++ H G+ L ++ +A+ SLDE+S+ R D+VAL+ Sbjct: 401 IHAKAHAAGINLRAIDSEAVGISLDETST--------RADVVALA 437
>APAH_PHOPR (Q6LV43) Bis(5'-nucleosyl)-tetraphosphatase, symmetrical (EC| 3.6.1.41) (Diadenosine tetraphosphatase) (Ap4A hydrolase) (Diadenosine 5',5'''-P1,P4-tetraphosphate pyrophosphohydrolase) Length = 273 Score = 30.4 bits (67), Expect = 3.8 Identities = 30/99 (30%), Positives = 36/99 (36%), Gaps = 1/99 (1%) Frame = -2 Query: 367 PTVWCRECIVIIKYHLISRITSEFPFCCSRNLNRWQCLLFPCLESIKRIEM*FDASLSVL 188 P W E I I +Y + FC C L P + + FD L Sbjct: 160 PDFWSNELIGIERYRFTINALTRMRFCYPDGRLDMACKLSPNDPDVGELVPWFD-----L 214 Query: 187 NRHKTLSKHHLR*MCRLKFIF-I*AHRCGVEDGPVVGLD 74 RH+ L K K IF A CG ED V+GLD Sbjct: 215 PRHQVLDK---------KIIFGHWAALCGHEDERVIGLD 244
>O2T27_HUMAN (Q8NH04) Olfactory receptor 2T27 (Olfactory receptor OR1-67)| Length = 317 Score = 30.0 bits (66), Expect = 5.0 Identities = 10/22 (45%), Positives = 16/22 (72%) Frame = -2 Query: 322 LISRITSEFPFCCSRNLNRWQC 257 L++ +T +FPFC SR +N + C Sbjct: 158 LLTPVTMQFPFCASREINHFFC 179 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 76,087,324 Number of Sequences: 219361 Number of extensions: 1499943 Number of successful extensions: 4142 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 4057 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4141 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4929664480 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)