ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags11c03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_469853.1| Oryza sativa (japonica cultivar-group), mRNA 545 e-152
2dbj|AK103511.1| Oryza sativa (japonica cultivar-group) cDNA clon... 545 e-152
3gb|AY105434.1| Zea mays PCO065631 mRNA sequence 466 e-128
4gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 190 3e-45
5gb|AC084282.6| Oryza sativa chromosome 3 BAC OSJNBb0048A17 genom... 190 3e-45
6dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 190 3e-45
7ref|NM_119592.3| Arabidopsis thaliana unknown protein AT4G34270 ... 76 1e-10
8gb|AY091389.1| Arabidopsis thaliana unknown protein (At4g34270) ... 76 1e-10
9gb|AY074349.1| Arabidopsis thaliana unknown protein (At4g34270) ... 76 1e-10
10gb|BT014035.1| Lycopersicon esculentum clone 133098R, mRNA sequence 72 2e-09
11gb|BT012082.1| Arabidopsis thaliana At4g34270 mRNA sequence 68 3e-08
12emb|BX828124.1|CNS0A3YV Arabidopsis thaliana Full-length cDNA Co... 68 3e-08
13emb|AL161585.2|ATCHRIV81 Arabidopsis thaliana DNA chromosome 4, ... 66 1e-07
14emb|AL035521.1|ATF10M10 Arabidopsis thaliana DNA chromosome 4, B... 66 1e-07
15gb|AF156565.1|AF156565 Arabidopsis thaliana putative cytoskeleta... 60 8e-06
16emb|X67216.1|ABPYRG A.brasilense pyrG gene for CTP synthetase 42 2.0
17emb|BX571862.1| Photorhabdus luminescens subsp. laumondii TTO1 c... 42 2.0
18dbj|AP006117.1| Lotus japonicus genomic DNA, chromosome 5, clone... 42 2.0
19dbj|AP002091.2| Homo sapiens genomic DNA, chromosome 6q25.2, clo... 42 2.0
20ref|NM_120538.2| Arabidopsis thaliana DME (DEMETER) AT5G04560 (D... 40 7.9
21gb|AC102749.10| Mus musculus chromosome 5, clone RP24-478I4, com... 40 7.9
22ref|XM_515234.1| PREDICTED: Pan troglodytes LOC458952 (LOC458952... 40 7.9
23gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 40 7.9
24gb|AC133217.2| Oryza sativa (japonica cultivar-group) chromosome... 40 7.9
25gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 40 7.9
26gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 40 7.9
27gb|DQ335243.1| Arabidopsis thaliana DNA glycosylase DEMETER (DME... 40 7.9
28gb|AC159197.3| Mus musculus BAC clone RP23-421P10 from chromosom... 40 7.9
29gb|AC002394.1|HUAC002394 Human Chromosome 16 BAC clone CIT987SK-... 40 7.9
30emb|AL591682.8| Human DNA sequence from clone RP11-356K24 on chr... 40 7.9
31emb|AL096819.17|HSDJ53A19 Human DNA sequence from clone RP1-53A1... 40 7.9
32emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 40 7.9
33emb|AL162875.1|ATT32M21 Arabidopsis thaliana DNA chromosome 5, B... 40 7.9
34emb|AL731728.10| Mouse DNA sequence from clone RP24-531N10 on ch... 40 7.9
35gb|AF521596.1| Arabidopsis thaliana DEMETER protein mRNA, comple... 40 7.9
36gb|AC093602.5| Homo sapiens BAC clone RP11-371F15 from 4, comple... 40 7.9
37gb|AC021241.10| Homo sapiens chromosome 18, clone RP11-350K6, co... 40 7.9
38gb|AC012533.11| Homo sapiens, clone RP11-62E9, complete sequence 40 7.9
39gb|AC067859.7| Homo sapiens chromosome 18, clone RP11-569D6, com... 40 7.9
40gb|AC105410.1| Homo sapiens chromosome 16 clone CTD-2348G11, com... 40 7.9
41gb|AC025445.5| Homo sapiens chromosome 5 clone CTD-2049O17, comp... 40 7.9
42dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
43dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
44gb|AC007880.2| Homo sapiens BAC clone RP11-323F11 from 2, comple... 40 7.9
45dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 7.9
46gb|AC092442.5| Homo sapiens BAC clone RP11-488I16 from 4, comple... 40 7.9
47dbj|AP004846.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
48emb|BX571975.7| Zebrafish DNA sequence from clone DKEY-77F3 in l... 40 7.9
49emb|AL935290.10| Zebrafish DNA sequence from clone CH211-270H11,... 40 7.9
50emb|BX548070.5| Zebrafish DNA sequence from clone CH211-245P7 in... 40 7.9
51emb|CT571266.4| Mouse DNA sequence from clone RP23-255L13 on chr... 40 7.9
52gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 40 7.9
53gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.9
54emb|AL034384.1|HSMTM0 Human chromosome Xq28, cosmid clones 7H3, ... 40 7.9 
>ref|XM_469853.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1133

 Score =  545 bits (275), Expect = e-152
 Identities = 505/579 (87%), Gaps = 2/579 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   gcccgacggcgggcgagctgaag-cggccggcgcggaggcgattccgagcggcgtgcggg 59
           ||||||||||||  ||||||||| ||||||||||||||||||| ||  |||| |||||||
Sbjct: 29  gcccgacggcggcggagctgaaggcggccggcgcggaggcgatccccggcggggtgcggg 88

                                                                       
Query: 60  tgaaggggtgggtcatccagtcccacaacgggcccatcctcaactccgcatctgtgagcc 119
           |||||||||||||||||| |||||||||||| ||||||||||||||||| ||  |    |
Sbjct: 89  tgaaggggtgggtcatccggtcccacaacggccccatcctcaactccgcctcgctccagc 148

                                                                       
Query: 120 tatatgaagataaacttcagacgacacatttacctgagatggtgtttggagagagttttg 179
           | | |||||||||||||||||| |||||||||||||||||||| ||||| ||||||||  
Sbjct: 149 tctttgaagataaacttcagacaacacatttacctgagatggtttttggggagagtttct 208

                                                                       
Query: 180 tgtctattcagcacgctcaaactggcgtcaaattacatttcaatgcgcttgatgctctca 239
           | ||| ||||||| |||||||||||| | | |||| |||||||||||||||||||||| |
Sbjct: 209 tatctcttcagcatgctcaaactggcattagattatatttcaatgcgcttgatgctctga 268

                                                                       
Query: 240 aggcatggaaacaagaggcattgccacctgttcaagttcctgctgcagcaaaatggaaat 299
           ||||||||||||| || ||| | ||||||||| |||||||||| |||||||| ||||| |
Sbjct: 269 aggcatggaaacatgaagcactaccacctgttgaagttcctgcggcagcaaagtggaagt 328

                                                                       
Query: 300 tcagaagtaatcctgctgatcaagtgatacttgattatgactatacattcacgacaccat 359
           |||| ||||| ||| |||||||||| |||||||||||||||||||||||||||||||| |
Sbjct: 329 tcaggagtaagccttctgatcaagtaatacttgattatgactatacattcacgacaccgt 388

                                                                       
Query: 360 actgtgggagtgatgcttgtggttctgaaccaagacgctatacaaacaagtttagatgaa 419
           ||  |||||||||||||| |||||| ||||| |||   ||| ||||||||||| ||||||
Sbjct: 389 acaatgggagtgatgctt-tggttcagaacccagatagtattcaaacaagtttggatgaa 447

                                                                       
Query: 420 tctagcagtttgtgttgggaggacactgatgaccggatcgaccttgttgccctttctgca 479
            |  ||| |||||||||||||||  |||| || ||||| ||||||||||||||||| |||
Sbjct: 448 ccccgcaatttgtgttgggaggattctgaggatcggattgaccttgttgccctttcagca 507

                                                                       
Query: 480 aaagaaccaattcttttctacgatgaggttatcttgtatgaagatgagctagctgatagt 539
           |||||||||||||||||||| || ||||||||| |||||||||||||| |||| |||| |
Sbjct: 508 aaagaaccaattcttttctatgacgaggttatcctgtatgaagatgagttagccgataat 567

                                                  
Query: 540 ggtatttcattccttacagcgcgagtgagggtgatgcca 578
           || ||||||||||| || | |||||||||||||||||||
Sbjct: 568 ggcatttcattcctcactgtgcgagtgagggtgatgcca 606
to top
>dbj|AK103511.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033131F13, full
           insert sequence
          Length = 1276

 Score =  545 bits (275), Expect = e-152
 Identities = 505/579 (87%), Gaps = 2/579 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   gcccgacggcgggcgagctgaag-cggccggcgcggaggcgattccgagcggcgtgcggg 59
           ||||||||||||  ||||||||| ||||||||||||||||||| ||  |||| |||||||
Sbjct: 260 gcccgacggcggcggagctgaaggcggccggcgcggaggcgatccccggcggggtgcggg 319

                                                                       
Query: 60  tgaaggggtgggtcatccagtcccacaacgggcccatcctcaactccgcatctgtgagcc 119
           |||||||||||||||||| |||||||||||| ||||||||||||||||| ||  |    |
Sbjct: 320 tgaaggggtgggtcatccggtcccacaacggccccatcctcaactccgcctcgctccagc 379

                                                                       
Query: 120 tatatgaagataaacttcagacgacacatttacctgagatggtgtttggagagagttttg 179
           | | |||||||||||||||||| |||||||||||||||||||| ||||| ||||||||  
Sbjct: 380 tctttgaagataaacttcagacaacacatttacctgagatggtttttggggagagtttct 439

                                                                       
Query: 180 tgtctattcagcacgctcaaactggcgtcaaattacatttcaatgcgcttgatgctctca 239
           | ||| ||||||| |||||||||||| | | |||| |||||||||||||||||||||| |
Sbjct: 440 tatctcttcagcatgctcaaactggcattagattatatttcaatgcgcttgatgctctga 499

                                                                       
Query: 240 aggcatggaaacaagaggcattgccacctgttcaagttcctgctgcagcaaaatggaaat 299
           ||||||||||||| || ||| | ||||||||| |||||||||| |||||||| ||||| |
Sbjct: 500 aggcatggaaacatgaagcactaccacctgttgaagttcctgcggcagcaaagtggaagt 559

                                                                       
Query: 300 tcagaagtaatcctgctgatcaagtgatacttgattatgactatacattcacgacaccat 359
           |||| ||||| ||| |||||||||| |||||||||||||||||||||||||||||||| |
Sbjct: 560 tcaggagtaagccttctgatcaagtaatacttgattatgactatacattcacgacaccgt 619

                                                                       
Query: 360 actgtgggagtgatgcttgtggttctgaaccaagacgctatacaaacaagtttagatgaa 419
           ||  |||||||||||||| |||||| ||||| |||   ||| ||||||||||| ||||||
Sbjct: 620 acaatgggagtgatgctt-tggttcagaacccagatagtattcaaacaagtttggatgaa 678

                                                                       
Query: 420 tctagcagtttgtgttgggaggacactgatgaccggatcgaccttgttgccctttctgca 479
            |  ||| |||||||||||||||  |||| || ||||| ||||||||||||||||| |||
Sbjct: 679 ccccgcaatttgtgttgggaggattctgaggatcggattgaccttgttgccctttcagca 738

                                                                       
Query: 480 aaagaaccaattcttttctacgatgaggttatcttgtatgaagatgagctagctgatagt 539
           |||||||||||||||||||| || ||||||||| |||||||||||||| |||| |||| |
Sbjct: 739 aaagaaccaattcttttctatgacgaggttatcctgtatgaagatgagttagccgataat 798

                                                  
Query: 540 ggtatttcattccttacagcgcgagtgagggtgatgcca 578
           || ||||||||||| || | |||||||||||||||||||
Sbjct: 799 ggcatttcattcctcactgtgcgagtgagggtgatgcca 837
to top
>gb|AY105434.1| Zea mays PCO065631 mRNA sequence
          Length = 1198

 Score =  466 bits (235), Expect = e-128
 Identities = 470/547 (85%), Gaps = 1/547 (0%)
 Strand = Plus / Plus

                                                                       
Query: 32  gcggaggcgattccgagcggcgtgcgggtgaaggggtgggtcatccagtcccacaacggg 91
           ||||||| ||||||  |||||||||| ||||||||||||||||||||||||||||| || 
Sbjct: 136 gcggaggtgattcccggcggcgtgcgagtgaaggggtgggtcatccagtcccacaaaggc 195

                                                                       
Query: 92  cccatcctcaactccgcatctgtgagcctatatgaagataaacttcagacgacacattta 151
           || ||||||||| |||| ||| ||   |  | ||||||| ||||||| || |||||||||
Sbjct: 196 cctatcctcaacgccgcctctctgcaacgctttgaagatgaacttcaaacaacacattta 255

                                                                       
Query: 152 cctgagatggtgtttggagagagttttgtgtctattcagcacgctcaaactggcgtcaaa 211
           ||||||||||| ||||||||||||||  ||||  |||| ||  | ||||||||| |||||
Sbjct: 256 cctgagatggtttttggagagagtttcttgtcacttcaacatacacaaactggcatcaaa 315

                                                                       
Query: 212 ttacatttcaatgcgcttgatgctctcaaggcatggaaacaagaggcattgccacctgtt 271
           || ||||| |||||||||||||| ||||||||||||||  |||||||| |||||||||||
Sbjct: 316 tttcattttaatgcgcttgatgcactcaaggcatggaagaaagaggcactgccacctgtt 375

                                                                       
Query: 272 caagttcctgctgcagcaaaatggaaattcagaagtaatcctgctgatcaagtgatactt 331
            | ||||||||||||||||||||||| ||||||||||| ||| |||| || || ||||||
Sbjct: 376 gaggttcctgctgcagcaaaatggaagttcagaagtaagccttctgaccaggttatactt 435

                                                                       
Query: 332 gattatgactatacattcacgacaccatactgtgggagtgatgcttgtggttctgaacca 391
           || || ||||||||||| ||||||||||| |||||||||||||| ||||||| |||||  
Sbjct: 436 gactacgactatacatttacgacaccatattgtgggagtgatgc-tgtggttgtgaactc 494

                                                                       
Query: 392 agacgctatacaaacaagtttagatgaatctagcagtttgtgttgggaggacactgatga 451
            | | ||  ||||||||||||||||| ||   ||| ||||||||||||||| ||| ||||
Sbjct: 495 tggcactccacaaacaagtttagatggatgcggcactttgtgttgggaggatactaatga 554

                                                                       
Query: 452 ccggatcgaccttgttgccctttctgcaaaagaaccaattcttttctacgatgaggttat 511
            ||||| ||| ||||||||||||| ||||||||||| |||||||||||||| ||||||||
Sbjct: 555 tcggattgacattgttgccctttcagcaaaagaacccattcttttctacgacgaggttat 614

                                                                       
Query: 512 cttgtatgaagatgagctagctgatagtggtatttcattccttacagcgcgagtgagggt 571
           |||||||||||||||| ||||||| | |||||| ||||| ||||| | ||||||||||||
Sbjct: 615 cttgtatgaagatgagttagctgacaatggtatctcatttcttactgtgcgagtgagggt 674

                  
Query: 572 gatgcca 578
            ||||||
Sbjct: 675 aatgcca 681
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  190 bits (96), Expect = 3e-45
 Identities = 159/180 (88%)
 Strand = Plus / Minus

                                                                            
Query: 124      tgaagataaacttcagacgacacatttacctgagatggtgtttggagagagttttgtgtc 183
                |||||||||||||||||| |||||||||||||||||||| ||||| ||||||||  | ||
Sbjct: 31153882 tgaagataaacttcagacaacacatttacctgagatggtttttggggagagtttcttatc 31153823

                                                                            
Query: 184      tattcagcacgctcaaactggcgtcaaattacatttcaatgcgcttgatgctctcaaggc 243
                | ||||||| |||||||||||| | | |||| |||||||||||||||||||||| |||||
Sbjct: 31153822 tcttcagcatgctcaaactggcattagattatatttcaatgcgcttgatgctctgaaggc 31153763

                                                                            
Query: 244      atggaaacaagaggcattgccacctgttcaagttcctgctgcagcaaaatggaaattcag 303
                ||||||||| || ||| | ||||||||| |||||||||| |||||||| ||||| |||||
Sbjct: 31153762 atggaaacatgaagcactaccacctgttgaagttcctgcggcagcaaagtggaagttcag 31153703



 Score =  137 bits (69), Expect = 5e-29
 Identities = 100/109 (91%), Gaps = 1/109 (0%)
 Strand = Plus / Minus

                                                                            
Query: 1        gcccgacggcgggcgagctgaag-cggccggcgcggaggcgattccgagcggcgtgcggg 59
                ||||||||||||  ||||||||| ||||||||||||||||||| ||  |||| |||||||
Sbjct: 31154685 gcccgacggcggcggagctgaaggcggccggcgcggaggcgatccccggcggggtgcggg 31154626

                                                                 
Query: 60       tgaaggggtgggtcatccagtcccacaacgggcccatcctcaactccgc 108
                |||||||||||||||||| |||||||||||| |||||||||||||||||
Sbjct: 31154625 tgaaggggtgggtcatccggtcccacaacggccccatcctcaactccgc 31154577



 Score =  109 bits (55), Expect = 1e-20
 Identities = 94/107 (87%)
 Strand = Plus / Minus

                                                                            
Query: 402      caaacaagtttagatgaatctagcagtttgtgttgggaggacactgatgaccggatcgac 461
                ||||||||||| |||||| |  ||| |||||||||||||||  |||| || ||||| |||
Sbjct: 31153148 caaacaagtttggatgaaccccgcaatttgtgttgggaggattctgaggatcggattgac 31153089

                                                               
Query: 462      cttgttgccctttctgcaaaagaaccaattcttttctacgatgaggt 508
                |||||||||||||| ||||||||||||||||||||||| || |||||
Sbjct: 31153088 cttgttgccctttcagcaaaagaaccaattcttttctatgacgaggt 31153042



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 78/86 (90%), Gaps = 1/86 (1%)
 Strand = Plus / Minus

                                                                            
Query: 305      agtaatcctgctgatcaagtgatacttgattatgactatacattcacgacaccatactgt 364
                ||||| ||| |||||||||| |||||||||||||||||||||||||||||||| |||  |
Sbjct: 31153361 agtaagccttctgatcaagtaatacttgattatgactatacattcacgacaccgtacaat 31153302

                                          
Query: 365      gggagtgatgcttgtggttctgaacc 390
                ||||||||||||| |||||| |||||
Sbjct: 31153301 gggagtgatgctt-tggttcagaacc 31153277



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 54/62 (87%)
 Strand = Plus / Minus

                                                                            
Query: 505      aggttatcttgtatgaagatgagctagctgatagtggtatttcattccttacagcgcgag 564
                |||||||| |||||||||||||| |||| |||| ||| ||||||||||| || | |||||
Sbjct: 31152901 aggttatcctgtatgaagatgagttagccgataatggcatttcattcctcactgtgcgag 31152842

                  
Query: 565      tg 566
                ||
Sbjct: 31152841 tg 31152840



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                                 
Query: 505      aggttatcttgtatgaagatgagctagctgatagtggtatttcattcct 553
                |||||||| |||||||||||||| ||||  ||| ||| |||||||||||
Sbjct: 31152981 aggttatcctgtatgaagatgagttagccaataatggcatttcattcct 31152933
to top
>gb|AC084282.6| Oryza sativa chromosome 3 BAC OSJNBb0048A17 genomic sequence, complete
             sequence
          Length = 128017

 Score =  190 bits (96), Expect = 3e-45
 Identities = 159/180 (88%)
 Strand = Plus / Minus

                                                                         
Query: 124   tgaagataaacttcagacgacacatttacctgagatggtgtttggagagagttttgtgtc 183
             |||||||||||||||||| |||||||||||||||||||| ||||| ||||||||  | ||
Sbjct: 74523 tgaagataaacttcagacaacacatttacctgagatggtttttggggagagtttcttatc 74464

                                                                         
Query: 184   tattcagcacgctcaaactggcgtcaaattacatttcaatgcgcttgatgctctcaaggc 243
             | ||||||| |||||||||||| | | |||| |||||||||||||||||||||| |||||
Sbjct: 74463 tcttcagcatgctcaaactggcattagattatatttcaatgcgcttgatgctctgaaggc 74404

                                                                         
Query: 244   atggaaacaagaggcattgccacctgttcaagttcctgctgcagcaaaatggaaattcag 303
             ||||||||| || ||| | ||||||||| |||||||||| |||||||| ||||| |||||
Sbjct: 74403 atggaaacatgaagcactaccacctgttgaagttcctgcggcagcaaagtggaagttcag 74344



 Score =  137 bits (69), Expect = 5e-29
 Identities = 100/109 (91%), Gaps = 1/109 (0%)
 Strand = Plus / Minus

                                                                         
Query: 1     gcccgacggcgggcgagctgaag-cggccggcgcggaggcgattccgagcggcgtgcggg 59
             ||||||||||||  ||||||||| ||||||||||||||||||| ||  |||| |||||||
Sbjct: 75326 gcccgacggcggcggagctgaaggcggccggcgcggaggcgatccccggcggggtgcggg 75267

                                                              
Query: 60    tgaaggggtgggtcatccagtcccacaacgggcccatcctcaactccgc 108
             |||||||||||||||||| |||||||||||| |||||||||||||||||
Sbjct: 75266 tgaaggggtgggtcatccggtcccacaacggccccatcctcaactccgc 75218



 Score =  109 bits (55), Expect = 1e-20
 Identities = 94/107 (87%)
 Strand = Plus / Minus

                                                                         
Query: 402   caaacaagtttagatgaatctagcagtttgtgttgggaggacactgatgaccggatcgac 461
             ||||||||||| |||||| |  ||| |||||||||||||||  |||| || ||||| |||
Sbjct: 73789 caaacaagtttggatgaaccccgcaatttgtgttgggaggattctgaggatcggattgac 73730

                                                            
Query: 462   cttgttgccctttctgcaaaagaaccaattcttttctacgatgaggt 508
             |||||||||||||| ||||||||||||||||||||||| || |||||
Sbjct: 73729 cttgttgccctttcagcaaaagaaccaattcttttctatgacgaggt 73683



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 78/86 (90%), Gaps = 1/86 (1%)
 Strand = Plus / Minus

                                                                         
Query: 305   agtaatcctgctgatcaagtgatacttgattatgactatacattcacgacaccatactgt 364
             ||||| ||| |||||||||| |||||||||||||||||||||||||||||||| |||  |
Sbjct: 74002 agtaagccttctgatcaagtaatacttgattatgactatacattcacgacaccgtacaat 73943

                                       
Query: 365   gggagtgatgcttgtggttctgaacc 390
             ||||||||||||| |||||| |||||
Sbjct: 73942 gggagtgatgctt-tggttcagaacc 73918



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 54/62 (87%)
 Strand = Plus / Minus

                                                                         
Query: 505   aggttatcttgtatgaagatgagctagctgatagtggtatttcattccttacagcgcgag 564
             |||||||| |||||||||||||| |||| |||| ||| ||||||||||| || | |||||
Sbjct: 73542 aggttatcctgtatgaagatgagttagccgataatggcatttcattcctcactgtgcgag 73483

               
Query: 565   tg 566
             ||
Sbjct: 73482 tg 73481



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                              
Query: 505   aggttatcttgtatgaagatgagctagctgatagtggtatttcattcct 553
             |||||||| |||||||||||||| ||||  ||| ||| |||||||||||
Sbjct: 73622 aggttatcctgtatgaagatgagttagccaataatggcatttcattcct 73574
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  190 bits (96), Expect = 3e-45
 Identities = 159/180 (88%)
 Strand = Plus / Minus

                                                                            
Query: 124      tgaagataaacttcagacgacacatttacctgagatggtgtttggagagagttttgtgtc 183
                |||||||||||||||||| |||||||||||||||||||| ||||| ||||||||  | ||
Sbjct: 31244405 tgaagataaacttcagacaacacatttacctgagatggtttttggggagagtttcttatc 31244346

                                                                            
Query: 184      tattcagcacgctcaaactggcgtcaaattacatttcaatgcgcttgatgctctcaaggc 243
                | ||||||| |||||||||||| | | |||| |||||||||||||||||||||| |||||
Sbjct: 31244345 tcttcagcatgctcaaactggcattagattatatttcaatgcgcttgatgctctgaaggc 31244286

                                                                            
Query: 244      atggaaacaagaggcattgccacctgttcaagttcctgctgcagcaaaatggaaattcag 303
                ||||||||| || ||| | ||||||||| |||||||||| |||||||| ||||| |||||
Sbjct: 31244285 atggaaacatgaagcactaccacctgttgaagttcctgcggcagcaaagtggaagttcag 31244226



 Score =  137 bits (69), Expect = 5e-29
 Identities = 100/109 (91%), Gaps = 1/109 (0%)
 Strand = Plus / Minus

                                                                            
Query: 1        gcccgacggcgggcgagctgaag-cggccggcgcggaggcgattccgagcggcgtgcggg 59
                ||||||||||||  ||||||||| ||||||||||||||||||| ||  |||| |||||||
Sbjct: 31245208 gcccgacggcggcggagctgaaggcggccggcgcggaggcgatccccggcggggtgcggg 31245149

                                                                 
Query: 60       tgaaggggtgggtcatccagtcccacaacgggcccatcctcaactccgc 108
                |||||||||||||||||| |||||||||||| |||||||||||||||||
Sbjct: 31245148 tgaaggggtgggtcatccggtcccacaacggccccatcctcaactccgc 31245100



 Score =  109 bits (55), Expect = 1e-20
 Identities = 94/107 (87%)
 Strand = Plus / Minus

                                                                            
Query: 402      caaacaagtttagatgaatctagcagtttgtgttgggaggacactgatgaccggatcgac 461
                ||||||||||| |||||| |  ||| |||||||||||||||  |||| || ||||| |||
Sbjct: 31243671 caaacaagtttggatgaaccccgcaatttgtgttgggaggattctgaggatcggattgac 31243612

                                                               
Query: 462      cttgttgccctttctgcaaaagaaccaattcttttctacgatgaggt 508
                |||||||||||||| ||||||||||||||||||||||| || |||||
Sbjct: 31243611 cttgttgccctttcagcaaaagaaccaattcttttctatgacgaggt 31243565



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 78/86 (90%), Gaps = 1/86 (1%)
 Strand = Plus / Minus

                                                                            
Query: 305      agtaatcctgctgatcaagtgatacttgattatgactatacattcacgacaccatactgt 364
                ||||| ||| |||||||||| |||||||||||||||||||||||||||||||| |||  |
Sbjct: 31243884 agtaagccttctgatcaagtaatacttgattatgactatacattcacgacaccgtacaat 31243825

                                          
Query: 365      gggagtgatgcttgtggttctgaacc 390
                ||||||||||||| |||||| |||||
Sbjct: 31243824 gggagtgatgctt-tggttcagaacc 31243800



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 54/62 (87%)
 Strand = Plus / Minus

                                                                            
Query: 505      aggttatcttgtatgaagatgagctagctgatagtggtatttcattccttacagcgcgag 564
                |||||||| |||||||||||||| |||| |||| ||| ||||||||||| || | |||||
Sbjct: 31243424 aggttatcctgtatgaagatgagttagccgataatggcatttcattcctcactgtgcgag 31243365

                  
Query: 565      tg 566
                ||
Sbjct: 31243364 tg 31243363



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                                 
Query: 505      aggttatcttgtatgaagatgagctagctgatagtggtatttcattcct 553
                |||||||| |||||||||||||| ||||  ||| ||| |||||||||||
Sbjct: 31243504 aggttatcctgtatgaagatgagttagccaataatggcatttcattcct 31243456
to top
>ref|NM_119592.3| Arabidopsis thaliana unknown protein AT4G34270 mRNA, complete cds
          Length = 1220

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 92/110 (83%)
 Strand = Plus / Plus

                                                                       
Query: 263 ccacctgttcaagttcctgctgcagcaaaatggaaattcagaagtaatcctgctgatcaa 322
           ||||||||| ||||||||||||||||| ||||||||||||| || || ||  || | || 
Sbjct: 336 ccacctgttgaagttcctgctgcagcacaatggaaattcaggagcaagccgtctcagcag 395

                                                             
Query: 323 gtgatacttgattatgactatacattcacgacaccatactgtgggagtga 372
           |||||||| |||||||| || || || || || ||||||||||| |||||
Sbjct: 396 gtgatactagattatgattacacgtttacaacgccatactgtggaagtga 445



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                   
Query: 480 aaagaaccaattcttttctacgatgaggttatcttgtatgaagatgagctagctga 535
           |||||||| ||||| ||||| ||||||||  | |||||||||||||| || |||||
Sbjct: 558 aaagaacctattctcttctatgatgaggtagttttgtatgaagatgaactggctga 613
to top
>gb|AY091389.1| Arabidopsis thaliana unknown protein (At4g34270) mRNA, complete cds
          Length = 904

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 92/110 (83%)
 Strand = Plus / Plus

                                                                       
Query: 263 ccacctgttcaagttcctgctgcagcaaaatggaaattcagaagtaatcctgctgatcaa 322
           ||||||||| ||||||||||||||||| ||||||||||||| || || ||  || | || 
Sbjct: 283 ccacctgttgaagttcctgctgcagcacaatggaaattcaggagcaagccgtctcagcag 342

                                                             
Query: 323 gtgatacttgattatgactatacattcacgacaccatactgtgggagtga 372
           |||||||| |||||||| || || || || || ||||||||||| |||||
Sbjct: 343 gtgatactagattatgattacacgtttacaacgccatactgtggaagtga 392



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                   
Query: 480 aaagaaccaattcttttctacgatgaggttatcttgtatgaagatgagctagctga 535
           |||||||| ||||| ||||| ||||||||  | |||||||||||||| || |||||
Sbjct: 505 aaagaacctattctcttctatgatgaggtagttttgtatgaagatgaactggctga 560
to top
>gb|AY074349.1| Arabidopsis thaliana unknown protein (At4g34270) mRNA, complete cds
          Length = 1092

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 92/110 (83%)
 Strand = Plus / Plus

                                                                       
Query: 263 ccacctgttcaagttcctgctgcagcaaaatggaaattcagaagtaatcctgctgatcaa 322
           ||||||||| ||||||||||||||||| ||||||||||||| || || ||  || | || 
Sbjct: 336 ccacctgttgaagttcctgctgcagcacaatggaaattcaggagcaagccgtctcagcag 395

                                                             
Query: 323 gtgatacttgattatgactatacattcacgacaccatactgtgggagtga 372
           |||||||| |||||||| || || || || || ||||||||||| |||||
Sbjct: 396 gtgatactagattatgattacacgtttacaacgccatactgtggaagtga 445



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                   
Query: 480 aaagaaccaattcttttctacgatgaggttatcttgtatgaagatgagctagctga 535
           |||||||| ||||| ||||| ||||||||  | |||||||||||||| || |||||
Sbjct: 558 aaagaacctattctcttctatgatgaggtagttttgtatgaagatgaactggctga 613
to top
>gb|BT014035.1| Lycopersicon esculentum clone 133098R, mRNA sequence
          Length = 1173

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 105/128 (82%)
 Strand = Plus / Plus

                                                                       
Query: 245 tggaaacaagaggcattgccacctgttcaagttcctgctgcagcaaaatggaaattcaga 304
           |||||||| ||||| ||||| |||||| ||||||| || || ||||||||||||||||| 
Sbjct: 299 tggaaacatgaggccttgccgcctgttgaagttccagcggctgcaaaatggaaattcagg 358

                                                                       
Query: 305 agtaatcctgctgatcaagtgatacttgattatgactatacattcacgacaccatactgt 364
           ||||| |||    | || ||| | || || ||||||||||| ||||| ||||| ||||||
Sbjct: 359 agtaaacctttgcaacaggtggtgctcgactatgactataccttcacaacaccttactgt 418

                   
Query: 365 gggagtga 372
           || |||||
Sbjct: 419 ggaagtga 426
to top
>gb|BT012082.1| Arabidopsis thaliana At4g34270 mRNA sequence
          Length = 693

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 91/110 (82%)
 Strand = Plus / Plus

                                                                       
Query: 263 ccacctgttcaagttcctgctgcagcaaaatggaaattcagaagtaatcctgctgatcaa 322
           ||||||||| ||||||||||||||||| ||||||||||||| || || ||  || | || 
Sbjct: 103 ccacctgttgaagttcctgctgcagcacaatggaaattcaggagcaagccgtctcagcag 162

                                                             
Query: 323 gtgatacttgattatgactatacattcacgacaccatactgtgggagtga 372
            ||||||| |||||||| || || || || || ||||||||||| |||||
Sbjct: 163 atgatactagattatgattacacgtttacaacgccatactgtggaagtga 212



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                   
Query: 480 aaagaaccaattcttttctacgatgaggttatcttgtatgaagatgagctagctga 535
           |||||||| ||||| ||||| ||||||||  | |||||||||||||| || |||||
Sbjct: 325 aaagaacctattctcttctatgatgaggtagttttgtatgaagatgaactggctga 380
to top
>emb|BX828124.1|CNS0A3YV Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH55ZE03 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 943

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 91/110 (82%)
 Strand = Plus / Plus

                                                                       
Query: 263 ccacctgttcaagttcctgctgcagcaaaatggaaattcagaagtaatcctgctgatcaa 322
           ||||||||| ||||||||||||||||| ||||||||||||| || || ||  || | || 
Sbjct: 290 ccacctgttgaagttcctgctgcagcacaatggaaattcaggagcaagccgtctcagcag 349

                                                             
Query: 323 gtgatacttgattatgactatacattcacgacaccatactgtgggagtga 372
           |||||||| |||||||| ||  | || || || ||||||||||| |||||
Sbjct: 350 gtgatactcgattatgattacgcgtttacaacgccatactgtggaagtga 399



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                   
Query: 480 aaagaaccaattcttttctacgatgaggttatcttgtatgaagatgagctagctga 535
           |||||||| ||||| ||||| ||||||||  | |||||||||||||| || |||||
Sbjct: 512 aaagaacctattctcttctatgatgaggtagttttgtatgaagatgaactggctga 567
to top
>emb|AL161585.2|ATCHRIV81 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 81
          Length = 195921

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 39/41 (95%)
 Strand = Plus / Minus

                                                      
Query: 263   ccacctgttcaagttcctgctgcagcaaaatggaaattcag 303
             ||||||||| ||||||||||||||||| |||||||||||||
Sbjct: 51144 ccacctgttgaagttcctgctgcagcacaatggaaattcag 51104
to top
>emb|AL035521.1|ATF10M10 Arabidopsis thaliana DNA chromosome 4, BAC clone F10M10 (ESSA project)
          Length = 114367

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 39/41 (95%)
 Strand = Plus / Minus

                                                      
Query: 263   ccacctgttcaagttcctgctgcagcaaaatggaaattcag 303
             ||||||||| ||||||||||||||||| |||||||||||||
Sbjct: 42625 ccacctgttgaagttcctgctgcagcacaatggaaattcag 42585
to top
>gb|AF156565.1|AF156565 Arabidopsis thaliana putative cytoskeletal protein mRNA, partial
           cds
          Length = 361

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 40/42 (95%), Gaps = 1/42 (2%)
 Strand = Plus / Plus

                                                     
Query: 263 ccacctgtt-caagttcctgctgcagcaaaatggaaattcag 303
           ||||||||| |||||||||||||||||| |||||||||||||
Sbjct: 307 ccacctgttgcaagttcctgctgcagcacaatggaaattcag 348
to top
>emb|X67216.1|ABPYRG A.brasilense pyrG gene for CTP synthetase
          Length = 2587

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 3   ccgacggcgggcgagctgaag 23
           |||||||||||||||||||||
Sbjct: 581 ccgacggcgggcgagctgaag 601
to top
>emb|BX571862.1| Photorhabdus luminescens subsp. laumondii TTO1 complete genome; segment
              4/17
          Length = 349519

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 257    gcattgccacctgttcaagtt 277
              |||||||||||||||||||||
Sbjct: 332687 gcattgccacctgttcaagtt 332707
to top
>dbj|AP006117.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT09H13, TM0200,
             complete sequence
          Length = 91393

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                      
Query: 315   ctgatcaagtgatacttgattatgactatacattcacgacaccatactgtgggagtg 371
             |||| ||||||||||| || || ||||||||||| || ||||| || ||||| ||||
Sbjct: 21572 ctgaacaagtgatactagactacgactatacatttacaacaccttattgtggaagtg 21516
to top
>dbj|AP002091.2| Homo sapiens genomic DNA, chromosome 6q25.2, clone: CITD-2058I12,
             complete sequence
          Length = 106763

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 268   tgttcaagttcctgctgcagc 288
             |||||||||||||||||||||
Sbjct: 34874 tgttcaagttcctgctgcagc 34894
to top
>ref|NM_120538.2| Arabidopsis thaliana DME (DEMETER) AT5G04560 (DME) mRNA, complete
           cds
          Length = 6963

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 159 tggtgtttggagagagtttt 178
           ||||||||||||||||||||
Sbjct: 499 tggtgtttggagagagtttt 518
to top
>gb|AC102749.10| Mus musculus chromosome 5, clone RP24-478I4, complete sequence
          Length = 173437

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 501   gatgaggttatcttgtatga 520
             ||||||||||||||||||||
Sbjct: 94737 gatgaggttatcttgtatga 94718
to top
>ref|XM_515234.1| PREDICTED: Pan troglodytes LOC458952 (LOC458952), mRNA
          Length = 456

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 291 aatggaaattcagaagtaat 310
           ||||||||||||||||||||
Sbjct: 187 aatggaaattcagaagtaat 206
to top
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 4       cgacggcgggcgagctgaag 23
               ||||||||||||||||||||
Sbjct: 1761622 cgacggcgggcgagctgaag 1761603
to top
>gb|AC133217.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
              OSJNBa0052H02, complete sequence
          Length = 159632

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 272    caagttcctgctgcagcaaa 291
              ||||||||||||||||||||
Sbjct: 125234 caagttcctgctgcagcaaa 125215
to top
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Minus

                                               
Query: 22      agcggccggcgcggaggcgattccgagcggcg 53
               ||||||||||||||||||| ||| ||||||||
Sbjct: 2390862 agcggccggcgcggaggcg-ttcggagcggcg 2390832
to top
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 4       cgacggcgggcgagctgaag 23
               ||||||||||||||||||||
Sbjct: 3007109 cgacggcgggcgagctgaag 3007090
to top
>gb|DQ335243.1| Arabidopsis thaliana DNA glycosylase DEMETER (DME) mRNA, complete
           cds, alternatively spliced
          Length = 6475

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 159 tggtgtttggagagagtttt 178
           ||||||||||||||||||||
Sbjct: 107 tggtgtttggagagagtttt 126
to top
>gb|AC159197.3| Mus musculus BAC clone RP23-421P10 from chromosome 12, complete sequence
          Length = 188400

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 247    gaaacaagaggcattgccacctgt 270
              |||||||||| |||||||||||||
Sbjct: 121962 gaaacaagagccattgccacctgt 121939
to top
>gb|AC002394.1|HUAC002394 Human Chromosome 16 BAC clone CIT987SK-A-211C6, complete sequence
          Length = 107910

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 132   aacttcagacgacacattta 151
             ||||||||||||||||||||
Sbjct: 71121 aacttcagacgacacattta 71140
to top
>emb|AL591682.8| Human DNA sequence from clone RP11-356K24 on chromosome 6 Contains part
             of gene KIAA1733 and a CpG island, complete sequence
          Length = 164000

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 488   aattcttttctacgatgaggttat 511
             |||||||||||| |||||||||||
Sbjct: 60666 aattcttttctatgatgaggttat 60643
to top
>emb|AL096819.17|HSDJ53A19 Human DNA sequence from clone RP1-53A19 on chromosome 1q25.1-31.1
             Contains the C1orf22 gene for chromosome 1 open reading
             frame 22, the 3' end of the C1orf24 gene for chromosome 1
             open reading frame 24 and a CpG island, complete sequence
          Length = 136188

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 372   atgcttgtggttctgaacca 391
             ||||||||||||||||||||
Sbjct: 46892 atgcttgtggttctgaacca 46911
to top
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 4       cgacggcgggcgagctgaag 23
               ||||||||||||||||||||
Sbjct: 2737080 cgacggcgggcgagctgaag 2737061
to top
>emb|AL162875.1|ATT32M21 Arabidopsis thaliana DNA chromosome 5, BAC clone T32M21 (ESSA project)
          Length = 93045

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 159   tggtgtttggagagagtttt 178
             ||||||||||||||||||||
Sbjct: 66387 tggtgtttggagagagtttt 66406
to top
>emb|AL731728.10| Mouse DNA sequence from clone RP24-531N10 on chromosome 11 Contains
             part of the Car10 gene for carbonic anhydrase 10, complete
             sequence
          Length = 146735

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 93    ccatcctcaactccgcatct 112
             ||||||||||||||||||||
Sbjct: 28904 ccatcctcaactccgcatct 28885
to top
>gb|AF521596.1| Arabidopsis thaliana DEMETER protein mRNA, complete cds
          Length = 6867

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 159 tggtgtttggagagagtttt 178
           ||||||||||||||||||||
Sbjct: 499 tggtgtttggagagagtttt 518
to top
>gb|AC093602.5| Homo sapiens BAC clone RP11-371F15 from 4, complete sequence
          Length = 120834

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 286    agcaaaatggaaattcagaa 305
              ||||||||||||||||||||
Sbjct: 108343 agcaaaatggaaattcagaa 108362
to top
>gb|AC021241.10| Homo sapiens chromosome 18, clone RP11-350K6, complete sequence
          Length = 160748

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 280    tgctgcagcaaaatggaaattcag 303
              |||||||| |||||||||||||||
Sbjct: 160647 tgctgcaggaaaatggaaattcag 160670
to top
>gb|AC012533.11| Homo sapiens, clone RP11-62E9, complete sequence
          Length = 191358

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 200   actggcgtcaaattacattt 219
             ||||||||||||||||||||
Sbjct: 63390 actggcgtcaaattacattt 63409
to top
>gb|AC067859.7| Homo sapiens chromosome 18, clone RP11-569D6, complete sequence
          Length = 195609

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 280   tgctgcagcaaaatggaaattcag 303
             |||||||| |||||||||||||||
Sbjct: 75483 tgctgcaggaaaatggaaattcag 75506
to top
>gb|AC105410.1| Homo sapiens chromosome 16 clone CTD-2348G11, complete sequence
          Length = 133838

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 132   aacttcagacgacacattta 151
             ||||||||||||||||||||
Sbjct: 19947 aacttcagacgacacattta 19966
to top
>gb|AC025445.5| Homo sapiens chromosome 5 clone CTD-2049O17, complete sequence
          Length = 184635

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 521    agatgagctagctgatagtg 540
              ||||||||||||||||||||
Sbjct: 124344 agatgagctagctgatagtg 124325
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 272     caagttcctgctgcagcaaa 291
               ||||||||||||||||||||
Sbjct: 2845427 caagttcctgctgcagcaaa 2845408
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 21       aagcggccggcgcggaggcg 40
                ||||||||||||||||||||
Sbjct: 33069286 aagcggccggcgcggaggcg 33069305
to top
>gb|AC007880.2| Homo sapiens BAC clone RP11-323F11 from 2, complete sequence
          Length = 122223

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 280   tgctgcagcaaaatggaaattcag 303
             ||||||||||||||||| ||||||
Sbjct: 51656 tgctgcagcaaaatggatattcag 51679
to top
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 23      gcggccggcgcggaggcgat 42
               ||||||||||||||||||||
Sbjct: 8339038 gcggccggcgcggaggcgat 8339057
to top
>gb|AC092442.5| Homo sapiens BAC clone RP11-488I16 from 4, complete sequence
          Length = 160193

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 72    tcatccagtcccacaacgggccca 95
             |||||||||||||||| |||||||
Sbjct: 46498 tcatccagtcccacaaagggccca 46475
to top
>dbj|AP004846.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1293_A01
          Length = 139121

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 21     aagcggccggcgcggaggcg 40
              ||||||||||||||||||||
Sbjct: 115226 aagcggccggcgcggaggcg 115245
to top
>emb|BX571975.7| Zebrafish DNA sequence from clone DKEY-77F3 in linkage group 18, complete
              sequence
          Length = 187272

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 479    aaaagaaccaattcttttct 498
              ||||||||||||||||||||
Sbjct: 142615 aaaagaaccaattcttttct 142634
to top
>emb|AL935290.10| Zebrafish DNA sequence from clone CH211-270H11, complete sequence
          Length = 129665

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 149  ttacctgagatggtgtttgg 168
            ||||||||||||||||||||
Sbjct: 2374 ttacctgagatggtgtttgg 2393
to top
>emb|BX548070.5| Zebrafish DNA sequence from clone CH211-245P7 in linkage group 18,
              complete sequence
          Length = 173372

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 479    aaaagaaccaattcttttct 498
              ||||||||||||||||||||
Sbjct: 143474 aaaagaaccaattcttttct 143493
to top
>emb|CT571266.4| Mouse DNA sequence from clone RP23-255L13 on chromosome 13, complete
              sequence
          Length = 176074

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 457    tcgaccttgttgccctttct 476
              ||||||||||||||||||||
Sbjct: 142664 tcgaccttgttgccctttct 142683
to top
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 4       cgacggcgggcgagctgaag 23
               ||||||||||||||||||||
Sbjct: 2140471 cgacggcgggcgagctgaag 2140490
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 272     caagttcctgctgcagcaaa 291
               ||||||||||||||||||||
Sbjct: 2854458 caagttcctgctgcagcaaa 2854439
to top
>emb|AL034384.1|HSMTM0 Human chromosome Xq28, cosmid clones 7H3, 14D7, C1230, 11E7, F1096,
             A12197, 12G8, A09100; complete sequence bases 1..217657
          Length = 217657

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 13    gcgagctgaagcggccggcg 32
             ||||||||||||||||||||
Sbjct: 78715 gcgagctgaagcggccggcg 78734


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,042,877
Number of Sequences: 3902068
Number of extensions: 5042877
Number of successful extensions: 97120
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 96487
Number of HSP's gapped (non-prelim): 623
length of query: 578
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 555
effective length of database: 17,143,297,704
effective search space: 9514530225720
effective search space used: 9514530225720
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top