ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags11a24
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_482519.1| Oryza sativa (japonica cultivar-group), mRNA 470 e-129
2ref|XM_507237.1| PREDICTED Oryza sativa (japonica cultivar-group... 470 e-129
3dbj|AK102785.1| Oryza sativa (japonica cultivar-group) cDNA clon... 462 e-127
4dbj|AK101681.1| Oryza sativa (japonica cultivar-group) cDNA clon... 462 e-127
5dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 153 8e-34
6dbj|AP003881.3| Oryza sativa (japonica cultivar-group) genomic D... 153 8e-34
7gb|AY109250.1| Zea mays PCO087848 mRNA sequence 129 1e-26
8ref|NM_121609.2| Arabidopsis thaliana Ran GTPase binding / chrom... 82 2e-12
9emb|BX830402.1|CNS0A1C5 Arabidopsis thaliana Full-length cDNA Co... 82 2e-12
10gb|AY085145.1| Arabidopsis thaliana clone 13316 mRNA, complete s... 82 2e-12
11ref|NM_111118.3| Arabidopsis thaliana Ran GTPase binding / chrom... 66 1e-07
12ref|NM_001035546.1| Arabidopsis thaliana Ran GTPase binding / ch... 64 5e-07
13gb|AC021640.7|ATAC021640 Arabidopsis thaliana chromosome III BAC... 64 5e-07
14emb|BX822851.1|CNS0A7AJ Arabidopsis thaliana Full-length cDNA Co... 64 5e-07
15emb|BX824696.1|CNS0A6SX Arabidopsis thaliana Full-length cDNA Co... 64 5e-07
16emb|BX823346.1|CNS0A6KE Arabidopsis thaliana Full-length cDNA Co... 64 5e-07
17gb|BT004597.1| Arabidopsis thaliana At3g02510 gene, complete cds 64 5e-07
18emb|AL391145.1|ATF1N13 Arabidopsis thaliana DNA chromosome 5, BA... 60 8e-06
19gb|DQ415920.1| Cleome spinosa clone BAC Cs3, complete sequence 58 3e-05
20gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome 42 2.0
21gb|AC105918.5| Homo sapiens BAC clone RP11-395M19 from 4, comple... 42 2.0
22gb|AC027016.4|AC027016 Homo sapiens chromosome 11, clone RP11-43... 42 2.0
23dbj|AB185800.1| Uncultured rumen bacterium gene for 16S rRNA, pa... 42 2.0
24dbj|AB185783.1| Uncultured rumen bacterium gene for 16S rRNA, pa... 42 2.0
25emb|CT573073.1| Kuenenia stuttgartiensis genome fragment KUST_C ... 42 2.0
26emb|CT573072.1| Kuenenia stuttgartiensis genome fragment KUST_D ... 42 2.0
27emb|BX294167.5| Zebrafish DNA sequence from clone CH211-244O18 i... 42 2.0
28emb|AL603864.8| Mouse DNA sequence from clone RP23-478N15 on chr... 42 2.0
29ref|XM_525332.1| PREDICTED: Pan troglodytes LOC469948 (LOC469948... 40 7.8
30gb|AF001763.1| Unidentified rumen bacterium RF31 16S ribosomal R... 40 7.8
31gb|AF018480.1| Unidentified rumen bacterium 12-101 16S ribosomal... 40 7.8
32ref|NM_020433.4| Homo sapiens junctophilin 2 (JPH2), transcript ... 40 7.8
33gb|AC148481.9| Medicago truncatula clone mth2-36d21, complete se... 40 7.8
34emb|AL034419.22|HS1108D11 Human DNA sequence from clone RP5-1108... 40 7.8
35gb|BC043206.2| Homo sapiens junctophilin 2, mRNA (cDNA clone IMA... 40 7.8
36gb|AC093240.2| Homo sapiens chromosome 5 clone RP11-103P4, compl... 40 7.8
37gb|AC010389.8| Homo sapiens chromosome 5 clone CTD-2077I5, compl... 40 7.8
38gb|AY244904.1| Uncultured rumen bacterium clone BF26 16S ribosom... 40 7.8
39gb|AC102549.6| Mus musculus chromosome 18, clone RP23-138E12, co... 40 7.8
40gb|AC133943.3| Mus musculus BAC clone RP24-104D12 from 3, comple... 40 7.8
41gb|AC170897.3| Mus musculus BAC clone RP23-416P3 from chromosome... 40 7.8
42gb|AC161449.4| Mus musculus BAC clone RP24-124N18 from chromosom... 40 7.8 
>ref|XM_482519.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1454

 Score =  470 bits (237), Expect = e-129
 Identities = 465/541 (85%)
 Strand = Plus / Plus

                                                                        
Query: 10   ggagggacatccccatcccgcagcgatgcgctctcaagctcaaagttcggcaagttgctg 69
            |||||||||| || ||||||||| | || || | |||||| ||||| |||||||||||||
Sbjct: 556  ggagggacattccgatcccgcaggggtgtgcccccaagctgaaagtccggcaagttgctg 615

                                                                        
Query: 70   cgggtggcactcattcagtggttttgacacaagaaggtcatgtttggacatggggacaac 129
            | || || || || || || || ||||||||||| || ||||||||||||||||||||||
Sbjct: 616  ctggagggacacactcggtcgtcttgacacaagatggccatgtttggacatggggacaac 675

                                                                        
Query: 130  cgtggcctccgggtgatatcaaaaacatatctacgccagtacgtgtgcaagggcttgagc 189
            | |||||||| || ||||||||  | |||||||| ||||| || |||||||| |||||| 
Sbjct: 676  catggcctccaggcgatatcaagcaaatatctacaccagtgcgggtgcaaggccttgaga 735

                                                                        
Query: 190  aagtgagcatgattgctgtaggggcattccataatttggcactgtcagtagacagaatct 249
            | || |   ||||||||||||| ||||||||||||||||| ||  ||| |||  |||| |
Sbjct: 736  atgtaaaggtgattgctgtaggtgcattccataatttggctctaacagaagatggaattt 795

                                                                        
Query: 250  tgtgggcatggggtaataatgaatatggccagctggggattggagatacccaaccgagat 309
            |||||||||||||||| ||||| ||||| || ||||| | ||||||||| ||||| ||||
Sbjct: 796  tgtgggcatggggtaacaatgagtatggtcaactgggcactggagatactcaaccaagat 855

                                                                        
Query: 310  cacaaccaatccgtgttgaagggctatctaacctttcattggttgacattgctgctggag 369
            | ||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||
Sbjct: 856  cgcaaccaatccgtgttgaaggattatctgacctttcattggttgacattgctgctggag 915

                                                                        
Query: 370  gttggcattcagccgcattaactaaagaaggagaggtatatgcttggggaagaggagaac 429
            ||||||||||| | |||||||||||||| |||||||| ||||||||||| |||||||| |
Sbjct: 916  gttggcattcaactgcattaactaaagagggagaggtgtatgcttgggggagaggagagc 975

                                                                        
Query: 430  atgggaggctcggctttggggatgataagagcagccacatggtgccactacaggttcagc 489
            |||||||||| || ||||| |||||||| || || |||||||| || | | ||||| |||
Sbjct: 976  atgggaggcttggatttggagatgataaaagtagtcacatggttccccaaaaggttgagc 1035

                                                                        
Query: 490  ttctagctggagaggatattgttcaggtatcatgtggagggacccattcagttgtgctaa 549
            |||| ||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||
Sbjct: 1036 ttcttgctggagaggatattattcaggtatcatgtggaggaacccattcagttgcgctaa 1095

             
Query: 550  c 550
            |
Sbjct: 1096 c 1096
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>ref|XM_507237.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1124_B05.9 mRNA
          Length = 1643

 Score =  470 bits (237), Expect = e-129
 Identities = 465/541 (85%)
 Strand = Plus / Plus

                                                                        
Query: 10   ggagggacatccccatcccgcagcgatgcgctctcaagctcaaagttcggcaagttgctg 69
            |||||||||| || ||||||||| | || || | |||||| ||||| |||||||||||||
Sbjct: 509  ggagggacattccgatcccgcaggggtgtgcccccaagctgaaagtccggcaagttgctg 568

                                                                        
Query: 70   cgggtggcactcattcagtggttttgacacaagaaggtcatgtttggacatggggacaac 129
            | || || || || || || || ||||||||||| || ||||||||||||||||||||||
Sbjct: 569  ctggagggacacactcggtcgtcttgacacaagatggccatgtttggacatggggacaac 628

                                                                        
Query: 130  cgtggcctccgggtgatatcaaaaacatatctacgccagtacgtgtgcaagggcttgagc 189
            | |||||||| || ||||||||  | |||||||| ||||| || |||||||| |||||| 
Sbjct: 629  catggcctccaggcgatatcaagcaaatatctacaccagtgcgggtgcaaggccttgaga 688

                                                                        
Query: 190  aagtgagcatgattgctgtaggggcattccataatttggcactgtcagtagacagaatct 249
            | || |   ||||||||||||| ||||||||||||||||| ||  ||| |||  |||| |
Sbjct: 689  atgtaaaggtgattgctgtaggtgcattccataatttggctctaacagaagatggaattt 748

                                                                        
Query: 250  tgtgggcatggggtaataatgaatatggccagctggggattggagatacccaaccgagat 309
            |||||||||||||||| ||||| ||||| || ||||| | ||||||||| ||||| ||||
Sbjct: 749  tgtgggcatggggtaacaatgagtatggtcaactgggcactggagatactcaaccaagat 808

                                                                        
Query: 310  cacaaccaatccgtgttgaagggctatctaacctttcattggttgacattgctgctggag 369
            | ||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||
Sbjct: 809  cgcaaccaatccgtgttgaaggattatctgacctttcattggttgacattgctgctggag 868

                                                                        
Query: 370  gttggcattcagccgcattaactaaagaaggagaggtatatgcttggggaagaggagaac 429
            ||||||||||| | |||||||||||||| |||||||| ||||||||||| |||||||| |
Sbjct: 869  gttggcattcaactgcattaactaaagagggagaggtgtatgcttgggggagaggagagc 928

                                                                        
Query: 430  atgggaggctcggctttggggatgataagagcagccacatggtgccactacaggttcagc 489
            |||||||||| || ||||| |||||||| || || |||||||| || | | ||||| |||
Sbjct: 929  atgggaggcttggatttggagatgataaaagtagtcacatggttccccaaaaggttgagc 988

                                                                        
Query: 490  ttctagctggagaggatattgttcaggtatcatgtggagggacccattcagttgtgctaa 549
            |||| ||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||
Sbjct: 989  ttcttgctggagaggatattattcaggtatcatgtggaggaacccattcagttgcgctaa 1048

             
Query: 550  c 550
            |
Sbjct: 1049 c 1049
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>dbj|AK102785.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107K23, full
            insert sequence
          Length = 1454

 Score =  462 bits (233), Expect = e-127
 Identities = 464/541 (85%)
 Strand = Plus / Plus

                                                                        
Query: 10   ggagggacatccccatcccgcagcgatgcgctctcaagctcaaagttcggcaagttgctg 69
            |||||||||| || ||||||||| | || || | |||||| ||||| |||||||||||||
Sbjct: 556  ggagggacattccgatcccgcaggggtgtgcccccaagctgaaagtccggcaagttgctg 615

                                                                        
Query: 70   cgggtggcactcattcagtggttttgacacaagaaggtcatgtttggacatggggacaac 129
            | || || || || || || || ||||||||||| || ||||||||||||||||||||||
Sbjct: 616  ctggagggacacactcggtcgtcttgacacaagatggccatgtttggacatggggacaac 675

                                                                        
Query: 130  cgtggcctccgggtgatatcaaaaacatatctacgccagtacgtgtgcaagggcttgagc 189
            | |||||||| || ||||||||  | |||||||| ||||| || |||||||| |||||| 
Sbjct: 676  catggcctccaggcgatatcaagcaaatatctacaccagtgcgggtgcaaggccttgaga 735

                                                                        
Query: 190  aagtgagcatgattgctgtaggggcattccataatttggcactgtcagtagacagaatct 249
            | || |   ||||||||||||| ||||||||||||||||| ||  ||| |||  |||| |
Sbjct: 736  atgtaaaggtgattgctgtaggtgcattccataatttggctctaacagaagatggaattt 795

                                                                        
Query: 250  tgtgggcatggggtaataatgaatatggccagctggggattggagatacccaaccgagat 309
            |||||||||||||||| ||||| ||||| || ||||| | ||||||||| ||||| ||||
Sbjct: 796  tgtgggcatggggtaacaatgagtatggtcaactgggcactggagatactcaaccaagat 855

                                                                        
Query: 310  cacaaccaatccgtgttgaagggctatctaacctttcattggttgacattgctgctggag 369
            | ||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||
Sbjct: 856  cgcaaccaatccgtgttgaaggattatctgacctttcattggttgacattgctgctggag 915

                                                                        
Query: 370  gttggcattcagccgcattaactaaagaaggagaggtatatgcttggggaagaggagaac 429
            ||||||||||| | |||||||||||||| |||||||| ||||||||||| |||||||| |
Sbjct: 916  gttggcattcaactgcattaactaaagagggagaggtgtatgcttgggggagaggagagc 975

                                                                        
Query: 430  atgggaggctcggctttggggatgataagagcagccacatggtgccactacaggttcagc 489
            |||||||||| || ||||| |||||||| || || |||||||| || | | ||||| |||
Sbjct: 976  atgggaggcttggatttggagatgataaaagtagtcacatggttccccaaaaggttgagc 1035

                                                                        
Query: 490  ttctagctggagaggatattgttcaggtatcatgtggagggacccattcagttgtgctaa 549
            |||| ||||||||||||||| |||||||||| |||||||| ||||||||||||| |||||
Sbjct: 1036 ttcttgctggagaggatattattcaggtatcgtgtggaggaacccattcagttgcgctaa 1095

             
Query: 550  c 550
            |
Sbjct: 1096 c 1096
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>dbj|AK101681.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033058K22, full
            insert sequence
          Length = 1643

 Score =  462 bits (233), Expect = e-127
 Identities = 461/537 (85%)
 Strand = Plus / Plus

                                                                        
Query: 14   ggacatccccatcccgcagcgatgcgctctcaagctcaaagttcggcaagttgctgcggg 73
            |||||| || ||||||||| | || || | |||||| ||||| |||||||||||||| ||
Sbjct: 513  ggacattccgatcccgcaggggtgtgcccccaagctgaaagtccggcaagttgctgctgg 572

                                                                        
Query: 74   tggcactcattcagtggttttgacacaagaaggtcatgtttggacatggggacaaccgtg 133
             || || || || || || ||||||||||| || ||||||||||||||||||||||| ||
Sbjct: 573  agggacacactcggtcgtcttgacacaagatggccatgtttggacatggggacaaccatg 632

                                                                        
Query: 134  gcctccgggtgatatcaaaaacatatctacgccagtacgtgtgcaagggcttgagcaagt 193
            |||||| || ||||||||  | |||||||| ||||| || |||||||| |||||| | ||
Sbjct: 633  gcctccaggcgatatcaagcaaatatctacaccagtgcgggtgcaaggccttgagaatgt 692

                                                                        
Query: 194  gagcatgattgctgtaggggcattccataatttggcactgtcagtagacagaatcttgtg 253
             |   ||||||||||||| ||||||||||||||||| ||  ||| |||  |||| |||||
Sbjct: 693  aaaggtgattgctgtaggtgcattccataatttggctctaacagaagatggaattttgtg 752

                                                                        
Query: 254  ggcatggggtaataatgaatatggccagctggggattggagatacccaaccgagatcaca 313
            |||||||||||| ||||| ||||| || ||||| | ||||||||| ||||| ||||| ||
Sbjct: 753  ggcatggggtaacaatgagtatggtcaactgggcactggagatactcaaccaagatcgca 812

                                                                        
Query: 314  accaatccgtgttgaagggctatctaacctttcattggttgacattgctgctggaggttg 373
            ||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||
Sbjct: 813  accaatccgtgttgaaggattatctgacctttcattggttgacattgctgctggaggttg 872

                                                                        
Query: 374  gcattcagccgcattaactaaagaaggagaggtatatgcttggggaagaggagaacatgg 433
            ||||||| | |||||||||||||| |||||||| ||||||||||| |||||||| |||||
Sbjct: 873  gcattcaactgcattaactaaagagggagaggtgtatgcttgggggagaggagagcatgg 932

                                                                        
Query: 434  gaggctcggctttggggatgataagagcagccacatggtgccactacaggttcagcttct 493
            |||||| || ||||| |||||||| || || |||||||| || | | ||||| |||||||
Sbjct: 933  gaggcttggatttggagatgataaaagtagtcacatggttccccaaaaggttgagcttct 992

                                                                     
Query: 494  agctggagaggatattgttcaggtatcatgtggagggacccattcagttgtgctaac 550
             ||||||||||||||| ||||||||||||||||||| ||||||||||||| ||||||
Sbjct: 993  tgctggagaggatattattcaggtatcatgtggaggaacccattcagttgcgctaac 1049
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  153 bits (77), Expect = 8e-34
 Identities = 167/197 (84%)
 Strand = Plus / Minus

                                                                            
Query: 156      atatctacgccagtacgtgtgcaagggcttgagcaagtgagcatgattgctgtaggggca 215
                |||||||| ||||| || |||||||| |||||| | || |   ||||||||||||| |||
Sbjct: 20815925 atatctacaccagtgcgggtgcaaggccttgagaatgtaaaggtgattgctgtaggtgca 20815866

                                                                            
Query: 216      ttccataatttggcactgtcagtagacagaatcttgtgggcatggggtaataatgaatat 275
                |||||||||||||| ||  ||| |||  |||| ||||||||||||||||| ||||| |||
Sbjct: 20815865 ttccataatttggctctaacagaagatggaattttgtgggcatggggtaacaatgagtat 20815806

                                                                            
Query: 276      ggccagctggggattggagatacccaaccgagatcacaaccaatccgtgttgaagggcta 335
                || || ||||| | ||||||||| ||||| ||||| ||||||||||||||||||||  ||
Sbjct: 20815805 ggtcaactgggcactggagatactcaaccaagatcgcaaccaatccgtgttgaaggatta 20815746

                                 
Query: 336      tctaacctttcattggt 352
                ||| |||||||||||||
Sbjct: 20815745 tctgacctttcattggt 20815729



 Score =  103 bits (52), Expect = 6e-19
 Identities = 100/116 (86%)
 Strand = Plus / Minus

                                                                            
Query: 403      aggtatatgcttggggaagaggagaacatgggaggctcggctttggggatgataagagca 462
                |||| ||||||||||| |||||||| ||||||||||| || ||||| |||||||| || |
Sbjct: 20815159 aggtgtatgcttgggggagaggagagcatgggaggcttggatttggagatgataaaagta 20815100

                                                                        
Query: 463      gccacatggtgccactacaggttcagcttctagctggagaggatattgttcaggta 518
                | |||||||| || | | ||||| ||||||| ||||||||||||||| ||||||||
Sbjct: 20815099 gtcacatggttccccaaaaggttgagcttcttgctggagaggatattattcaggta 20815044



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 56/59 (94%)
 Strand = Plus / Minus

                                                                           
Query: 350      ggttgacattgctgctggaggttggcattcagccgcattaactaaagaaggagaggtat 408
                ||||||||||||||||||||||||||||||| | |||||||||||||| ||||||||||
Sbjct: 20815345 ggttgacattgctgctggaggttggcattcaactgcattaactaaagagggagaggtat 20815287



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 51/56 (91%)
 Strand = Plus / Minus

                                                                        
Query: 93       ttgacacaagaaggtcatgtttggacatggggacaaccgtggcctccgggtgatat 148
                ||||||||||| || ||||||||||||||||||||||| |||||||| || |||||
Sbjct: 20816064 ttgacacaagatggccatgtttggacatggggacaaccatggcctccaggcgatat 20816009



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                      
Query: 513      caggtatcatgtggagggacccattcagttgtgctaac 550
                ||||||||||||||||| ||||||||||||| ||||||
Sbjct: 20814968 caggtatcatgtggaggaacccattcagttgcgctaac 20814931
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>dbj|AP003881.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1124_B05
          Length = 109917

 Score =  153 bits (77), Expect = 8e-34
 Identities = 167/197 (84%)
 Strand = Plus / Minus

                                                                         
Query: 156   atatctacgccagtacgtgtgcaagggcttgagcaagtgagcatgattgctgtaggggca 215
             |||||||| ||||| || |||||||| |||||| | || |   ||||||||||||| |||
Sbjct: 47058 atatctacaccagtgcgggtgcaaggccttgagaatgtaaaggtgattgctgtaggtgca 46999

                                                                         
Query: 216   ttccataatttggcactgtcagtagacagaatcttgtgggcatggggtaataatgaatat 275
             |||||||||||||| ||  ||| |||  |||| ||||||||||||||||| ||||| |||
Sbjct: 46998 ttccataatttggctctaacagaagatggaattttgtgggcatggggtaacaatgagtat 46939

                                                                         
Query: 276   ggccagctggggattggagatacccaaccgagatcacaaccaatccgtgttgaagggcta 335
             || || ||||| | ||||||||| ||||| ||||| ||||||||||||||||||||  ||
Sbjct: 46938 ggtcaactgggcactggagatactcaaccaagatcgcaaccaatccgtgttgaaggatta 46879

                              
Query: 336   tctaacctttcattggt 352
             ||| |||||||||||||
Sbjct: 46878 tctgacctttcattggt 46862



 Score =  103 bits (52), Expect = 6e-19
 Identities = 100/116 (86%)
 Strand = Plus / Minus

                                                                         
Query: 403   aggtatatgcttggggaagaggagaacatgggaggctcggctttggggatgataagagca 462
             |||| ||||||||||| |||||||| ||||||||||| || ||||| |||||||| || |
Sbjct: 46292 aggtgtatgcttgggggagaggagagcatgggaggcttggatttggagatgataaaagta 46233

                                                                     
Query: 463   gccacatggtgccactacaggttcagcttctagctggagaggatattgttcaggta 518
             | |||||||| || | | ||||| ||||||| ||||||||||||||| ||||||||
Sbjct: 46232 gtcacatggttccccaaaaggttgagcttcttgctggagaggatattattcaggta 46177



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 56/59 (94%)
 Strand = Plus / Minus

                                                                        
Query: 350   ggttgacattgctgctggaggttggcattcagccgcattaactaaagaaggagaggtat 408
             ||||||||||||||||||||||||||||||| | |||||||||||||| ||||||||||
Sbjct: 46478 ggttgacattgctgctggaggttggcattcaactgcattaactaaagagggagaggtat 46420



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 51/56 (91%)
 Strand = Plus / Minus

                                                                     
Query: 93    ttgacacaagaaggtcatgtttggacatggggacaaccgtggcctccgggtgatat 148
             ||||||||||| || ||||||||||||||||||||||| |||||||| || |||||
Sbjct: 47197 ttgacacaagatggccatgtttggacatggggacaaccatggcctccaggcgatat 47142



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                   
Query: 513   caggtatcatgtggagggacccattcagttgtgctaac 550
             ||||||||||||||||| ||||||||||||| ||||||
Sbjct: 46101 caggtatcatgtggaggaacccattcagttgcgctaac 46064
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>gb|AY109250.1| Zea mays PCO087848 mRNA sequence
          Length = 677

 Score =  129 bits (65), Expect = 1e-26
 Identities = 89/97 (91%)
 Strand = Plus / Plus

                                                                       
Query: 452 tgataagagcagccacatggtgccactacaggttcagcttctagctggagaggatattgt 511
           ||||||||| || ||||||||||| ||| ||||| |||||||||||||||||||||||||
Sbjct: 12  tgataagagtagtcacatggtgcccctaaaggttgagcttctagctggagaggatattgt 71

                                                
Query: 512 tcaggtatcatgtggagggacccattcagttgtgcta 548
           |||||||||||||||||| || |||||||||| ||||
Sbjct: 72  tcaggtatcatgtggaggaacacattcagttgcgcta 108
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>ref|NM_121609.2| Arabidopsis thaliana Ran GTPase binding / chromatin binding
           AT5G16040 mRNA, complete cds
          Length = 1745

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 86/101 (85%)
 Strand = Plus / Plus

                                                                       
Query: 348 ttggttgacattgctgctggaggttggcattcagccgcattaactaaagaaggagaggta 407
           |||||||| || ||||| || || ||||||||| | || ||||| || ||||||||||| 
Sbjct: 767 ttggttgatatcgctgcgggtggatggcattcaacagctttaaccaatgaaggagaggtt 826

                                                    
Query: 408 tatgcttggggaagaggagaacatgggaggctcggctttgg 448
           |||| ||||||||||||||| ||||| |||||||| |||||
Sbjct: 827 tatggttggggaagaggagagcatggaaggctcgggtttgg 867



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 54/62 (87%)
 Strand = Plus / Plus

                                                                       
Query: 249 ttgtgggcatggggtaataatgaatatggccagctggggattggagatacccaaccgaga 308
           |||||||| |||||||||||||||||||| || || || | |||||| || |||||||||
Sbjct: 668 ttgtgggcttggggtaataatgaatatggacaacttggaactggagacacacaaccgaga 727

             
Query: 309 tc 310
           ||
Sbjct: 728 tc 729



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                       
Query: 102 gaaggtcatgtttggacatggggacaaccgtggcctccgggtga 145
           |||||| |||| ||||| ||||| |||||||||||||| |||||
Sbjct: 521 gaaggttatgtatggacttggggtcaaccgtggcctcccggtga 564
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>emb|BX830402.1|CNS0A1C5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB78ZE02 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1348

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 86/101 (85%)
 Strand = Plus / Plus

                                                                       
Query: 348 ttggttgacattgctgctggaggttggcattcagccgcattaactaaagaaggagaggta 407
           |||||||| || ||||| || || ||||||||| | || ||||| || ||||||||||| 
Sbjct: 749 ttggttgatatcgctgcgggtggatggcattcaacagctttaaccaatgaaggagaggtt 808

                                                    
Query: 408 tatgcttggggaagaggagaacatgggaggctcggctttgg 448
           |||| ||||||||||||||| ||||| |||||||| |||||
Sbjct: 809 tatggttggggaagaggagagcatggaaggctcgggtttgg 849



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                       
Query: 102 gaaggtcatgtttggacatggggacaaccgtggcctccgggtga 145
           |||||| |||| ||||| ||||| |||||||||||||| |||||
Sbjct: 501 gaaggttatgtatggacttggggtcaaccgtggcctcccggtga 544



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 249 ttgtgggcatggggtaataatgaatatgg 277
           |||||||| ||||||| ||||||||||||
Sbjct: 648 ttgtgggcttggggtagtaatgaatatgg 676
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>gb|AY085145.1| Arabidopsis thaliana clone 13316 mRNA, complete sequence
          Length = 1389

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 86/101 (85%)
 Strand = Plus / Plus

                                                                       
Query: 348 ttggttgacattgctgctggaggttggcattcagccgcattaactaaagaaggagaggta 407
           |||||||| || ||||| || || ||||||||| | || ||||| || ||||||||||| 
Sbjct: 767 ttggttgatatcgctgcgggtggatggcattcaacagctttaaccaatgaaggagaggtg 826

                                                    
Query: 408 tatgcttggggaagaggagaacatgggaggctcggctttgg 448
           |||| ||||||||||||||| ||||| |||||||| |||||
Sbjct: 827 tatggttggggaagaggagagcatggaaggctcgggtttgg 867



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 54/62 (87%)
 Strand = Plus / Plus

                                                                       
Query: 249 ttgtgggcatggggtaataatgaatatggccagctggggattggagatacccaaccgaga 308
           |||||||| |||||||||||||||||||| || || || | |||||| || |||||||||
Sbjct: 668 ttgtgggcttggggtaataatgaatatggacaacttggaactggagacacacaaccgaga 727

             
Query: 309 tc 310
           ||
Sbjct: 728 tc 729



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                       
Query: 102 gaaggtcatgtttggacatggggacaaccgtggcctccgggtga 145
           |||||| |||| ||||| ||||| |||||||||||||| |||||
Sbjct: 521 gaaggttatgtatggacttggggtcaaccgtggcctcccggtga 564
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>ref|NM_111118.3| Arabidopsis thaliana Ran GTPase binding / chromatin binding AT3G02510
            transcript variant AT3G02510.1 mRNA, complete cds
          Length = 1554

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 158/199 (79%), Gaps = 3/199 (1%)
 Strand = Plus / Plus

                                                                        
Query: 348  ttggttgacattgctgctggaggttggcattcagccgcattaactaaagaaggagaggta 407
            ||||| || |||||||| || || ||||||||| | ||  ||||| |  |||||||||| 
Sbjct: 828  ttggtcgatattgctgcgggtggatggcattcaacggctctaactgataaaggagaggtg 887

                                                                        
Query: 408  tatgcttggggaagaggagaacatgggaggctcggctttgggg---atgataagagcagc 464
            |||| ||||||||||||||||||||| || |||||  |||| |   |||| |||||||||
Sbjct: 888  tatggttggggaagaggagaacatggaagactcgggcttggtgacaatgacaagagcagc 947

                                                                        
Query: 465  cacatggtgccactacaggttcagcttctagctggagaggatattgttcaggtatcatgt 524
             | ||||| ||||   | ||| | |||||||||| ||| |||||  ||||||| || |||
Sbjct: 948  aaaatggttccacagaaagttaatcttctagctgaagaagatataattcaggtttcttgt 1007

                               
Query: 525  ggagggacccattcagttg 543
            || || || ||||||||||
Sbjct: 1008 ggcggaacacattcagttg 1026



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 68/80 (85%)
 Strand = Plus / Plus

                                                                       
Query: 66  gctgcgggtggcactcattcagtggttttgacacaagaaggtcatgtttggacatgggga 125
           ||||| ||||| ||||| || |||||| | ||||  ||||||||||| ||||| ||||| 
Sbjct: 546 gctgcaggtggtactcactcggtggttcttacacgcgaaggtcatgtgtggacttggggt 605

                               
Query: 126 caaccgtggcctccgggtga 145
           |||||||||||||| |||||
Sbjct: 606 caaccgtggcctcccggtga 625
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>ref|NM_001035546.1| Arabidopsis thaliana Ran GTPase binding / chromatin binding
           AT3G02510 transcript variant AT3G02510.2 mRNA, complete
           cds
          Length = 1727

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 68/80 (85%)
 Strand = Plus / Plus

                                                                       
Query: 66  gctgcgggtggcactcattcagtggttttgacacaagaaggtcatgtttggacatgggga 125
           ||||| ||||| ||||| || |||||| | ||||  ||||||||||| ||||| ||||| 
Sbjct: 561 gctgcaggtggtactcactcggtggttcttacacgcgaaggtcatgtgtggacttggggt 620

                               
Query: 126 caaccgtggcctccgggtga 145
           |||||||||||||| |||||
Sbjct: 621 caaccgtggcctcccggtga 640



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 79/95 (83%)
 Strand = Plus / Plus

                                                                       
Query: 348 ttggttgacattgctgctggaggttggcattcagccgcattaactaaagaaggagaggta 407
           ||||| || |||||||| || || ||||||||| | ||  ||||| |  |||||||||| 
Sbjct: 843 ttggtcgatattgctgcgggtggatggcattcaacggctctaactgataaaggagaggtg 902

                                              
Query: 408 tatgcttggggaagaggagaacatgggaggctcgg 442
           |||| ||||||||||||||||||||| || |||||
Sbjct: 903 tatggttggggaagaggagaacatggaagactcgg 937
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>gb|AC021640.7|ATAC021640 Arabidopsis thaliana chromosome III BAC F16B3 genomic sequence,
             complete sequence
          Length = 103904

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 68/80 (85%)
 Strand = Plus / Minus

                                                                         
Query: 66    gctgcgggtggcactcattcagtggttttgacacaagaaggtcatgtttggacatgggga 125
             ||||| ||||| ||||| || |||||| | ||||  ||||||||||| ||||| ||||| 
Sbjct: 38950 gctgcaggtggtactcactcggtggttcttacacgcgaaggtcatgtgtggacttggggt 38891

                                 
Query: 126   caaccgtggcctccgggtga 145
             |||||||||||||| |||||
Sbjct: 38890 caaccgtggcctcccggtga 38871



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                     
Query: 403   aggtatatgcttggggaagaggagaacatgggaggctcgg 442
             |||| |||| ||||||||||||||||||||| || |||||
Sbjct: 38295 aggtgtatggttggggaagaggagaacatggaagactcgg 38256
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>emb|BX822851.1|CNS0A7AJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB69ZB10 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1333

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 68/80 (85%)
 Strand = Plus / Plus

                                                                       
Query: 66  gctgcgggtggcactcattcagtggttttgacacaagaaggtcatgtttggacatgggga 125
           ||||| ||||| ||||| || |||||| | ||||  ||||||||||| ||||| ||||| 
Sbjct: 500 gctgcaggtggtactcactcggtggttcttacacgcgaaggtcatgtgtggacttggggt 559

                               
Query: 126 caaccgtggcctccgggtga 145
           |||||||||||||| |||||
Sbjct: 560 caaccgtggcctcccggtga 579



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 71/86 (82%)
 Strand = Plus / Plus

                                                                       
Query: 348 ttggttgacattgctgctggaggttggcattcagccgcattaactaaagaaggagaggta 407
           ||||| || |||||||| || || ||||||||| | ||  ||||| |  ||| |||||| 
Sbjct: 782 ttggtcgatattgctgcgggtggatggcattcaacggctctaactgataaagaagaggtg 841

                                     
Query: 408 tatgcttggggaagaggagaacatgg 433
           |||| |||||||||||||||||||||
Sbjct: 842 tatggttggggaagaggagaacatgg 867
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>emb|BX824696.1|CNS0A6SX Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH65ZB02 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1457

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 68/80 (85%)
 Strand = Plus / Plus

                                                                       
Query: 66  gctgcgggtggcactcattcagtggttttgacacaagaaggtcatgtttggacatgggga 125
           ||||| ||||| ||||| || |||||| | ||||  ||||||||||| ||||| ||||| 
Sbjct: 546 gctgcaggtggtactcactcggtggttcttacacgcgaaggtcatgtgtggacttggggt 605

                               
Query: 126 caaccgtggcctccgggtga 145
           |||||||||||||| |||||
Sbjct: 606 caaccgtggcctcccggtga 625



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 72/86 (83%)
 Strand = Plus / Plus

                                                                       
Query: 348 ttggttgacattgctgctggaggttggcattcagccgcattaactaaagaaggagaggta 407
           ||||| || |||||||| || || ||||||||| | ||  ||||| |  |||||||||| 
Sbjct: 828 ttggtcgatattgctgcgggtggatggcattcaacggctctaactgataaaggagaggtg 887

                                     
Query: 408 tatgcttggggaagaggagaacatgg 433
           |||| |||||||||||||||||||||
Sbjct: 888 tatggttggggaagaggagaacatgg 913
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>emb|BX823346.1|CNS0A6KE Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS25ZD09 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1445

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 68/80 (85%)
 Strand = Plus / Plus

                                                                       
Query: 66  gctgcgggtggcactcattcagtggttttgacacaagaaggtcatgtttggacatgggga 125
           ||||| ||||| ||||| || |||||| | ||||  ||||||||||| ||||| ||||| 
Sbjct: 467 gctgcaggtggtactcactcggtggttcttacacgcgaaggtcatgtgtggacttggggt 526

                               
Query: 126 caaccgtggcctccgggtga 145
           |||||||||||||| |||||
Sbjct: 527 caaccgtggcctcccggtga 546



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 79/95 (83%)
 Strand = Plus / Plus

                                                                       
Query: 348 ttggttgacattgctgctggaggttggcattcagccgcattaactaaagaaggagaggta 407
           ||||| || |||||||| || || ||||||||| | ||  ||||| |  |||||||||| 
Sbjct: 749 ttggtcgatattgctgcgggtggatggcattcaacggctctaactgataaaggagaggtg 808

                                              
Query: 408 tatgcttggggaagaggagaacatgggaggctcgg 442
           |||| ||||||||||||||||||||| || |||||
Sbjct: 809 tatggttggggaagaggagaacatggaagactcgg 843
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>gb|BT004597.1| Arabidopsis thaliana At3g02510 gene, complete cds
          Length = 549

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 65/76 (85%)
 Strand = Plus / Plus

                                                                       
Query: 66  gctgcgggtggcactcattcagtggttttgacacaagaaggtcatgtttggacatgggga 125
           ||||| ||||| ||||| || |||||| | ||||  ||||||||||| ||||| ||||| 
Sbjct: 466 gctgcaggtggtactcactcggtggttcttacacgcgaaggtcatgtgtggacttggggt 525

                           
Query: 126 caaccgtggcctccgg 141
           ||||||||||||||||
Sbjct: 526 caaccgtggcctccgg 541
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>emb|AL391145.1|ATF1N13 Arabidopsis thaliana DNA chromosome 5, BAC clone F1N13 (ESSA project)
          Length = 74687

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 54/62 (87%)
 Strand = Plus / Minus

                                                                         
Query: 249   ttgtgggcatggggtaataatgaatatggccagctggggattggagatacccaaccgaga 308
             |||||||| |||||||||||||||||||| || || || | |||||| || |||||||||
Sbjct: 60537 ttgtgggcttggggtaataatgaatatggacaacttggaactggagacacacaaccgaga 60478

               
Query: 309   tc 310
             ||
Sbjct: 60477 tc 60476



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                           
Query: 403   aggtatatgcttggggaagaggagaacatgggaggctcggctttgg 448
             |||| |||| ||||||||||||||| ||||| |||||||| |||||
Sbjct: 60122 aggtttatggttggggaagaggagagcatggaaggctcgggtttgg 60077



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                         
Query: 102   gaaggtcatgtttggacatggggacaaccgtggcctccgggtga 145
             |||||| |||| ||||| ||||| |||||||||||||| |||||
Sbjct: 60774 gaaggttatgtatggacttggggtcaaccgtggcctcccggtga 60731
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>gb|DQ415920.1| Cleome spinosa clone BAC Cs3, complete sequence
          Length = 141360

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                               
Query: 403    aggtatatgcttggggaagaggagaacatgggaggctcggctttgggga 451
              |||| |||| |||||| ||||| ||||||||||||||||| ||||||||
Sbjct: 125448 aggtgtatggttgggggagaggggaacatgggaggctcgggtttgggga 125400



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 59/71 (83%)
 Strand = Plus / Minus

                                                                          
Query: 249    ttgtgggcatggggtaataatgaatatggccagctggggattggagatacccaaccgaga 308
              |||||||||||||| ||||| |||||||| || || || |  ||||| |||||||| |||
Sbjct: 126098 ttgtgggcatggggcaataacgaatatggacaacttggaacgggagacacccaaccaaga 126039

                         
Query: 309    tcacaaccaat 319
              || || |||||
Sbjct: 126038 tcccagccaat 126028



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 350    ggttgacattgctgctggaggttggca 376
              ||||||||||||||||||||| |||||
Sbjct: 125911 ggttgacattgctgctggaggatggca 125885
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>gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome
          Length = 2560265

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 58      ggcaagttgctgcgggtggca 78
               |||||||||||||||||||||
Sbjct: 1200882 ggcaagttgctgcgggtggca 1200902
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>gb|AC105918.5| Homo sapiens BAC clone RP11-395M19 from 4, complete sequence
          Length = 53838

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 469   tggtgccactacaggttcagc 489
             |||||||||||||||||||||
Sbjct: 44131 tggtgccactacaggttcagc 44111
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>gb|AC027016.4|AC027016 Homo sapiens chromosome 11, clone RP11-439M19, complete sequence
          Length = 165843

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 278   ccagctggggattggagatac 298
             |||||||||||||||||||||
Sbjct: 71631 ccagctggggattggagatac 71611
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>dbj|AB185800.1| Uncultured rumen bacterium gene for 16S rRNA, partial sequence,
           clone: U29-G02
          Length = 1528

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 17  catccccatcccgcagcgatg 37
           |||||||||||||||||||||
Sbjct: 236 catccccatcccgcagcgatg 216
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>dbj|AB185783.1| Uncultured rumen bacterium gene for 16S rRNA, partial sequence,
           clone: U29-E03
          Length = 1530

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 17  catccccatcccgcagcgatg 37
           |||||||||||||||||||||
Sbjct: 235 catccccatcccgcagcgatg 215
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>emb|CT573073.1| Kuenenia stuttgartiensis genome fragment KUST_C (3 of 5)
          Length = 893329

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 252    tgggcatggggtaataatgaatatggcca 280
              ||||||||||| ||||| |||||||||||
Sbjct: 714954 tgggcatggggaaataacgaatatggcca 714982
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>emb|CT573072.1| Kuenenia stuttgartiensis genome fragment KUST_D (4 of 5)
          Length = 896449

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                   
Query: 250    tgtgggcatggggtaataatgaatatggccagctggg 286
              |||||||||||||  |||||| ||||||||| |||||
Sbjct: 163910 tgtgggcatggggatataatggatatggccaactggg 163946
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>emb|BX294167.5| Zebrafish DNA sequence from clone CH211-244O18 in linkage group 5,
             complete sequence
          Length = 191302

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 182   gcttgagcaagtgagcatgat 202
             |||||||||||||||||||||
Sbjct: 74332 gcttgagcaagtgagcatgat 74312
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>emb|AL603864.8| Mouse DNA sequence from clone RP23-478N15 on chromosome 15, complete
              sequence
          Length = 178412

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 403    aggtatatgcttggggaagag 423
              |||||||||||||||||||||
Sbjct: 157220 aggtatatgcttggggaagag 157200
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>ref|XM_525332.1| PREDICTED: Pan troglodytes LOC469948 (LOC469948), mRNA
          Length = 1128

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 436 ggctcggctttggggatgat 455
           ||||||||||||||||||||
Sbjct: 935 ggctcggctttggggatgat 916
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>gb|AF001763.1| Unidentified rumen bacterium RF31 16S ribosomal RNA gene, partial
           sequence
          Length = 1426

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 17  catccccatcccgcagcgat 36
           ||||||||||||||||||||
Sbjct: 185 catccccatcccgcagcgat 166
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>gb|AF018480.1| Unidentified rumen bacterium 12-101 16S ribosomal RNA gene, partial
           sequence
          Length = 1450

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 17  catccccatcccgcagcgat 36
           ||||||||||||||||||||
Sbjct: 234 catccccatcccgcagcgat 215
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>ref|NM_020433.4| Homo sapiens junctophilin 2 (JPH2), transcript variant 1, mRNA
          Length = 4802

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 436  ggctcggctttggggatgat 455
            ||||||||||||||||||||
Sbjct: 2771 ggctcggctttggggatgat 2752
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>gb|AC148481.9| Medicago truncatula clone mth2-36d21, complete sequence
          Length = 105513

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 433   ggaggctcggctttggggatgataagag 460
             ||||||||||||||||| |||| |||||
Sbjct: 82339 ggaggctcggctttgggaatgaaaagag 82312
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>emb|AL034419.22|HS1108D11 Human DNA sequence from clone RP5-1108D11 on chromosome 20q12-13.11
              Contains the 3' end of the JPH2 gene for junctophilin 2
              (JP2, JP-2), the 3' end of the C20orf100 gene for a novel
              HMG (high mobility group) box protein similar to KIAA0737,
              KIAA0808 and TNRC9 (CAGF9) and two CpG islands, complete
              sequence
          Length = 152209

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 436    ggctcggctttggggatgat 455
              ||||||||||||||||||||
Sbjct: 104444 ggctcggctttggggatgat 104463
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>gb|BC043206.2| Homo sapiens junctophilin 2, mRNA (cDNA clone IMAGE:5295024), partial
            cds
          Length = 3115

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 436  ggctcggctttggggatgat 455
            ||||||||||||||||||||
Sbjct: 1061 ggctcggctttggggatgat 1042
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>gb|AC093240.2| Homo sapiens chromosome 5 clone RP11-103P4, complete sequence
          Length = 163673

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 409    atgcttggggaagaggagaa 428
              ||||||||||||||||||||
Sbjct: 144007 atgcttggggaagaggagaa 144026
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>gb|AC010389.8| Homo sapiens chromosome 5 clone CTD-2077I5, complete sequence
          Length = 134060

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 409   atgcttggggaagaggagaa 428
             ||||||||||||||||||||
Sbjct: 58888 atgcttggggaagaggagaa 58907
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>gb|AY244904.1| Uncultured rumen bacterium clone BF26 16S ribosomal RNA gene,
           partial sequence
          Length = 1498

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 17  catccccatcccgcagcgat 36
           ||||||||||||||||||||
Sbjct: 237 catccccatcccgcagcgat 218
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>gb|AC102549.6| Mus musculus chromosome 18, clone RP23-138E12, complete sequence
          Length = 172181

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 178   aagggcttgagcaagtgagcatga 201
             |||||||||||||| |||||||||
Sbjct: 53397 aagggcttgagcaactgagcatga 53420
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>gb|AC133943.3| Mus musculus BAC clone RP24-104D12 from 3, complete sequence
          Length = 218218

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 278   ccagctggggattggagataccca 301
             |||| |||||||||||||||||||
Sbjct: 94243 ccagatggggattggagataccca 94266
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>gb|AC170897.3| Mus musculus BAC clone RP23-416P3 from chromosome 13, complete sequence
          Length = 213810

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 223   atttggcactgtcagtagac 242
             ||||||||||||||||||||
Sbjct: 51433 atttggcactgtcagtagac 51414
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>gb|AC161449.4| Mus musculus BAC clone RP24-124N18 from chromosome 13, complete
             sequence
          Length = 150173

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 223   atttggcactgtcagtagac 242
             ||||||||||||||||||||
Sbjct: 23989 atttggcactgtcagtagac 24008


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,672,647
Number of Sequences: 3902068
Number of extensions: 4672647
Number of successful extensions: 83107
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 82983
Number of HSP's gapped (non-prelim): 120
length of query: 576
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 553
effective length of database: 17,143,297,704
effective search space: 9480243630312
effective search space used: 9480243630312
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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