ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags10l20
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ARGC_ARATH (Q93Z70) Probable N-acetyl-gamma-glutamyl-phosphate r... 42 4e-04
2ARGC_EHRRW (Q5HA98) N-acetyl-gamma-glutamyl-phosphate reductase ... 30 1.5
3ARGC_EHRRG (Q5FGD5) N-acetyl-gamma-glutamyl-phosphate reductase ... 30 1.5
4ARGC_STRCO (P54895) N-acetyl-gamma-glutamyl-phosphate reductase ... 30 1.9
5ARGC_MORPR (Q9K4Z6) N-acetyl-gamma-glutamyl-phosphate reductase ... 28 7.3
6ARGC_SHEON (P59309) N-acetyl-gamma-glutamyl-phosphate reductase ... 28 9.6
7ARGC_LEIXX (Q6AGD3) N-acetyl-gamma-glutamyl-phosphate reductase ... 28 9.6

>ARGC_ARATH (Q93Z70) Probable N-acetyl-gamma-glutamyl-phosphate reductase,|
           chloroplast precursor (EC 1.2.1.38) (AGPR)
           (N-acetyl-glutamate semialdehyde dehydrogenase) (NAGSA
           dehydrogenase)
          Length = 401

 Score = 42.4 bits (98), Expect = 4e-04
 Identities = 19/27 (70%), Positives = 24/27 (88%)
 Frame = +2

Query: 2   TISFTPNLICMKRGXQSTMFVEMAPGV 82
           T+SFTP+L+ M RG QST++VEMAPGV
Sbjct: 283 TVSFTPHLMPMIRGMQSTIYVEMAPGV 309



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>ARGC_EHRRW (Q5HA98) N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)|
           (AGPR) (N-acetyl-glutamate semialdehyde dehydrogenase)
           (NAGSA dehydrogenase)
          Length = 347

 Score = 30.4 bits (67), Expect = 1.5
 Identities = 12/27 (44%), Positives = 20/27 (74%)
 Frame = +2

Query: 5   ISFTPNLICMKRGXQSTMFVEMAPGVT 85
           + F PNLI +KRG  S++++E+  GV+
Sbjct: 232 VQFVPNLIPVKRGMLSSIYLELEEGVS 258



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>ARGC_EHRRG (Q5FGD5) N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)|
           (AGPR) (N-acetyl-glutamate semialdehyde dehydrogenase)
           (NAGSA dehydrogenase)
          Length = 347

 Score = 30.4 bits (67), Expect = 1.5
 Identities = 12/27 (44%), Positives = 20/27 (74%)
 Frame = +2

Query: 5   ISFTPNLICMKRGXQSTMFVEMAPGVT 85
           + F PNLI +KRG  S++++E+  GV+
Sbjct: 232 VQFVPNLIPVKRGMLSSIYLELEEGVS 258



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>ARGC_STRCO (P54895) N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)|
           (AGPR) (N-acetyl-glutamate semialdehyde dehydrogenase)
           (NAGSA dehydrogenase)
          Length = 342

 Score = 30.0 bits (66), Expect = 1.9
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = +2

Query: 2   TISFTPNLICMKRGXQSTMFVEMAPGVT 85
           T+SFTP L  M RG  +T   +  PGVT
Sbjct: 224 TVSFTPTLAPMPRGILATCTAKAKPGVT 251



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>ARGC_MORPR (Q9K4Z6) N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)|
           (AGPR) (N-acetyl-glutamate semialdehyde dehydrogenase)
           (NAGSA dehydrogenase)
          Length = 336

 Score = 28.1 bits (61), Expect = 7.3
 Identities = 13/27 (48%), Positives = 19/27 (70%)
 Frame = +2

Query: 5   ISFTPNLICMKRGXQSTMFVEMAPGVT 85
           + FTP+L   KRG  +T+ V++A GVT
Sbjct: 228 VIFTPHLGSFKRGILATINVKLAAGVT 254



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>ARGC_SHEON (P59309) N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)|
           (AGPR) (N-acetyl-glutamate semialdehyde dehydrogenase)
           (NAGSA dehydrogenase)
          Length = 326

 Score = 27.7 bits (60), Expect = 9.6
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +2

Query: 5   ISFTPNLICMKRGXQSTMFVEMAPGVT 85
           + FTP+L   KRG  +T+ V++ PG T
Sbjct: 224 VIFTPHLGNFKRGILATITVQLKPGTT 250



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>ARGC_LEIXX (Q6AGD3) N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)|
           (AGPR) (N-acetyl-glutamate semialdehyde dehydrogenase)
           (NAGSA dehydrogenase)
          Length = 347

 Score = 27.7 bits (60), Expect = 9.6
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +2

Query: 2   TISFTPNLICMKRGXQSTMFVEMAPGVT 85
           TISF P L+ M RG  +T    + PGV+
Sbjct: 229 TISFIPVLVPMSRGILATSTARVKPGVS 256


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,568,185
Number of Sequences: 219361
Number of extensions: 77840
Number of successful extensions: 198
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 197
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 198
length of database: 80,573,946
effective HSP length: 5
effective length of database: 79,477,141
effective search space used: 1907451384
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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