| Clone Name | bags11a12 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | gb|AY177404.1| Secale cereale O-methyltransferase mRNA, complete... | 54 | 3e-05 | 2 | gb|DP000050.1| Felis catus target 126 genomic scaffold | 40 | 0.48 | 3 | gb|AC158976.14| Mus musculus chromosome 15, clone RP24-71M3, com... | 36 | 7.5 | 4 | emb|CR637374.2|CNS0EQRO Tetraodon nigroviridis full-length cDNA | 36 | 7.5 | 5 | emb|AL133541.21| Human DNA sequence from clone RP1-126E20 on chr... | 36 | 7.5 |
|---|
>gb|AY177404.1| Secale cereale O-methyltransferase mRNA, complete cds Length = 1373 Score = 54.0 bits (27), Expect = 3e-05 Identities = 42/46 (91%), Gaps = 1/46 (2%) Strand = Plus / Plus Query: 9 gctgggacgtcccggtnactacatggaagctgcgctgggcatggct 54 |||||||| |||||| |||||||||||||||||||||| |||||| Sbjct: 408 gctgggacttcccgg-cactacatggaagctgcgctggggatggct 452
>gb|DP000050.1| Felis catus target 126 genomic scaffold Length = 269350 Score = 40.1 bits (20), Expect = 0.48 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 ggaagctgcgctgggcatgg 52 |||||||||||||||||||| Sbjct: 103061 ggaagctgcgctgggcatgg 103080
>gb|AC158976.14| Mus musculus chromosome 15, clone RP24-71M3, complete sequence Length = 182465 Score = 36.2 bits (18), Expect = 7.5 Identities = 24/26 (92%) Strand = Plus / Minus Query: 29 acatggaagctgcgctgggcatggct 54 |||||||||||| |||||| |||||| Sbjct: 106075 acatggaagctgggctggggatggct 106050
>emb|CR637374.2|CNS0EQRO Tetraodon nigroviridis full-length cDNA Length = 1398 Score = 36.2 bits (18), Expect = 7.5 Identities = 18/18 (100%) Strand = Plus / Plus Query: 28 tacatggaagctgcgctg 45 |||||||||||||||||| Sbjct: 119 tacatggaagctgcgctg 136
>emb|AL133541.21| Human DNA sequence from clone RP1-126E20 on chromosome 6 Contains the 3' end of the BMP6 gene for bone morphogenetic protein 6, the gene for a novel protein similar to protein disulfide isomerases and a CpG island, complete sequence Length = 117952 Score = 36.2 bits (18), Expect = 7.5 Identities = 18/18 (100%) Strand = Plus / Plus Query: 3 gtgctggctgggacgtcc 20 |||||||||||||||||| Sbjct: 47581 gtgctggctgggacgtcc 47598 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 409,515 Number of Sequences: 3902068 Number of extensions: 409515 Number of successful extensions: 67748 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 5 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 67741 Number of HSP's gapped (non-prelim): 7 length of query: 54 length of database: 17,233,045,268 effective HSP length: 20 effective length of query: 34 effective length of database: 17,155,003,908 effective search space: 583270132872 effective search space used: 583270132872 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 18 (36.2 bits)