ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags11a03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1GP107_MOUSE (Q8BUV8) Protein GPR107 precursor 99 7e-21
2GP108_RAT (Q6P6V6) Protein GPR108 precursor 91 2e-18
3GP108_MOUSE (Q91WD0) Protein GPR108 precursor (Lung seven transm... 89 1e-17
4GP108_HUMAN (Q9NPR9) Protein GPR108 precursor 89 1e-17
5GP107_HUMAN (Q5VW38) Protein GPR107 precursor (Lung seven transm... 77 4e-14
6NUDC_PASMU (P57965) NADH pyrophosphatase (EC 3.6.1.22) 31 3.2
7OLFM_RANCA (Q07081) Olfactomedin precursor (Olfactory mucus prot... 30 4.1

>GP107_MOUSE (Q8BUV8) Protein GPR107 precursor|
          Length = 551

 Score = 99.4 bits (246), Expect = 7e-21
 Identities = 46/96 (47%), Positives = 63/96 (65%)
 Frame = +2

Query: 14  CCCAVLFPVVWSMRSLRESSKTDGKAARTLAKLTLFRQFYVVVIGYLYFTRIIVYALKTI 193
           CC A+LFPVVWS+R L+E+S TDGKAA  LAKL LFR +YV+++ Y+YFTRII + LK  
Sbjct: 410 CCGAILFPVVWSIRHLQEASATDGKAAINLAKLRLFRHYYVLIVCYIYFTRIIAFLLKFA 469

Query: 194 TNYKYRWVSVAAEEVATXXXXXXXXXXXKPAERNQY 301
             ++++W+    +E AT           +PA  N Y
Sbjct: 470 VPFQWKWLYQLLDETATLVFFVLTGYKFRPASDNPY 505



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>GP108_RAT (Q6P6V6) Protein GPR108 precursor|
          Length = 577

 Score = 91.3 bits (225), Expect = 2e-18
 Identities = 44/96 (45%), Positives = 60/96 (62%)
 Frame = +2

Query: 14  CCCAVLFPVVWSMRSLRESSKTDGKAARTLAKLTLFRQFYVVVIGYLYFTRIIVYALKTI 193
           CC A+LFPVVWS+R L+++S TDGK A  LAKL LFR +YV+VI Y+YFTRII   L+  
Sbjct: 442 CCGAILFPVVWSIRHLQDASGTDGKVAMNLAKLKLFRHYYVMVICYIYFTRIIAILLRVA 501

Query: 194 TNYKYRWVSVAAEEVATXXXXXXXXXXXKPAERNQY 301
             ++++W+     E +T           +PA  N Y
Sbjct: 502 VPFQWQWLYQLLVESSTLAFFVLTGYKFQPAGDNPY 537



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>GP108_MOUSE (Q91WD0) Protein GPR108 precursor (Lung seven transmembrane|
           receptor 2)
          Length = 569

 Score = 89.0 bits (219), Expect = 1e-17
 Identities = 43/96 (44%), Positives = 60/96 (62%)
 Frame = +2

Query: 14  CCCAVLFPVVWSMRSLRESSKTDGKAARTLAKLTLFRQFYVVVIGYLYFTRIIVYALKTI 193
           CC A+LFPVVWS+R L+++S TDGK A  LA+L LFR +YV+VI Y+YFTRII   L+  
Sbjct: 435 CCGAILFPVVWSIRHLQDASGTDGKVAVNLARLKLFRHYYVMVICYIYFTRIIAILLQVA 494

Query: 194 TNYKYRWVSVAAEEVATXXXXXXXXXXXKPAERNQY 301
             ++++W+     E +T           +PA  N Y
Sbjct: 495 VPFQWQWLYQLLVESSTLAFFVLTGYKFQPAGDNPY 530



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>GP108_HUMAN (Q9NPR9) Protein GPR108 precursor|
          Length = 543

 Score = 88.6 bits (218), Expect = 1e-17
 Identities = 43/96 (44%), Positives = 59/96 (61%)
 Frame = +2

Query: 14  CCCAVLFPVVWSMRSLRESSKTDGKAARTLAKLTLFRQFYVVVIGYLYFTRIIVYALKTI 193
           CC A+LFPVVWS+R L+++S TDGK A  LAKL LFR +YV+VI Y+YFTRII   L+  
Sbjct: 409 CCGAILFPVVWSIRHLQDASGTDGKVAVNLAKLKLFRHYYVMVICYVYFTRIIAILLQVA 468

Query: 194 TNYKYRWVSVAAEEVATXXXXXXXXXXXKPAERNQY 301
             ++++W+     E +T           +P   N Y
Sbjct: 469 VPFQWQWLYQLLVEGSTLAFFVLTGYKFQPTGNNPY 504



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>GP107_HUMAN (Q5VW38) Protein GPR107 precursor (Lung seven transmembrane|
           receptor 1)
          Length = 600

 Score = 77.0 bits (188), Expect = 4e-14
 Identities = 46/144 (31%), Positives = 63/144 (43%), Gaps = 48/144 (33%)
 Frame = +2

Query: 14  CCCAVLFPVVWSMRSLRESSKTDGK----------------------------------- 88
           CC A+LFPVVWS+R L+E+S TDGK                                   
Sbjct: 411 CCGAILFPVVWSIRHLQEASATDGKGDSMGPLQQRANLRAGSRIESHHFAQADLELLASS 470

Query: 89  -------------AARTLAKLTLFRQFYVVVIGYLYFTRIIVYALKTITNYKYRWVSVAA 229
                        AA  LAKL LFR +YV+++ Y+YFTRII + LK    ++++W+    
Sbjct: 471 CPPASVSQRAGITAAINLAKLKLFRHYYVLIVCYIYFTRIIAFLLKLAVPFQWKWLYQLL 530

Query: 230 EEVATXXXXXXXXXXXKPAERNQY 301
           +E AT           +PA  N Y
Sbjct: 531 DETATLVFFVLTGYKFRPASDNPY 554



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>NUDC_PASMU (P57965) NADH pyrophosphatase (EC 3.6.1.22)|
          Length = 264

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
 Frame = +1

Query: 58  PAGVVQDRWQ-GCPNPRQAHALPPVLCRCDWILVLHKDHCLCAQDNHQ 198
           P  +VQ  W   C NP  +H   PV+C C  + V      L A  NHQ
Sbjct: 105 PTDLVQQEWAIQCQNPSCSHRTYPVICPCIIVAVRRGAQILLA--NHQ 150



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>OLFM_RANCA (Q07081) Olfactomedin precursor (Olfactory mucus protein)|
          Length = 464

 Score = 30.4 bits (67), Expect = 4.1
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +1

Query: 472 YICLCTVVNLHFCLFLLASNVAGETRGNLDCLC 570
           YICL T+V +H     +A N  G   G   C+C
Sbjct: 2   YICLLTLVLIHAAAAFVAQNATGILAGKDHCVC 34


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,146,326
Number of Sequences: 219361
Number of extensions: 1219317
Number of successful extensions: 3301
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3207
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3299
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5310515667
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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