| Clone Name | bags10k08 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC157508.1| Dasypus novemcinctus, clone Dasypus novemcinctus-10241875H10, complete sequence Length = 42729 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 280 atggatccttctccatcttcaaa 302 ||||||||||||||||||||||| Sbjct: 9751 atggatccttctccatcttcaaa 9729
>ref|NM_191142.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1821 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 156 gccgcatcaccgcgcccgccg 176 ||||||||||||||||||||| Sbjct: 95 gccgcatcaccgcgcccgccg 75
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 160 catcaccgcgcccgccgccca 180 ||||||||||||||||||||| Sbjct: 857047 catcaccgcgcccgccgccca 857027
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 156 gccgcatcaccgcgcccgccg 176 ||||||||||||||||||||| Sbjct: 30930539 gccgcatcaccgcgcccgccg 30930559
>dbj|AP002972.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0638D12 Length = 161277 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 156 gccgcatcaccgcgcccgccg 176 ||||||||||||||||||||| Sbjct: 130906 gccgcatcaccgcgcccgccg 130926
>gb|AC167562.5| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940122D9, complete sequence Length = 114898 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 160 catcaccgcgcccgccgccca 180 ||||||||||||||||||||| Sbjct: 84741 catcaccgcgcccgccgccca 84761
>gb|AC129585.12| Mus musculus chromosome 7, clone RP24-297P18, complete sequence Length = 163046 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 408 gtcttactccctgcagatgt 427 |||||||||||||||||||| Sbjct: 118344 gtcttactccctgcagatgt 118325 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 408 gtcttactccctgcagatgt 427 |||||||||||||||||||| Sbjct: 29244 gtcttactccctgcagatgt 29263 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 408 gtcttactccctgcagatgt 427 |||||||||||||||||||| Sbjct: 3942 gtcttactccctgcagatgt 3961
>gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome Length = 2560265 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 ccaccccatccagccgccgc 160 |||||||||||||||||||| Sbjct: 366713 ccaccccatccagccgccgc 366732
>ref|XM_656271.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN3759.2), mRNA Length = 639 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 accccatccagccgccgcat 162 |||||||||||||||||||| Sbjct: 417 accccatccagccgccgcat 398
>emb|AL353663.10| Human DNA sequence from clone RP5-1007B16 on chromosome 6, complete sequence Length = 77275 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 446 tgaggcaaggaggatggggaacag 469 ||||||| |||||||||||||||| Sbjct: 61080 tgaggcatggaggatggggaacag 61103
>gb|AC116686.15| Mus musculus chromosome 7, clone RP23-457H7, complete sequence Length = 223846 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 408 gtcttactccctgcagatgt 427 |||||||||||||||||||| Sbjct: 36154 gtcttactccctgcagatgt 36173
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 150 ccagccgccgcatcaccgcgcccgccgc 177 ||||||||||| ||| |||||||||||| Sbjct: 1801406 ccagccgccgcgtcagcgcgcccgccgc 1801433
>gb|DQ149153.1| Cercopithecine herpesvirus 16 strain X313, complete genome Length = 156487 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 243 gttcccgcatgacccccctcctcccgcg 270 ||||||| ||||||||||||| |||||| Sbjct: 34182 gttcccgaatgacccccctccgcccgcg 34155
>emb|AL928803.6| Mouse DNA sequence from clone RP23-319N14 on chromosome 2, complete sequence Length = 109092 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 449 ggcaaggaggatggggaaca 468 |||||||||||||||||||| Sbjct: 64435 ggcaaggaggatggggaaca 64454
>gb|AC112976.8| Mus musculus chromosome 7, clone RP24-475E2, complete sequence Length = 167823 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 408 gtcttactccctgcagatgt 427 |||||||||||||||||||| Sbjct: 165370 gtcttactccctgcagatgt 165389 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,379,921 Number of Sequences: 3902068 Number of extensions: 3379921 Number of successful extensions: 64286 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 15 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 64115 Number of HSP's gapped (non-prelim): 171 length of query: 540 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 517 effective length of database: 17,143,297,704 effective search space: 8863084912968 effective search space used: 8863084912968 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)