ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags10j15
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_475270.1| Oryza sativa (japonica cultivar-group), predic... 349 5e-93
2dbj|AK071740.1| Oryza sativa (japonica cultivar-group) cDNA clon... 349 5e-93
3dbj|AK059420.1| Oryza sativa (japonica cultivar-group) cDNA clon... 341 1e-90
4gb|AC130600.3| Oryza sativa (japonica cultivar-group) chromosome... 206 4e-50
5dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 206 4e-50
6dbj|AK105804.1| Oryza sativa (japonica cultivar-group) cDNA clon... 167 4e-38
7ref|NM_190823.1| Oryza sativa (japonica cultivar-group), predic... 121 2e-24
8dbj|AK101275.1| Oryza sativa (japonica cultivar-group) cDNA clon... 121 2e-24
9ref|NM_105862.3| Arabidopsis thaliana ATP binding / phosphotrans... 90 7e-15
10gb|BT022033.1| Arabidopsis thaliana At1g72040 gene, complete cds 90 7e-15
11gb|AY089150.1| Arabidopsis thaliana clone 3878 mRNA, complete se... 90 7e-15
12gb|AY459335.1| Oryza sativa (japonica cultivar-group) clone CL02... 82 2e-12
13dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 82 2e-12
14dbj|AP004669.3| Oryza sativa (japonica cultivar-group) genomic D... 82 2e-12
15dbj|AP003922.2| Oryza sativa (japonica cultivar-group) genomic D... 82 2e-12
16gb|AC069273.4|AC069273 Arabidopsis thaliana chromosome 1 BAC F28... 60 6e-06
17dbj|AK131259.1| Homo sapiens cDNA FLJ16191 fis, clone BRTHA20136... 58 3e-05
18gb|AF514776.1| Lycopersicon esculentum dCK/dGK-like deoxyribonuc... 54 4e-04
19gb|AC137871.18| Mus musculus chromosome 15, clone RP23-41B9, com... 44 0.38
20dbj|AP006693.1| Lotus japonicus genomic DNA, chromosome 4, clone... 44 0.38
21gb|AC132097.3| Mus musculus BAC clone RP24-395K4 from chromosome... 42 1.5
22dbj|AP006630.1| Lotus japonicus genomic DNA, chromosome 2, clone... 42 1.5
23ref|NM_193202.1| Oryza sativa (japonica cultivar-group), predic... 40 6.0
24gb|AC120791.13| Mus musculus chromosome 7, clone RP23-56I4, comp... 40 6.0
25gb|AC123030.4| Mus musculus BAC clone RP24-573I5 from chromosome... 40 6.0
26emb|BX470263.9| Zebrafish DNA sequence from clone DKEY-15P9 in l... 40 6.0
27emb|BX324162.8| Zebrafish DNA sequence from clone DKEY-95O3 in l... 40 6.0
28dbj|AP003447.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
29emb|AJ329461.1|HSA329461 Homo sapiens genomic sequence surroundi... 40 6.0
30dbj|AK060594.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.0
31emb|AL157871.5|CNS01RG9 Human chromosome 14 DNA sequence BAC R-6... 40 6.0
32emb|AL133523.5|CNS01DVB Human chromosome 14 DNA sequence BAC R-7... 40 6.0

>ref|XM_475270.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1095

 Score =  349 bits (176), Expect = 5e-93
 Identities = 347/404 (85%)
 Strand = Plus / Plus

                                                                        
Query: 1    gaaggtggtgttagccttgactacttacaaggtttgcatgagaaacatgagagctggcta 60
            |||||||||||||  ||||||||||| |||||||||||||||||||| ||||||||| | 
Sbjct: 616  gaaggtggtgttactcttgactacttgcaaggtttgcatgagaaacacgagagctggttg 675

                                                                        
Query: 61   tttccttcgaaaggaggaggcagtggtgtattatcagttagtcagctgcccacgcatatg 120
             ||||||| ||||||||||| | |||||| ||||| || |||||||||||||| ||| ||
Sbjct: 676  cttccttcaaaaggaggaggtactggtgtgttatctgtcagtcagctgcccacacatttg 735

                                                                        
Query: 121  gatggctccttgcctccaggaatacgggatcgtgtcttttacctggaaggagatcacatg 180
            || || ||||||||||||| ||| || ||||||||||||||| |||||||||||||||||
Sbjct: 736  gaaggttccttgcctccagcaattcgagatcgtgtcttttacttggaaggagatcacatg 795

                                                                        
Query: 181  cattctagcatccaaaaggttcctgctctggtcttggattgtgaacctgacattgatttc 240
            || || |||||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 796  cactcaagcatccagaaggtccctgctctggtcttggattgtgaacctgacattgatttc 855

                                                                        
Query: 241  aacagagacatacaagccaaacgaaaatatgcccagcaagttgcggagttctttgaattc 300
            |||| ||| ||| |||| |||||  ||||||| ||||||||||| || |||||| |||| 
Sbjct: 856  aacaaagatatagaagctaaacggcaatatgctcagcaagttgcagaattctttcaattt 915

                                                                        
Query: 301  gtgaatagcaaaaaggaagcgccatccgagcagacaagcactgagaaggaccgcatgaat 360
            ||||| |  || |||||||| ||||| || || ||||||||||| ||| |||| || |||
Sbjct: 916  gtgaagaaaaagaaggaagctccatctgaacaaacaagcactgacaagaaccgtatcaat 975

                                                        
Query: 361  cccaagatcatgttccctaacagaggtggtttgtgggtccctga 404
            ||  |||||||| | ||| ||| ||| || |||||||| |||||
Sbjct: 976  ccacagatcatgcttcctcacaaaggcggattgtgggttcctga 1019



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>dbj|AK071740.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023108J12, full
            insert sequence
          Length = 1741

 Score =  349 bits (176), Expect = 5e-93
 Identities = 347/404 (85%)
 Strand = Plus / Plus

                                                                        
Query: 1    gaaggtggtgttagccttgactacttacaaggtttgcatgagaaacatgagagctggcta 60
            |||||||||||||  ||||||||||| |||||||||||||||||||| ||||||||| | 
Sbjct: 952  gaaggtggtgttactcttgactacttgcaaggtttgcatgagaaacacgagagctggttg 1011

                                                                        
Query: 61   tttccttcgaaaggaggaggcagtggtgtattatcagttagtcagctgcccacgcatatg 120
             ||||||| ||||||||||| | |||||| ||||| || |||||||||||||| ||| ||
Sbjct: 1012 cttccttcaaaaggaggaggtactggtgtgttatctgtcagtcagctgcccacacatttg 1071

                                                                        
Query: 121  gatggctccttgcctccaggaatacgggatcgtgtcttttacctggaaggagatcacatg 180
            || || ||||||||||||| ||| || ||||||||||||||| |||||||||||||||||
Sbjct: 1072 gaaggttccttgcctccagcaattcgagatcgtgtcttttacttggaaggagatcacatg 1131

                                                                        
Query: 181  cattctagcatccaaaaggttcctgctctggtcttggattgtgaacctgacattgatttc 240
            || || |||||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 cactcaagcatccagaaggtccctgctctggtcttggattgtgaacctgacattgatttc 1191

                                                                        
Query: 241  aacagagacatacaagccaaacgaaaatatgcccagcaagttgcggagttctttgaattc 300
            |||| ||| ||| |||| |||||  ||||||| ||||||||||| || |||||| |||| 
Sbjct: 1192 aacaaagatatagaagctaaacggcaatatgctcagcaagttgcagaattctttcaattt 1251

                                                                        
Query: 301  gtgaatagcaaaaaggaagcgccatccgagcagacaagcactgagaaggaccgcatgaat 360
            ||||| |  || |||||||| ||||| || || ||||||||||| ||| |||| || |||
Sbjct: 1252 gtgaagaaaaagaaggaagctccatctgaacaaacaagcactgacaagaaccgtatcaat 1311

                                                        
Query: 361  cccaagatcatgttccctaacagaggtggtttgtgggtccctga 404
            ||  |||||||| | ||| ||| ||| || |||||||| |||||
Sbjct: 1312 ccacagatcatgcttcctcacaaaggcggattgtgggttcctga 1355



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>dbj|AK059420.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-D11, full
           insert sequence
          Length = 1235

 Score =  341 bits (172), Expect = 1e-90
 Identities = 346/404 (85%)
 Strand = Plus / Plus

                                                                       
Query: 1   gaaggtggtgttagccttgactacttacaaggtttgcatgagaaacatgagagctggcta 60
           |||||||||||||  ||||||||||| |||||||||||||||||||| ||||||||| | 
Sbjct: 407 gaaggtggtgttactcttgactacttgcaaggtttgcatgagaaacacgagagctggttg 466

                                                                       
Query: 61  tttccttcgaaaggaggaggcagtggtgtattatcagttagtcagctgcccacgcatatg 120
            ||||||| ||||||||||| | |||||| ||||| || |||||||||||||| ||| ||
Sbjct: 467 cttccttcaaaaggaggaggtactggtgtgttatctgtcagtcagctgcccacacatttg 526

                                                                       
Query: 121 gatggctccttgcctccaggaatacgggatcgtgtcttttacctggaaggagatcacatg 180
           || || ||||||| ||||| ||| || ||||||||||||||| |||||||||||||||||
Sbjct: 527 gaaggttccttgcttccagcaattcgagatcgtgtcttttacttggaaggagatcacatg 586

                                                                       
Query: 181 cattctagcatccaaaaggttcctgctctggtcttggattgtgaacctgacattgatttc 240
           || || |||||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 587 cactcaagcatccagaaggtccctgctctggtcttggattgtgaacctgacattgatttc 646

                                                                       
Query: 241 aacagagacatacaagccaaacgaaaatatgcccagcaagttgcggagttctttgaattc 300
           |||| ||| ||| |||| |||||  ||||||| ||||||||||| || |||||| |||| 
Sbjct: 647 aacaaagatatagaagctaaacggcaatatgctcagcaagttgcagaattctttcaattt 706

                                                                       
Query: 301 gtgaatagcaaaaaggaagcgccatccgagcagacaagcactgagaaggaccgcatgaat 360
           ||||| |  || |||||||| ||||| || || ||||||||||| ||| |||| || |||
Sbjct: 707 gtgaagaaaaagaaggaagctccatctgaacaaacaagcactgacaagaaccgtatcaat 766

                                                       
Query: 361 cccaagatcatgttccctaacagaggtggtttgtgggtccctga 404
           ||  |||||||| | ||| ||| ||| || |||||||| |||||
Sbjct: 767 ccacagatcatgcttcctcacaaaggcggattgtgggttcctga 810



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>gb|AC130600.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0048I21, complete sequence
          Length = 137650

 Score =  206 bits (104), Expect = 4e-50
 Identities = 176/200 (88%)
 Strand = Plus / Plus

                                                                         
Query: 1     gaaggtggtgttagccttgactacttacaaggtttgcatgagaaacatgagagctggcta 60
             |||||||||||||  ||||||||||| |||||||||||||||||||| ||||||||| | 
Sbjct: 98773 gaaggtggtgttactcttgactacttgcaaggtttgcatgagaaacacgagagctggttg 98832

                                                                         
Query: 61    tttccttcgaaaggaggaggcagtggtgtattatcagttagtcagctgcccacgcatatg 120
              ||||||| ||||||||||| | |||||| ||||| || |||||||||||||| ||| ||
Sbjct: 98833 cttccttcaaaaggaggaggtactggtgtgttatctgtcagtcagctgcccacacatttg 98892

                                                                         
Query: 121   gatggctccttgcctccaggaatacgggatcgtgtcttttacctggaaggagatcacatg 180
             || || ||||||||||||| ||| || ||||||||||||||| |||||||||||||||||
Sbjct: 98893 gaaggttccttgcctccagcaattcgagatcgtgtcttttacttggaaggagatcacatg 98952

                                 
Query: 181   cattctagcatccaaaaggt 200
             || || |||||||| |||||
Sbjct: 98953 cactcaagcatccagaaggt 98972



 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 62/67 (92%)
 Strand = Plus / Plus

                                                                         
Query: 197   aggttcctgctctggtcttggattgtgaacctgacattgatttcaacagagacatacaag 256
             |||| ||||||||||||||||||||||||||||||||||||||||||| ||| ||| |||
Sbjct: 99052 aggtccctgctctggtcttggattgtgaacctgacattgatttcaacaaagatatagaag 99111

                    
Query: 257   ccaaacg 263
             | |||||
Sbjct: 99112 ctaaacg 99118



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 112/138 (81%)
 Strand = Plus / Plus

                                                                         
Query: 267   atatgcccagcaagttgcggagttctttgaattcgtgaatagcaaaaaggaagcgccatc 326
             |||||| ||||||||||| || |||||| |||| ||||| |  || |||||||| |||||
Sbjct: 99368 atatgctcagcaagttgcagaattctttcaatttgtgaagaaaaagaaggaagctccatc 99427

                                                                         
Query: 327   cgagcagacaagcactgagaaggaccgcatgaatcccaagatcatgttccctaacagagg 386
              || || ||||||||||| ||| |||| || |||||  |||||||| | ||| ||| |||
Sbjct: 99428 tgaacaaacaagcactgacaagaaccgtatcaatccacagatcatgcttcctcacaaagg 99487

                               
Query: 387   tggtttgtgggtccctga 404
              || |||||||| |||||
Sbjct: 99488 cggattgtgggttcctga 99505



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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  206 bits (104), Expect = 4e-50
 Identities = 176/200 (88%)
 Strand = Plus / Plus

                                                                            
Query: 1        gaaggtggtgttagccttgactacttacaaggtttgcatgagaaacatgagagctggcta 60
                |||||||||||||  ||||||||||| |||||||||||||||||||| ||||||||| | 
Sbjct: 20971995 gaaggtggtgttactcttgactacttgcaaggtttgcatgagaaacacgagagctggttg 20972054

                                                                            
Query: 61       tttccttcgaaaggaggaggcagtggtgtattatcagttagtcagctgcccacgcatatg 120
                 ||||||| ||||||||||| | |||||| ||||| || |||||||||||||| ||| ||
Sbjct: 20972055 cttccttcaaaaggaggaggtactggtgtgttatctgtcagtcagctgcccacacatttg 20972114

                                                                            
Query: 121      gatggctccttgcctccaggaatacgggatcgtgtcttttacctggaaggagatcacatg 180
                || || ||||||||||||| ||| || ||||||||||||||| |||||||||||||||||
Sbjct: 20972115 gaaggttccttgcctccagcaattcgagatcgtgtcttttacttggaaggagatcacatg 20972174

                                    
Query: 181      cattctagcatccaaaaggt 200
                || || |||||||| |||||
Sbjct: 20972175 cactcaagcatccagaaggt 20972194



 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 62/67 (92%)
 Strand = Plus / Plus

                                                                            
Query: 197      aggttcctgctctggtcttggattgtgaacctgacattgatttcaacagagacatacaag 256
                |||| ||||||||||||||||||||||||||||||||||||||||||| ||| ||| |||
Sbjct: 20972274 aggtccctgctctggtcttggattgtgaacctgacattgatttcaacaaagatatagaag 20972333

                       
Query: 257      ccaaacg 263
                | |||||
Sbjct: 20972334 ctaaacg 20972340



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 112/138 (81%)
 Strand = Plus / Plus

                                                                            
Query: 267      atatgcccagcaagttgcggagttctttgaattcgtgaatagcaaaaaggaagcgccatc 326
                |||||| ||||||||||| || |||||| |||| ||||| |  || |||||||| |||||
Sbjct: 20972590 atatgctcagcaagttgcagaattctttcaatttgtgaagaaaaagaaggaagctccatc 20972649

                                                                            
Query: 327      cgagcagacaagcactgagaaggaccgcatgaatcccaagatcatgttccctaacagagg 386
                 || || ||||||||||| ||| |||| || |||||  |||||||| | ||| ||| |||
Sbjct: 20972650 tgaacaaacaagcactgacaagaaccgtatcaatccacagatcatgcttcctcacaaagg 20972709

                                  
Query: 387      tggtttgtgggtccctga 404
                 || |||||||| |||||
Sbjct: 20972710 cggattgtgggttcctga 20972727



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>dbj|AK105804.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-B04, full
            insert sequence
          Length = 1783

 Score =  167 bits (84), Expect = 4e-38
 Identities = 243/296 (82%)
 Strand = Plus / Plus

                                                                        
Query: 4    ggtggtgttagccttgactacttacaaggtttgcatgagaaacatgagagctggctattt 63
            ||||||||||  ||||| ||| | | ||||||||||||||||||||||||||||||  ||
Sbjct: 1056 ggtggtgttactcttgattaccttcgaggtttgcatgagaaacatgagagctggctgctt 1115

                                                                        
Query: 64   ccttcgaaaggaggaggcagtggtgtattatcagttagtcagctgcccacgcatatggat 123
            ||||| ||||||  |||   |||||||||||| || |||||  | ||    |||||||| 
Sbjct: 1116 ccttccaaaggacaaggtcctggtgtattatcggtcagtcaagttccagtccatatggag 1175

                                                                        
Query: 124  ggctccttgcctccaggaatacgggatcgtgtcttttacctggaaggagatcacatgcat 183
            ||||| |||||||| |  ||| | || || || || ||| | ||||||||||| ||||||
Sbjct: 1176 ggctctttgcctccggatataagagaacgagtattctacttagaaggagatcatatgcat 1235

                                                                        
Query: 184  tctagcatccaaaaggttcctgctctggtcttggattgtgaacctgacattgatttcaac 243
            ||||| ||||| |||||||||||||||||| | || || |||| |||||||||||| |||
Sbjct: 1236 tctagtatccagaaggttcctgctctggtcctcgactgcgaacatgacattgattttaac 1295

                                                                    
Query: 244  agagacatacaagccaaacgaaaatatgcccagcaagttgcggagttctttgaatt 299
            |  || ||  ||||||||||| |||||||||  |||||||||||||||||||||||
Sbjct: 1296 aaggatattgaagccaaacgacaatatgcccgacaagttgcggagttctttgaatt 1351



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>ref|NM_190823.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 903

 Score =  121 bits (61), Expect = 2e-24
 Identities = 196/241 (81%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggtggtgttagccttgactacttacaaggtttgcatgagaaacatgagagctggctattt 63
           ||||||||||  ||||| ||| | | ||||||||||||||||||||||||||||||  ||
Sbjct: 637 ggtggtgttactcttgattaccttcgaggtttgcatgagaaacatgagagctggctgctt 696

                                                                       
Query: 64  ccttcgaaaggaggaggcagtggtgtattatcagttagtcagctgcccacgcatatggat 123
           ||||| ||||||  |||   |||||||||||| || |||||  | ||    |||||||| 
Sbjct: 697 ccttccaaaggacaaggtcctggtgtattatcggtcagtcaagttccagtccatatggag 756

                                                                       
Query: 124 ggctccttgcctccaggaatacgggatcgtgtcttttacctggaaggagatcacatgcat 183
           ||||| |||||||| |  ||| | || || || || ||| | ||||||||||| ||||||
Sbjct: 757 ggctctttgcctccggatataagagaacgagtattctacttagaaggagatcatatgcat 816

                                                                       
Query: 184 tctagcatccaaaaggttcctgctctggtcttggattgtgaacctgacattgatttcaac 243
           ||||| ||||| |||||||||||||||||| | || || |||| |||||||||||| |||
Sbjct: 817 tctagtatccagaaggttcctgctctggtcctcgactgcgaacatgacattgattttaac 876

            
Query: 244 a 244
           |
Sbjct: 877 a 877



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>dbj|AK101275.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033033B15, full
            insert sequence
          Length = 3103

 Score =  121 bits (61), Expect = 2e-24
 Identities = 211/261 (80%)
 Strand = Plus / Plus

                                                                        
Query: 4    ggtggtgttagccttgactacttacaaggtttgcatgagaaacatgagagctggctattt 63
            ||||||||||  ||||| ||| | | ||||||||||||||||||||||||||||||  ||
Sbjct: 1208 ggtggtgttactcttgattaccttcgaggtttgcatgagaaacatgagagctggctgctt 1267

                                                                        
Query: 64   ccttcgaaaggaggaggcagtggtgtattatcagttagtcagctgcccacgcatatggat 123
            ||||| ||||||  |||   |||||||||||| || |||||  | ||    |||||||| 
Sbjct: 1268 ccttccaaaggacaaggtcctggtgtattatcggtcagtcaagttccagtccatatggag 1327

                                                                        
Query: 124  ggctccttgcctccaggaatacgggatcgtgtcttttacctggaaggagatcacatgcat 183
            ||||| |||||||| |  ||| | || || || || ||| | ||||||||||| ||||||
Sbjct: 1328 ggctctttgcctccggatataagagaacgagtattctacttagaaggagatcatatgcat 1387

                                                                        
Query: 184  tctagcatccaaaaggttcctgctctggtcttggattgtgaacctgacattgatttcaac 243
            ||||| ||||| |||||||||||||||||| | || || |||| |||||||||||| |||
Sbjct: 1388 tctagtatccagaaggttcctgctctggtcctcgactgcgaacatgacattgattttaac 1447

                                 
Query: 244  agagacatacaagccaaacga 264
            |  || ||  |||||||||||
Sbjct: 1448 aaggatattgaagccaaacga 1468



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                             
Query: 267  atatgcccagcaagttgcggagttctttgaatt 299
            ||||||||  |||||||||||||||||||||||
Sbjct: 2639 atatgcccgacaagttgcggagttctttgaatt 2671



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>ref|NM_105862.3| Arabidopsis thaliana ATP binding / phosphotransferase, alcohol group
            as acceptor AT1G72040 mRNA, complete cds
          Length = 2099

 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 69/77 (89%)
 Strand = Plus / Plus

                                                                        
Query: 151  cgtgtcttttacctggaaggagatcacatgcattctagcatccaaaaggttcctgctctg 210
            |||||||||||| |||||||| |||| ||||||||||| ||||| ||||| |||||||||
Sbjct: 1520 cgtgtcttttacttggaaggaaatcatatgcattctagtatccagaaggtccctgctctg 1579

                             
Query: 211  gtcttggattgtgaacc 227
            || ||||| ||||||||
Sbjct: 1580 gttttggactgtgaacc 1596



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>gb|BT022033.1| Arabidopsis thaliana At1g72040 gene, complete cds
          Length = 1911

 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 69/77 (89%)
 Strand = Plus / Plus

                                                                        
Query: 151  cgtgtcttttacctggaaggagatcacatgcattctagcatccaaaaggttcctgctctg 210
            |||||||||||| |||||||| |||| ||||||||||| ||||| ||||| |||||||||
Sbjct: 1465 cgtgtcttttacttggaaggaaatcatatgcattctagtatccagaaggtccctgctctg 1524

                             
Query: 211  gtcttggattgtgaacc 227
            || ||||| ||||||||
Sbjct: 1525 gttttggactgtgaacc 1541



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>gb|AY089150.1| Arabidopsis thaliana clone 3878 mRNA, complete sequence
          Length = 883

 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 69/77 (89%)
 Strand = Plus / Plus

                                                                       
Query: 151 cgtgtcttttacctggaaggagatcacatgcattctagcatccaaaaggttcctgctctg 210
           |||||||||||| |||||||| |||| ||||||||||| ||||| ||||| |||||||||
Sbjct: 304 cgtgtcttttacttggaaggaaatcatatgcattctagtatccagaaggtccctgctctg 363

                            
Query: 211 gtcttggattgtgaacc 227
           || ||||| ||||||||
Sbjct: 364 gttttggactgtgaacc 380



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>gb|AY459335.1| Oryza sativa (japonica cultivar-group) clone CL026180.5 R2R3-MYB gene
            region
          Length = 24910

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 158/197 (80%)
 Strand = Plus / Minus

                                                                        
Query: 4    ggtggtgttagccttgactacttacaaggtttgcatgagaaacatgagagctggctattt 63
            ||||||||||  ||||| ||| | | ||||||||||||||||||||||||||||||  ||
Sbjct: 5462 ggtggtgttactcttgattaccttcgaggtttgcatgagaaacatgagagctggctgctt 5403

                                                                        
Query: 64   ccttcgaaaggaggaggcagtggtgtattatcagttagtcagctgcccacgcatatggat 123
            ||||| ||||||  |||   |||||||||||| || |||||  | ||    |||||||| 
Sbjct: 5402 ccttccaaaggacaaggtcctggtgtattatcggtcagtcaagttccagtccatatggag 5343

                                                                        
Query: 124  ggctccttgcctccaggaatacgggatcgtgtcttttacctggaaggagatcacatgcat 183
            ||||| |||||||| |  ||| | || || || || ||| | ||||||||||| ||||||
Sbjct: 5342 ggctctttgcctccggatataagagaacgagtattctacttagaaggagatcatatgcat 5283

                             
Query: 184  tctagcatccaaaaggt 200
            ||||| ||||| |||||
Sbjct: 5282 tctagtatccagaaggt 5266



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                             
Query: 267  atatgcccagcaagttgcggagttctttgaatt 299
            ||||||||  |||||||||||||||||||||||
Sbjct: 3956 atatgcccgacaagttgcggagttctttgaatt 3924



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 57/68 (83%)
 Strand = Plus / Minus

                                                                        
Query: 197  aggttcctgctctggtcttggattgtgaacctgacattgatttcaacagagacatacaag 256
            ||||||||||||||||| | || || |||| |||||||||||| ||||  || ||  |||
Sbjct: 5194 aggttcctgctctggtcctcgactgcgaacatgacattgattttaacaaggatattgaag 5135

                    
Query: 257  ccaaacga 264
            ||||||||
Sbjct: 5134 ccaaacga 5127



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 158/197 (80%)
 Strand = Plus / Minus

                                                                            
Query: 4        ggtggtgttagccttgactacttacaaggtttgcatgagaaacatgagagctggctattt 63
                ||||||||||  ||||| ||| | | ||||||||||||||||||||||||||||||  ||
Sbjct: 37910003 ggtggtgttactcttgattaccttcgaggtttgcatgagaaacatgagagctggctgctt 37909944

                                                                            
Query: 64       ccttcgaaaggaggaggcagtggtgtattatcagttagtcagctgcccacgcatatggat 123
                ||||| ||||||  |||   |||||||||||| || |||||  | ||    |||||||| 
Sbjct: 37909943 ccttccaaaggacaaggtcctggtgtattatcggtcagtcaagttccagtccatatggag 37909884

                                                                            
Query: 124      ggctccttgcctccaggaatacgggatcgtgtcttttacctggaaggagatcacatgcat 183
                ||||| |||||||| |  ||| | || || || || ||| | ||||||||||| ||||||
Sbjct: 37909883 ggctctttgcctccggatataagagaacgagtattctacttagaaggagatcatatgcat 37909824

                                 
Query: 184      tctagcatccaaaaggt 200
                ||||| ||||| |||||
Sbjct: 37909823 tctagtatccagaaggt 37909807



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                                 
Query: 267      atatgcccagcaagttgcggagttctttgaatt 299
                ||||||||  |||||||||||||||||||||||
Sbjct: 37908497 atatgcccgacaagttgcggagttctttgaatt 37908465



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 57/68 (83%)
 Strand = Plus / Minus

                                                                            
Query: 197      aggttcctgctctggtcttggattgtgaacctgacattgatttcaacagagacatacaag 256
                ||||||||||||||||| | || || |||| |||||||||||| ||||  || ||  |||
Sbjct: 37909735 aggttcctgctctggtcctcgactgcgaacatgacattgattttaacaaggatattgaag 37909676

                        
Query: 257      ccaaacga 264
                ||||||||
Sbjct: 37909675 ccaaacga 37909668



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 222      tgaacctgacattgatttca 241
                ||||||||||||||||||||
Sbjct: 19249756 tgaacctgacattgatttca 19249775



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>dbj|AP004669.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0491F11
          Length = 152274

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 158/197 (80%)
 Strand = Plus / Minus

                                                                          
Query: 4      ggtggtgttagccttgactacttacaaggtttgcatgagaaacatgagagctggctattt 63
              ||||||||||  ||||| ||| | | ||||||||||||||||||||||||||||||  ||
Sbjct: 131359 ggtggtgttactcttgattaccttcgaggtttgcatgagaaacatgagagctggctgctt 131300

                                                                          
Query: 64     ccttcgaaaggaggaggcagtggtgtattatcagttagtcagctgcccacgcatatggat 123
              ||||| ||||||  |||   |||||||||||| || |||||  | ||    |||||||| 
Sbjct: 131299 ccttccaaaggacaaggtcctggtgtattatcggtcagtcaagttccagtccatatggag 131240

                                                                          
Query: 124    ggctccttgcctccaggaatacgggatcgtgtcttttacctggaaggagatcacatgcat 183
              ||||| |||||||| |  ||| | || || || || ||| | ||||||||||| ||||||
Sbjct: 131239 ggctctttgcctccggatataagagaacgagtattctacttagaaggagatcatatgcat 131180

                               
Query: 184    tctagcatccaaaaggt 200
              ||||| ||||| |||||
Sbjct: 131179 tctagtatccagaaggt 131163



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                               
Query: 267    atatgcccagcaagttgcggagttctttgaatt 299
              ||||||||  |||||||||||||||||||||||
Sbjct: 129853 atatgcccgacaagttgcggagttctttgaatt 129821



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 57/68 (83%)
 Strand = Plus / Minus

                                                                          
Query: 197    aggttcctgctctggtcttggattgtgaacctgacattgatttcaacagagacatacaag 256
              ||||||||||||||||| | || || |||| |||||||||||| ||||  || ||  |||
Sbjct: 131091 aggttcctgctctggtcctcgactgcgaacatgacattgattttaacaaggatattgaag 131032

                      
Query: 257    ccaaacga 264
              ||||||||
Sbjct: 131031 ccaaacga 131024



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>dbj|AP003922.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0648C09
          Length = 107522

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 158/197 (80%)
 Strand = Plus / Minus

                                                                        
Query: 4    ggtggtgttagccttgactacttacaaggtttgcatgagaaacatgagagctggctattt 63
            ||||||||||  ||||| ||| | | ||||||||||||||||||||||||||||||  ||
Sbjct: 6279 ggtggtgttactcttgattaccttcgaggtttgcatgagaaacatgagagctggctgctt 6220

                                                                        
Query: 64   ccttcgaaaggaggaggcagtggtgtattatcagttagtcagctgcccacgcatatggat 123
            ||||| ||||||  |||   |||||||||||| || |||||  | ||    |||||||| 
Sbjct: 6219 ccttccaaaggacaaggtcctggtgtattatcggtcagtcaagttccagtccatatggag 6160

                                                                        
Query: 124  ggctccttgcctccaggaatacgggatcgtgtcttttacctggaaggagatcacatgcat 183
            ||||| |||||||| |  ||| | || || || || ||| | ||||||||||| ||||||
Sbjct: 6159 ggctctttgcctccggatataagagaacgagtattctacttagaaggagatcatatgcat 6100

                             
Query: 184  tctagcatccaaaaggt 200
            ||||| ||||| |||||
Sbjct: 6099 tctagtatccagaaggt 6083



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                             
Query: 267  atatgcccagcaagttgcggagttctttgaatt 299
            ||||||||  |||||||||||||||||||||||
Sbjct: 4773 atatgcccgacaagttgcggagttctttgaatt 4741



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 57/68 (83%)
 Strand = Plus / Minus

                                                                        
Query: 197  aggttcctgctctggtcttggattgtgaacctgacattgatttcaacagagacatacaag 256
            ||||||||||||||||| | || || |||| |||||||||||| ||||  || ||  |||
Sbjct: 6011 aggttcctgctctggtcctcgactgcgaacatgacattgattttaacaaggatattgaag 5952

                    
Query: 257  ccaaacga 264
            ||||||||
Sbjct: 5951 ccaaacga 5944



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>gb|AC069273.4|AC069273 Arabidopsis thaliana chromosome 1 BAC F28P5 genomic sequence, complete
             sequence
          Length = 38629

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                               
Query: 151   cgtgtcttttacctggaaggagatcacatgcattctagcatccaaaaggt 200
             |||||||||||| |||||||| |||| ||||||||||| ||||| |||||
Sbjct: 28765 cgtgtcttttacttggaaggaaatcatatgcattctagtatccagaaggt 28814



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>dbj|AK131259.1| Homo sapiens cDNA FLJ16191 fis, clone BRTHA2013610, moderately
            similar to Arabidopsis thaliana deoxyguanosine kinase
            -related (At1g72040) mRNA
          Length = 1807

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 71/85 (83%)
 Strand = Plus / Plus

                                                                        
Query: 157  ttttacctggaaggagatcacatgcattctagcatccaaaaggttcctgctctggtcttg 216
            ||||| ||||| || | |||||||||||| ||||| || |||||||||||| ||||  ||
Sbjct: 1295 ttttatctggagggtggtcacatgcattcaagcattcagaaggttcctgctttggttctg 1354

                                     
Query: 217  gattgtgaacctgacattgatttca 241
            || ||||||||  | ||||||||||
Sbjct: 1355 gactgtgaacccaatattgatttca 1379



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>gb|AF514776.1| Lycopersicon esculentum dCK/dGK-like deoxyribonucleoside kinase
           mRNA, complete cds
          Length = 1098

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 60/71 (84%)
 Strand = Plus / Plus

                                                                       
Query: 136 ccaggaatacgggatcgtgtcttttacctggaaggagatcacatgcattctagcatccaa 195
           |||| |||| |||||||||| ||||| ||||||||  ||||||||||  | || || |||
Sbjct: 763 ccagaaataagggatcgtgttttttatctggaaggcaatcacatgcacccgagtattcaa 822

                      
Query: 196 aaggttcctgc 206
           |||||||||||
Sbjct: 823 aaggttcctgc 833



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>gb|AC137871.18| Mus musculus chromosome 15, clone RP23-41B9, complete sequence
          Length = 223529

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 332    agacaagcactgagaaggaccg 353
              ||||||||||||||||||||||
Sbjct: 164370 agacaagcactgagaaggaccg 164349



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>dbj|AP006693.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT35C17, TM0399,
             complete sequence
          Length = 94919

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 209   tggtcttggattgtgaacctga 230
             ||||||||||||||||||||||
Sbjct: 46094 tggtcttggattgtgaacctga 46115



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>gb|AC132097.3| Mus musculus BAC clone RP24-395K4 from chromosome 12, complete sequence
          Length = 149176

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 182   attctagcatccaaaaggttc 202
             |||||||||||||||||||||
Sbjct: 55864 attctagcatccaaaaggttc 55884



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>dbj|AP006630.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT12F12, TM0028a,
             complete sequence
          Length = 60126

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 187   agcatccaaaaggttcctgct 207
             |||||||||||||||||||||
Sbjct: 48504 agcatccaaaaggttcctgct 48524



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>ref|NM_193202.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2055

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 222  tgaacctgacattgatttca 241
            ||||||||||||||||||||
Sbjct: 1377 tgaacctgacattgatttca 1396



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>gb|AC120791.13| Mus musculus chromosome 7, clone RP23-56I4, complete sequence
          Length = 246249

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 55     tggctatttccttcgaaaggagga 78
              ||||||||||||| ||||||||||
Sbjct: 238881 tggctatttccttagaaaggagga 238858



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>gb|AC123030.4| Mus musculus BAC clone RP24-573I5 from chromosome 7, complete sequence
          Length = 173971

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 55    tggctatttccttcgaaaggagga 78
             ||||||||||||| ||||||||||
Sbjct: 50975 tggctatttccttagaaaggagga 50952



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>emb|BX470263.9| Zebrafish DNA sequence from clone DKEY-15P9 in linkage group 9,
             complete sequence
          Length = 176022

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 75    aggaggcagtggtgtattat 94
             ||||||||||||||||||||
Sbjct: 53317 aggaggcagtggtgtattat 53298



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>emb|BX324162.8| Zebrafish DNA sequence from clone DKEY-95O3 in linkage group 15,
            complete sequence
          Length = 155540

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 199  gttcctgctctggtcttggattgt 222
            |||||||||||||||||| |||||
Sbjct: 1522 gttcctgctctggtcttgaattgt 1545



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>dbj|AP003447.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OJ1619_F12
          Length = 133028

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 222   tgaacctgacattgatttca 241
             ||||||||||||||||||||
Sbjct: 69377 tgaacctgacattgatttca 69396



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>emb|AJ329461.1|HSA329461 Homo sapiens genomic sequence surrounding NotI site, clone
           NR5-GC23C
          Length = 680

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 69  gaaaggaggaggcagtggtg 88
           ||||||||||||||||||||
Sbjct: 321 gaaaggaggaggcagtggtg 340



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>dbj|AK060594.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-F04, full
           insert sequence
          Length = 1112

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 222 tgaacctgacattgatttca 241
           ||||||||||||||||||||
Sbjct: 284 tgaacctgacattgatttca 303



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>emb|AL157871.5|CNS01RG9 Human chromosome 14 DNA sequence BAC R-638I2 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 180688

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 237   tttcaacagagacatacaag 256
             ||||||||||||||||||||
Sbjct: 31770 tttcaacagagacatacaag 31789



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>emb|AL133523.5|CNS01DVB Human chromosome 14 DNA sequence BAC R-775G15 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 173039

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 237    tttcaacagagacatacaag 256
              ||||||||||||||||||||
Sbjct: 161324 tttcaacagagacatacaag 161343


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,576,825
Number of Sequences: 3902068
Number of extensions: 3576825
Number of successful extensions: 59740
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 59617
Number of HSP's gapped (non-prelim): 124
length of query: 446
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 424
effective length of database: 17,147,199,772
effective search space: 7270412703328
effective search space used: 7270412703328
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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