ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags10g06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1YQK7_CAEEL (Q09289) Hypothetical protein C56G2.7 44 5e-04
2YL61_SCHPO (Q8TFG9) Hypothetical serine/threonine-rich protein P... 33 0.69
3RTEL1_HUMAN (Q9NZ71) Regulator of telomere elongation helicase 1... 32 2.0
4ADCY6_MOUSE (Q01341) Adenylate cyclase type 6 (EC 4.6.1.1) (Aden... 31 2.6
5CYSP4_DICDI (P54639) Cysteine proteinase 4 precursor (EC 3.4.22.-) 30 5.8
6PPZ_SCHPO (P78968) Serine/threonine-protein phosphatase PP-Z (EC... 30 5.8
7ADCY6_HUMAN (O43306) Adenylate cyclase type 6 (EC 4.6.1.1) (Aden... 30 5.8
8CT102_HUMAN (Q96N03) Protein C20orf102 precursor 30 7.6
9CT102_MOUSE (Q6PDS0) Protein C20orf102 homolog precursor 30 7.6
10YGGC_ECOLI (P11664) Hypothetical protein yggC 30 7.6
11FCN1_MOUSE (O70165) Ficolin-1 precursor (Collagen/fibrinogen dom... 29 10.0

>YQK7_CAEEL (Q09289) Hypothetical protein C56G2.7|
          Length = 374

 Score = 43.5 bits (101), Expect = 5e-04
 Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 2/92 (2%)
 Frame = +3

Query: 327 ASHLPEGSWTAGDILELLQSPPLRQQLDAFTHVLQTGQID--LAQFGVDPSKYKFTVASF 500
           A HLP     A ++ E +++P  RQ  D   H LQTGQ+   +AQFG+D +         
Sbjct: 269 APHLPTSDDPARELSETVRTPQFRQAADTLGHALQTGQLGPVVAQFGMDEATVGSANQGD 328

Query: 501 LEALEDSVANACTDGGNDSKTKKDGGNDPMDE 596
           +     ++  A  +GG D+   ++  +D   E
Sbjct: 329 IRGFAANLTKA--EGGEDAAKTQNSDDDATRE 358



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>YL61_SCHPO (Q8TFG9) Hypothetical serine/threonine-rich protein PB15E9.01c|
           precursor
          Length = 943

 Score = 33.1 bits (74), Expect = 0.69
 Identities = 42/163 (25%), Positives = 69/163 (42%), Gaps = 1/163 (0%)
 Frame = -3

Query: 625 TALGAPRNQLSSMGSFPPSFLVFESLPPSVQAFATESSNASRNEATVNLYLLGSTPN*AR 446
           T+  A  + L+S  S   S L   S+  S  A ++ +S++  + +T +  L  S+ N   
Sbjct: 110 TSSSATSSSLAS-SSTTSSSLASSSITSSSLASSSITSSSLASSSTTSSSLASSSTNSTT 168

Query: 445 SIWPVCS-T*VKASSCCRKGGLCSSSRISPAVQEPSGRCDANCSMGKVSISGNIKSGFKM 269
           S  P  S T    SS        SSS  S ++   +     + S+   + S +  S    
Sbjct: 169 SATPTSSATSSSLSSTAASNSATSSSLASSSLNSTTSATATSSSLSSTAASNSATSSSLA 228

Query: 268 SPSLNPASGSAVASDGCIELNIL*RSASRTGPAAEVTSPAISA 140
           S SLN  + SA A+   I   +   S+S    ++  T+ A SA
Sbjct: 229 SSSLNSTT-SATATSSSISSTV---SSSTPLTSSNSTTAATSA 267



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>RTEL1_HUMAN (Q9NZ71) Regulator of telomere elongation helicase 1 (EC 3.6.1.-)|
           (Helicase-like protein NHL)
          Length = 1400

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 16/39 (41%), Positives = 24/39 (61%)
 Frame = +3

Query: 141 ADMAGEVTSAAGPVRLADLQRILSSIQPSDATADPDAGL 257
           A  AG  T+ AG  +LAD+ +I+ S+ PS+ +    AGL
Sbjct: 377 AGRAGVFTNTAGLQKLADIIQIVFSVDPSEGSPGSPAGL 415



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>ADCY6_MOUSE (Q01341) Adenylate cyclase type 6 (EC 4.6.1.1) (Adenylate cyclase|
           type VI) (ATP pyrophosphate-lyase 6) (Ca(2+)-inhibitable
           adenylyl cyclase)
          Length = 1165

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
 Frame = -2

Query: 608 PQSTLVHGIISTIFLGL*IIASIC-TSVCHRVFQCLQERSNCEFIFTRVHSKLSKIYLAS 432
           P STL+ GI + IFL L +   IC    C   F    +R +   + +RVHS    I+   
Sbjct: 689 PYSTLILGIYAAIFLLLLVTVLICAVCSCGSFFPKALQRLSRNIVRSRVHSTAVGIFSVL 748

Query: 431 LQHMS 417
           L  +S
Sbjct: 749 LVFIS 753



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>CYSP4_DICDI (P54639) Cysteine proteinase 4 precursor (EC 3.4.22.-)|
          Length = 442

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
 Frame = -3

Query: 415 KASSCCRKGGLCSSSRIS-PAVQEPSGRCDANCSMGKVSISGNIKSGFKMSPSLNPASGS 239
           K+SS    GG  SSS  S  A    SG+  ++ S GK S + +  SG +        SG 
Sbjct: 298 KSSSSSSTGGKTSSSSSSGKASSSSSGKASSSSSSGKTSSAASSTSGSQSGSQSGSQSGQ 357

Query: 238 AVAS 227
           +  S
Sbjct: 358 STGS 361



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>PPZ_SCHPO (P78968) Serine/threonine-protein phosphatase PP-Z (EC 3.1.3.16)|
          Length = 515

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 25/91 (27%), Positives = 33/91 (36%), Gaps = 3/91 (3%)
 Frame = -1

Query: 585 DHFHHLSWSLNHCLHLYKRLPQSLPMPPGTKQL*IYIY*GPLQIEQDLFGQSAAHE*KHP 406
           +H    S    H  H Y   P SLP PP    L           ++D    S +    HP
Sbjct: 45  NHDRRTSTDTTHSRHRYPETPPSLPPPPSPGILATSPAVLQKHQQEDSGNSSQSPTSPHP 104

Query: 405 ---VAVAKEDFAAAQEYHQQSKNPPEDVMPT 322
               A+     AA+Q +H  S +    V PT
Sbjct: 105 SNQPAMLSPSTAASQHHHHHSSSSSYAVSPT 135



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>ADCY6_HUMAN (O43306) Adenylate cyclase type 6 (EC 4.6.1.1) (Adenylate cyclase|
           type VI) (ATP pyrophosphate-lyase 6) (Ca(2+)-inhibitable
           adenylyl cyclase)
          Length = 1168

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
 Frame = -2

Query: 608 PQSTLVHGIISTIFLGL*IIASICTSV-CHRVFQCLQERSNCEFIFTRVHSKLSKIY 441
           P STL+ GI ++IFL L I   IC    C  +F    +R +   + +R HS    I+
Sbjct: 692 PHSTLMLGIYASIFLLLLITVLICAVYSCGSLFPKALQRLSRSIVRSRAHSTAVGIF 748



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>CT102_HUMAN (Q96N03) Protein C20orf102 precursor|
          Length = 204

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 5/46 (10%)
 Frame = -2

Query: 200 LKVSQSYRSSGRSHFTSHISGHALIN*IP-----SSGRDVIISCIF 78
           L++  + R +G + + +H+SGHAL    P      +G DV ++C F
Sbjct: 19  LQLGGATRPAGHAPWDNHVSGHALFTETPHDMTARTGEDVEMACSF 64



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>CT102_MOUSE (Q6PDS0) Protein C20orf102 homolog precursor|
          Length = 220

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 5/46 (10%)
 Frame = -2

Query: 200 LKVSQSYRSSGRSHFTSHISGHALIN*IP-----SSGRDVIISCIF 78
           L++  + R +G + + +H+SGHAL    P      +G DV ++C F
Sbjct: 19  LQLGGATRPAGHAPWDNHVSGHALFTETPHDMTARTGEDVEMACSF 64



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>YGGC_ECOLI (P11664) Hypothetical protein yggC|
          Length = 237

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = -1

Query: 609 PAINSRPWDHFHHL-SWSLNHCLHLYKRLPQSLPMPPGTKQL 487
           PAI + P D FHH  SW   H L  +K  P++  +   T+ L
Sbjct: 74  PAIQTLPMDGFHHYNSWLDAHQLRPFKGAPETFDVAKLTENL 115



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>FCN1_MOUSE (O70165) Ficolin-1 precursor (Collagen/fibrinogen domain-containing|
           protein 1) (Ficolin-A) (Ficolin A) (M-Ficolin)
          Length = 334

 Score = 29.3 bits (64), Expect = 10.0
 Identities = 24/81 (29%), Positives = 31/81 (38%), Gaps = 3/81 (3%)
 Frame = +3

Query: 351 WTAGDILELLQS---PPLRQQLDAFTHVLQTGQIDLAQFGVDPSKYKFTVASFLEALEDS 521
           W   D L LL +     LR  L  F       +    Q   +  KYK T+  FLE    +
Sbjct: 195 WLGNDYLHLLTANGNQELRVDLQDFQGKGSYAKYSSFQVSEEQEKYKLTLGQFLEG---T 251

Query: 522 VANACTDGGNDSKTKKDGGND 584
             ++ T   N S T  D  ND
Sbjct: 252 AGDSLTKHNNMSFTTHDQDND 272


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 92,356,405
Number of Sequences: 219361
Number of extensions: 1874411
Number of successful extensions: 5292
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 5043
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5290
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5767334219
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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