ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags10f09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CLV1_ARATH (Q9SYQ8) Receptor protein kinase CLAVATA1 precursor (... 60 2e-09
2RLK5_ARATH (P47735) Receptor-like protein kinase 5 precursor (EC... 39 0.009
3NAK_ARATH (P43293) Probable serine/threonine-protein kinase NAK ... 34 0.17
4BAK1_ARATH (Q94F62) BRASSINOSTEROID INSENSITIVE 1-associated rec... 33 0.29
5RPK1_IPONI (P93194) Receptor-like protein kinase precursor (EC 2... 33 0.38
6SIRK_ARATH (O64483) Senescence-induced receptor-like serine/thre... 33 0.50
7EXS_ARATH (Q9LYN8) Leucine-rich repeat receptor protein kinase E... 31 1.4
8LYG2_HUMAN (Q86SG7) Lysozyme g-like protein 2 precursor 30 2.5
9SRK6_BRAOE (Q09092) Putative serine/threonine-protein kinase rec... 30 4.2
10PSKR_ARATH (Q9ZVR7) Putative phytosulfokine receptor precursor (... 29 7.2
11ILPR_BRALA (O02466) Insulin-like peptide receptor precursor (EC ... 28 9.4
12DSC1_MOUSE (P55849) Desmocollin-1 precursor 28 9.4
13GSPC_AERHY (P45790) General secretion pathway protein C 28 9.4

>CLV1_ARATH (Q9SYQ8) Receptor protein kinase CLAVATA1 precursor (EC 2.7.11.1)|
          Length = 980

 Score = 60.5 bits (145), Expect = 2e-09
 Identities = 27/54 (50%), Positives = 39/54 (72%)
 Frame = +1

Query: 40   VMKILDPRLSTVPVHEVMHVFYVALLCTEEHSVQRPTMREVVQILSELPKPAAS 201
            V+ I+DPRL+  P+  V+HVF +A++C EE +  RPTMREVV +L+  PK  A+
Sbjct: 923  VVAIVDPRLTGYPLTSVIHVFKIAMMCVEEEAAARPTMREVVHMLTNPPKSVAN 976



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>RLK5_ARATH (P47735) Receptor-like protein kinase 5 precursor (EC 2.7.11.1)|
          Length = 999

 Score = 38.5 bits (88), Expect = 0.009
 Identities = 17/45 (37%), Positives = 28/45 (62%)
 Frame = +1

Query: 49   ILDPRLSTVPVHEVMHVFYVALLCTEEHSVQRPTMREVVQILSEL 183
            ++DP+L      E+  V ++ LLCT    + RP+MR+VV +L E+
Sbjct: 923  VIDPKLDLKFKEEISKVIHIGLLCTSPLPLNRPSMRKVVIMLQEV 967



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>NAK_ARATH (P43293) Probable serine/threonine-protein kinase NAK (EC 2.7.11.1)|
          Length = 389

 Score = 34.3 bits (77), Expect = 0.17
 Identities = 16/53 (30%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
 Frame = +1

Query: 28  SKEQVMKILDPRLS-TVPVHEVMHVFYVALLCTEEHSVQRPTMREVVQILSEL 183
           +K ++++++DPRL     +   + +  +AL C    +  RPTM E+V+ + EL
Sbjct: 301 NKRRLLRVMDPRLQGQYSLTRALKIAVLALDCISIDAKSRPTMNEIVKTMEEL 353



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>BAK1_ARATH (Q94F62) BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1|
           precursor (EC 2.7.11.1) (BRI1-associated receptor kinase
           1) (Somatic embryogenesis receptor-like kinase 3)
          Length = 615

 Score = 33.5 bits (75), Expect = 0.29
 Identities = 19/46 (41%), Positives = 26/46 (56%)
 Frame = +1

Query: 85  EVMHVFYVALLCTEEHSVQRPTMREVVQILSELPKPAASQGDGEEE 222
           EV  +  VALLCT+   ++RP M EVV++L         +GDG  E
Sbjct: 534 EVEQLIQVALLCTQSSPMERPKMSEVVRML---------EGDGLAE 570



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>RPK1_IPONI (P93194) Receptor-like protein kinase precursor (EC 2.7.11.1)|
          Length = 1109

 Score = 33.1 bits (74), Expect = 0.38
 Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 5/52 (9%)
 Frame = +1

Query: 37   QVMKILDPRL-----STVPVHEVMHVFYVALLCTEEHSVQRPTMREVVQILS 177
            ++ KI+DP L      +  + +V     +AL C E+   +RPTMR+VV+ L+
Sbjct: 1042 EIQKIVDPSLLDELIDSSVMEQVTEALSLALRCAEKEVDKRPTMRDVVKQLT 1093



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>SIRK_ARATH (O64483) Senescence-induced receptor-like serine/threonine-protein|
           kinase precursor (FLG22-induced receptor-like kinase 1)
          Length = 876

 Score = 32.7 bits (73), Expect = 0.50
 Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = +1

Query: 49  ILDPRL-STVPVHEVMHVFYVALLCTEEHSVQRPTMREVVQILSEL 183
           I+D RL     V     +  +AL CTE  S QRPTM +VV  L ++
Sbjct: 800 IVDQRLRERYDVGSAWKMSEIALACTEHTSAQRPTMSQVVMELKQI 845



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>EXS_ARATH (Q9LYN8) Leucine-rich repeat receptor protein kinase EXS precursor|
            (EC 2.7.11.1) (Extra sporogenous cells protein) (EXCESS
            MICROSPOROCYTES1 protein)
          Length = 1192

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 14/50 (28%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
 Frame = +1

Query: 37   QVMKILDPRLSTVPV-HEVMHVFYVALLCTEEHSVQRPTMREVVQILSEL 183
            + + ++DP L +V + +  + +  +A+LC  E   +RP M +V++ L E+
Sbjct: 1143 KAVDVIDPLLVSVALKNSQLRLLQIAMLCLAETPAKRPNMLDVLKALKEI 1192



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>LYG2_HUMAN (Q86SG7) Lysozyme g-like protein 2 precursor|
          Length = 212

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
 Frame = -2

Query: 455 LGYVQHSNKFFHSTNPRFRPRLAPACLDDQMLMRSGGGD-DSELVCCC 315
           +G  + S  F HS  P   PRL   C  D M M++ G   D+  V  C
Sbjct: 14  IGTSRGSYPFSHSMKPHLHPRLYHGCYGDIMTMKTSGATCDANSVMNC 61



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>SRK6_BRAOE (Q09092) Putative serine/threonine-protein kinase receptor|
           precursor (EC 2.7.11.1) (S-receptor kinase) (SRK)
          Length = 849

 Score = 29.6 bits (65), Expect = 4.2
 Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 12/64 (18%)
 Frame = +1

Query: 37  QVMKILDP----RLSTVPV----HEVMHVFYVALLCTEEHSVQRPTMREVVQIL----SE 180
           + ++I+DP     LS+ P      EV+    + LLC +E +  RP M  VV +     +E
Sbjct: 753 RALEIVDPVIVDSLSSQPSIFQPQEVLKCIQIGLLCVQELAEHRPAMSSVVWMFGSEATE 812

Query: 181 LPKP 192
           +P+P
Sbjct: 813 IPQP 816



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>PSKR_ARATH (Q9ZVR7) Putative phytosulfokine receptor precursor (EC 2.7.11.1)|
            (Phytosulfokine LRR receptor kinase)
          Length = 1008

 Score = 28.9 bits (63), Expect = 7.2
 Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = +1

Query: 31   KEQVMKILDPRL-STVPVHEVMHVFYVALLCTEEHSVQRPTMREVVQILSEL 183
            + +  ++ DP + S     E+  V  +A LC  E+  QRPT +++V  L ++
Sbjct: 957  ESRASEVFDPLIYSKENDKEMFRVLEIACLCLSENPKQRPTTQQLVSWLDDV 1008



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>ILPR_BRALA (O02466) Insulin-like peptide receptor precursor (EC 2.7.10.1) (ILP|
            receptor) [Contains: Insulin-like peptide receptor alpha
            chain; Insulin-like peptide receptor beta chain]
          Length = 1363

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
 Frame = +1

Query: 22   GPSKEQVMK-ILDPRLSTVPVHEVMHVFYVALLCTEEHSVQRPTMREVVQILS 177
            G S E+V+K ++D  +   P      ++ +  LC +     RPT  E+V+ILS
Sbjct: 1228 GKSNEEVLKFVIDGGMLEKPEGCPNKLYDLMKLCWQYRQSMRPTFLEIVEILS 1280



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>DSC1_MOUSE (P55849) Desmocollin-1 precursor|
          Length = 886

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = -1

Query: 174 QDLHNLPHRRALHAVLLGAEQGD 106
           QDL N PH +A++ +L G E G+
Sbjct: 380 QDLPNTPHSKAVYTILKGNENGN 402



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>GSPC_AERHY (P45790) General secretion pathway protein C|
          Length = 290

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 26/79 (32%), Positives = 34/79 (43%), Gaps = 5/79 (6%)
 Frame = +1

Query: 16  MTGPSKEQVMKILDPRLSTVPVHEVMHVFYVALLCTEEHSVQRPTMREV---VQILSELP 186
           MT P +  ++  L  R  TVP+       +  LL    H     T R +    Q  S+  
Sbjct: 1   MTLPFRNDLLSSLLARCKTVPLSRFSQPLFWLLLLLLAHQCAGLTWRLLDLGSQQASQPW 60

Query: 187 KPA--ASQGDGEEELPLSG 237
           +PA  ASQG G   L LSG
Sbjct: 61  QPAMVASQGQGSARLDLSG 79


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,865,918
Number of Sequences: 219361
Number of extensions: 1111444
Number of successful extensions: 3185
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3108
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3183
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3188886965
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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