>VDAC1_WHEAT (P46274) Outer mitochondrial membrane protein porin|
           (Voltage-dependent anion-selective channel protein)
           (VDAC)
          Length = 275

 Score =  300 bits (769), Expect(2) = 9e-94
 Identities = 155/164 (94%), Positives = 157/164 (95%)
 Frame = +2

Query: 2   KFTLTTYTANGAAITATSTKKADLILGEIQSQIKNKNITVDVKANSASNVITTITADDLA 181
           KFTLTTYTANG AITATSTKKADL +GEIQSQIKNKNITVDVKANSASNVITTITADDLA
Sbjct: 27  KFTLTTYTANGPAITATSTKKADLTVGEIQSQIKNKNITVDVKANSASNVITTITADDLA 86

Query: 182 APGLKTILSFAVPDQKSGKVELQYLHDYAGINASIGLTANPVVNLSAAFGTSALAVGGDV 361
           APGLKTILSFAVPDQKSGKVELQYLHDYAGINASIGLTANPVVNLS AFGTSALAVG DV
Sbjct: 87  APGLKTILSFAVPDQKSGKVELQYLHDYAGINASIGLTANPVVNLSGAFGTSALAVGADV 146

Query: 362 SLDTSTKNFTKYNAAFSYTNQDLIASLNLNNKGDSLTASYYHFV 493
           SLDT+TKNF KYNAA SYTNQDLIASLNLNNKGDSLTASYYH V
Sbjct: 147 SLDTATKNFAKYNAALSYTNQDLIASLNLNNKGDSLTASYYHIV 190



 Score = 63.2 bits (152), Expect(2) = 9e-94
 Identities = 30/31 (96%), Positives = 30/31 (96%)
 Frame = +3

Query: 495 EKSSTAVGAELTHSFSSNENSLTFGTQHTLD 587
           EKS TAVGAELTHSFSSNENSLTFGTQHTLD
Sbjct: 191 EKSGTAVGAELTHSFSSNENSLTFGTQHTLD 221

>VDAC1_ORYSA (Q6K548) Outer mitochondrial membrane protein porin|
           (Voltage-dependent anion-selective channel protein)
           (VDAC)
          Length = 273

 Score =  264 bits (674), Expect(2) = 9e-82
 Identities = 134/164 (81%), Positives = 147/164 (89%)
 Frame = +2

Query: 2   KFTLTTYTANGAAITATSTKKADLILGEIQSQIKNKNITVDVKANSASNVITTITADDLA 181
           KFTLTTYT+NG AITATSTKKADLI GEIQSQIKNKNITVDVKANS SNV+TT+T D+L 
Sbjct: 26  KFTLTTYTSNGVAITATSTKKADLIFGEIQSQIKNKNITVDVKANSDSNVVTTVTVDELT 85

Query: 182 APGLKTILSFAVPDQKSGKVELQYLHDYAGINASIGLTANPVVNLSAAFGTSALAVGGDV 361
            PGLK+ILSFAVPDQ+SGK ELQY HDYAG++ASIGLTA+PVVNLS+ FGT ALAVG DV
Sbjct: 86  -PGLKSILSFAVPDQRSGKFELQYSHDYAGVSASIGLTASPVVNLSSVFGTKALAVGADV 144

Query: 362 SLDTSTKNFTKYNAAFSYTNQDLIASLNLNNKGDSLTASYYHFV 493
           SLDT+T N TKYNA  S++N DLIASLNLNNKGDSLTASYYH V
Sbjct: 145 SLDTATGNLTKYNAGLSFSNDDLIASLNLNNKGDSLTASYYHIV 188



 Score = 59.7 bits (143), Expect(2) = 9e-82
 Identities = 28/29 (96%), Positives = 29/29 (100%)
 Frame = +3

Query: 501 SSTAVGAELTHSFSSNENSLTFGTQHTLD 587
           S+TAVGAELTHSFSSNENSLTFGTQHTLD
Sbjct: 191 SATAVGAELTHSFSSNENSLTFGTQHTLD 219

>VDAC1_SOLTU (P42055) 34 kDa outer mitochondrial membrane protein porin|
           (Voltage-dependent anion-selective channel protein)
           (VDAC) (POM 34)
          Length = 275

 Score =  219 bits (557), Expect(2) = 1e-64
 Identities = 105/173 (60%), Positives = 135/173 (78%)
 Frame = +2

Query: 2   KFTLTTYTANGAAITATSTKKADLILGEIQSQIKNKNITVDVKANSASNVITTITADDLA 181
           KF++TTY+  G  IT++ +KK DL L ++ +Q+KNKN+T D+K ++ SN+ TTIT D+ A
Sbjct: 27  KFSITTYSPTGVVITSSGSKKGDLFLADVNTQLKNKNVTTDIKVDTNSNLFTTITVDE-A 85

Query: 182 APGLKTILSFAVPDQKSGKVELQYLHDYAGINASIGLTANPVVNLSAAFGTSALAVGGDV 361
           APGLKTILSF VPDQ+SGK+E+QYLHDYAGI  S+GLTANP+VN S   GT+ +A+G DV
Sbjct: 86  APGLKTILSFRVPDQRSGKLEVQYLHDYAGICTSVGLTANPIVNFSGVVGTNIIALGTDV 145

Query: 362 SLDTSTKNFTKYNAAFSYTNQDLIASLNLNNKGDSLTASYYHFVGEVQHSCWG 520
           S DT T +FTK NA  S+TN DL+ASLNLNNKGD+LTASYYH V  +  +  G
Sbjct: 146 SFDTKTGDFTKCNAGLSFTNADLVASLNLNNKGDNLTASYYHTVSPLTSTAVG 198



 Score = 47.4 bits (111), Expect(2) = 1e-64
 Identities = 21/29 (72%), Positives = 25/29 (86%)
 Frame = +3

Query: 501 SSTAVGAELTHSFSSNENSLTFGTQHTLD 587
           +STAVGAE+ HSFS+NEN +T GTQH LD
Sbjct: 193 TSTAVGAEVNHSFSTNENIITVGTQHRLD 221

>VDAC_MAIZE (P42057) Outer plastidial membrane protein porin (Voltage-dependent|
           anion-selective channel protein) (VDAC)
          Length = 277

 Score =  221 bits (562), Expect(2) = 2e-64
 Identities = 106/164 (64%), Positives = 133/164 (81%)
 Frame = +2

Query: 2   KFTLTTYTANGAAITATSTKKADLILGEIQSQIKNKNITVDVKANSASNVITTITADDLA 181
           KF LTT + NG AITA  T+K + I GE+ +QIKNK +TVDVKANS S+++TTIT D+  
Sbjct: 28  KFCLTTSSPNGVAITAAGTRKNESIFGELHTQIKNKKLTVDVKANSESDLLTTITVDEFG 87

Query: 182 APGLKTILSFAVPDQKSGKVELQYLHDYAGINASIGLTANPVVNLSAAFGTSALAVGGDV 361
            PGLK+I++  VPDQ+SGK+E QYLH+YAG+NAS+GL +NP+VNLS AFG+ AL+VG DV
Sbjct: 88  TPGLKSIINLVVPDQRSGKLEFQYLHEYAGVNASVGLNSNPMVNLSGAFGSKALSVGVDV 147

Query: 362 SLDTSTKNFTKYNAAFSYTNQDLIASLNLNNKGDSLTASYYHFV 493
           S DT+T +FTKYNAA S T+ DLIASL+LNN GD+L ASYYH V
Sbjct: 148 SFDTATSDFTKYNAALSLTSPDLIASLHLNNHGDTLVASYYHLV 191



 Score = 45.1 bits (105), Expect(2) = 2e-64
 Identities = 20/29 (68%), Positives = 25/29 (86%)
 Frame = +3

Query: 501 SSTAVGAELTHSFSSNENSLTFGTQHTLD 587
           S TAVGAEL+HS S NE++L FG+QH+LD
Sbjct: 195 SGTAVGAELSHSMSRNESTLIFGSQHSLD 223

>VDAC_PEA (P42054) Outer plastidial membrane protein porin (Voltage-dependent|
           anion-selective channel protein) (VDAC)
          Length = 275

 Score =  200 bits (509), Expect(2) = 1e-57
 Identities = 96/173 (55%), Positives = 129/173 (74%)
 Frame = +2

Query: 2   KFTLTTYTANGAAITATSTKKADLILGEIQSQIKNKNITVDVKANSASNVITTITADDLA 181
           KFT++TY+  G AIT++ TKK +L LG++ +Q+KNKNIT D+K ++ SN+ TTIT ++  
Sbjct: 27  KFTISTYSPTGVAITSSGTKKGELFLGDVNTQLKNKNITTDIKVDTNSNLFTTITVNE-P 85

Query: 182 APGLKTILSFAVPDQKSGKVELQYLHDYAGINASIGLTANPVVNLSAAFGTSALAVGGDV 361
           APG+K ILSF VP+Q SGKVELQYLH+YAGI++S+GL ANP+VN S+  GT+ALA G D+
Sbjct: 86  APGVKAILSFKVPEQTSGKVELQYLHEYAGISSSVGLKANPIVNFSSVIGTNALAFGADI 145

Query: 362 SLDTSTKNFTKYNAAFSYTNQDLIASLNLNNKGDSLTASYYHFVGEVQHSCWG 520
           S DT     TK NAA ++   DLI SL LN KGD L+ASYYH +  + ++  G
Sbjct: 146 SFDTKLGELTKSNAAVNFVKDDLIGSLTLNEKGDLLSASYYHAINPLSNTAVG 198



 Score = 42.4 bits (98), Expect(2) = 1e-57
 Identities = 17/29 (58%), Positives = 23/29 (79%)
 Frame = +3

Query: 501 SSTAVGAELTHSFSSNENSLTFGTQHTLD 587
           S+TAVG +++H FS+ EN+ T GTQH LD
Sbjct: 193 SNTAVGVDISHRFSTKENTFTLGTQHALD 221

>VDAC2_SOLTU (P42056) 36 kDa outer mitochondrial membrane protein porin|
           (Voltage-dependent anion-selective channel protein)
           (VDAC) (POM 36)
          Length = 275

 Score =  212 bits (539), Expect = 7e-55
 Identities = 106/173 (61%), Positives = 134/173 (77%)
 Frame = +2

Query: 2   KFTLTTYTANGAAITATSTKKADLILGEIQSQIKNKNITVDVKANSASNVITTITADDLA 181
           KFT+TTY+  G AITA+  KK +L L ++ +Q+KNKNIT DVK ++ SNV TTIT D+  
Sbjct: 27  KFTVTTYSTTGVAITASGLKKGELFLADVSTQLKNKNITTDVKVDTNSNVYTTITVDE-P 85

Query: 182 APGLKTILSFAVPDQKSGKVELQYLHDYAGINASIGLTANPVVNLSAAFGTSALAVGGDV 361
           APGLKTI SF VPDQKSGKVELQYLH+YAGIN SIGLTA+P+VN S   G + +A+G D+
Sbjct: 86  APGLKTIFSFVVPDQKSGKVELQYLHEYAGINTSIGLTASPLVNFSGVAGNNTVALGTDL 145

Query: 362 SLDTSTKNFTKYNAAFSYTNQDLIASLNLNNKGDSLTASYYHFVGEVQHSCWG 520
           S DT+T NFTK NA  S+++ DLIASL LN+KGD+++ASYYH V  V ++  G
Sbjct: 146 SFDTATGNFTKCNAGLSFSSSDLIASLALNDKGDTVSASYYHTVKPVTNTAVG 198



 Score = 53.9 bits (128), Expect = 3e-07
 Identities = 27/43 (62%), Positives = 32/43 (74%)
 Frame = +3

Query: 459 ETASPHPITTLWEKSSTAVGAELTHSFSSNENSLTFGTQHTLD 587
           +T S     T+   ++TAVGAELTHSFSSNEN+LT GTQH LD
Sbjct: 179 DTVSASYYHTVKPVTNTAVGAELTHSFSSNENTLTIGTQHLLD 221

>VDAC2_ARATH (Q9SMX3) Outer mitochondrial membrane protein porin 2|
           (Voltage-dependent anion-selective channel protein 2)
           (VDAC 2)
          Length = 273

 Score =  180 bits (456), Expect(2) = 1e-51
 Identities = 85/164 (51%), Positives = 117/164 (71%)
 Frame = +2

Query: 2   KFTLTTYTANGAAITATSTKKADLILGEIQSQIKNKNITVDVKANSASNVITTITADDLA 181
           KF++TTY++ G AIT T T K  L LG++ +Q+KN N T DVK ++ S+++TT+T D+  
Sbjct: 27  KFSVTTYSSTGVAITTTGTNKGSLFLGDVATQVKNNNFTADVKVSTDSSLLTTLTFDE-P 85

Query: 182 APGLKTILSFAVPDQKSGKVELQYLHDYAGINASIGLTANPVVNLSAAFGTSALAVGGDV 361
           APGLK I+   +PD KSGK E+QY HDYAGI+ S+G TA P+VN S   GT+ L++G DV
Sbjct: 86  APGLKVIVQAKLPDHKSGKAEVQYFHDYAGISTSVGFTATPIVNFSGVVGTNGLSLGTDV 145

Query: 362 SLDTSTKNFTKYNAAFSYTNQDLIASLNLNNKGDSLTASYYHFV 493
           + +T + NF  +NA F++T  DL ASL LN+KG+ L ASYY  V
Sbjct: 146 AYNTESGNFKHFNAGFNFTKDDLTASLILNDKGEKLNASYYQIV 189



 Score = 43.1 bits (100), Expect(2) = 1e-51
 Identities = 17/28 (60%), Positives = 24/28 (85%)
 Frame = +3

Query: 504 STAVGAELTHSFSSNENSLTFGTQHTLD 587
           ST VGAE++H+F++ EN++T GTQH LD
Sbjct: 192 STVVGAEISHNFTTKENAITVGTQHALD 219

>VDAC1_ARATH (Q9SRH5) Outer mitochondrial membrane protein porin 1|
           (Voltage-dependent anion-selective channel protein 1)
           (VDAC 1)
          Length = 275

 Score =  196 bits (499), Expect = 3e-50
 Identities = 99/184 (53%), Positives = 129/184 (70%)
 Frame = +2

Query: 2   KFTLTTYTANGAAITATSTKKADLILGEIQSQIKNKNITVDVKANSASNVITTITADDLA 181
           KF++TT++  G AIT+T TKK DL+LG++  Q + KNIT D+K  + S  + T T D+ A
Sbjct: 27  KFSITTFSPAGVAITSTGTKKGDLLLGDVAFQSRRKNITTDLKVCTDSTFLITATVDE-A 85

Query: 182 APGLKTILSFAVPDQKSGKVELQYLHDYAGINASIGLTANPVVNLSAAFGTSALAVGGDV 361
           APGL++I SF VPDQ SGKVELQYLH+YAGI+ S+GLT NP VN S   G++ LAVG DV
Sbjct: 86  APGLRSIFSFKVPDQNSGKVELQYLHEYAGISTSMGLTQNPTVNFSGVIGSNVLAVGTDV 145

Query: 362 SLDTSTKNFTKYNAAFSYTNQDLIASLNLNNKGDSLTASYYHFVGEVQHSCWGGADPQLL 541
           S DT + NFTK NA  S+T +DLIASL +N+KGD L ASYYH V  + ++  G      L
Sbjct: 146 SFDTKSGNFTKINAGLSFTKEDLIASLTVNDKGDLLNASYYHIVNPLFNTAVGAEVSHKL 205

Query: 542 EQRE 553
             ++
Sbjct: 206 SSKD 209



 Score = 40.0 bits (92), Expect = 0.005
 Identities = 16/28 (57%), Positives = 24/28 (85%)
 Frame = +3

Query: 504 STAVGAELTHSFSSNENSLTFGTQHTLD 587
           +TAVGAE++H  SS ++++T GTQH+LD
Sbjct: 194 NTAVGAEVSHKLSSKDSTITVGTQHSLD 221

>VDAC_CAEEL (Q21752) Probable voltage-dependent anion-selective channel|
          Length = 283

 Score = 54.7 bits (130), Expect = 2e-07
 Identities = 40/141 (28%), Positives = 69/141 (48%), Gaps = 4/141 (2%)
 Frame = +2

Query: 83  EIQSQIKNKNITVDVKANSASNVITTITADDLAAPGLKTIL-SFAVPD--QKSGKVELQY 253
           +++ +I    IT+  K N+ + + T I  ++    GLK  L S   P   ++SGKV+L +
Sbjct: 60  DVKYKIPQYGITLTEKWNTENQLGTVIEVNEQFGRGLKVTLDSLYAPHAGKRSGKVKLDW 119

Query: 254 LHDYAGINASIGLTANPVVNLSAAFGTSALAVGGDVSLDTSTKNFTKYNAAFSY-TNQDL 430
               A + A +G+T+ PV+N +  F      +G   + D+S+      + AF + T Q  
Sbjct: 120 ALPTARVTADVGVTSAPVINAAGVFSRDGWLIGAAATFDSSSNKLAATSLAFGHSTPQYT 179

Query: 431 IASLNLNNKGDSLTASYYHFV 493
           + S  +N+      AS YH V
Sbjct: 180 LHSFVINS--TDFGASLYHKV 198

>VDAC_NEUCR (P07144) Outer mitochondrial membrane protein porin|
          Length = 283

 Score = 47.8 bits (112), Expect = 2e-05
 Identities = 42/163 (25%), Positives = 61/163 (37%), Gaps = 6/163 (3%)
 Frame = +2

Query: 23  TANGAAITATSTKKADLIL-GEIQSQIKNK--NITVDVKANSASNVITTITADDLAAPGL 193
           T N  A   T     D +  G ++ +  +K   +TV    N+A+ + T +   D  A GL
Sbjct: 35  TPNNVAFKVTGKSTHDKVTSGALEGKFTDKPNGLTVTQTWNTANALETKVEMADNLAKGL 94

Query: 194 KT--ILSFA-VPDQKSGKVELQYLHDYAGINASIGLTANPVVNLSAAFGTSALAVGGDVS 364
           K   I SF    + +  K  L +        A   L   P  N+ A  G      G    
Sbjct: 95  KAEGIFSFLPATNARGAKFNLHFKQSNFHGRAFFDLLKGPTANIDAIVGHEGFLAGASAG 154

Query: 365 LDTSTKNFTKYNAAFSYTNQDLIASLNLNNKGDSLTASYYHFV 493
            D      T Y+AA  Y      A++   +     +ASYYH V
Sbjct: 155 YDVQKAAITGYSAAVGYHAPTYSAAITATDNLSVFSASYYHKV 197

>VDAC_SCHPO (Q9P544) Probable outer mitochondrial membrane protein porin|
          Length = 282

 Score = 38.9 bits (89), Expect = 0.011
 Identities = 34/168 (20%), Positives = 65/168 (38%), Gaps = 6/168 (3%)
 Frame = +2

Query: 8   TLTTYTANGAAITATSTKKAD-LILGEIQSQIKNK--NITVDVKANSASNVITTITADDL 178
           ++ T   NG     +  + A  +I G++++   +K   +T+     +A+ + + +   + 
Sbjct: 29  SVRTTAPNGVVFNVSGNQDAKGVISGKLETSFNDKANGLTISQGWTTANVLESKVGLSEQ 88

Query: 179 AAPGLKTILSFAVPDQKSGK---VELQYLHDYAGINASIGLTANPVVNLSAAFGTSALAV 349
            APGL   ++       + K   + L++ H     +AS+       +      G      
Sbjct: 89  FAPGLHLNVNTTFSPATAAKTAILNLEHQHPLIHTHASVNALERKFLG-DFTVGHEGFLA 147

Query: 350 GGDVSLDTSTKNFTKYNAAFSYTNQDLIASLNLNNKGDSLTASYYHFV 493
           G +   D    N + Y A   Y    L  +L  +N      ASYYH V
Sbjct: 148 GAEFGYDVQKGNVSNYAATIGYLASPLSVALQASNNLSVFRASYYHRV 195

>METK_HELPY (P56460) S-adenosylmethionine synthetase (EC 2.5.1.6) (Methionine|
           adenosyltransferase) (AdoMet synthetase) (MAT)
          Length = 385

 Score = 36.2 bits (82), Expect = 0.072
 Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
 Frame = +2

Query: 263 YAGINASIGLTANPVVNLSAAFGTSALAVGGDVSLDTSTKNFTKYNAA---------FSY 415
           YA    +  L A+ V + +      A+ V   VS+  +T N +KY++A         F  
Sbjct: 277 YAARYVAKNLVASGVCDKATVQLAYAIGVIEPVSIYVNTHNTSKYSSAELEKCVKSVFKL 336

Query: 416 TNQDLIASLNLNNKGDSLTASYYHFVGEVQHSCW 517
           T + +I SL+L     SLT++Y HF  E++   W
Sbjct: 337 TPKGIIESLDLLRPIYSLTSAYGHFGRELEEFTW 370

>METK_HELPJ (Q9ZMN5) S-adenosylmethionine synthetase (EC 2.5.1.6) (Methionine|
           adenosyltransferase) (AdoMet synthetase) (MAT)
          Length = 385

 Score = 34.3 bits (77), Expect = 0.27
 Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
 Frame = +2

Query: 263 YAGINASIGLTANPVVNLSAAFGTSALAVGGDVSLDTSTKNFTKYNAA---------FSY 415
           YA    +  L A+ V + +      A+ V   VS+  +T N +K+++A         F  
Sbjct: 277 YAARYVAKNLVASGVCDKATVQLAYAIGVIEPVSIYVNTHNTSKHSSAELEKCVKSVFKL 336

Query: 416 TNQDLIASLNLNNKGDSLTASYYHFVGEVQHSCW 517
           T + +I SL+L     SLT++Y HF  E++   W
Sbjct: 337 TPKGIIESLDLLRPIYSLTSAYGHFGRELEEFTW 370

>VDAC2_YEAST (P40478) Outer mitochondrial membrane protein porin 2|
           (Voltage-dependent anion-selective channel protein 2)
           (VDAC 2)
          Length = 281

 Score = 34.3 bits (77), Expect = 0.27
 Identities = 38/169 (22%), Positives = 69/169 (40%), Gaps = 8/169 (4%)
 Frame = +2

Query: 11  LTTYTANGAAITATSTKKADLILGEIQSQIKNK------NITVDVKANSASNVITTITAD 172
           ++T T NG   T  +  K  +  G IQ+ ++ +       +++    ++ + + T I   
Sbjct: 31  ISTTTENGVNFTLKA--KQGVTEGPIQTSVEGRFYDRKEGVSLSQSWSNQNRLNTRIEFS 88

Query: 173 DLAAPGLK-TILSFAVPDQ-KSGKVELQYLHDYAGINASIGLTANPVVNLSAAFGTSALA 346
            +A PG K  + +F  P   K+ K  L Y         SI +        S   G     
Sbjct: 89  KIA-PGWKGDVNAFLTPQSIKNAKFNLSYAQKSFAARTSIDILQPKDFVGSVTLGHRGFV 147

Query: 347 VGGDVSLDTSTKNFTKYNAAFSYTNQDLIASLNLNNKGDSLTASYYHFV 493
            G D++ DT+     +Y  +  Y  ++    L+ NN+    TAS++  V
Sbjct: 148 GGTDIAYDTAAGLCARYAMSIGYLAREYSFILSTNNR-QCATASFFQNV 195

>METK_RICTY (Q9RL99) S-adenosylmethionine synthetase (EC 2.5.1.6) (Methionine|
           adenosyltransferase) (AdoMet synthetase) (MAT)
          Length = 382

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 28/86 (32%), Positives = 43/86 (50%)
 Frame = +2

Query: 272 INASIGLTANPVVNLSAAFGTSALAVGGDVSLDTSTKNFTKYNAAFSYTNQDLIASLNLN 451
           I+ +IG+ A+PV   +  FGTS L      S + +TK  T++   F      +I +L L+
Sbjct: 299 ISYAIGV-ASPVSVYAETFGTSKL------SNEQTTKLITEH---FDMRPGKIIKNLKLH 348

Query: 452 NKGDSLTASYYHFVGEVQHSCWGGAD 529
            +    TASY HF  E ++  W   D
Sbjct: 349 TQCYQKTASYGHFGREDENFTWEQLD 374

>COAT_TRSV (Q88894) Coat protein precursor (Capsid protein)|
          Length = 515

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 18/78 (23%)
 Frame = +2

Query: 218 PDQKSGKVELQ---YLHDYAGINASIGLTANPVVNLSAAFG---------------TSAL 343
           PD  +G V      Y+HD+A  +A++ L +NP+  L AA G                 A 
Sbjct: 367 PDANTGVVNFDIPGYIHDFASKDATVTLASNPLSWLVAATGWHYGEVDLCISWSRSKQAQ 426

Query: 344 AVGGDVSLDTSTKNFTKY 397
           A  G VS+ T+ +++  Y
Sbjct: 427 AQEGSVSITTNYRDWGAY 444

>POL2_TRSV (Q6UR06) RNA2 polyprotein (P2) [Contains: P2A protein (2A); Movement|
            protein (2B-MP); Coat protein (2C-CP)]
          Length = 1101

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 18/78 (23%)
 Frame = +2

Query: 218  PDQKSGKVELQ---YLHDYAGINASIGLTANPVVNLSAAFG---------------TSAL 343
            PD  +G V      Y+HD+A  +A++ L +NP+  L AA G                 A 
Sbjct: 953  PDANTGVVNFDIPGYIHDFASKDATVTLASNPLSWLVAATGWHYGEVDLCISWPRSKQAQ 1012

Query: 344  AVGGDVSLDTSTKNFTKY 397
            A  G VS+ T+ +++  Y
Sbjct: 1013 AQEGSVSITTNYRDWGAY 1030

>LEU2_MYCSM (Q938C9) 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)|
           (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI)
          Length = 422

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 25/71 (35%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
 Frame = +2

Query: 182 APGLKTILSFAVPDQKSGKVELQYLHDYAGINASIGLTANPVVNLSAAFGTSALAVG-GD 358
           APG++ I++ A        + L YL D A   A I  +        A FG     VG G+
Sbjct: 315 APGVRLIVTPASQQVYRDAMRLGYLQDIADAGAVITNST-----CGACFGYHMGVVGPGE 369

Query: 359 VSLDTSTKNFT 391
           V L +ST+NFT
Sbjct: 370 VCLTSSTRNFT 380

>SRP_DROME (P52172) Box A-binding factor (ABF) (GATA-binding factor-B)|
           (Transcription factor GATA-B) (dGATA-B) (Protein
           serpent)
          Length = 1264

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
 Frame = -1

Query: 374 MYQATHHHQQLEH*FQTQQRG*L--QDWQSSQCLH*YQHNHVSTGA 243
           ++Q  HHHQQ  H  Q QQ+     Q  Q  Q  H + HN+ ++ A
Sbjct: 406 LHQQQHHHQQQLHHHQQQQQQLYHQQQQQQQQQQHHHHHNNSTSSA 451

>Y4SI_RHISN (P55652) Probable chemoreceptor y4sI (Methyl-accepting chemotaxis|
           protein)
          Length = 756

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 35/143 (24%), Positives = 61/143 (42%), Gaps = 6/143 (4%)
 Frame = +2

Query: 26  ANGAAITATSTKKADLILGEIQSQIKNKNITVDVKANSASNVITTITADDLAAPG----L 193
           A GA I +T T      +G + +   + N+ +   ANS   V+T  T   L+APG     
Sbjct: 158 AEGAIIYSTGTNP----VGPVDAN-GSINLAIASSANSQEAVMTDFTPPTLSAPGQALYA 212

Query: 194 KTILSFAVPDQKSGKVELQYLHDYAGINASIGLTANPVVNLSAAFG--TSALAVGGDVSL 367
             I+   +PD+++G + +    +            N V+  +  FG  + AL  G D   
Sbjct: 213 VAIVHPFIPDKRNGTLLISMSTE----------MLNAVMGQAKGFGPHSEALIAGSD-GK 261

Query: 368 DTSTKNFTKYNAAFSYTNQDLIA 436
             S  + ++   A +  N DL++
Sbjct: 262 PRSLSSISRDEDAEAVVNSDLLS 284

>RBF1_CANAL (Q00312) Transcription factor RBF1 (RPG-box-binding factor)|
           (Repressor-activator protein 1)
          Length = 527

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 23/60 (38%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
 Frame = -1

Query: 368 QATHHHQQLEH*FQTQQRG*LQDWQSSQCL---H*YQHNHVSTGAPPFQISDQEQQSSRW 198
           QA   HQQL+H +Q QQ+   Q  Q SQ L   H  QH HV       +    E   SR+
Sbjct: 122 QAQREHQQLQHAYQQQQQ-LHQLGQLSQQLAQPHLSQHEHVRDALTTDEFDTNEDLRSRY 180

>GTFB_STRMU (P08987) Glucosyltransferase-I precursor (EC 2.4.1.5) (GTF-I)|
           (Dextransucrase) (Sucrose 6-glucosyltransferase)
          Length = 1476

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 21/58 (36%), Positives = 28/58 (48%)
 Frame = +2

Query: 11  LTTYTANGAAITATSTKKADLILGEIQSQIKNKNITVDVKANSASNVITTITADDLAA 184
           +T  T +G  + A S         E +SQI N + T  V AN  SNV T +T+   AA
Sbjct: 26  MTLTTLSGGLVKADSN--------ESKSQISNDSNTSVVTANEESNVTTEVTSKQEAA 75

>FLID_BACHD (Q9K6W0) Flagellar hook-associated protein 2 (HAP2) (Filament cap|
           protein) (Flagellar cap protein)
          Length = 532

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 35/145 (24%), Positives = 64/145 (44%), Gaps = 11/145 (7%)
 Frame = +2

Query: 5   FTLTTYTANGAAITATSTKKADLILGEIQSQIKNKNITVDVKANSASNVI---TTITADD 175
           FT+TTY ++GAA+  + T      L  +   I +  + V +  NS  + +    T T   
Sbjct: 144 FTITTYNSSGAAVEKSFTIDTSKSLDSLFKDINSAGLGVRMSYNSTYDKVIIERTETGAF 203

Query: 176 LAAPGLK--TILSFAVPDQKSGKVELQYLHDYAGINASIG-----LTANPVVNLSAAFGT 334
            AA G     I+        +  ++L   ++ +G NA +      +++ P+V   +   T
Sbjct: 204 NAADGSNDYQIVFGGDTGFLNDVLKLNQANEVSGTNAEVEFIDPIMSSEPIVVSDSR--T 261

Query: 335 SALAVGG-DVSLDTSTKNFTKYNAA 406
           + + VGG   SL  +T+ F   N +
Sbjct: 262 NRVTVGGITFSLTGTTEGFETLNVS 286

>POLG_TEV (P04517) Genome polyprotein [Contains: P1 proteinase (N-terminal|
            protein); Helper component proteinase (EC 3.4.22.45)
            (HC-pro); Protein P3; 6 kDa protein 1 (6K1); Cytoplasmic
            inclusion protein (EC 3.6.1.-) (CI); 6 kDa protein 2
            (6K2); Viral geno
          Length = 3054

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 1/98 (1%)
 Frame = +2

Query: 50   TSTKKADLILGEIQSQIKNK-NITVDVKANSASNVITTITADDLAAPGLKTILSFAVPDQ 226
            TS KK  ++   I   I+N   I +DV  +  + V+  +  D+ A    KT++S+    Q
Sbjct: 1457 TSVKKHFIVATNI---IENGVTIDIDVVVDFGTKVVPVLDVDNRAVQYNKTVVSYGERIQ 1513

Query: 227  KSGKVELQYLHDYAGINASIGLTANPVVNLSAAFGTSA 340
            K G+V         G+   IG T   +V +     T A
Sbjct: 1514 KLGRVG----RHKEGVALRIGQTNKTLVEIPEMVATEA 1547


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,040,087
Number of Sequences: 219361
Number of extensions: 1488413
Number of successful extensions: 4764
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 4601
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4755
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5101629520
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)