ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags10f01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_479195.1| Oryza sativa (japonica cultivar-group), mRNA 149 1e-32
2dbj|AK070292.1| Oryza sativa (japonica cultivar-group) cDNA clon... 149 1e-32
3dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 105 2e-19
4dbj|AP004341.2| Oryza sativa (japonica cultivar-group) genomic D... 105 2e-19
5gb|AY109571.1| Zea mays CL3161_1 mRNA sequence 90 1e-14
6gb|AY112393.1| Zea mays CL14390_1 mRNA sequence 66 2e-07
7emb|Y16672.1|MSY16672 Medicago sativa mRNA for putative arginine... 64 6e-07
8dbj|AK073057.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 6e-04
9gb|AC103551.7| Oryza sativa chromosome 3 BAC OSJNBb0058G04 genom... 50 0.009
10gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 50 0.009
11dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.009
12gb|AC144459.8| Medicago truncatula clone mth2-23o13, complete se... 48 0.036
13gb|DQ235162.1| Solanum tuberosum clone 153C04 unknown mRNA 46 0.14
14gb|DQ228318.1| Solanum tuberosum clone 130D03 mRNA sequence 46 0.14
15gb|AC160929.2| Mus musculus BAC clone RP24-380G7 from chromosome... 46 0.14
16dbj|AK018992.1| Mus musculus adult male testis cDNA, RIKEN full-... 46 0.14
17gb|AC126039.3| Mus musculus BAC clone RP24-234N22 from 12, compl... 46 0.14
18dbj|AP006102.1| Lotus japonicus genomic DNA, chromosome 4, clone... 46 0.14
19ref|XM_483049.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.57
20ref|XM_507274.1| PREDICTED Oryza sativa (japonica cultivar-group... 44 0.57
21dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.57
22dbj|AP004376.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.57
23dbj|AK103676.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.57
24dbj|AK064030.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.57
25emb|AL157392.18| Human DNA sequence from clone RP11-295P9 on chr... 42 2.2
26emb|AL137790.4| Human DNA sequence from clone RP5-1003J2 on chro... 42 2.2
27gb|AC090771.4| Homo sapiens chromosome 18, clone RP11-795H16, co... 42 2.2
28emb|AL928962.9| Mouse DNA sequence from clone RP23-455A4 on chro... 42 2.2
29gb|BT018277.1| Zea mays clone EL01T0203H04.c mRNA sequence 40 8.8
30gb|AF247163.1| Oryza sativa alpha-expansin OsEXPA6 mRNA, complet... 40 8.8
31gb|AC125083.3| Mus musculus chromosome 19 clone RP24-98I2, compl... 40 8.8
32gb|AC103947.20| Mus musculus chromosome 19, clone RP23-261A21, c... 40 8.8
33ref|XM_752910.1| Ustilago maydis 521 hypothetical protein (UM018... 40 8.8
34ref|XM_386942.1| Gibberella zeae PH-1 chromosome 4 hypothetical ... 40 8.8
35ref|XM_532078.2| PREDICTED: Canis familiaris similar to NG,NG-di... 40 8.8
36ref|XM_854716.1| PREDICTED: Canis familiaris similar to NG,NG-di... 40 8.8
37ref|XM_854684.1| PREDICTED: Canis familiaris similar to NG,NG-di... 40 8.8
38emb|AL590609.15| Human DNA sequence from clone RP11-4M23 on chro... 40 8.8
39emb|Z99124.2|BSUB0021 Bacillus subtilis complete genome (section... 40 8.8
40emb|CR626878.14| Zebrafish DNA sequence from clone DKEY-196H17 i... 40 8.8
41gb|AC125496.3| Oryza sativa (japonica cultivar-group) chromosome... 40 8.8
42gb|AC175781.3| Cavia porcellus clone CH234-402D11, complete sequ... 40 8.8
43dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
44emb|BX323024.11| Zebrafish DNA sequence from clone DKEYP-2B10 in... 40 8.8
45gb|AC136189.2| Homo sapiens 3 BAC RP11-519B15 (Roswell Park Canc... 40 8.8
46dbj|AP005913.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
47dbj|AP003508.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
48dbj|AK107698.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.8
49dbj|AK071765.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.8
50dbj|AK063879.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.8
51gb|AE015451.1| Pseudomonas putida KT2440 complete genome 40 8.8
52emb|BX511012.5| Human DNA sequence from clone RP4-737A14 on chro... 40 8.8
53dbj|AB005554.1| Bacillus subtilis genomic DNA, 36 kb region betw... 40 8.8
54emb|AL935193.9| Zebrafish DNA sequence from clone CH211-209H11, ... 40 8.8 
>ref|XM_479195.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1231

 Score =  149 bits (75), Expect = 1e-32
 Identities = 221/270 (81%), Gaps = 6/270 (2%)
 Strand = Plus / Plus

                                                                       
Query: 11  ggtgcagtttgccaagtatggcccaaatgctgagaggattcagaaagggagaatcatgga 70
           |||||||||||||||||| ||||| || |||||  | || || ||||| | |||||||||
Sbjct: 376 ggtgcagtttgccaagtacggcccgaacgctgaacgaatccataaaggaaaaatcatgga 435

                                                                       
Query: 71  aacggtcccgaagccaaggggtcgttccagaagccgcagtccaagacgggggagccggga 130
            || || || | | | ||||||||||||||||||||||||||||||||||||  ||| ||
Sbjct: 436 gacagttccaaggtctaggggtcgttccagaagccgcagtccaagacgggggtaccgtga 495

                                                                       
Query: 131 tgatcatcggggcagagattctagaaggcgaagtcgcagtcggagtggagatagatatgg 190
           |||  ||||||  ||||| | ||||| ||| |||||      |||| |||||||||||||
Sbjct: 496 tgactatcgggagagagactatagaaagcggagtcg------gagtagagatagatatgg 549

                                                                       
Query: 191 acgtgacaggtacagagagagggatcatcatcgtcgtagcaggagtcgtagtgctagtcc 250
           |||||||||||| || ||||| ||| ||| ||||||||||||||| || ||    | |||
Sbjct: 550 acgtgacaggtatagggagagagattatcgtcgtcgtagcaggagccgcagctacactcc 609

                                         
Query: 251 tgatgattacaagaggcgtggcagagacag 280
           ||||||||||| ||| ||||||||||||||
Sbjct: 610 tgatgattacaggagacgtggcagagacag 639



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 71/80 (88%)
 Strand = Plus / Plus

                                                                       
Query: 289 gtcgtagcaggagccgcagctacagtcctgttgatgacaggaagggtggcagagacagtt 348
           |||||||||||||||||||||||| ||||| |||| ||||||   |||||||||||||| 
Sbjct: 582 gtcgtagcaggagccgcagctacactcctgatgattacaggagacgtggcagagacagtg 641

                               
Query: 349 tgtcgcccgcacgcagaagc 368
           |||| || ||||||||||||
Sbjct: 642 tgtcacctgcacgcagaagc 661



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                               
Query: 288 agtcgtagcaggagccgcagctacagtcctgttgatgacaggaagggtggca 339
           |||||||||||||| || ||||||||||||| |||| |||||||| ||||||
Sbjct: 665 agtcgtagcaggagtcgtagctacagtcctgatgattacaggaagcgtggca 716



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                               
Query: 360 cgcagaagcactagtcgctctcctcgcaagacacca 395
           ||||||||| |||||||||||||||||| |||||||
Sbjct: 836 cgcagaagccctagtcgctctcctcgcaggacacca 871



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                              
Query: 223 gtcgtagcaggagtcgtagtgctagtcctgatgattacaagaggcgtggca 273
           |||||||||||||||||||    |||||||||||||||| || ||||||||
Sbjct: 666 gtcgtagcaggagtcgtagctacagtcctgatgattacaggaagcgtggca 716
to top
>dbj|AK070292.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050C05, full
           insert sequence
          Length = 1231

 Score =  149 bits (75), Expect = 1e-32
 Identities = 221/270 (81%), Gaps = 6/270 (2%)
 Strand = Plus / Plus

                                                                       
Query: 11  ggtgcagtttgccaagtatggcccaaatgctgagaggattcagaaagggagaatcatgga 70
           |||||||||||||||||| ||||| || |||||  | || || ||||| | |||||||||
Sbjct: 376 ggtgcagtttgccaagtacggcccgaacgctgaacgaatccataaaggaaaaatcatgga 435

                                                                       
Query: 71  aacggtcccgaagccaaggggtcgttccagaagccgcagtccaagacgggggagccggga 130
            || || || | | | ||||||||||||||||||||||||||||||||||||  ||| ||
Sbjct: 436 gacagttccaaggtctaggggtcgttccagaagccgcagtccaagacgggggtaccgtga 495

                                                                       
Query: 131 tgatcatcggggcagagattctagaaggcgaagtcgcagtcggagtggagatagatatgg 190
           |||  ||||||  ||||| | ||||| ||| |||||      |||| |||||||||||||
Sbjct: 496 tgactatcgggagagagactatagaaagcggagtcg------gagtagagatagatatgg 549

                                                                       
Query: 191 acgtgacaggtacagagagagggatcatcatcgtcgtagcaggagtcgtagtgctagtcc 250
           |||||||||||| || ||||| ||| ||| ||||||||||||||| || ||    | |||
Sbjct: 550 acgtgacaggtatagggagagagattatcgtcgtcgtagcaggagccgcagctacactcc 609

                                         
Query: 251 tgatgattacaagaggcgtggcagagacag 280
           ||||||||||| ||| ||||||||||||||
Sbjct: 610 tgatgattacaggagacgtggcagagacag 639



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 71/80 (88%)
 Strand = Plus / Plus

                                                                       
Query: 289 gtcgtagcaggagccgcagctacagtcctgttgatgacaggaagggtggcagagacagtt 348
           |||||||||||||||||||||||| ||||| |||| ||||||   |||||||||||||| 
Sbjct: 582 gtcgtagcaggagccgcagctacactcctgatgattacaggagacgtggcagagacagtg 641

                               
Query: 349 tgtcgcccgcacgcagaagc 368
           |||| || ||||||||||||
Sbjct: 642 tgtcacctgcacgcagaagc 661



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                               
Query: 288 agtcgtagcaggagccgcagctacagtcctgttgatgacaggaagggtggca 339
           |||||||||||||| || ||||||||||||| |||| |||||||| ||||||
Sbjct: 665 agtcgtagcaggagtcgtagctacagtcctgatgattacaggaagcgtggca 716



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                               
Query: 360 cgcagaagcactagtcgctctcctcgcaagacacca 395
           ||||||||| |||||||||||||||||| |||||||
Sbjct: 836 cgcagaagccctagtcgctctcctcgcaggacacca 871



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                              
Query: 223 gtcgtagcaggagtcgtagtgctagtcctgatgattacaagaggcgtggca 273
           |||||||||||||||||||    |||||||||||||||| || ||||||||
Sbjct: 666 gtcgtagcaggagtcgtagctacagtcctgatgattacaggaagcgtggca 716
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  105 bits (53), Expect = 2e-19
 Identities = 98/113 (86%)
 Strand = Plus / Plus

                                                                            
Query: 168      agtcggagtggagatagatatggacgtgacaggtacagagagagggatcatcatcgtcgt 227
                ||||||||| ||||||||||||||||||||||||| || ||||| ||| ||| |||||||
Sbjct: 25742111 agtcggagtagagatagatatggacgtgacaggtatagggagagagattatcgtcgtcgt 25742170

                                                                     
Query: 228      agcaggagtcgtagtgctagtcctgatgattacaagaggcgtggcagagacag 280
                |||||||| || ||    | |||||||||||||| ||| ||||||||||||||
Sbjct: 25742171 agcaggagccgcagctacactcctgatgattacaggagacgtggcagagacag 25742223



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 36/36 (100%)
 Strand = Plus / Plus

                                                    
Query: 87       aggggtcgttccagaagccgcagtccaagacggggg 122
                ||||||||||||||||||||||||||||||||||||
Sbjct: 25741585 aggggtcgttccagaagccgcagtccaagacggggg 25741620



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 52/58 (89%)
 Strand = Plus / Plus

                                                                          
Query: 289      gtcgtagcaggagccgcagctacagtcctgttgatgacaggaagggtggcagagacag 346
                |||||||||||||||||||||||| ||||| |||| ||||||   |||||||||||||
Sbjct: 25742166 gtcgtagcaggagccgcagctacactcctgatgattacaggagacgtggcagagacag 25742223



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                                    
Query: 288      agtcgtagcaggagccgcagctacagtcctgttgatgacaggaagggtggca 339
                |||||||||||||| || ||||||||||||| |||| |||||||| ||||||
Sbjct: 25742334 agtcgtagcaggagtcgtagctacagtcctgatgattacaggaagcgtggca 25742385



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                                    
Query: 360      cgcagaagcactagtcgctctcctcgcaagacacca 395
                ||||||||| |||||||||||||||||| |||||||
Sbjct: 25742586 cgcagaagccctagtcgctctcctcgcaggacacca 25742621



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                                   
Query: 223      gtcgtagcaggagtcgtagtgctagtcctgatgattacaagaggcgtggca 273
                |||||||||||||||||||    |||||||||||||||| || ||||||||
Sbjct: 25742335 gtcgtagcaggagtcgtagctacagtcctgatgattacaggaagcgtggca 25742385



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                                 
Query: 11       ggtgcagtttgccaagtatggcccaaatgctga 43
                |||||||||||||||||| ||||| || |||||
Sbjct: 25740616 ggtgcagtttgccaagtacggcccgaacgctga 25740648
to top
>dbj|AP004341.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0524E08
          Length = 154696

 Score =  105 bits (53), Expect = 2e-19
 Identities = 98/113 (86%)
 Strand = Plus / Plus

                                                                         
Query: 168   agtcggagtggagatagatatggacgtgacaggtacagagagagggatcatcatcgtcgt 227
             ||||||||| ||||||||||||||||||||||||| || ||||| ||| ||| |||||||
Sbjct: 59273 agtcggagtagagatagatatggacgtgacaggtatagggagagagattatcgtcgtcgt 59332

                                                                  
Query: 228   agcaggagtcgtagtgctagtcctgatgattacaagaggcgtggcagagacag 280
             |||||||| || ||    | |||||||||||||| ||| ||||||||||||||
Sbjct: 59333 agcaggagccgcagctacactcctgatgattacaggagacgtggcagagacag 59385



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 36/36 (100%)
 Strand = Plus / Plus

                                                 
Query: 87    aggggtcgttccagaagccgcagtccaagacggggg 122
             ||||||||||||||||||||||||||||||||||||
Sbjct: 58747 aggggtcgttccagaagccgcagtccaagacggggg 58782



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 52/58 (89%)
 Strand = Plus / Plus

                                                                       
Query: 289   gtcgtagcaggagccgcagctacagtcctgttgatgacaggaagggtggcagagacag 346
             |||||||||||||||||||||||| ||||| |||| ||||||   |||||||||||||
Sbjct: 59328 gtcgtagcaggagccgcagctacactcctgatgattacaggagacgtggcagagacag 59385



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                                 
Query: 288   agtcgtagcaggagccgcagctacagtcctgttgatgacaggaagggtggca 339
             |||||||||||||| || ||||||||||||| |||| |||||||| ||||||
Sbjct: 59496 agtcgtagcaggagtcgtagctacagtcctgatgattacaggaagcgtggca 59547



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                                 
Query: 360   cgcagaagcactagtcgctctcctcgcaagacacca 395
             ||||||||| |||||||||||||||||| |||||||
Sbjct: 59748 cgcagaagccctagtcgctctcctcgcaggacacca 59783



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                                
Query: 223   gtcgtagcaggagtcgtagtgctagtcctgatgattacaagaggcgtggca 273
             |||||||||||||||||||    |||||||||||||||| || ||||||||
Sbjct: 59497 gtcgtagcaggagtcgtagctacagtcctgatgattacaggaagcgtggca 59547



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 11    ggtgcagtttgccaagtatggcccaaatgctga 43
             |||||||||||||||||| ||||| || |||||
Sbjct: 57778 ggtgcagtttgccaagtacggcccgaacgctga 57810
to top
>gb|AY109571.1| Zea mays CL3161_1 mRNA sequence
          Length = 1429

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 93/109 (85%)
 Strand = Plus / Minus

                                                                        
Query: 11   ggtgcagtttgccaagtatggcccaaatgctgagaggattcagaaagggagaatcatgga 70
            |||||||||||||||||| ||||||||||||||  ||||| | |||||||||||  ||||
Sbjct: 1162 ggtgcagtttgccaagtacggcccaaatgctgaacggattaataaagggagaatagtgga 1103

                                                             
Query: 71   aacggtcccgaagccaaggggtcgttccagaagccgcagtccaagacgg 119
              | || || | ||| ||||  |||||||||||||||||||||||||||
Sbjct: 1102 gccagttccaaggcccagggaccgttccagaagccgcagtccaagacgg 1054



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 50/55 (90%)
 Strand = Plus / Minus

                                                                  
Query: 492 tctcctgttaggcgcaatgatgagcggtctccaggctctcgtagcccttcaacat 546
           |||||||| |||||||||||||| ||||||||| |||| || |||||||||||||
Sbjct: 726 tctcctgtcaggcgcaatgatgaccggtctccacgctcacggagcccttcaacat 672



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 63/73 (86%)
 Strand = Plus / Minus

                                                                       
Query: 303 cgcagctacagtcctgttgatgacaggaagggtggcagagacagtttgtcgcccgcacgc 362
           |||||||||||||||| |||| ||| |||| |||| |||||||||||||| || ||||| 
Sbjct: 924 cgcagctacagtcctgatgattacaagaagcgtgggagagacagtttgtctcctgcacga 865

                        
Query: 363 agaagcactagtc 375
           | |||| ||||||
Sbjct: 864 ataagccctagtc 852



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                            
Query: 248 tcctgatgattacaagaggcgtggcagagacag 280
           |||||||||||||||||||||||||| ||||||
Sbjct: 829 tcctgatgattacaagaggcgtggcaaagacag 797



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                              
Query: 246 agtcctgatgattacaagaggcgtggcagagacag 280
           ||||||||||||||||||| |||||| ||||||||
Sbjct: 915 agtcctgatgattacaagaagcgtgggagagacag 881



 Score = 48.1 bits (24), Expect = 0.036
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 465 tctcctgttaggcgcaatgatgagcggtctcc 496
           |||||||| |||||||||||||| ||||||||
Sbjct: 726 tctcctgtcaggcgcaatgatgaccggtctcc 695



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 53/64 (82%)
 Strand = Plus / Minus

                                                                       
Query: 379 ctcctcgcaagacaccacctcctcgcgaggggtctccggctaggcgcaatgatgaccagt 438
           |||||||||||||| ||||| |||   || | ||||| |  |||||||||||||||| ||
Sbjct: 758 ctcctcgcaagacatcaccttctcctaagagatctcctgtcaggcgcaatgatgaccggt 699

               
Query: 439 ctcc 442
           ||||
Sbjct: 698 ctcc 695
to top
>gb|AY112393.1| Zea mays CL14390_1 mRNA sequence
          Length = 903

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 36/37 (97%)
 Strand = Plus / Minus

                                                
Query: 81  aagccaaggggtcgttccagaagccgcagtccaagac 117
           |||||||||||||||| ||||||||||||||||||||
Sbjct: 577 aagccaaggggtcgttgcagaagccgcagtccaagac 541
to top
>emb|Y16672.1|MSY16672 Medicago sativa mRNA for putative arginine/serine-rich splicing
           factor, (sclp gene)
          Length = 1304

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                       
Query: 15  cagtttgccaagtatggcccaaatgctgagaggattcagaaagg 58
           |||||||| || |||||||| |||||||||||||||||||||||
Sbjct: 289 cagtttgcaaaatatggccctaatgctgagaggattcagaaagg 332



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                            
Query: 204 agagagagggatcatcatcgtcgtagcaggagtcgtagtgctagtcctg 252
           ||||| ||||| |||| ||| || ||||| || ||||||||||||||||
Sbjct: 484 agagatagggaccatcgtcgccgaagcagaagccgtagtgctagtcctg 532
to top
>dbj|AK073057.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033020I19, full
           insert sequence
          Length = 1103

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                              
Query: 11  ggtgcagtttgccaagtatggcccaaatgctgagaggattcagaaagggag 61
           ||||||||| |||||||| |||||||||||||| || ||||| || |||||
Sbjct: 362 ggtgcagttcgccaagtacggcccaaatgctgaaagaattcataaggggag 412
to top
>gb|AC103551.7| Oryza sativa chromosome 3 BAC OSJNBb0058G04 genomic sequence, complete
             sequence
          Length = 137709

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                              
Query: 11    ggtgcagtttgccaagtatggcccaaatgctga 43
             ||||||||| |||||||| ||||||||||||||
Sbjct: 21573 ggtgcagttcgccaagtacggcccaaatgctga 21605
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                                 
Query: 11       ggtgcagtttgccaagtatggcccaaatgctga 43
                ||||||||| |||||||| ||||||||||||||
Sbjct: 15315775 ggtgcagttcgccaagtacggcccaaatgctga 15315743



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 290      tcgtagcaggagccgcagct 309
                ||||||||||||||||||||
Sbjct: 12444689 tcgtagcaggagccgcagct 12444708
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                                 
Query: 11       ggtgcagtttgccaagtatggcccaaatgctga 43
                ||||||||| |||||||| ||||||||||||||
Sbjct: 15310309 ggtgcagttcgccaagtacggcccaaatgctga 15310277



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 290      tcgtagcaggagccgcagct 309
                ||||||||||||||||||||
Sbjct: 12441452 tcgtagcaggagccgcagct 12441471
to top
>gb|AC144459.8| Medicago truncatula clone mth2-23o13, complete sequence
          Length = 114098

 Score = 48.1 bits (24), Expect = 0.036
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                             
Query: 15    cagtttgccaagtatggcccaaatgctgagag 46
             |||||||| ||||||||||| |||||||||||
Sbjct: 87730 cagtttgcaaagtatggccctaatgctgagag 87761
to top
>gb|DQ235162.1| Solanum tuberosum clone 153C04 unknown mRNA
          Length = 1069

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 18  tttgccaagtatggcccaaatgctgagaggattcagaaagggagaat 64
           ||||| ||||| ||||||||||||||||| ||| | ||||| |||||
Sbjct: 320 tttgcgaagtacggcccaaatgctgagagaattgacaaaggtagaat 366
to top
>gb|DQ228318.1| Solanum tuberosum clone 130D03 mRNA sequence
          Length = 1064

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 18  tttgccaagtatggcccaaatgctgagaggattcagaaagggagaat 64
           ||||| ||||| ||||||||||||||||| ||| | ||||| |||||
Sbjct: 316 tttgcgaagtacggcccaaatgctgagagaattgacaaaggtagaat 362
to top
>gb|AC160929.2| Mus musculus BAC clone RP24-380G7 from chromosome 12, complete sequence
          Length = 163333

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 601   gctgctcagttgctttatcatga 623
             |||||||||||||||||||||||
Sbjct: 71650 gctgctcagttgctttatcatga 71672
to top
>dbj|AK018992.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:1700127F24 product:unclassifiable, full
           insert sequence
          Length = 600

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 601 gctgctcagttgctttatcatga 623
           |||||||||||||||||||||||
Sbjct: 459 gctgctcagttgctttatcatga 437
to top
>gb|AC126039.3| Mus musculus BAC clone RP24-234N22 from 12, complete sequence
          Length = 154037

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 601   gctgctcagttgctttatcatga 623
             |||||||||||||||||||||||
Sbjct: 11608 gctgctcagttgctttatcatga 11586
to top
>dbj|AP006102.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT16B11, TM0182,
             complete sequence
          Length = 80583

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                
Query: 15    cagtttgccaagtatggcccaaatgctgagaggat 49
             |||||||| |||||||| || ||||||||||||||
Sbjct: 40775 cagtttgctaagtatgggcctaatgctgagaggat 40809
to top
>ref|XM_483049.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1299

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 11  ggtgcagtttgccaagtatggcccaaatgc 40
           ||||||||||||||||||||| || |||||
Sbjct: 386 ggtgcagtttgccaagtatgggcccaatgc 415
to top
>ref|XM_507274.1| PREDICTED Oryza sativa (japonica cultivar-group), P0481F05.17 mRNA
          Length = 1386

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 11  ggtgcagtttgccaagtatggcccaaatgc 40
           ||||||||||||||||||||| || |||||
Sbjct: 375 ggtgcagtttgccaagtatgggcccaatgc 404
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                              
Query: 11       ggtgcagtttgccaagtatggcccaaatgc 40
                ||||||||||||||||||||| || |||||
Sbjct: 24035393 ggtgcagtttgccaagtatgggcccaatgc 24035364
to top
>dbj|AP004376.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0481F05
          Length = 139739

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 11    ggtgcagtttgccaagtatggcccaaatgc 40
             ||||||||||||||||||||| || |||||
Sbjct: 62793 ggtgcagtttgccaagtatgggcccaatgc 62764
to top
>dbj|AK103676.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033136B19, full
           insert sequence
          Length = 1300

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 11  ggtgcagtttgccaagtatggcccaaatgc 40
           ||||||||||||||||||||| || |||||
Sbjct: 386 ggtgcagtttgccaagtatgggcccaatgc 415
to top
>dbj|AK064030.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-125-B07, full
           insert sequence
          Length = 1386

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 11  ggtgcagtttgccaagtatggcccaaatgc 40
           ||||||||||||||||||||| || |||||
Sbjct: 375 ggtgcagtttgccaagtatgggcccaatgc 404
to top
>emb|AL157392.18| Human DNA sequence from clone RP11-295P9 on chromosome 10 Contains the
             PRPF18 gene for PRP18 pre-mRNA processing factor 18
             homolog (yeast), a ribosomal protein L6 (RPL6)(TAXREB107)
             pseudogene, two novel genes, the 5' end of a novel gene,
             the 3' end of the gene for a novel protein (FLJ10210) and
             two CpG islands, complete sequence
          Length = 178908

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 36    aatgctgagaggattcagaaa 56
             |||||||||||||||||||||
Sbjct: 77291 aatgctgagaggattcagaaa 77271
to top
>emb|AL137790.4| Human DNA sequence from clone RP5-1003J2 on chromosome 1p12-13.3 Contains
              3' end of the gene LOC284462, the KCNC4 gene for a
              potassium voltage-gated channel from the Shaw-related
              subfamily member 4, the 3' end of a novel transcript and a
              CpG island, complete sequence
          Length = 127409

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 604    gctcagttgctttatcatgaa 624
              |||||||||||||||||||||
Sbjct: 107085 gctcagttgctttatcatgaa 107105
to top
>gb|AC090771.4| Homo sapiens chromosome 18, clone RP11-795H16, complete sequence
          Length = 186031

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 604   gctcagttgctttatcatgaa 624
             |||||||||||||||||||||
Sbjct: 65754 gctcagttgctttatcatgaa 65734
to top
>emb|AL928962.9| Mouse DNA sequence from clone RP23-455A4 on chromosome 2, complete
             sequence
          Length = 172286

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 35    aaatgctgagaggattcagaa 55
             |||||||||||||||||||||
Sbjct: 52568 aaatgctgagaggattcagaa 52588
to top
>gb|BT018277.1| Zea mays clone EL01T0203H04.c mRNA sequence
          Length = 1284

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 11  ggtgcagtttgccaagtatggcccaaatgctg 42
           |||||||||||| ||||| ||||| |||||||
Sbjct: 359 ggtgcagtttgcaaagtacggccccaatgctg 390
to top
>gb|AF247163.1| Oryza sativa alpha-expansin OsEXPA6 mRNA, complete cds
          Length = 1197

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 290 tcgtagcaggagccgcagct 309
           ||||||||||||||||||||
Sbjct: 260 tcgtagcaggagccgcagct 241
to top
>gb|AC125083.3| Mus musculus chromosome 19 clone RP24-98I2, complete sequence
          Length = 172673

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 598   gaggctgctcagttgctttatcat 621
             |||||| |||||||||||||||||
Sbjct: 95818 gaggctactcagttgctttatcat 95841
to top
>gb|AC103947.20| Mus musculus chromosome 19, clone RP23-261A21, complete sequence
          Length = 245390

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 598    gaggctgctcagttgctttatcat 621
              |||||| |||||||||||||||||
Sbjct: 244550 gaggctactcagttgctttatcat 244527
to top
>ref|XM_752910.1| Ustilago maydis 521 hypothetical protein (UM01856.1) partial mRNA
          Length = 1182

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 289 gtcgtagcaggagccgcagc 308
           ||||||||||||||||||||
Sbjct: 10  gtcgtagcaggagccgcagc 29
to top
>ref|XM_386942.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG06766.1)
           partial mRNA
          Length = 1380

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 300 agccgcagctacagtcctgt 319
           ||||||||||||||||||||
Sbjct: 943 agccgcagctacagtcctgt 962
to top
>ref|XM_532078.2| PREDICTED: Canis familiaris similar to NG,NG-dimethylarginine
           dimethylaminohydrolase 2 (Dimethylargininase 2)
           (Dimethylarginine dimethylaminohydrolase 2) (DDAHII)
           (S-phase protein) (G6a protein), transcript variant 2
           (LOC474846), mRNA
          Length = 1146

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 405 gaggggtctccggctaggcg 424
           ||||||||||||||||||||
Sbjct: 88  gaggggtctccggctaggcg 69
to top
>ref|XM_854716.1| PREDICTED: Canis familiaris similar to NG,NG-dimethylarginine
           dimethylaminohydrolase 2 (Dimethylargininase 2)
           (Dimethylarginine dimethylaminohydrolase 2) (DDAHII)
           (S-phase protein) (G6a protein), transcript variant 4
           (LOC474846), mRNA
          Length = 1008

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 405 gaggggtctccggctaggcg 424
           ||||||||||||||||||||
Sbjct: 88  gaggggtctccggctaggcg 69
to top
>ref|XM_854684.1| PREDICTED: Canis familiaris similar to NG,NG-dimethylarginine
           dimethylaminohydrolase 2 (Dimethylargininase 2)
           (Dimethylarginine dimethylaminohydrolase 2) (DDAHII)
           (S-phase protein) (G6a protein), transcript variant 3
           (LOC474846), mRNA
          Length = 1158

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 405 gaggggtctccggctaggcg 424
           ||||||||||||||||||||
Sbjct: 88  gaggggtctccggctaggcg 69
to top
>emb|AL590609.15| Human DNA sequence from clone RP11-4M23 on chromosome 1 Contains the 5'
             end of the FUCA1 gene for alpha-L- 1 fucosidase (tissue),
             the CNR2 gene for cannabinoid receptor 2 (macrophage), a
             BTB (POZ) domain-containing 6 (BTBD6) pseudogene, a novel
             gene, an H3 histone family 3A (H3F3A) pseudogene, the
             PNRC2 gene for proline-rich nuclear receptor coactivator
             2, the FUS1P1 gene for FUS interacting protein
             (serine-arginine rich) 1, a ribosomal protein L36 (RPL36)
             pseudogene and seven CpG islands, complete sequence
          Length = 172307

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 570   gatcaatggaacagagctgc 589
             ||||||||||||||||||||
Sbjct: 65599 gatcaatggaacagagctgc 65618
to top
>emb|Z99124.2|BSUB0021 Bacillus subtilis complete genome (section 21 of 21): from 4010730 to
              4214630
          Length = 203901

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 115    gacgggggagccgggatgat 134
              ||||||||||||||||||||
Sbjct: 101099 gacgggggagccgggatgat 101080
to top
>emb|CR626878.14| Zebrafish DNA sequence from clone DKEY-196H17 in linkage group 13,
             complete sequence
          Length = 201749

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 540   tcaacatgagctgaatgtca 559
             ||||||||||||||||||||
Sbjct: 90450 tcaacatgagctgaatgtca 90469
to top
>gb|AC125496.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0098H14,
              complete sequence
          Length = 132560

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 290    tcgtagcaggagccgcagct 309
              ||||||||||||||||||||
Sbjct: 102371 tcgtagcaggagccgcagct 102390
to top
>gb|AC175781.3| Cavia porcellus clone CH234-402D11, complete sequence
          Length = 183894

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 565   ctgaggatcaatggaacaga 584
             ||||||||||||||||||||
Sbjct: 78803 ctgaggatcaatggaacaga 78784
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 289     gtcgtagcaggagccgcagc 308
               ||||||||||||||||||||
Sbjct: 4441387 gtcgtagcaggagccgcagc 4441406
to top
>emb|BX323024.11| Zebrafish DNA sequence from clone DKEYP-2B10 in linkage group 7, complete
              sequence
          Length = 178824

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 24     aagtatggcccaaatgctga 43
              ||||||||||||||||||||
Sbjct: 160748 aagtatggcccaaatgctga 160729
to top
>gb|AC136189.2| Homo sapiens 3 BAC RP11-519B15 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 104995

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 610   ttgctttatcatgaacaatc 629
             ||||||||||||||||||||
Sbjct: 88876 ttgctttatcatgaacaatc 88857
to top
>dbj|AP005913.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBb0005A05
          Length = 162520

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 289   gtcgtagcaggagccgcagc 308
             ||||||||||||||||||||
Sbjct: 36117 gtcgtagcaggagccgcagc 36136
to top
>dbj|AP003508.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0470C02
          Length = 158849

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 289   gtcgtagcaggagccgcagc 308
             ||||||||||||||||||||
Sbjct: 89068 gtcgtagcaggagccgcagc 89087
to top
>dbj|AK107698.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-132-C08, full
           insert sequence
          Length = 1044

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 290 tcgtagcaggagccgcagct 309
           ||||||||||||||||||||
Sbjct: 261 tcgtagcaggagccgcagct 242
to top
>dbj|AK071765.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023112N11, full
           insert sequence
          Length = 1425

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 289 gtcgtagcaggagccgcagc 308
           ||||||||||||||||||||
Sbjct: 476 gtcgtagcaggagccgcagc 495
to top
>dbj|AK063879.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-122-F06, full
           insert sequence
          Length = 894

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 289 gtcgtagcaggagccgcagc 308
           ||||||||||||||||||||
Sbjct: 489 gtcgtagcaggagccgcagc 508
to top
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 90      ggtcgttccagaagccgcagtcca 113
               ||||| ||||||||||||||||||
Sbjct: 5151590 ggtcgctccagaagccgcagtcca 5151567
to top
>emb|BX511012.5| Human DNA sequence from clone RP4-737A14 on chromosome 1, complete
            sequence
          Length = 106433

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 570  gatcaatggaacagagctgc 589
            ||||||||||||||||||||
Sbjct: 2443 gatcaatggaacagagctgc 2462
to top
>dbj|AB005554.1| Bacillus subtilis genomic DNA, 36 kb region between gnt and iol
            operons
          Length = 36448

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 115  gacgggggagccgggatgat 134
            ||||||||||||||||||||
Sbjct: 5860 gacgggggagccgggatgat 5879
to top
>emb|AL935193.9| Zebrafish DNA sequence from clone CH211-209H11, complete sequence
          Length = 208059

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 24     aagtatggcccaaatgctga 43
              ||||||||||||||||||||
Sbjct: 163540 aagtatggcccaaatgctga 163559


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,535,184
Number of Sequences: 3902068
Number of extensions: 4535184
Number of successful extensions: 91554
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 91270
Number of HSP's gapped (non-prelim): 277
length of query: 647
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 624
effective length of database: 17,143,297,704
effective search space: 10697417767296
effective search space used: 10697417767296
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top