>SF3A3_HUMAN (Q12874) Splicing factor 3A subunit 3 (Spliceosome-associated|
           protein 61) (SAP 61) (SF3a60)
          Length = 501

 Score =  169 bits (427), Expect = 8e-42
 Identities = 93/212 (43%), Positives = 134/212 (63%), Gaps = 9/212 (4%)
 Frame = +1

Query: 16  FPKYYERLKEIRDYHRRNQSARFVSESDDYEELLK--EEPT------IEFTGEEAFGRYL 171
           F ++Y RLK+I+++HR++ +   V  S ++EELLK  E P+      +EFT EE +GRYL
Sbjct: 81  FAEFYNRLKQIKEFHRKHPNEICVPMSVEFEELLKARENPSEEAQNLVEFTDEEGYGRYL 140

Query: 172 DLHELYNEFINSKFGSLLEYSAYVGTFAQTEKIAHNLKATRPYKEYLEHILEYLTSFLYR 351
           DLH+ Y ++IN K    L+Y  Y+  F Q   I    K    YK YLE +LEYL  +  R
Sbjct: 141 DLHDCYLKYINLKASEKLDYITYLSIFDQLFDIPKERKNAE-YKRYLEMLLEYLQDYTDR 199

Query: 352 TEPLQDIEKIFTKLESEFEEQWANGEVPGWENKDSEKESVLHESA-VDLDYYSTVEELVE 528
            +PLQD  ++F K+++EFE++W NG  PGW  + S   ++ H  A +DL  +S+ EEL  
Sbjct: 200 VKPLQDQNELFGKIQAEFEKKWENGTFPGWPKETS--SALTHAGAHLDLSAFSSWEELAS 257

Query: 529 LGPEKLKEALTARGLKGGGTVQQRAERLFLLK 624
           LG ++LK AL A GLK GGT+++RA+RLF  K
Sbjct: 258 LGLDRLKSALLALGLKCGGTLEERAQRLFSTK 289

>SF3A3_MOUSE (Q9D554) Splicing factor 3A subunit 3 (Spliceosome-associated|
           protein 61) (SAP 61) (SF3a60)
          Length = 501

 Score =  167 bits (423), Expect = 2e-41
 Identities = 92/212 (43%), Positives = 134/212 (63%), Gaps = 9/212 (4%)
 Frame = +1

Query: 16  FPKYYERLKEIRDYHRRNQSARFVSESDDYEELLK--EEPT------IEFTGEEAFGRYL 171
           F ++Y RLK+I+++HR++ +   V  S ++EELLK  E P+      +EFT EE +GRYL
Sbjct: 81  FAEFYNRLKQIKEFHRKHPNEICVPMSVEFEELLKARENPSEEAQNLVEFTDEEGYGRYL 140

Query: 172 DLHELYNEFINSKFGSLLEYSAYVGTFAQTEKIAHNLKATRPYKEYLEHILEYLTSFLYR 351
           DLH+ Y ++IN K    L+Y  Y+  F Q   I    K    YK YLE +LEYL  +  R
Sbjct: 141 DLHDCYLKYINLKASEKLDYITYLSIFDQLFDIPKERKNAE-YKRYLEMLLEYLQDYTDR 199

Query: 352 TEPLQDIEKIFTKLESEFEEQWANGEVPGWENKDSEKESVLHESA-VDLDYYSTVEELVE 528
            +PLQD  ++F K++++FE++W NG  PGW  + S   ++ H  A +DL  +S+ EEL  
Sbjct: 200 VKPLQDQNELFGKIQTDFEKKWDNGTFPGWPKETS--SALTHAGAHLDLSAFSSWEELAS 257

Query: 529 LGPEKLKEALTARGLKGGGTVQQRAERLFLLK 624
           LG ++LK AL A GLK GGT+++RA+RLF  K
Sbjct: 258 LGLDRLKSALLALGLKCGGTLEERAQRLFSTK 289

>NOI_DROME (O46106) Splicing factor 3A subunit 3 (Protein noisette)|
          Length = 503

 Score =  137 bits (344), Expect = 4e-32
 Identities = 76/210 (36%), Positives = 122/210 (58%), Gaps = 7/210 (3%)
 Frame = +1

Query: 16  FPKYYERLKEIRDYHRRNQSARFVSESDDYEELLKE-------EPTIEFTGEEAFGRYLD 174
           F ++Y RLK+I+ +++ + +   V  S +++E+++           +EFT EE  GRYLD
Sbjct: 81  FNEFYARLKQIKQFYKSHPAEVSVPLSVEFDEMIRVYNNPDDMSALVEFTDEEGGGRYLD 140

Query: 175 LHELYNEFINSKFGSLLEYSAYVGTFAQTEKIAHNLKATRPYKEYLEHILEYLTSFLYRT 354
           L+E Y  ++N +    L+Y  Y+ +F     I    K  R Y+ Y+E + +YL  F+ R 
Sbjct: 141 LNECYELYLNLRSVEKLDYITYLMSFDHVFDIPRERK-NREYRIYIETLNDYLHHFILRI 199

Query: 355 EPLQDIEKIFTKLESEFEEQWANGEVPGWENKDSEKESVLHESAVDLDYYSTVEELVELG 534
           +PL D+E    K+E +F+ QW  G  PG+  K++E       + +DL  +S+ EEL  LG
Sbjct: 200 QPLLDLEGELLKVELDFQRQWLMGTFPGFSIKETESALANTGAHLDLSAFSSWEELASLG 259

Query: 535 PEKLKEALTARGLKGGGTVQQRAERLFLLK 624
            ++LK AL A GLK GGT+++RA+RLF  K
Sbjct: 260 LDRLKSALVALGLKCGGTLEERAQRLFSTK 289

>RP34_BPSP1 (P06227) RNA polymerase sigma GP34 factor|
          Length = 197

 Score = 36.6 bits (83), Expect = 0.065
 Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 7/64 (10%)
 Frame = +1

Query: 16  FPKYYERLKEIRDYH-------RRNQSARFVSESDDYEELLKEEPTIEFTGEEAFGRYLD 174
           FP Y +R+ E+R YH       R N       +++D E L  ++   +   EE F R +D
Sbjct: 69  FPYYIKRMLELRTYHHITKYLKRINGETSLYVKNEDGEVLELQDTIADMHAEEIFSRIVD 128

Query: 175 LHEL 186
           LH +
Sbjct: 129 LHSI 132

>VE94_NPVAC (P08161) Early 94 kDa protein|
          Length = 803

 Score = 36.6 bits (83), Expect = 0.065
 Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 11/58 (18%)
 Frame = +1

Query: 103 YEELLKEEPTIEFTGEEA---------FGRYLDLHELYNEFINS--KFGSLLEYSAYV 243
           Y+ LLK+  ++ F G+E          F R L LH+LY E + S  K+ +L EY  YV
Sbjct: 661 YDSLLKQLQSVHFNGQEITFEKCSRLDFNRILSLHKLYIECVKSLNKYPTLEEYQNYV 718

>MSP1_PLAFW (P04933) Merozoite surface protein 1 precursor (Merozoite surface|
           antigens) (PMMSA) (P195)
          Length = 1639

 Score = 36.2 bits (82), Expect = 0.085
 Identities = 34/148 (22%), Positives = 65/148 (43%), Gaps = 10/148 (6%)
 Frame = +1

Query: 49  RDYHRRNQSARFVSESDDYEELLKEEPTIEFTGEEAFGRYLDLHELYNEFINSKFGSLLE 228
           + Y  R++S   +++  +YE+LL E        +  F   +DL   + + +  ++   +E
Sbjct: 472 KSYEDRSKSLNDITK--EYEKLLNE------IYDSKFNNNIDLTN-FEKMMGKRYSYKVE 522

Query: 229 YSAYVGTFAQTEKIAHNLKATRPYKEYLEHILEYLTSFLYRTEPLQDIEKIFTKLESEF- 405
              +  TFA  E   HNL+      +Y+E   +Y    +   + L+  + + +K+E+E  
Sbjct: 523 KLTHHNTFASYENSKHNLEKLTKALKYME---DYSLRNIVVEKELKYYKNLISKIENEIE 579

Query: 406 ---------EEQWANGEVPGWENKDSEK 462
                    EEQ    ++   ENK  EK
Sbjct: 580 TLVENIKKDEEQLFEKKITKDENKPDEK 607

>MSP1_PLAFK (P04932) Merozoite surface protein 1 precursor (Merozoite surface|
           antigens) (PMMSA) (P190)
          Length = 1630

 Score = 36.2 bits (82), Expect = 0.085
 Identities = 34/148 (22%), Positives = 65/148 (43%), Gaps = 10/148 (6%)
 Frame = +1

Query: 49  RDYHRRNQSARFVSESDDYEELLKEEPTIEFTGEEAFGRYLDLHELYNEFINSKFGSLLE 228
           + Y  R++S   +++  +YE+LL E        +  F   +DL   + + +  ++   +E
Sbjct: 463 KSYEDRSKSLNDITK--EYEKLLNE------IYDSKFNNNIDLTN-FEKMMGKRYSYKVE 513

Query: 229 YSAYVGTFAQTEKIAHNLKATRPYKEYLEHILEYLTSFLYRTEPLQDIEKIFTKLESEF- 405
              +  TFA  E   HNL+      +Y+E   +Y    +   + L+  + + +K+E+E  
Sbjct: 514 KLTHHNTFASYENSKHNLEKLTKALKYME---DYSLRNIVVEKELKYYKNLISKIENEIE 570

Query: 406 ---------EEQWANGEVPGWENKDSEK 462
                    EEQ    ++   ENK  EK
Sbjct: 571 TLVENIKKDEEQLFEKKITKDENKPDEK 598

>MAK16_YEAST (P10962) Protein MAK16 (Maintenance of killer protein 16)|
          Length = 306

 Score = 34.3 bits (77), Expect = 0.32
 Identities = 27/115 (23%), Positives = 54/115 (46%), Gaps = 6/115 (5%)
 Frame = +1

Query: 238 YVGTFAQTEKIAHN-----LKATRPYKEYLEHILEYLTSFLYRTEPLQDIEKIFTKLESE 402
           YVG   + ++   N     L A +  K   + +++ L S  Y  +PL   EK++ K+  +
Sbjct: 134 YVGVAPKVKRREQNRERKALVAAKIEKAIEKELMDRLKSGAYGDKPLNVDEKVWKKIMGQ 193

Query: 403 FEEQWANGEVPGWENKDSEKESVLHESAVDLD-YYSTVEELVELGPEKLKEALTA 564
            EE+ +  E   W+ ++   +  +   A D +  Y  V++L +   +  +EA +A
Sbjct: 194 MEEENSQDEEEDWDEEEESDDGEVEYVADDGEGEYVDVDDLEKWLADSDREASSA 248

>YK82_SCHPO (Q9HGP4) Hypothetical bromodomain protein C631.02|
          Length = 727

 Score = 33.1 bits (74), Expect = 0.72
 Identities = 19/55 (34%), Positives = 30/55 (54%)
 Frame = +1

Query: 388 KLESEFEEQWANGEVPGWENKDSEKESVLHESAVDLDYYSTVEELVELGPEKLKE 552
           KLES F++ WAN         D + E+ +  S+V+ DYY    E+ + G E L++
Sbjct: 485 KLESIFQKLWAN-------KPDFDSETYMGMSSVNTDYYYGDNEVFDSGDEFLED 532

>SGT1_ARATH (Q9LSM5) SGT1 protein homolog At5g65490|
          Length = 643

 Score = 32.7 bits (73), Expect = 0.94
 Identities = 31/123 (25%), Positives = 54/123 (43%), Gaps = 13/123 (10%)
 Frame = +1

Query: 214 GSLLEYSAYVGTFAQTEKIAHNLKATRPYKEYLEHILEY--LTSFLYRTE-----PLQDI 372
           G  + +S Y     +       L  ++ YK  +E+  EY   +S   RT      P++ I
Sbjct: 323 GKGISWSKYKDNLEKYGYFEGLLSGSKEYKRLMENAEEYHQKSSSFSRTRDIMSAPVRRI 382

Query: 373 EKIFTKLESEFEEQWANGEVPGWENK------DSEKESVLHESAVDLDYYSTVEELVELG 534
           ++I     SE  + +   EVP  +N       + E  SVL E   ++++Y++ +E    G
Sbjct: 383 DEILALPYSE--DDFKGQEVPASDNDSWLYDGEDELNSVLQERQKEMEFYNSKKERKNKG 440

Query: 535 PEK 543
            EK
Sbjct: 441 KEK 443

>MEU1_SCHPO (Q9UTJ3) Meiotic expression up-regulated protein 1/2|
          Length = 776

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 34/143 (23%), Positives = 59/143 (41%), Gaps = 5/143 (3%)
 Frame = +1

Query: 34  RLKEIRDYHRRNQSARFVSESDDYEELLKEEPTIEFTGEEAFGRYLDLHELYNEFINSKF 213
           R K I+     NQS +   E+   E  LKE   I+   ++   +   +H+L  E  +   
Sbjct: 541 RAKHIQILENTNQSLKKNLENGRAEFRLKEIALIDLANQQIKNQDKTIHDLNTELCSLTL 600

Query: 214 ---GSLLEYSAYVGTFAQTEKIAHNLKATRPYKEYLEHILEYLTS-FLYRTEPLQDIEKI 381
               + +E       F   E + HN K T P   ++ ++  + TS  +++T P +D E +
Sbjct: 601 DYCNTAVERDTL--RFRALEYLDHN-KQTNPLPYHIVYMFSFETSPTVFQTSPEEDKENV 657

Query: 382 FT-KLESEFEEQWANGEVPGWEN 447
              K+         NG + G  N
Sbjct: 658 NNIKISQPRNSLQTNGYIEGMAN 680

>SMCA5_MOUSE (Q91ZW3) SWI/SNF-related matrix-associated actin-dependent regulator|
            of chromatin subfamily A member 5 (EC 3.6.1.-) (Sucrose
            nonfermenting protein 2 homolog) (mSnf2h)
          Length = 1051

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 32/133 (24%), Positives = 53/133 (39%), Gaps = 7/133 (5%)
 Frame = +1

Query: 19   PKYYERLKEIRDYHRRNQSARFVSESD-------DYEELLKEEPTIEFTGEEAFGRYLDL 177
            P+ +E L++   Y+R+    +     D         EE LK +       EE   +   L
Sbjct: 778  PRLFELLEKEILYYRKTIGYKVPRSPDLPNAAQAQKEEQLKIDEAEPLNDEELEEKEKLL 837

Query: 178  HELYNEFINSKFGSLLEYSAYVGTFAQTEKIAHNLKATRPYKEYLEHILEYLTSFLYRTE 357
             + +  +    F   ++ +   G     E IA  ++   P     E ++EY   F  R  
Sbjct: 838  TQGFTNWNKRDFNQFIKANEKWGR-DDIENIAREVEGKTP-----EEVIEYSAVFWERCN 891

Query: 358  PLQDIEKIFTKLE 396
             LQDIEKI  ++E
Sbjct: 892  ELQDIEKIMAQIE 904

>MCA3_MOUSE (Q9D1M4) Eukaryotic translation elongation factor 1 epsilon-1|
           (Multisynthetase complex auxiliary component p18)
           (Elongation factor p18)
          Length = 174

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 25/77 (32%), Positives = 37/77 (48%)
 Frame = -3

Query: 528 LYKLFNSTVVIKVYCRLM*HGFFL*VLILPSRNFAVGPLFFELTFQLCKNLLNILQWFCA 349
           L K  NS +  KVY  L  H   L  ++L    + +     +LT Q  +  LN+ +WFC 
Sbjct: 94  LLKDLNSYLEDKVY--LAGHNITLADILL---YYGLHRFIVDLTVQEKEKYLNVSRWFCH 148

Query: 348 IQK*RQIFQNMLQIFFV 298
           IQ    I Q++  I F+
Sbjct: 149 IQHYPDIRQHLSSIVFI 165

>SMCA1_HUMAN (P28370) Probable global transcription activator SNF2L1 (EC 3.6.1.-)|
            (ATP-dependent helicase SMARCA1) (SWI/SNF-related
            matrix-associated actin-dependent regulator of chromatin
            subfamily A member 1)
          Length = 976

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 31/133 (23%), Positives = 53/133 (39%), Gaps = 7/133 (5%)
 Frame = +1

Query: 19   PKYYERLKEIRDYHRRNQSARFVSESD-------DYEELLKEEPTIEFTGEEAFGRYLDL 177
            P+ +E L++   Y+R+    +     D         EE  K +     T EE   +   L
Sbjct: 716  PRLFELLEKEILYYRKTIGYKVPRNPDIPNPALAQREEQKKIDGAEPLTPEETEEKEKLL 775

Query: 178  HELYNEFINSKFGSLLEYSAYVGTFAQTEKIAHNLKATRPYKEYLEHILEYLTSFLYRTE 357
             + +  +    F   ++ +   G     + IA  ++   P     E ++EY   F  R  
Sbjct: 776  TQGFTNWTKRDFNQFIKANEKYGR-DDIDNIAREVEGKSP-----EEVMEYSAVFWERCN 829

Query: 358  PLQDIEKIFTKLE 396
             LQDIEKI  ++E
Sbjct: 830  ELQDIEKIMAQIE 842

>SIR1_YEAST (P21691) Regulatory protein SIR1 (Silent information regulator 1)|
          Length = 678

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 36/170 (21%), Positives = 78/170 (45%), Gaps = 11/170 (6%)
 Frame = +1

Query: 82  FVSESDDYEELLKEEPTIEFTGEEAFGRYLDLHE---LYNEFINSKFGSLLEYSAYVGTF 252
           F S+++DY  +++E+P +E T       Y D+ +      E +  K  + +     V T 
Sbjct: 302 FKSKNNDYRFIVREKPIVENTISNL--DYSDIKKQQFTEAEVVKRKISADISQIENVHTQ 359

Query: 253 AQTEKIAHNLKATRPYKEYLEHILEY--------LTSFLYRTEPLQDIEKIFTKLESEFE 408
             ++K  +N++  +   E L+ I ++        L S       ++ +E++  +LE    
Sbjct: 360 FNSQKEKNNIRVNKVSSEVLDQISKFPVSRVTLLLMSAGQDKNYIELVEELARRLEKICI 419

Query: 409 EQWANGEVPGWENKDSEKESVLHESAVDLDYYSTVEELVELGPEKLKEAL 558
           E+         E +D+ + +   +++ D +YY ++EE  ++  E +KE L
Sbjct: 420 EKTTQSLE---EIRDTFQANPEMQASFDKEYYQSIEE-YKITLELIKEDL 465

>SMCA5_HUMAN (O60264) SWI/SNF-related matrix-associated actin-dependent regulator|
            of chromatin subfamily A member 5 (EC 3.6.1.-)
            (SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin A5) (Sucrose nonfermenting protein
            2 homolog) (hSNF2
          Length = 1052

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 35/134 (26%), Positives = 55/134 (41%), Gaps = 8/134 (5%)
 Frame = +1

Query: 19   PKYYERL-KEIRDYHR-------RNQSARFVSESDDYEELLKEEPTIEFTGEEAFGRYLD 174
            P+ +E L KEI  Y +       RN      +++   EE LK +       EE   +   
Sbjct: 779  PRLFELLEKEILFYRKTIGYKVPRNPELPNAAQAQK-EEQLKIDEAESLNDEELEEKEKL 837

Query: 175  LHELYNEFINSKFGSLLEYSAYVGTFAQTEKIAHNLKATRPYKEYLEHILEYLTSFLYRT 354
            L + +  +    F   ++ +   G     E IA  ++   P     E ++EY   F  R 
Sbjct: 838  LTQGFTNWNKRDFNQFIKANEKWGR-DDIENIAREVEGKTP-----EEVIEYSAVFWERC 891

Query: 355  EPLQDIEKIFTKLE 396
              LQDIEKI  ++E
Sbjct: 892  NELQDIEKIMAQIE 905

>GRPE_HELPJ (Q9ZMW3) Protein grpE (HSP-70 cofactor)|
          Length = 191

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 15/35 (42%), Positives = 23/35 (65%)
 Frame = +1

Query: 475 HESAVDLDYYSTVEELVELGPEKLKEALTARGLKG 579
           H+SAV++D  S + + +EL  EKL E L   G++G
Sbjct: 103 HKSAVEVDKESALTKGLELTMEKLHEVLARHGIEG 137

>AVEN_MOUSE (Q9D9K3) Cell death regulator Aven|
          Length = 342

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 24/82 (29%), Positives = 37/82 (45%)
 Frame = +1

Query: 283 KATRPYKEYLEHILEYLTSFLYRTEPLQDIEKIFTKLESEFEEQWANGEVPGWENKDSEK 462
           KA  P +   +H+ E L   L+   P+Q+   I     S  +E   +G+V   E    EK
Sbjct: 250 KAPTPTQSVADHLEEELDMLLHLDAPVQEEGIISPDQTSRDQEPEKDGQV-AQEETGPEK 308

Query: 463 ESVLHESAVDLDYYSTVEELVE 528
            SV  E  V+ +  ST + + E
Sbjct: 309 PSVTREKNVEPEQPSTSKNVTE 330

>SYE_BACSU (P22250) Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA|
           ligase) (GluRS)
          Length = 483

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 33/130 (25%), Positives = 55/130 (42%), Gaps = 1/130 (0%)
 Frame = +1

Query: 64  RNQSARFVSESDDYEELLKEEPTIEFTGEEAFGRYLDLHELYNEFINSKFGSLLEYSAYV 243
           RNQ  +F+   +D ++    E      GE++   YL       +++   +   ++     
Sbjct: 33  RNQGGKFIIRVEDTDKKRNIEG-----GEQSQLNYL-------KWLGIDWDESVDVGGEY 80

Query: 244 GTFAQTEKIAHNLKATRPYKEYLEHILEYLTSF-LYRTEPLQDIEKIFTKLESEFEEQWA 420
           G + Q+E+          YK Y E +LE   ++  Y TE          +LE E EEQ A
Sbjct: 81  GPYRQSER-------NDIYKVYYEELLEKGLAYKCYCTEE---------ELEKEREEQIA 124

Query: 421 NGEVPGWENK 450
            GE+P +  K
Sbjct: 125 RGEMPRYSGK 134

>CDC37_CANAL (Q8X1E6) Hsp90 co-chaperone Cdc37 (Hsp90 chaperone protein|
           kinase-targeting subunit) (Cell division control protein
           37)
          Length = 508

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 24/66 (36%), Positives = 36/66 (54%)
 Frame = +1

Query: 304 EYLEHILEYLTSFLYRTEPLQDIEKIFTKLESEFEEQWANGEVPGWENKDSEKESVLHES 483
           E ++++LE LTS    TE L D EK+ +KL SEF+ Q    E   ++    +K S L + 
Sbjct: 64  ERVDYLLEKLTS----TE-LLDSEKVMSKLNSEFDPQ----EKFDYDKLIKDKGSTLRKG 114

Query: 484 AVDLDY 501
             DL +
Sbjct: 115 LKDLKF 120

>MUKB_MANSM (Q65TL9) Chromosome partition protein mukB (Structural maintenance|
           of chromosome-related protein)
          Length = 1499

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 37/155 (23%), Positives = 64/155 (41%), Gaps = 3/155 (1%)
 Frame = +1

Query: 97  DDYEELLKEEPTIEFTGEEAFGRYLDLHELYNEF--INSKFGSLLEYSAYVGTFAQTEKI 270
           D  +ELL+E PT +   ++       LHEL   +    S    L +++   G   +T   
Sbjct: 525 DSAKELLREYPTQKLQAQQTPQLRAKLHELEQRYQQQQSAVKILKDFNQRAGLSLET--- 581

Query: 271 AHNLKATRPYKEYLEHILEYLTS-FLYRTEPLQDIEKIFTKLESEFEEQWANGEVPGWEN 447
           A  L+    Y    E ++E LT+ F  + E    + +   +L + FEE+  +   P W  
Sbjct: 582 ADELE---DYHAEQEALIENLTAEFSEQVETRSTLRQKLEQLTALFEEKARS--APAWIT 636

Query: 448 KDSEKESVLHESAVDLDYYSTVEELVELGPEKLKE 552
             S  E +  +S    +    V   ++   EK +E
Sbjct: 637 AKSALERLTEQSGEQFEDNQDVMNFMQAQLEKERE 671

>MCA3_HUMAN (O43324) Eukaryotic translation elongation factor 1 epsilon-1|
           (Multisynthetase complex auxiliary component p18)
           (Elongation factor p18)
          Length = 174

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 24/77 (31%), Positives = 38/77 (49%)
 Frame = -3

Query: 528 LYKLFNSTVVIKVYCRLM*HGFFL*VLILPSRNFAVGPLFFELTFQLCKNLLNILQWFCA 349
           L K  NS +  KVY  L  + F L  ++L    + +     +LT Q  +  LN+ +WFC 
Sbjct: 94  LLKDLNSYLEDKVY--LTGYNFTLADILL---YYGLHRFIVDLTVQEKEKYLNVSRWFCH 148

Query: 348 IQK*RQIFQNMLQIFFV 298
           IQ    I Q++  + F+
Sbjct: 149 IQHYPGIRQHLSSVVFI 165

>ASB12_HUMAN (Q8WXK4) Ankyrin repeat and SOCS box protein 12 (ASB-12)|
          Length = 309

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 22/69 (31%), Positives = 38/69 (55%)
 Frame = +1

Query: 361 LQDIEKIFTKLESEFEEQWANGEVPGWENKDSEKESVLHESAVDLDYYSTVEELVELGPE 540
           L DI KIF+ L+ + EE          E+ D+E++  L+++  D D Y T+++L  L  E
Sbjct: 3   LMDITKIFSLLQPDKEE----------EDTDTEEKQALNQAVYDNDSY-TLDQL--LRQE 49

Query: 541 KLKEALTAR 567
           + K  + +R
Sbjct: 50  RYKRFINSR 58

>PDE6A_HUMAN (P16499) Rod cGMP-specific 3',5'-cyclic phosphodiesterase|
           alpha-subunit (EC 3.1.4.35) (GMP-PDE alpha) (PDE V-B1)
          Length = 859

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 27/98 (27%), Positives = 40/98 (40%), Gaps = 21/98 (21%)
 Frame = +1

Query: 274 HNLKATRPYKEYLEHILEYLTSFL-----------------YRTEPLQDIEKIFTKLES- 399
           +N K  +P+ E  E ++E LT FL                  R +  QDI K   K ++ 
Sbjct: 403 YNRKDGKPFDEMDETLMESLTQFLGWSVLNPDTYESMNKLENRKDIFQDIVKYHVKCDNE 462

Query: 400 EFEEQWANGEVPG---WENKDSEKESVLHESAVDLDYY 504
           E ++     EV G   WE ++ E   +L     D D Y
Sbjct: 463 EIQKILKTREVYGKEPWECEEEELAEILQAELPDADKY 500

>NEF_FIVPE (P20885) Probable Nef protein (3'ORF) (ORF4)|
          Length = 122

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 16/50 (32%), Positives = 23/50 (46%)
 Frame = +1

Query: 373 EKIFTKLESEFEEQWANGEVPGWENKDSEKESVLHESAVDLDYYSTVEEL 522
           +++ T+LE  F + +      G    DSE E    E  VD D Y   EE+
Sbjct: 67  KRMMTELEDRFRKLFGTTSTTGDSTVDSEDEPPKKEKRVDWDEYWNPEEI 116

>MCA3_CRIGR (P70102) Eukaryotic translation elongation factor 1 epsilon-1|
           (Multisynthetase complex auxiliary component p18)
           (Elongation factor p18)
          Length = 174

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = -3

Query: 405 ELTFQLCKNLLNILQWFCAIQK*RQIFQNMLQIFFV 298
           +LT Q  +  LN+ +WFC IQ    I Q++  + F+
Sbjct: 130 DLTVQEKEKYLNVSRWFCHIQHYPDIRQHLSSVVFI 165

>XYLT2_CANFA (Q5QQ50) Xylosyltransferase 2 (EC 2.4.2.26) (Xylosyltransferase II)|
           (Peptide O-xylosyltransferase 2)
          Length = 865

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
 Frame = +1

Query: 280 LKATRPYKEYLEHILEYLTSFLY--RTEPLQDIEKIFTKLESEFEEQWANGEVPGW 441
           L A  P+ EY+E   + L+  L   + EP ++  +   +L     E W +GE+ G+
Sbjct: 764 LHAGPPHNEYMEQSFQGLSGILNLPQPEPAEEAARRHAELTGPALEAWTDGELSGF 819

>PDE6C_BOVIN (P16586) Cone cGMP-specific 3',5'-cyclic phosphodiesterase|
           alpha'-subunit (EC 3.1.4.35) (cGMP phosphodiesterase 6C)
           (PDE V-C1)
          Length = 855

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 17/42 (40%), Positives = 23/42 (54%)
 Frame = +1

Query: 274 HNLKATRPYKEYLEHILEYLTSFLYRTEPLQDIEKIFTKLES 399
           +N K  +P+ EY EHI E LT FL  +    D  +   KLE+
Sbjct: 401 YNRKDGKPFDEYDEHIAETLTQFLGWSLLNTDTYEKMNKLEN 442

>CAC1S_MOUSE (Q02789) Voltage-dependent L-type calcium channel alpha-1S subunit|
            (Voltage-gated calcium channel alpha subunit Cav1.1)
            (Calcium channel, L type, alpha-1 polypeptide, isoform 3,
            skeletal muscle)
          Length = 1880

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 17/56 (30%), Positives = 28/56 (50%)
 Frame = -1

Query: 461  FSESLFSHPGTSPLAHCSSNSLSSFVKIFSISCNGSVRYRNDVRYSKICSKYSLYG 294
            F E    +PGT PLA  ++N+ ++ V        G+  +RN+  +S IC +    G
Sbjct: 1643 FLEDFPQNPGTHPLARANTNNANANV------AYGNSSHRNNPVFSSICYEREFLG 1692

>TOXR_PSEAE (P09852) Exotoxin A regulatory protein|
          Length = 259

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 18/41 (43%), Positives = 25/41 (60%)
 Frame = -2

Query: 634 RVYASARKVAQHVVEQCRHPSIPEQLEPPSTFLVQALQALQ 512
           R+ ASAR++ QH VE C   +I EQ EP S   + +L  L+
Sbjct: 111 RILASARQLQQHQVELCLLLAIDEQ-EPASAEYLTSLARLR 150


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.314    0.135    0.380 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 88,018,787
Number of Sequences: 219361
Number of extensions: 1758865
Number of successful extensions: 4677
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 4549
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4666
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5995743495
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)