ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags10e19
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_469565.1| Oryza sativa (japonica cultivar-group), mRNA 515 e-143
2dbj|AK069120.1| Oryza sativa (japonica cultivar-group) cDNA clon... 515 e-143
3gb|AY108853.1| Zea mays PCO085330 mRNA sequence 281 1e-72
4gb|BT018484.1| Zea mays clone EL01N0424D05.d mRNA sequence 228 2e-56
5gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 127 5e-26
6dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 127 5e-26
7gb|AC091532.13| Oryza sativa chromosome 3 BAC OSJNBa0078A17 geno... 127 5e-26
8gb|AY664419.1| Zea mays cultivar Mo17 locus 9009, complete sequence 92 3e-15
9gb|AY111053.1| Zea mays CL5619_1 mRNA sequence 80 1e-11
10gb|AC138056.33| Medicago truncatula clone mth2-13i6, complete se... 44 0.56
11gb|AC011848.11| Homo sapiens chromosome 17, clone RP11-354C22, c... 44 0.56
12emb|CR974443.6| M.truncatula DNA sequence from clone MTH2-35O18 ... 44 0.56
13gb|AC124998.10| Mus musculus chromosome 10, clone RP24-350B12, c... 42 2.2
14emb|CR713709.2|CNS0GDND Tetraodon nigroviridis full-length cDNA 42 2.2
15gb|AC109136.1| Homo sapiens chromosome 16 clone RP11-629D22, com... 42 2.2
16emb|AL928701.7| Zebrafish DNA sequence from clone CH211-201H21, ... 42 2.2
17emb|AL808141.8| Zebrafish DNA sequence from clone CH211-260N19, ... 42 2.2
18emb|AL772184.3| Tetraodon DNA sequence from clone XX-C0AA012DF08... 42 2.2
19gb|AY423011.1| Danio rerio kinectin 1 (KTN1) mRNA, complete cds 40 8.7
20gb|AC112633.6| Rattus norvegicus 11 BAC CH230-200K21 (Children's... 40 8.7
21gb|AC140182.2| Mus musculus BAC clone RP24-349I16 from chromosom... 40 8.7
22gb|AC141477.4| Mus musculus BAC clone RP23-386J14 from chromosom... 40 8.7
23ref|NM_200081.1| Danio rerio kinectin 1 (ktn1), mRNA 40 8.7
24gb|BC044389.1| Danio rerio kinectin 1, mRNA (cDNA clone MGC:5540... 40 8.7
25gb|AC123826.4| Mus musculus BAC clone RP24-97K3 from chromosome ... 40 8.7
26gb|AC100092.9| Mus musculus chromosome 3, clone RP23-37H10, comp... 40 8.7
27gb|AC133213.2| Mus musculus chromosome UL clone RP23-60I24, comp... 40 8.7
28emb|Z95397.2|SPBC25H2 S.pombe chromosome II cosmid c25H2 40 8.7
29ref|NM_136694.1| Drosophila melanogaster CG15863-RA (CG15863), mRNA 40 8.7
30dbj|AK146028.1| Mus musculus 14 days pregnant adult female amnio... 40 8.7
31gb|AC007937.18| Mus musculus chromosome 10, clone RP21-536F4, co... 40 8.7
32ref|XM_683235.1| PREDICTED: Danio rerio similar to kinectin 1 (L... 40 8.7
33dbj|AK166167.1| Mus musculus mammary gland RCB-0526 Jyg-MC(A) cD... 40 8.7
34gb|AC158618.5| Mus musculus 10 BAC RP23-280M4 (Roswell Park Canc... 40 8.7
35gb|AC007414.6| Drosophila melanogaster, chromosome 2R, region 46... 40 8.7
36gb|BT023615.1| Drosophila melanogaster IP05962 full insert cDNA 40 8.7
37gb|CP000040.1| Bacillus cereus E33L plasmid pE33L466, complete s... 40 8.7
38emb|BX119996.7| Mouse DNA sequence from clone RP23-352G15 on chr... 40 8.7
39emb|BX465227.3| Zebrafish DNA sequence from clone RP71-40K24 in ... 40 8.7
40gb|AC007413.5|AC007413 Drosophila melanogaster, chromosome 2R, r... 40 8.7
41gb|AE003831.3| Drosophila melanogaster chromosome 2R, section 19... 40 8.7
42gb|CP000102.1| Methanosphaera stadtmanae DSM 3091, complete genome 40 8.7
43emb|AL589681.19| Mouse DNA sequence from clone RP23-438H3 on chr... 40 8.7
44emb|AL627394.15| Mouse DNA sequence from clone RP23-174I9 on chr... 40 8.7 
>ref|XM_469565.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1833

 Score =  515 bits (260), Expect = e-143
 Identities = 544/638 (85%), Gaps = 3/638 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   gtgcaaactgacatcttccccaagtactatgaaaggctgaaagagattcgtgattaccat 60
           |||||| |||| ||||| || |||| |||||| ||||| |||||||| ||||||||||||
Sbjct: 305 gtgcaagctgaaatctttccaaagttctatgacaggctcaaagagatccgtgattaccat 364

                                                                       
Query: 61  agaaggaatcaatctgcccgcttcgtcagtgaaagtgatgattatgaggagctactaaag 120
           ||  | ||||  |||||||| ||||| |||| || ||||||||  || ||||||||||||
Sbjct: 365 aggcgtaatccttctgcccgtttcgttagtgcaactgatgatttcgaagagctactaaag 424

                                                                       
Query: 121 gaggaaccgactattgaattcactggcgaggaagcatttggccggtacttggacttacat 180
           ||||||||| |||||||||||||||| |||||||| |||||||| ||| ||||||| |||
Sbjct: 425 gaggaaccggctattgaattcactggagaggaagcttttggccgatacctggacttgcat 484

                                                                       
Query: 181 gagctctataacgagttcataaattcaaagtttggatcactattggaatactcagcatac 240
           ||||| || || |||||||||||||| ||||||||| | | | |||||||||||||||| 
Sbjct: 485 gagctttacaatgagttcataaattccaagtttggaactccaatggaatactcagcatat 544

                                                                       
Query: 241 gttggcacttttgctcagactgaaaaaattgcacataatctgaaagctaccaggccatac 300
           |||||||| ||| ||||    || || || ||||| ||||||||| |  |||||| ||||
Sbjct: 545 gttggcaccttttctcatgtggagaagatggcacaaaatctgaaaacctccaggcaatac 604

                                                                       
Query: 301 aaagaatatttggagcatattttggaatatctgacgtcatttctgtatcgcacagaacca 360
           | ||||||  |||||||||||||||| |||||||| ||||||||||||| ||||||||||
Sbjct: 605 agagaatacctggagcatattttggagtatctgacatcatttctgtatcacacagaacca 664

                                                                       
Query: 361 ttgcaagatattgagaagatttttacaaagctggaaagtgagttcgaagaacagtgggcc 420
           |||||||| ||||||||||||||| ||||| ||||||| ||||| ||||||||||||  |
Sbjct: 665 ttgcaagacattgagaagatttttgcaaagttggaaagcgagtttgaagaacagtggatc 724

                                                                       
Query: 421 aacggcgaagttcctggatgggagaataaggactcagagaaagaatccgtgttacatgag 480
           || || ||||| |||||||||||||  |||||| ||||||||||||| |    ||| |||
Sbjct: 725 aatggtgaagtgcctggatgggagagcaaggacccagagaaagaatctg---cacaagag 781

                                                                       
Query: 481 tctgcagtagaccttgattactacagtactgttgaagagcttgtagagcttggaccagaa 540
           || | | |||||||||||||||| |  ||||||||||||||||| ||||| || ||||||
Sbjct: 782 tcagtaatagaccttgattactataccactgttgaagagcttgttgagctgggcccagaa 841

                                                                       
Query: 541 aagttgaaggaggctctaactgctcggggattgaagggtggcggcactgttcaacaacgt 600
           |||||||| |||||| || ||||||| ||||| ||  |||| || ||||||||||| |||
Sbjct: 842 aagttgaaagaggctttagctgctcgtggattaaaaagtggtggtactgttcaacagcgt 901

                                                 
Query: 601 gctgagcgacttttcttgctgaagcatacacccttgga 638
           |||||||||||||||||| |||||||||||||||||||
Sbjct: 902 gctgagcgacttttcttgttgaagcatacacccttgga 939
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>dbj|AK069120.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023004K20, full
           insert sequence
          Length = 1891

 Score =  515 bits (260), Expect = e-143
 Identities = 544/638 (85%), Gaps = 3/638 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   gtgcaaactgacatcttccccaagtactatgaaaggctgaaagagattcgtgattaccat 60
           |||||| |||| ||||| || |||| |||||| ||||| |||||||| ||||||||||||
Sbjct: 363 gtgcaagctgaaatctttccaaagttctatgacaggctcaaagagatccgtgattaccat 422

                                                                       
Query: 61  agaaggaatcaatctgcccgcttcgtcagtgaaagtgatgattatgaggagctactaaag 120
           ||  | ||||  |||||||| ||||| |||| || ||||||||  || ||||||||||||
Sbjct: 423 aggcgtaatccttctgcccgtttcgttagtgcaactgatgatttcgaagagctactaaag 482

                                                                       
Query: 121 gaggaaccgactattgaattcactggcgaggaagcatttggccggtacttggacttacat 180
           ||||||||| |||||||||||||||| |||||||| |||||||| ||| ||||||| |||
Sbjct: 483 gaggaaccggctattgaattcactggagaggaagcttttggccgatacctggacttgcat 542

                                                                       
Query: 181 gagctctataacgagttcataaattcaaagtttggatcactattggaatactcagcatac 240
           ||||| || || |||||||||||||| ||||||||| | | | |||||||||||||||| 
Sbjct: 543 gagctttacaatgagttcataaattccaagtttggaactccaatggaatactcagcatat 602

                                                                       
Query: 241 gttggcacttttgctcagactgaaaaaattgcacataatctgaaagctaccaggccatac 300
           |||||||| ||| ||||    || || || ||||| ||||||||| |  |||||| ||||
Sbjct: 603 gttggcaccttttctcatgtggagaagatggcacaaaatctgaaaacctccaggcaatac 662

                                                                       
Query: 301 aaagaatatttggagcatattttggaatatctgacgtcatttctgtatcgcacagaacca 360
           | ||||||  |||||||||||||||| |||||||| ||||||||||||| ||||||||||
Sbjct: 663 agagaatacctggagcatattttggagtatctgacatcatttctgtatcacacagaacca 722

                                                                       
Query: 361 ttgcaagatattgagaagatttttacaaagctggaaagtgagttcgaagaacagtgggcc 420
           |||||||| ||||||||||||||| ||||| ||||||| ||||| ||||||||||||  |
Sbjct: 723 ttgcaagacattgagaagatttttgcaaagttggaaagcgagtttgaagaacagtggatc 782

                                                                       
Query: 421 aacggcgaagttcctggatgggagaataaggactcagagaaagaatccgtgttacatgag 480
           || || ||||| |||||||||||||  |||||| ||||||||||||| |    ||| |||
Sbjct: 783 aatggtgaagtgcctggatgggagagcaaggacccagagaaagaatctg---cacaagag 839

                                                                       
Query: 481 tctgcagtagaccttgattactacagtactgttgaagagcttgtagagcttggaccagaa 540
           || | | |||||||||||||||| |  ||||||||||||||||| ||||| || ||||||
Sbjct: 840 tcagtaatagaccttgattactataccactgttgaagagcttgttgagctgggcccagaa 899

                                                                       
Query: 541 aagttgaaggaggctctaactgctcggggattgaagggtggcggcactgttcaacaacgt 600
           |||||||| |||||| || ||||||| ||||| ||  |||| || ||||||||||| |||
Sbjct: 900 aagttgaaagaggctttagctgctcgtggattaaaaagtggtggtactgttcaacagcgt 959

                                                 
Query: 601 gctgagcgacttttcttgctgaagcatacacccttgga 638
           |||||||||||||||||| |||||||||||||||||||
Sbjct: 960 gctgagcgacttttcttgttgaagcatacacccttgga 997
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>gb|AY108853.1| Zea mays PCO085330 mRNA sequence
          Length = 901

 Score =  281 bits (142), Expect = 1e-72
 Identities = 337/402 (83%)
 Strand = Plus / Plus

                                                                       
Query: 21  caagtactatgaaaggctgaaagagattcgtgattaccatagaaggaatcaatctgcccg 80
           |||||||||||||||||| |||||||| ||||| || ||| |  |||| | |||||||||
Sbjct: 448 caagtactatgaaaggctcaaagagatccgtgaatatcatcggcggaacccatctgcccg 507

                                                                       
Query: 81  cttcgtcagtgaaagtgatgattatgaggagctactaaaggaggaaccgactattgaatt 140
           ||| || |||  || |||||| ||||| ||||| ||||||||||||||   |||||||||
Sbjct: 508 ctttgttagtacaactgatgactatgaagagcttctaaaggaggaaccagttattgaatt 567

                                                                       
Query: 141 cactggcgaggaagcatttggccggtacttggacttacatgagctctataacgagttcat 200
           ||||||||||||| | |||||||| ||| | ||||| |||||||| ||||| ||||||||
Sbjct: 568 cactggcgaggaaacttttggccgttaccttgacttgcatgagctttataatgagttcat 627

                                                                       
Query: 201 aaattcaaagtttggatcactattggaatactcagcatacgttggcacttttgctcagac 260
           |||||| ||||| ||| ||||  ||||||| ||||| || ||||||  |||  | |||||
Sbjct: 628 aaattccaagttcggaacactgatggaatattcagcttatgttggctgtttctcccagac 687

                                                                       
Query: 261 tgaaaaaattgcacataatctgaaagctaccaggccatacaaagaatatttggagcatat 320
            || || ||  |||||| ||  |||||||||||   ||||| |||||| ||||| |||||
Sbjct: 688 ggacaagatctcacatagtcataaagctaccagaaaatacagagaatacttggaacatat 747

                                                                       
Query: 321 tttggaatatctgacgtcatttctgtatcgcacagaaccattgcaagatattgagaagat 380
           ||||||||||||||| |||||||||||||||||||| ||||||||||| ||||| |||||
Sbjct: 748 tttggaatatctgacatcatttctgtatcgcacagagccattgcaagacattgataagat 807

                                                     
Query: 381 ttttacaaagctggaaagtgagttcgaagaacagtgggccaa 422
           ||||  ||||||||| ||||| ||||| ||||| ||||||||
Sbjct: 808 ttttttaaagctggagagtgaattcgaggaacaatgggccaa 849
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>gb|BT018484.1| Zea mays clone EL01N0424D05.d mRNA sequence
          Length = 1383

 Score =  228 bits (115), Expect = 2e-56
 Identities = 292/351 (83%)
 Strand = Plus / Plus

                                                                       
Query: 72  atctgcccgcttcgtcagtgaaagtgatgattatgaggagctactaaaggaggaaccgac 131
           |||||||||||| || |||  || |||||| ||||| ||||| ||||||||||||||   
Sbjct: 13  atctgcccgctttgttagtacaactgatgactatgaagagcttctaaaggaggaaccagt 72

                                                                       
Query: 132 tattgaattcactggcgaggaagcatttggccggtacttggacttacatgagctctataa 191
           |||||||||||||||||||||| | |||||||| ||| | ||||| |||||||| |||||
Sbjct: 73  tattgaattcactggcgaggaaacttttggccgttaccttgacttgcatgagctttataa 132

                                                                       
Query: 192 cgagttcataaattcaaagtttggatcactattggaatactcagcatacgttggcacttt 251
            |||||||| ||||| ||| | ||| ||||  ||||||| ||||| || ||||||  |||
Sbjct: 133 tgagttcattaattccaaggtgggaacactgatggaatattcagcttatgttggctgttt 192

                                                                       
Query: 252 tgctcagactgaaaaaattgcacataatctgaaagctaccaggccatacaaagaatattt 311
             | ||||| || || ||  |||||| ||  |||||||||||   ||||| |||||| ||
Sbjct: 193 ctcccagacggacaagatctcacatagtcataaagctaccagaaaatacagagaatactt 252

                                                                       
Query: 312 ggagcatattttggaatatctgacgtcatttctgtatcgcacagaaccattgcaagatat 371
           ||| |||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||
Sbjct: 253 ggaacatattttggaatatctgacatcatttctgtatcgcacagagccattgcaagacat 312

                                                              
Query: 372 tgagaagatttttacaaagctggaaagtgagttcgaagaacagtgggccaa 422
           ||| |||||||||  ||||||||| ||||| ||||| ||||  ||||||||
Sbjct: 313 tgataagatttttttaaagctggagagtgaattcgaggaacgatgggccaa 363



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 119/143 (83%), Gaps = 2/143 (1%)
 Strand = Plus / Plus

                                                                       
Query: 496 gattactacagtactgttgaagagcttgtagagcttggaccagaaaagttgaaggaggct 555
           ||||||||||| || | |||||| ||||| |||||||| |||||||| ||  |  |||||
Sbjct: 422 gattactacagcacaggtgaagaacttgttgagcttggcccagaaaactttta--aggct 479

                                                                       
Query: 556 ctaactgctcggggattgaagggtggcggcactgttcaacaacgtgctgagcgacttttc 615
            || ||||||| || |||||| ||||||||||||||||||| ||||| || || ||||||
Sbjct: 480 ttagctgctcgaggtttgaagagtggcggcactgttcaacagcgtgcagatcgtcttttc 539

                                  
Query: 616 ttgctgaagcatacacccttgga 638
           ||| |||||  |||||| |||||
Sbjct: 540 ttgttgaaggttacaccgttgga 562
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  127 bits (64), Expect = 5e-26
 Identities = 91/100 (91%)
 Strand = Plus / Minus

                                                                            
Query: 291      caggccatacaaagaatatttggagcatattttggaatatctgacgtcatttctgtatcg 350
                ||||| ||||| ||||||  |||||||||||||||| |||||||| ||||||||||||| 
Sbjct: 28747967 caggcaatacagagaatacctggagcatattttggagtatctgacatcatttctgtatca 28747908

                                                        
Query: 351      cacagaaccattgcaagatattgagaagatttttacaaag 390
                |||||||||||||||||| ||||||||||||||| |||||
Sbjct: 28747907 cacagaaccattgcaagacattgagaagatttttgcaaag 28747868



 Score =  111 bits (56), Expect = 3e-21
 Identities = 136/162 (83%), Gaps = 3/162 (1%)
 Strand = Plus / Minus

                                                                            
Query: 392      tggaaagtgagttcgaagaacagtgggccaacggcgaagttcctggatgggagaataagg 451
                ||||||| ||||| ||||||||||||  ||| || ||||| |||||||||||||  ||||
Sbjct: 28747617 tggaaagcgagtttgaagaacagtggatcaatggtgaagtgcctggatgggagagcaagg 28747558

                                                                            
Query: 452      actcagagaaagaatccgtgttacatgagtctgcagtagaccttgattactacagtactg 511
                || ||||||||||||| |    ||| ||||| | | |||||||||||||||| |  ||||
Sbjct: 28747557 acccagagaaagaatctgc---acaagagtcagtaatagaccttgattactataccactg 28747501

                                                          
Query: 512      ttgaagagcttgtagagcttggaccagaaaagttgaaggagg 553
                ||||||||||||| ||||| || |||||||||||||| ||||
Sbjct: 28747500 ttgaagagcttgttgagctgggcccagaaaagttgaaagagg 28747459



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 94/109 (86%)
 Strand = Plus / Minus

                                                                            
Query: 149      aggaagcatttggccggtacttggacttacatgagctctataacgagttcataaattcaa 208
                ||||||| |||||||| ||| ||||||| |||||||| || || |||||||||||||| |
Sbjct: 28748444 aggaagcttttggccgatacctggacttgcatgagctttacaatgagttcataaattcca 28748385

                                                                 
Query: 209      agtttggatcactattggaatactcagcatacgttggcacttttgctca 257
                |||||||| | | | |||||||||||||||| |||||||| ||| ||||
Sbjct: 28748384 agtttggaactccaatggaatactcagcatatgttggcaccttttctca 28748336



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 93/108 (86%)
 Strand = Plus / Minus

                                                                            
Query: 44       agattcgtgattaccatagaaggaatcaatctgcccgcttcgtcagtgaaagtgatgatt 103
                |||| ||||||||||||||  | ||||  |||||||| ||||| |||| || ||||||||
Sbjct: 28749216 agatccgtgattaccataggcgtaatccttctgcccgtttcgttagtgcaactgatgatt 28749157

                                                                
Query: 104      atgaggagctactaaaggaggaaccgactattgaattcactggcgagg 151
                  || ||||||||||||||||||||| |||||||||||||||| ||||
Sbjct: 28749156 tcgaagagctactaaaggaggaaccggctattgaattcactggagagg 28749109



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 64/74 (86%)
 Strand = Plus / Minus

                                                                            
Query: 551      aggctctaactgctcggggattgaagggtggcggcactgttcaacaacgtgctgagcgac 610
                ||||| || ||||||| ||||| ||  |||| || ||||||||||| |||||||||||||
Sbjct: 28747357 aggctttagctgctcgtggattaaaaagtggtggtactgttcaacagcgtgctgagcgac 28747298

                              
Query: 611      ttttcttgctgaag 624
                |||||||| |||||
Sbjct: 28747297 ttttcttgttgaag 28747284
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  127 bits (64), Expect = 5e-26
 Identities = 91/100 (91%)
 Strand = Plus / Minus

                                                                            
Query: 291      caggccatacaaagaatatttggagcatattttggaatatctgacgtcatttctgtatcg 350
                ||||| ||||| ||||||  |||||||||||||||| |||||||| ||||||||||||| 
Sbjct: 28839291 caggcaatacagagaatacctggagcatattttggagtatctgacatcatttctgtatca 28839232

                                                        
Query: 351      cacagaaccattgcaagatattgagaagatttttacaaag 390
                |||||||||||||||||| ||||||||||||||| |||||
Sbjct: 28839231 cacagaaccattgcaagacattgagaagatttttgcaaag 28839192



 Score =  111 bits (56), Expect = 3e-21
 Identities = 136/162 (83%), Gaps = 3/162 (1%)
 Strand = Plus / Minus

                                                                            
Query: 392      tggaaagtgagttcgaagaacagtgggccaacggcgaagttcctggatgggagaataagg 451
                ||||||| ||||| ||||||||||||  ||| || ||||| |||||||||||||  ||||
Sbjct: 28838941 tggaaagcgagtttgaagaacagtggatcaatggtgaagtgcctggatgggagagcaagg 28838882

                                                                            
Query: 452      actcagagaaagaatccgtgttacatgagtctgcagtagaccttgattactacagtactg 511
                || ||||||||||||| |    ||| ||||| | | |||||||||||||||| |  ||||
Sbjct: 28838881 acccagagaaagaatctgc---acaagagtcagtaatagaccttgattactataccactg 28838825

                                                          
Query: 512      ttgaagagcttgtagagcttggaccagaaaagttgaaggagg 553
                ||||||||||||| ||||| || |||||||||||||| ||||
Sbjct: 28838824 ttgaagagcttgttgagctgggcccagaaaagttgaaagagg 28838783



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 94/109 (86%)
 Strand = Plus / Minus

                                                                            
Query: 149      aggaagcatttggccggtacttggacttacatgagctctataacgagttcataaattcaa 208
                ||||||| |||||||| ||| ||||||| |||||||| || || |||||||||||||| |
Sbjct: 28839768 aggaagcttttggccgatacctggacttgcatgagctttacaatgagttcataaattcca 28839709

                                                                 
Query: 209      agtttggatcactattggaatactcagcatacgttggcacttttgctca 257
                |||||||| | | | |||||||||||||||| |||||||| ||| ||||
Sbjct: 28839708 agtttggaactccaatggaatactcagcatatgttggcaccttttctca 28839660



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 93/108 (86%)
 Strand = Plus / Minus

                                                                            
Query: 44       agattcgtgattaccatagaaggaatcaatctgcccgcttcgtcagtgaaagtgatgatt 103
                |||| ||||||||||||||  | ||||  |||||||| ||||| |||| || ||||||||
Sbjct: 28840540 agatccgtgattaccataggcgtaatccttctgcccgtttcgttagtgcaactgatgatt 28840481

                                                                
Query: 104      atgaggagctactaaaggaggaaccgactattgaattcactggcgagg 151
                  || ||||||||||||||||||||| |||||||||||||||| ||||
Sbjct: 28840480 tcgaagagctactaaaggaggaaccggctattgaattcactggagagg 28840433



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 64/74 (86%)
 Strand = Plus / Minus

                                                                            
Query: 551      aggctctaactgctcggggattgaagggtggcggcactgttcaacaacgtgctgagcgac 610
                ||||| || ||||||| ||||| ||  |||| || ||||||||||| |||||||||||||
Sbjct: 28838681 aggctttagctgctcgtggattaaaaagtggtggtactgttcaacagcgtgctgagcgac 28838622

                              
Query: 611      ttttcttgctgaag 624
                |||||||| |||||
Sbjct: 28838621 ttttcttgttgaag 28838608
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>gb|AC091532.13| Oryza sativa chromosome 3 BAC OSJNBa0078A17 genomic sequence, complete
             sequence
          Length = 147344

 Score =  127 bits (64), Expect = 5e-26
 Identities = 91/100 (91%)
 Strand = Plus / Minus

                                                                         
Query: 291   caggccatacaaagaatatttggagcatattttggaatatctgacgtcatttctgtatcg 350
             ||||| ||||| ||||||  |||||||||||||||| |||||||| ||||||||||||| 
Sbjct: 54948 caggcaatacagagaatacctggagcatattttggagtatctgacatcatttctgtatca 54889

                                                     
Query: 351   cacagaaccattgcaagatattgagaagatttttacaaag 390
             |||||||||||||||||| ||||||||||||||| |||||
Sbjct: 54888 cacagaaccattgcaagacattgagaagatttttgcaaag 54849



 Score =  111 bits (56), Expect = 3e-21
 Identities = 136/162 (83%), Gaps = 3/162 (1%)
 Strand = Plus / Minus

                                                                         
Query: 392   tggaaagtgagttcgaagaacagtgggccaacggcgaagttcctggatgggagaataagg 451
             ||||||| ||||| ||||||||||||  ||| || ||||| |||||||||||||  ||||
Sbjct: 54598 tggaaagcgagtttgaagaacagtggatcaatggtgaagtgcctggatgggagagcaagg 54539

                                                                         
Query: 452   actcagagaaagaatccgtgttacatgagtctgcagtagaccttgattactacagtactg 511
             || ||||||||||||| |    ||| ||||| | | |||||||||||||||| |  ||||
Sbjct: 54538 acccagagaaagaatctgc---acaagagtcagtaatagaccttgattactataccactg 54482

                                                       
Query: 512   ttgaagagcttgtagagcttggaccagaaaagttgaaggagg 553
             ||||||||||||| ||||| || |||||||||||||| ||||
Sbjct: 54481 ttgaagagcttgttgagctgggcccagaaaagttgaaagagg 54440



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 94/109 (86%)
 Strand = Plus / Minus

                                                                         
Query: 149   aggaagcatttggccggtacttggacttacatgagctctataacgagttcataaattcaa 208
             ||||||| |||||||| ||| ||||||| |||||||| || || |||||||||||||| |
Sbjct: 55425 aggaagcttttggccgatacctggacttgcatgagctttacaatgagttcataaattcca 55366

                                                              
Query: 209   agtttggatcactattggaatactcagcatacgttggcacttttgctca 257
             |||||||| | | | |||||||||||||||| |||||||| ||| ||||
Sbjct: 55365 agtttggaactccaatggaatactcagcatatgttggcaccttttctca 55317



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 93/108 (86%)
 Strand = Plus / Minus

                                                                         
Query: 44    agattcgtgattaccatagaaggaatcaatctgcccgcttcgtcagtgaaagtgatgatt 103
             |||| ||||||||||||||  | ||||  |||||||| ||||| |||| || ||||||||
Sbjct: 56197 agatccgtgattaccataggcgtaatccttctgcccgtttcgttagtgcaactgatgatt 56138

                                                             
Query: 104   atgaggagctactaaaggaggaaccgactattgaattcactggcgagg 151
               || ||||||||||||||||||||| |||||||||||||||| ||||
Sbjct: 56137 tcgaagagctactaaaggaggaaccggctattgaattcactggagagg 56090



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 64/74 (86%)
 Strand = Plus / Minus

                                                                         
Query: 551   aggctctaactgctcggggattgaagggtggcggcactgttcaacaacgtgctgagcgac 610
             ||||| || ||||||| ||||| ||  |||| || ||||||||||| |||||||||||||
Sbjct: 54338 aggctttagctgctcgtggattaaaaagtggtggtactgttcaacagcgtgctgagcgac 54279

                           
Query: 611   ttttcttgctgaag 624
             |||||||| |||||
Sbjct: 54278 ttttcttgttgaag 54265
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>gb|AY664419.1| Zea mays cultivar Mo17 locus 9009, complete sequence
          Length = 405672

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 61/66 (92%)
 Strand = Plus / Minus

                                                                          
Query: 303    agaatatttggagcatattttggaatatctgacgtcatttctgtatcgcacagaaccatt 362
              |||||| ||||| || ||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 110577 agaatacttggaacacattttggaatatctgacatcatttctgtatcgcacagagccatt 110518

                    
Query: 363    gcaaga 368
              ||||||
Sbjct: 110517 gcaaga 110512



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 56/62 (90%)
 Strand = Plus / Minus

                                                                          
Query: 172    gacttacatgagctctataacgagttcataaattcaaagtttggatcactattggaatac 231
              ||||| |||||||| |||||||||||||||||||| ||||||||| | ||| ||||||||
Sbjct: 111128 gacttgcatgagctttataacgagttcataaattccaagtttggaacgctaatggaatac 111069

                
Query: 232    tc 233
              ||
Sbjct: 111068 tc 111067
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>gb|AY111053.1| Zea mays CL5619_1 mRNA sequence
          Length = 998

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 116/143 (81%)
 Strand = Plus / Plus

                                                                       
Query: 496 gattactacagtactgttgaagagcttgtagagcttggaccagaaaagttgaaggaggct 555
           ||||||||||| || |||||||| ||||| |||||||| ||||     || ||  |||||
Sbjct: 15  gattactacagcacagttgaagaacttgttgagcttggcccagnnnnnttaaaacaggct 74

                                                                       
Query: 556 ctaactgctcggggattgaagggtggcggcactgttcaacaacgtgctgagcgacttttc 615
            || ||||||| || |||||| ||||||| ||||||||||| ||||| || || ||||||
Sbjct: 75  ttagctgctcgaggtttgaagagtggcggtactgttcaacagcgtgcagatcgtcttttc 134

                                  
Query: 616 ttgctgaagcatacacccttgga 638
           ||| |||||  |||||| |||||
Sbjct: 135 ttgttgaaggttacaccgttgga 157
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>gb|AC138056.33| Medicago truncatula clone mth2-13i6, complete sequence
          Length = 157258

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 493    cttgattactacagtactgttgaagagctt 522
              |||||||| |||||||| ||||||||||||
Sbjct: 147388 cttgattattacagtacagttgaagagctt 147359
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>gb|AC011848.11| Homo sapiens chromosome 17, clone RP11-354C22, complete sequence
          Length = 163577

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 301    aaagaatatttggagcatattt 322
              ||||||||||||||||||||||
Sbjct: 106467 aaagaatatttggagcatattt 106446
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>emb|CR974443.6| M.truncatula DNA sequence from clone MTH2-35O18 on chromosome 3,
             complete sequence
          Length = 115456

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 493   cttgattactacagtactgttgaagagctt 522
             |||||||| |||||||| ||||||||||||
Sbjct: 69362 cttgattattacagtacagttgaagagctt 69333
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>gb|AC124998.10| Mus musculus chromosome 10, clone RP24-350B12, complete sequence
          Length = 185801

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 26     actatgaaaggctgaaagaga 46
              |||||||||||||||||||||
Sbjct: 112782 actatgaaaggctgaaagaga 112802
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>emb|CR713709.2|CNS0GDND Tetraodon nigroviridis full-length cDNA
          Length = 1145

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 196 ttcataaattcaaagtttggatcac 220
           ||||||||| |||||||||||||||
Sbjct: 501 ttcataaatgcaaagtttggatcac 477
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>gb|AC109136.1| Homo sapiens chromosome 16 clone RP11-629D22, complete sequence
          Length = 183080

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 242   ttggcacttttgctcagactg 262
             |||||||||||||||||||||
Sbjct: 83495 ttggcacttttgctcagactg 83515
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>emb|AL928701.7| Zebrafish DNA sequence from clone CH211-201H21, complete sequence
          Length = 188745

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 351    cacagaaccattgcaagatat 371
              |||||||||||||||||||||
Sbjct: 115963 cacagaaccattgcaagatat 115943
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>emb|AL808141.8| Zebrafish DNA sequence from clone CH211-260N19, complete sequence
          Length = 147111

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 351    cacagaaccattgcaagatat 371
              |||||||||||||||||||||
Sbjct: 109989 cacagaaccattgcaagatat 109969
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>emb|AL772184.3| Tetraodon DNA sequence from clone XX-C0AA012DF08, complete sequence
          Length = 69520

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 196   ttcataaattcaaagtttggatcac 220
             ||||||||| |||||||||||||||
Sbjct: 45773 ttcataaatgcaaagtttggatcac 45749
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>gb|AY423011.1| Danio rerio kinectin 1 (KTN1) mRNA, complete cds
          Length = 4318

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 536  cagaaaagttgaaggaggct 555
            ||||||||||||||||||||
Sbjct: 3160 cagaaaagttgaaggaggct 3179
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>gb|AC112633.6| Rattus norvegicus 11 BAC CH230-200K21 (Children's Hospital Oakland
           Research Institute) complete sequence
          Length = 230130

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 1   gtgcaaactgacatcttccc 20
           ||||||||||||||||||||
Sbjct: 606 gtgcaaactgacatcttccc 587
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>gb|AC140182.2| Mus musculus BAC clone RP24-349I16 from chromosome 8, complete sequence
          Length = 151221

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 249   ttttgctcagactgaaaaaa 268
             ||||||||||||||||||||
Sbjct: 67905 ttttgctcagactgaaaaaa 67924
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>gb|AC141477.4| Mus musculus BAC clone RP23-386J14 from chromosome 10, complete sequence
          Length = 213720

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 289    accaggccatacaaagaata 308
              ||||||||||||||||||||
Sbjct: 178622 accaggccatacaaagaata 178641
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>ref|NM_200081.1| Danio rerio kinectin 1 (ktn1), mRNA
          Length = 4318

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 536  cagaaaagttgaaggaggct 555
            ||||||||||||||||||||
Sbjct: 3160 cagaaaagttgaaggaggct 3179
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>gb|BC044389.1| Danio rerio kinectin 1, mRNA (cDNA clone MGC:55401 IMAGE:2602403),
            complete cds
          Length = 4458

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 536  cagaaaagttgaaggaggct 555
            ||||||||||||||||||||
Sbjct: 3174 cagaaaagttgaaggaggct 3193
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>gb|AC123826.4| Mus musculus BAC clone RP24-97K3 from chromosome 8, complete sequence
          Length = 188704

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 249   ttttgctcagactgaaaaaa 268
             ||||||||||||||||||||
Sbjct: 11109 ttttgctcagactgaaaaaa 11128
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>gb|AC100092.9| Mus musculus chromosome 3, clone RP23-37H10, complete sequence
          Length = 186799

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 301    aaagaatatttggagcatat 320
              ||||||||||||||||||||
Sbjct: 131158 aaagaatatttggagcatat 131139
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>gb|AC133213.2| Mus musculus chromosome UL clone RP23-60I24, complete sequence
          Length = 150628

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 330   tctgacgtcatttctgtatc 349
             ||||||||||||||||||||
Sbjct: 26171 tctgacgtcatttctgtatc 26190
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>emb|Z95397.2|SPBC25H2 S.pombe chromosome II cosmid c25H2
          Length = 38585

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 202   aattcaaagtttggatcact 221
             ||||||||||||||||||||
Sbjct: 18657 aattcaaagtttggatcact 18676
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>ref|NM_136694.1| Drosophila melanogaster CG15863-RA (CG15863), mRNA
          Length = 399

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 207 aaagtttggatcactattgg 226
           ||||||||||||||||||||
Sbjct: 160 aaagtttggatcactattgg 179
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>dbj|AK146028.1| Mus musculus 14 days pregnant adult female amnion cDNA, RIKEN
            full-length enriched library, clone:I530025B16
            product:Hypothetical SPla and the RYanodine receptor,
            full insert sequence
          Length = 3093

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 249  ttttgctcagactgaaaaaa 268
            ||||||||||||||||||||
Sbjct: 1573 ttttgctcagactgaaaaaa 1592
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>gb|AC007937.18| Mus musculus chromosome 10, clone RP21-536F4, complete sequence
          Length = 205015

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 289    accaggccatacaaagaata 308
              ||||||||||||||||||||
Sbjct: 197907 accaggccatacaaagaata 197888
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>ref|XM_683235.1| PREDICTED: Danio rerio similar to kinectin 1 (LOC559847), mRNA
          Length = 2818

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 536  cagaaaagttgaaggaggct 555
            ||||||||||||||||||||
Sbjct: 1349 cagaaaagttgaaggaggct 1368
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>dbj|AK166167.1| Mus musculus mammary gland RCB-0526 Jyg-MC(A) cDNA, RIKEN full-length
            enriched library, clone:G830002H19 product:Hypothetical
            SPla and the RYanodine receptor, full insert sequence
          Length = 3092

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 249  ttttgctcagactgaaaaaa 268
            ||||||||||||||||||||
Sbjct: 1584 ttttgctcagactgaaaaaa 1603
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>gb|AC158618.5| Mus musculus 10 BAC RP23-280M4 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 235639

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 289    accaggccatacaaagaata 308
              ||||||||||||||||||||
Sbjct: 172426 accaggccatacaaagaata 172407
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>gb|AC007414.6| Drosophila melanogaster, chromosome 2R, region 46C-46D, BAC clone
             BACR06J01, complete sequence
          Length = 172904

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 207   aaagtttggatcactattgg 226
             ||||||||||||||||||||
Sbjct: 14359 aaagtttggatcactattgg 14340
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>gb|BT023615.1| Drosophila melanogaster IP05962 full insert cDNA
          Length = 550

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 207 aaagtttggatcactattgg 226
           ||||||||||||||||||||
Sbjct: 183 aaagtttggatcactattgg 202
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>gb|CP000040.1| Bacillus cereus E33L plasmid pE33L466, complete sequence
          Length = 466370

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 373    gagaagatttttacaaagct 392
              ||||||||||||||||||||
Sbjct: 445353 gagaagatttttacaaagct 445372
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>emb|BX119996.7| Mouse DNA sequence from clone RP23-352G15 on chromosome X, complete
             sequence
          Length = 191635

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 330   tctgacgtcatttctgtatc 349
             ||||||||||||||||||||
Sbjct: 22309 tctgacgtcatttctgtatc 22328
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>emb|BX465227.3| Zebrafish DNA sequence from clone RP71-40K24 in linkage group 17,
             complete sequence
          Length = 161395

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 536   cagaaaagttgaaggaggct 555
             ||||||||||||||||||||
Sbjct: 25070 cagaaaagttgaaggaggct 25051
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>gb|AC007413.5|AC007413 Drosophila melanogaster, chromosome 2R, region 46C-46D, BAC clone
              BACR01L01, complete sequence
          Length = 160301

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 207    aaagtttggatcactattgg 226
              ||||||||||||||||||||
Sbjct: 125806 aaagtttggatcactattgg 125787
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>gb|AE003831.3| Drosophila melanogaster chromosome 2R, section 19 of 73 of the complete
              sequence
          Length = 275390

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 207    aaagtttggatcactattgg 226
              ||||||||||||||||||||
Sbjct: 111652 aaagtttggatcactattgg 111633
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>gb|CP000102.1| Methanosphaera stadtmanae DSM 3091, complete genome
          Length = 1767403

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 305     aatatttggagcatattttg 324
               ||||||||||||||||||||
Sbjct: 1026572 aatatttggagcatattttg 1026591
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>emb|AL589681.19| Mouse DNA sequence from clone RP23-438H3 on chromosome X, complete
             sequence
          Length = 189622

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 356   aaccattgcaagatattgagaaga 379
             |||||||| |||||||||||||||
Sbjct: 68809 aaccattggaagatattgagaaga 68832
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>emb|AL627394.15| Mouse DNA sequence from clone RP23-174I9 on chromosome 4, complete
             sequence
          Length = 116283

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 376   aagatttttacaaagctgga 395
             ||||||||||||||||||||
Sbjct: 48065 aagatttttacaaagctgga 48084


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,835,720
Number of Sequences: 3902068
Number of extensions: 5835720
Number of successful extensions: 107391
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 107206
Number of HSP's gapped (non-prelim): 181
length of query: 638
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 615
effective length of database: 17,143,297,704
effective search space: 10543128087960
effective search space used: 10543128087960
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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