ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags10e13 |
|---|---|
| Clone Library Name | barley_pub |
>ARD1H_MOUSE (Q9QY36) N-terminal acetyltransferase complex ARD1 subunit homolog| A (EC 2.3.1.88) (EC 2.3.1.-) Length = 235 Score = 211 bits (537), Expect = 2e-54 Identities = 100/145 (68%), Positives = 120/145 (82%) Frame = +3 Query: 9 DDLLAMQACNLMCLPENYQMKYYFYHMLSWPQLLFVAEDYGGRIVGYVLAKMEEDPSEPC 188 +DL+ MQ CNL+CLPENYQMKYYFYH LSWPQL ++AED G+IVGYVLAKMEEDP + Sbjct: 9 EDLMNMQHCNLLCLPENYQMKYYFYHGLSWPQLSYIAEDENGKIVGYVLAKMEEDPDDVP 68 Query: 189 HGHITSLAVLRSHRKLGLATKLMSAAQASMDQVFGAEYVSLHVRRSNRAAFNLYTSTLGY 368 HGHITSLAV RSHR+LGLA KLM A +M + F A+YVSLHVR+SNRAA +LY++TL + Sbjct: 69 HGHITSLAVKRSHRRLGLAQKLMDQASRAMIENFNAKYVSLHVRKSNRAALHLYSNTLNF 128 Query: 369 QIHDIEAKYYADGEDAYDMRKMLRQ 443 QI ++E KYYADGEDAY M++ L Q Sbjct: 129 QISEVEPKYYADGEDAYAMKRDLTQ 153
>ARD1H_HUMAN (P41227) N-terminal acetyltransferase complex ARD1 subunit homolog| A (EC 2.3.1.88) (EC 2.3.1.-) Length = 235 Score = 211 bits (537), Expect = 2e-54 Identities = 100/145 (68%), Positives = 120/145 (82%) Frame = +3 Query: 9 DDLLAMQACNLMCLPENYQMKYYFYHMLSWPQLLFVAEDYGGRIVGYVLAKMEEDPSEPC 188 +DL+ MQ CNL+CLPENYQMKYYFYH LSWPQL ++AED G+IVGYVLAKMEEDP + Sbjct: 9 EDLMNMQHCNLLCLPENYQMKYYFYHGLSWPQLSYIAEDENGKIVGYVLAKMEEDPDDVP 68 Query: 189 HGHITSLAVLRSHRKLGLATKLMSAAQASMDQVFGAEYVSLHVRRSNRAAFNLYTSTLGY 368 HGHITSLAV RSHR+LGLA KLM A +M + F A+YVSLHVR+SNRAA +LY++TL + Sbjct: 69 HGHITSLAVKRSHRRLGLAQKLMDQASRAMIENFNAKYVSLHVRKSNRAALHLYSNTLNF 128 Query: 369 QIHDIEAKYYADGEDAYDMRKMLRQ 443 QI ++E KYYADGEDAY M++ L Q Sbjct: 129 QISEVEPKYYADGEDAYAMKRDLTQ 153
>ARD1H_DICDI (P36416) N-terminal acetyltransferase complex ARD1 subunit homolog| (EC 2.3.1.-) Length = 203 Score = 181 bits (459), Expect = 2e-45 Identities = 91/151 (60%), Positives = 114/151 (75%) Frame = +3 Query: 6 IDDLLAMQACNLMCLPENYQMKYYFYHMLSWPQLLFVAEDYGGRIVGYVLAKMEEDPSEP 185 I DL++MQ NL CLPENYQMKYY YH L+WPQ FVAED G +VGYVLAK++E+ EP Sbjct: 9 IGDLMSMQNANLTCLPENYQMKYYLYHFLTWPQTSFVAEDDKGNVVGYVLAKIDEN--EP 66 Query: 186 CHGHITSLAVLRSHRKLGLATKLMSAAQASMDQVFGAEYVSLHVRRSNRAAFNLYTSTLG 365 GHITSLAVLRS RKLG+ATKLM A+ ++ +V+ A+ VSLHVR+SNRAAF+LY L Sbjct: 67 KRGHITSLAVLRSQRKLGIATKLMKQAEVALLEVYDADCVSLHVRKSNRAAFSLYHEVLK 126 Query: 366 YQIHDIEAKYYADGEDAYDMRKMLRQPVPKK 458 ++I +IE +YY D EDAY M L+ V ++ Sbjct: 127 FKIDEIEKEYYGDKEDAYSMVLYLKPEVEEE 157
>ARD1_YEAST (P07347) N-terminal acetyltransferase complex ARD1 subunit (EC| 2.3.1.-) (Arrest-defective protein 1) Length = 238 Score = 154 bits (388), Expect = 3e-37 Identities = 85/187 (45%), Positives = 113/187 (60%), Gaps = 41/187 (21%) Frame = +3 Query: 3 TIDDLLAMQACNLMCLPENYQMKYYFYHMLSWPQLLFVA-------EDY----------- 128 TI+D++ MQ NL LPENY MKYY YH+LSWP+ FVA ED Sbjct: 9 TINDIICMQNANLHNLPENYMMKYYMYHILSWPEASFVATTTTLDCEDSDEQDENDKLEL 68 Query: 129 --------------------GGRIVGYVLAKMEEDP---SEPCHGHITSLAVLRSHRKLG 239 G ++VGYVL KM +DP +EP +GHITSL+V+R++R++G Sbjct: 69 TLDGTNDGRTIKLDPTYLAPGEKLVGYVLVKMNDDPDQQNEPPNGHITSLSVMRTYRRMG 128 Query: 240 LATKLMSAAQASMDQVFGAEYVSLHVRRSNRAAFNLYTSTLGYQIHDIEAKYYADGEDAY 419 +A LM A ++ +V AEYVSLHVR+SNRAA +LY TL +++ IE YY DGEDAY Sbjct: 129 IAENLMRQALFALREVHQAEYVSLHVRQSNRAALHLYRDTLAFEVLSIEKSYYQDGEDAY 188 Query: 420 DMRKMLR 440 M+K+L+ Sbjct: 189 AMKKVLK 195
>NAT5_MOUSE (P61600) N-acetyltransferase 5 (EC 2.3.1.-)| Length = 178 Score = 105 bits (263), Expect = 1e-22 Identities = 62/158 (39%), Positives = 87/158 (55%), Gaps = 6/158 (3%) Frame = +3 Query: 3 TIDDLLAMQACNLMCLPENYQMKYYFYHMLSWPQLLFVAEDYGGRIVGYVLAKMEEDPS- 179 T DDL NL L E Y + +Y ++ WP+ VAE GG ++GY++ K E + Sbjct: 8 TCDDLFRFNNINLDPLTETYGIPFYLQYLAHWPEYFIVAEAPGGELMGYIMGKAEGSVAR 67 Query: 180 EPCHGHITSLAVLRSHRKLGLATKLMSAAQASMDQVFGAEYVSLHVRRSNRAAFNLYTST 359 E HGH+T+L+V R+LGLA KLM + + + G +V L VR SN+ A N+Y Sbjct: 68 EEWHGHVTALSVAPEFRRLGLAAKLMELLE-EISERKGGFFVDLFVRVSNQVAVNMY-KQ 125 Query: 360 LGYQIHDIEAKYYA-----DGEDAYDMRKMLRQPVPKK 458 LGY ++ +YY+ EDAYDMRK L + KK Sbjct: 126 LGYSVYRTVIEYYSASNGEPDEDAYDMRKALSRDTEKK 163
>NAT5_HUMAN (P61599) N-acetyltransferase 5 (EC 2.3.1.-)| Length = 178 Score = 105 bits (263), Expect = 1e-22 Identities = 62/158 (39%), Positives = 87/158 (55%), Gaps = 6/158 (3%) Frame = +3 Query: 3 TIDDLLAMQACNLMCLPENYQMKYYFYHMLSWPQLLFVAEDYGGRIVGYVLAKMEEDPS- 179 T DDL NL L E Y + +Y ++ WP+ VAE GG ++GY++ K E + Sbjct: 8 TCDDLFRFNNINLDPLTETYGIPFYLQYLAHWPEYFIVAEAPGGELMGYIMGKAEGSVAR 67 Query: 180 EPCHGHITSLAVLRSHRKLGLATKLMSAAQASMDQVFGAEYVSLHVRRSNRAAFNLYTST 359 E HGH+T+L+V R+LGLA KLM + + + G +V L VR SN+ A N+Y Sbjct: 68 EEWHGHVTALSVAPEFRRLGLAAKLMELLE-EISERKGGFFVDLFVRVSNQVAVNMY-KQ 125 Query: 360 LGYQIHDIEAKYYA-----DGEDAYDMRKMLRQPVPKK 458 LGY ++ +YY+ EDAYDMRK L + KK Sbjct: 126 LGYSVYRTVIEYYSASNGEPDEDAYDMRKALSRDTEKK 163
>NAT3_YEAST (Q06504) N-terminal acetyltransferase B complex subunit NAT3 (EC| 2.3.1.88) (NatB complex subunit NAT3) (NatB Nalpha terminal acetyltransferase 3) Length = 195 Score = 75.9 bits (185), Expect = 1e-13 Identities = 46/143 (32%), Positives = 73/143 (51%), Gaps = 7/143 (4%) Frame = +3 Query: 12 DLLAMQACNLMCLPENYQMKYYFYHMLSWPQLLFVAED------YGGRIVGYVLAKMEED 173 DL NL L EN+ +++YF +M+ WP L F + + + I GY++AK E Sbjct: 11 DLFKTNNVNLDILTENFPLEFYFEYMIIWPDLFFKSSEMTVDPTFKHNISGYMMAKTEGK 70 Query: 174 PSEPCHGHITSLAVLRSHRKLGLATKLMSAAQASMDQV-FGAEYVSLHVRRSNRAAFNLY 350 +E H HIT++ V R++ LA+KL + + D + ++ L V+ +N+ A LY Sbjct: 71 TTE-WHTHITAVTVAPRFRRISLASKLCNTLETMTDVMPHEVNFIDLFVKCNNQLAIKLY 129 Query: 351 TSTLGYQIHDIEAKYYADGEDAY 419 LGY ++ YY ED Y Sbjct: 130 -EKLGYSVYRRVVGYYNSAEDGY 151
>ARD1H_LEIDO (Q05885) N-terminal acetyltransferase complex ARD1 subunit homolog| (EC 2.3.1.-) Length = 186 Score = 67.0 bits (162), Expect = 5e-11 Identities = 50/157 (31%), Positives = 75/157 (47%), Gaps = 10/157 (6%) Frame = +3 Query: 3 TIDDLLAMQACNLMCLPENYQMKYYFYHMLSWPQLLFVAEDYGGRI-VGYVLAKMEEDPS 179 T+ D L NL L E Y +Y ++ WP+ + I + Y L K E Sbjct: 8 TLCDTLQFNFVNLDQLTETYNTSFYGEYVTHWPEYQRMCVHPTTNIPMAYTLGKAEGQ-G 66 Query: 180 EPCHGHITSLAVLRSHRKLGLATKLMSAAQASMDQVFGAEYVSLHVRRSNRAAFNLYTST 359 E HGH+++++V + R++ L LM+ + V A +V L VR+SN+ A ++Y Sbjct: 67 EDYHGHVSAVSVAPTFRRVALGETLMAELAQMSELVHNAYFVDLFVRKSNQVAQDMY-HR 125 Query: 360 LGYQIHDIEAKYY-ADG--------EDAYDMRKMLRQ 443 LGY ++ YY DG EDA DMR LR+ Sbjct: 126 LGYIVYRTVLNYYHGDGPKGPFKSDEDALDMRLALRR 162
>Y1530_METJA (Q58925) Hypothetical acetyltransferase MJ1530 (EC 2.3.1.-)| Length = 156 Score = 65.9 bits (159), Expect = 1e-10 Identities = 43/112 (38%), Positives = 58/112 (51%) Frame = +3 Query: 96 WPQLLFVAEDYGGRIVGYVLAKMEEDPSEPCHGHITSLAVLRSHRKLGLATKLMSAAQAS 275 +P +VAE GR+VGY+L M+ +GHI SLAV + R LG+ T L+ + Sbjct: 38 YPNCFYVAE-IDGRVVGYILGSMDWG-----NGHIISLAVKKECRGLGIGTALLKTLENY 91 Query: 276 MDQVFGAEYVSLHVRRSNRAAFNLYTSTLGYQIHDIEAKYYADGEDAYDMRK 431 + Y+ L VR SN A Y +GY+ + KYY DGEDA M K Sbjct: 92 YFNIANCNYIVLEVRVSNVLARRFY-YRMGYRDRKLLPKYYEDGEDAILMIK 142
>MAK3_YEAST (Q03503) L-A virus GAG protein N-acetyltransferase (EC 2.3.1.-)| (Maintenance of killer protein 3) Length = 176 Score = 51.2 bits (121), Expect = 3e-06 Identities = 37/130 (28%), Positives = 61/130 (46%), Gaps = 4/130 (3%) Frame = +3 Query: 48 LPENYQMKYYFYHMLSWPQLLFVAEDYGGRI----VGYVLAKMEEDPSEPCHGHITSLAV 215 L E Y + Y Y + WP+L ++A D +G ++ KM+ + G+I LAV Sbjct: 27 LSEPYSIYVYRYFLNQWPELTYIAVDNKSGTPNIPIGCIVCKMDPHRNVRLRGYIGMLAV 86 Query: 216 LRSHRKLGLATKLMSAAQASMDQVFGAEYVSLHVRRSNRAAFNLYTSTLGYQIHDIEAKY 395 ++R G+A KL+ A M + + + L N AA NLY +G+ +Y Sbjct: 87 ESTYRGHGIAKKLVEIAIDKMQREH-CDEIMLETEVENSAALNLYEG-MGFIRMKRMFRY 144 Query: 396 YADGEDAYDM 425 Y + DA+ + Sbjct: 145 YLNEGDAFKL 154
>SAN_DROME (Q9NHD5) Probable acetyltransferase san (EC 2.3.1.-) (Protein| separation anxiety) Length = 184 Score = 46.6 bits (109), Expect = 7e-05 Identities = 37/152 (24%), Positives = 74/152 (48%), Gaps = 2/152 (1%) Frame = +3 Query: 3 TIDDLLAMQACNLMCLPENYQMKYYFYHMLSWPQLLFVAEDYGGRIVGYVLAKMEEDPSE 182 T ++ ++ N + P +Y K+Y +L +L +A Y +VG V +++ ++ Sbjct: 12 TPHNIKQLKKLNTVVFPVSYNDKFYV-DVLEAGELAKLAY-YNDIVVGAVCCRIDNTENQ 69 Query: 183 PCHGHITSLAVLRSHRKLGLATKLMSAAQASMDQVFGAEYVSLHVRRSNRAAFNLYTSTL 362 +I +L L +R+LG+ T + ++ + + LHV+ +N A Y Sbjct: 70 R-RLYIMTLGCLSPYRRLGIGTVMFEHIMNFAEKDGNFDSIFLHVQINNNGAIEFY-KKF 127 Query: 363 GYQIHDIEAKYY--ADGEDAYDMRKMLRQPVP 452 G++I D + +YY + DA+ ++K LR+ P Sbjct: 128 GFEIVDTKEQYYKRIEPADAHVLQKTLRRTAP 159
>GATB_METMA (Q8PXJ0) Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B| (EC 6.3.5.-) (Asp/Glu-ADT subunit B) Length = 495 Score = 35.4 bits (80), Expect = 0.16 Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 2/67 (2%) Frame = +3 Query: 48 LPENYQMKYYFYHMLSWPQLLFVAEDYGGRIVGYVLAKMEEDPSEPCH-GHI-TSLAVLR 221 LP+ +Q+ Y Y ++S +++ ED G +VG A MEEDP + H G I S VL Sbjct: 92 LPKGFQVTQYDYPIVSKGKVVIEGED-GEHVVGITRAHMEEDPGKLVHIGSIEKSKGVLI 150 Query: 222 SHRKLGL 242 + + G+ Sbjct: 151 DYNRSGM 157
>GATB_METAC (Q8THJ0) Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B| (EC 6.3.5.-) (Asp/Glu-ADT subunit B) Length = 495 Score = 35.4 bits (80), Expect = 0.16 Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 2/67 (2%) Frame = +3 Query: 48 LPENYQMKYYFYHMLSWPQLLFVAEDYGGRIVGYVLAKMEEDPSEPCH-GHI-TSLAVLR 221 LP+ +Q+ Y Y ++S +++ ED G +VG A MEEDP + H G I S VL Sbjct: 92 LPKGFQVTQYDYPIVSKGKVVIEGED-GEHVVGITRAHMEEDPGKLVHIGSIGKSKGVLI 150 Query: 222 SHRKLGL 242 + + G+ Sbjct: 151 DYNRSGM 157
>ECTA_STRCH (Q6QUZ0) L-2,4-diaminobutyric acid acetyltransferase (EC 2.3.1.-)| (DABA acetyltransferase) Length = 176 Score = 32.3 bits (72), Expect = 1.4 Identities = 32/103 (31%), Positives = 48/103 (46%), Gaps = 4/103 (3%) Frame = +3 Query: 114 VAEDYGGRIVGYVLAKMEEDPSEPCHGHITSLAVLRSHRKLGLATKLMSA--AQASMDQV 287 VA G + +V + P P + +AV ++HR GLA L+ A A+ + DQV Sbjct: 60 VARGENGEPIAFVTGYVR--PDRPQTLVVWQVAVDQAHRGKGLAAALLDALTARVAADQV 117 Query: 288 FGAEYVSLHVRRSNRAAFNLYTSTLGYQIHDI--EAKYYADGE 410 + V + N A+ L+TS Q HD+ E + DGE Sbjct: 118 LSS--VETTITPDNTASDRLFTSYA--QRHDVALEKEVLFDGE 156
>AACC1_PSEAE (P23181) Gentamicin 3'-acetyltransferase (EC 2.3.1.60) (Gentamicin| acetyltransferase I) (Aminoglycoside N(3')-acetyltransferase I) (AAC(3)-I) Length = 177 Score = 32.3 bits (72), Expect = 1.4 Identities = 25/81 (30%), Positives = 38/81 (46%) Frame = +3 Query: 111 FVAEDYGGRIVGYVLAKMEEDPSEPCHGHITSLAVLRSHRKLGLATKLMSAAQASMDQVF 290 F E G + YVL + E+ SE +I LAV HR+ G+AT L++ + + Sbjct: 82 FDQEAVVGALAAYVLPRFEQPRSEI---YIYDLAVSGEHRRQGIATALINLLKHEAN-AL 137 Query: 291 GAEYVSLHVRRSNRAAFNLYT 353 GA + + + A LYT Sbjct: 138 GAYVIYVQADYGDDPAVALYT 158
>Y2688_MYCBO (P63426) Hypothetical protein Mb2688| Length = 156 Score = 31.6 bits (70), Expect = 2.3 Identities = 28/100 (28%), Positives = 45/100 (45%) Frame = +3 Query: 78 FYHMLSWPQLLFVAEDYGGRIVGYVLAKMEEDPSEPCHGHITSLAVLRSHRKLGLATKLM 257 F L+ P+ + + GRIVGY + +D ++ L +L + G A LM Sbjct: 41 FAEYLTDPRRAILTARHDGRIVGYAMLIRGDDRDV----ELSKLYLLPGYHGTGAAAALM 96 Query: 258 SAAQASMDQVFGAEYVSLHVRRSNRAAFNLYTSTLGYQIH 377 A+ +GA V L V + N+ A Y T G++I+ Sbjct: 97 HKVLATAAD-WGALRVWLGVNQKNQRAQRFYAKT-GFKIN 134
>Y2669_MYCTU (P63425) Hypothetical protein Rv2669/MT2743| Length = 156 Score = 31.6 bits (70), Expect = 2.3 Identities = 28/100 (28%), Positives = 45/100 (45%) Frame = +3 Query: 78 FYHMLSWPQLLFVAEDYGGRIVGYVLAKMEEDPSEPCHGHITSLAVLRSHRKLGLATKLM 257 F L+ P+ + + GRIVGY + +D ++ L +L + G A LM Sbjct: 41 FAEYLTDPRRAILTARHDGRIVGYAMLIRGDDRDV----ELSKLYLLPGYHGTGAAAALM 96 Query: 258 SAAQASMDQVFGAEYVSLHVRRSNRAAFNLYTSTLGYQIH 377 A+ +GA V L V + N+ A Y T G++I+ Sbjct: 97 HKVLATAAD-WGALRVWLGVNQKNQRAQRFYAKT-GFKIN 134
>ECTA_STRAW (Q829L3) L-2,4-diaminobutyric acid acetyltransferase (EC 2.3.1.-)| (DABA acetyltransferase) Length = 179 Score = 30.8 bits (68), Expect = 4.0 Identities = 21/81 (25%), Positives = 37/81 (45%) Frame = +3 Query: 114 VAEDYGGRIVGYVLAKMEEDPSEPCHGHITSLAVLRSHRKLGLATKLMSAAQASMDQVFG 293 VA G VG++ A + P P + +AV ++R GLA +++ A + +G Sbjct: 63 VARAADGTPVGFITAYVR--PERPHTLLVWQVAVDAAYRGRGLAARMLDGLTARVTDEYG 120 Query: 294 AEYVSLHVRRSNRAAFNLYTS 356 + + N A+ L+TS Sbjct: 121 VTGIETTISPGNTASERLFTS 141
>CWC24_SCHPO (Q9P6R8) Pre-mRNA-splicing factor cwc24 (Complexed with cdc5| protein 24) (Cell cycle control protein cwf24) Length = 533 Score = 30.4 bits (67), Expect = 5.2 Identities = 27/103 (26%), Positives = 50/103 (48%) Frame = +3 Query: 48 LPENYQMKYYFYHMLSWPQLLFVAEDYGGRIVGYVLAKMEEDPSEPCHGHITSLAVLRSH 227 L +Y K+Y +L P +A + + VG + + + ED S ++T L VL + Sbjct: 400 LEASYSDKFYRL-VLKNPDYARIAT-FEDKFVGAISSLVAEDNSL----YVTVLCVLAPY 453 Query: 228 RKLGLATKLMSAAQASMDQVFGAEYVSLHVRRSNRAAFNLYTS 356 R LG+ + L+ + + + +SLHV+ +N + YT+ Sbjct: 454 RCLGIGSLLIDHVKKTAINN-NIDRISLHVQTTNESVIKWYTA 495
>YLK6_CAEEL (P41954) Hypothetical protein D1044.6| Length = 1009 Score = 29.6 bits (65), Expect = 8.8 Identities = 34/119 (28%), Positives = 49/119 (41%), Gaps = 3/119 (2%) Frame = +3 Query: 12 DLLAMQACNLMCLPENYQMKYYFYHMLSWPQLLFVAEDYGGRIVGYVLAKMEEDPSEPC- 188 D + QA NL L +YF L WP L+F+ G+ A+ + C Sbjct: 641 DEIDYQAINLNRLKSGIVYPFYFSDGLYWP-LVFLKSSKNGK----PEAQRHVEALTSCK 695 Query: 189 --HGHITSLAVLRSHRKLGLATKLMSAAQASMDQVFGAEYVSLHVRRSNRAAFNLYTST 359 G S +L + ++ ATK A A D + A+Y + R SNRA F + T Sbjct: 696 SFSGKYASRYLLTTTKEEDSATKKFEDAYADSDGDW-ADYSTKPGRFSNRAGFKPHYDT 753
>BEM1_YEAST (P29366) Bud emergence protein 1 (Suppressor of RHO3 protein 1)| Length = 551 Score = 29.6 bits (65), Expect = 8.8 Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 1/79 (1%) Frame = +3 Query: 390 KYYADGEDAYDMRKMLRQPVPKKXXXXXXAGGGCCSHDALPAPTGSSP-TTASPEKKADS 566 +YY +D YD++ L P + AGG S +P G P T S KK Sbjct: 316 RYY---QDFYDLQVQLLDAFPAEAGKLRDAGGQW-SKRIMPYIPGPVPYVTNSITKKRK- 370 Query: 567 *EERHFMCEELLNLPDYMN 623 E+ + +L+NLPDY++ Sbjct: 371 -EDLNIYVADLVNLPDYIS 388
>SEC7_YEAST (P11075) Protein transport protein SEC7| Length = 2009 Score = 29.6 bits (65), Expect = 8.8 Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 2/66 (3%) Frame = +3 Query: 162 MEEDPSEPCHGH--ITSLAVLRSHRKLGLATKLMSAAQASMDQVFGAEYVSLHVRRSNRA 335 +EED S CHG + ++ + + L AQA++ Q+ + Y + +++S + Sbjct: 375 LEEDSSSLCHGASLLKAIRTIYNVFVFSLNPSNQGIAQATLTQIISSVYDKIDLKQSTSS 434 Query: 336 AFNLYT 353 A +L T Sbjct: 435 AVSLST 440 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 59,793,920 Number of Sequences: 219361 Number of extensions: 1051845 Number of successful extensions: 3168 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 3061 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3156 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6655306086 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
