ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags10d12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1DSPP_HUMAN (Q9NZW4) Dentin sialophosphoprotein precursor [Contai... 32 1.0
2PUR72_BRAJA (Q89W81) Putative phosphoribosylaminoimidazole-succi... 32 1.8
3ENV_HV1Z2 (P12487) Envelope polyprotein GP160 precursor [Contain... 29 8.7
4AAC_ACTUT (P29958) Aculeacin A acylase precursor (EC 3.5.1.-) [C... 29 8.7

>DSPP_HUMAN (Q9NZW4) Dentin sialophosphoprotein precursor [Contains: Dentin|
           phosphoprotein (Dentin phosphophoryn) (DPP); Dentin
           sialoprotein (DSP)]
          Length = 1253

 Score = 32.3 bits (72), Expect = 1.0
 Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 2/85 (2%)
 Frame = +2

Query: 197 ANDDDEEGVTLRKKKGISPADSAELGQGKKTPSPELGEVVTSDMSGRRTISRSSDSGRMG 376
           AN + +   + R     +  +S + G G  +   E  +   SD +     S S+ +G  G
Sbjct: 477 ANSESDNNSSSRGDASYNSDESKDNGNGSDSKGAEDDD---SDSTSDTNNSDSNGNGNNG 533

Query: 377 ND--DKEDLELGKGDYMDVDRGEAS 445
           ND  DK D   GK D  D D  ++S
Sbjct: 534 NDDNDKSDSGKGKSDSSDSDSSDSS 558



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>PUR72_BRAJA (Q89W81) Putative phosphoribosylaminoimidazole-succinocarboxamide|
           synthase B (EC 6.3.2.6) (SAICAR synthetase 2)
          Length = 304

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
 Frame = +2

Query: 218 GVTLRKKKGISPADSA-ELGQGKKTPSPELGEVVTSDMSGRRTISRSSDSGRMGNDDKED 394
           G  L +++GI  AD+  E G+ K      + EV+T D S    +          + DK+ 
Sbjct: 196 GEELAREQGIIIADTKFEFGRDKDGRIILIDEVMTPDSSRFWAVDAYKPGQPQASFDKQP 255

Query: 395 LELGKGDYMDVDRGEASVNGSANRP 469
           L     DY+DV+R     NG A  P
Sbjct: 256 LR----DYLDVERRAGRWNGDAPPP 276



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>ENV_HV1Z2 (P12487) Envelope polyprotein GP160 precursor [Contains: Exterior|
           membrane glycoprotein (GP120); Transmembrane
           glycoprotein (GP41)]
          Length = 853

 Score = 29.3 bits (64), Expect = 8.7
 Identities = 25/91 (27%), Positives = 40/91 (43%), Gaps = 1/91 (1%)
 Frame = +2

Query: 170 NISTSRWAGANDDDEEGVTLRKKKGISPADSAELGQGKKTPSPEL-GEVVTSDMSGRRTI 346
           +IS S WA + + D++ +TL+ +  I    +   G GK   +P + G++  S       +
Sbjct: 394 DISKSEWANSTESDDKPITLQCR--IKQIINMWQGVGKAMYAPPIEGQINCSSNITGLLL 451

Query: 347 SRSSDSGRMGNDDKEDLELGKGDYMDVDRGE 439
           +R    G   N   E    G GD  D  R E
Sbjct: 452 TR---DGGTNNSSNETFRPGGGDMRDNWRSE 479



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>AAC_ACTUT (P29958) Aculeacin A acylase precursor (EC 3.5.1.-) [Contains:|
           Aculeacin A small subunit; Aculeacin A large subunit]
          Length = 786

 Score = 29.3 bits (64), Expect = 8.7
 Identities = 18/36 (50%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
 Frame = -3

Query: 534 RWAGFTGSGVSDLR-TSSSESEDGRLAEPLTLASPR 430
           RW G TG   +D+R TSS+++ D R+AE L L  PR
Sbjct: 88  RWFGATGPDDADVRTTSSTQAIDDRVAERL-LEGPR 122


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 74,991,396
Number of Sequences: 219361
Number of extensions: 1385404
Number of successful extensions: 3843
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3835
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5044307840
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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